400 results on '"DiSpirito A"'
Search Results
2. Impact of E. muris infection on B. burgdorferi–induced joint pathology in mice
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Jesse L. Bonin, Steven R. Torres, Ashley L. Marcinkiewicz, Gerald E. Duhamel, Xiuli Yang, Utpal Pal, Julia M. DiSpirito, Tristan A. Nowak, Yi-Pin Lin, and Katherine C. MacNamara
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infection ,Borrelia (Borreliella) burgdorferi ,hematopoiesis ,inflammation ,Ehrlichia ,Immunologic diseases. Allergy ,RC581-607 - Abstract
Tick-borne infections are increasing in the United States and around the world. The most common tick-borne disease in the United States is Lyme disease caused by infection with the spirochete Borrelia burgdorferi (Bb), and pathogenesis varies from subclinical to severe. Bb infection is transmitted by Ixodes ticks, which can carry multiple other microbial pathogens, including Ehrlichia species. To address how the simultaneous inoculation of a distinct pathogen impacted the course of Bb-induced disease, we used C57BL/6 (B6) mice which are susceptible to Bb infection but develop only mild joint pathology. While infection of B6 mice with Bb alone resulted in minimal inflammatory responses, mice co-infected with both Bb and the obligate intracellular pathogen Ehrlichia muris (Em) displayed hematologic changes, inflammatory cytokine production, and emergency myelopoiesis similar to what was observed in mice infected only with Em. Moreover, infection of B6 mice with Bb alone resulted in no detectable joint inflammation, whereas mice co-infected with both Em and Bb exhibited significant inflammation of the ankle joint. Our findings support the concept that co-infection with Ehrlichia can exacerbate inflammation, resulting in more severe Bb-induced disease.
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- 2024
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3. ARBM101 (Methanobactin SB2) Drains Excess Liver Copper via Biliary Excretion in Wilson’s Disease Rats
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Einer, Claudia, Munk, Ditte Emilie, Park, Eok, Akdogan, Banu, Nagel, Judith, Lichtmannegger, Josef, Eberhagen, Carola, Rieder, Tamara, Vendelbo, Mikkel H., Michalke, Bernhard, Wimmer, Ralf, Blutke, Andreas, Feuchtinger, Annette, Dershwitz, Philip, DiSpirito, Ana M., Islam, Tawhidul, Castro, Rui E., Min, Byong-Keol, Kim, TaeWon, Choi, Seoyoung, Kim, Dasol, Jung, Chunwon, Lee, Hongjae, Park, Dongsik, Im, Weonbin, Eun, So-Young, Cho, You-Hee, Semrau, Jeremy D., Rodrigues, Cecília M.P., Hohenester, Simon, Damgaard Sandahl, Thomas, DiSpirito, Alan A., and Zischka, Hans
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- 2023
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4. Formative Evaluation of Rehabilitative Post-surgical Care for Children in Tanzania: “They Arrive with Sorrows, but they Leave Happily”
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Kiesel, Lisa R., Biggs, Jennifer, Hartwig, Kari, DiSpirito, Keira, and Maisano, Kristen
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- 2022
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5. Real-time whole-brain imaging of hemodynamics and oxygenation at micro-vessel resolution with ultrafast wide-field photoacoustic microscopy
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Zhu, Xiaoyi, Huang, Qiang, DiSpirito, Anthony, Vu, Tri, Rong, Qiangzhou, Peng, Xiaorui, Sheng, Huaxin, Shen, Xiling, Zhou, Qifa, Jiang, Laiming, Hoffmann, Ulrike, and Yao, Junjie
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- 2022
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6. Real-time whole-brain imaging of hemodynamics and oxygenation at micro-vessel resolution with ultrafast wide-field photoacoustic microscopy
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Xiaoyi Zhu, Qiang Huang, Anthony DiSpirito, Tri Vu, Qiangzhou Rong, Xiaorui Peng, Huaxin Sheng, Xiling Shen, Qifa Zhou, Laiming Jiang, Ulrike Hoffmann, and Junjie Yao
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Applied optics. Photonics ,TA1501-1820 ,Optics. Light ,QC350-467 - Abstract
The ultrafast wide-field photoacoustic microscopy integrates novel light source, fast scanning mechanism, and machine learning enhancement, which allows high-speed tracking of whole-brain functions in action at capillary level.
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- 2022
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7. Impact of E. muris infection on B. burgdorferi–induced joint pathology in mice.
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Bonin, Jesse L., Torres, Steven R., Marcinkiewicz, Ashley L., Duhamel, Gerald E., Yang, Xiuli, Pal, Utpal, DiSpirito, Julia M., Nowak, Tristan A., Lin, Yi-Pin, and MacNamara, Katherine C.
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ANKLE joint ,EHRLICHIOSIS ,TICK-borne diseases ,BORRELIA burgdorferi ,DISEASE progression ,LYME disease - Abstract
Tick-borne infections are increasing in the United States and around the world. The most common tick-borne disease in the United States is Lyme disease caused by infection with the spirochete Borrelia burgdorferi (Bb), and pathogenesis varies from subclinical to severe. Bb infection is transmitted by Ixodes ticks, which can carry multiple other microbial pathogens, including Ehrlichia species. To address how the simultaneous inoculation of a distinct pathogen impacted the course of Bb-induced disease, we used C57BL/6 (B6) mice which are susceptible to Bb infection but develop only mild joint pathology. While infection of B6 mice with Bb alone resulted in minimal inflammatory responses, mice co-infected with both Bb and the obligate intracellular pathogen Ehrlichia muris (Em) displayed hematologic changes, inflammatory cytokine production, and emergency myelopoiesis similar to what was observed in mice infected only with Em. Moreover, infection of B6 mice with Bb alone resulted in no detectable joint inflammation, whereas mice co-infected with both Em and Bb exhibited significant inflammation of the ankle joint. Our findings support the concept that co-infection with Ehrlichia can exacerbate inflammation, resulting in more severe Bb-induced disease. [ABSTRACT FROM AUTHOR]
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- 2024
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8. Evidence for methanobactin “Theft” and novel chalkophore production in methanotrophs: impact on methanotrophic-mediated methylmercury degradation
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Kang-Yun, Christina S., Liang, Xujun, Dershwitz, Philip, Gu, Wenyu, Schepers, Aloys, Flatley, Andrew, Lichtmannegger, Josef, Zischka, Hans, Zhang, Lijie, Lu, Xia, Gu, Baohua, Ledesma, Joshua C., Pelger, Daly J., DiSpirito, Alan A., and Semrau, Jeremy D.
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- 2022
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9. Spectroscopic and computational investigations of organometallic complexation of group 12 transition metals by methanobactins from Methylocystis sp. SB2
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Eckert, Peter, Johs, Alexander, Semrau, Jeremy D., DiSpirito, Alan A., Richardson, Jocelyn, Sarangi, Ritimukta, Herndon, Elizabeth, Gu, Baohua, and Pierce, Eric M.
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- 2021
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10. Multiple Mechanisms for Copper Uptake by Methylosinus trichosporium OB3b in the Presence of Heterologous Methanobactin
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Peng Peng, Wenyu Gu, Alan A. DiSpirito, and Jeremy D. Semrau
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TonB-dependent transporter ,copper ,methanobactin ,methanotroph ,Microbiology ,QR1-502 - Abstract
ABSTRACT Methanotrophs require copper for their activity as it plays a critical role in the oxidation of methane to methanol. To sequester copper, some methanotrophs secrete a copper-binding compound termed methanobactin (MB). MB, after binding copper, is reinternalized via a specific outer membrane TonB-dependent transporter (TBDT). Methylosinus trichosporium OB3b has two such TBDTs (MbnT1 and MbnT2) that enable M. trichosporium OB3b to take up not only its own MB (MB-OB3b) but also heterologous MB produced from other methanotrophs, e.g., MB of Methylocystis sp. strain SB2 (MB-SB2). Here, we show that uptake of copper in the presence of heterologous MB-SB2 can either be achieved by initiating transcription of mbnT2 or by using its own MB-OB3b to extract copper from MB-SB2. Transcription of mbnT2 is mediated by the N-terminal signaling domain of MbnT2 together with an extracytoplasmic function sigma factor and an anti-sigma factor encoded by mbnI2 and mbnR2, respectively. Deletion of mbnI2R2 or excision of the N-terminal region of MbnT2 abolished induction of mbnT2. However, copper uptake from MB-SB2 was still observed in M. trichosporium OB3b mutants that were defective in MbnT2 induction/function, suggesting another mechanism for uptake copper-loaded MB-SB2. Additional deletion of MB-OB3b synthesis genes in the M. trichosporium OB3b mutants defective in MbnT2 induction/function disrupted their ability to take up copper in the presence of MB-SB2, indicating a role of MB-OB3b in copper extraction from MB-SB2. IMPORTANCE Methanotrophs play a critical role in the global carbon cycle, as well as in future strategies for mitigating climate change through their consumption of methane, a trace atmospheric gas much more potent than carbon dioxide in global warming potential. Copper uptake is critical for methanotrophic activity, and here, we show different approaches for copper uptake. This study expands our knowledge and understanding of how methanotrophs collect and compete for copper, and such information may be useful in future manipulation of methanotrophs for a variety of environmental and industrial applications.
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- 2022
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11. Deep image prior for undersampling high-speed photoacoustic microscopy
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Vu, Tri, DiSpirito, Anthony, III, Li, Daiwei, Wang, Zixuan, Zhu, Xiaoyi, Chen, Maomao, Jiang, Laiming, Zhang, Dong, Luo, Jianwen, Zhang, Yu Shrike, Zhou, Qifa, Horstmeyer, Roarke, and Yao, Junjie
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- 2021
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12. Heterologous Biosynthesis of Methanobactin from Methylocystis sp. Strain SB2 in Methylosinus trichosporium OB3b.
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Peng, Peng, DiSpirito, Alan A., Lewis, Braden J., Nott, Joel D., and Semrau, Jeremy D.
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- 2024
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13. Virtual‐point‐based deconvolution for optical‐resolution photoacoustic microscopy.
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Yao, Rui, DiSpirito, Anthony, Jang, Hongje, McGarraugh, Colton Thomas, Nguyen, Van Tu, Shi, Lingyan, and Yao, Junjie
- Abstract
Optical‐resolution photoacoustic microscopy (OR‐PAM) has been increasingly utilized for in vivo imaging of biological tissues, offering structural, functional, and molecular information. In OR‐PAM, it is often necessary to make a trade‐off between imaging depth, lateral resolution, field of view, and imaging speed. To improve the lateral resolution without sacrificing other performance metrics, we developed a virtual‐point‐based deconvolution algorithm for OR‐PAM (VP‐PAM). VP‐PAM has achieved a resolution improvement ranging from 43% to 62.5% on a single‐line target. In addition, it has outperformed Richardson‐Lucy deconvolution with 15 iterations in both structural similarity index and peak signal‐to‐noise ratio on an OR‐PAM image of mouse brain vasculature. When applied to an in vivo glass frog image obtained by a deep‐penetrating OR‐PAM system with compromised lateral resolution, VP‐PAM yielded enhanced resolution and contrast with better‐resolved microvessels. [ABSTRACT FROM AUTHOR]
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- 2024
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14. Pharmacological Inhibition of MALT1 Ameliorates Autoimmune Pathogenesis and Can Be Uncoupled From Effects on Regulatory T-Cells
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Subhabrata Biswas, Aditi Chalishazar, Ynes Helou, Joanna DiSpirito, Brian DeChristopher, Devin Chatterjee, Leidy Merselis, Benjamin Vincent, John G. Monroe, Dania Rabah, and Andrew J. Long
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MALT1 inhibitor ,autoimmunity ,regulatory T-cell ,collagen-induced arthritis ,IL-2 ,Immunologic diseases. Allergy ,RC581-607 - Abstract
MALT1 forms part of a central signaling node downstream of immunoreceptor tyrosine-based activation motif (ITAM)-containing receptors, across a broad range of immune cell subsets, and regulates NF-κB driven transcriptional responses via dual scaffolding-protease activity. Allosteric inhibition of MALT1 activity has demonstrated benefit in animal models of inflammation. However, development of MALT1 inhibitors to treat autoimmune and inflammatory diseases (A&ID) has been hindered by reports linking MALT1 inhibition and genetic loss-of-function to reductions in regulatory T-cell (Treg) numbers and development of auto-inflammatory syndromes. Using an allosteric MALT1 inhibitor, we investigated the consequence of pharmacological inhibition of MALT1 on proinflammatory cells compared to regulatory T-cells. Consistent with its known role in ITAM-driven responses, MALT1 inhibition suppressed proinflammatory cytokine production from activated human T-cells and monocyte-derived macrophages, and attenuated B-cell proliferation. Oral administration of a MALT1 inhibitor reduced disease severity and synovial cytokine production in a rat collagen-induced arthritis model. Interestingly, reduction in splenic Treg numbers was less pronounced in the context of inflammation compared with naïve animals. Additionally, in the context of the disease model, we observed an uncoupling of anti-inflammatory effects of MALT1 inhibition from Treg reduction, with lower systemic concentrations of inhibitor needed to reduce disease severity compared to that required to reduce Treg numbers. MALT1 inhibition did not affect suppressive function of human Tregs in vitro. These data indicate that anti-inflammatory efficacy can be achieved with MALT1 inhibition without impacting the number or function of Tregs, further supporting the potential of MALT1 inhibition in the treatment of autoimmune disease.
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- 2022
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15. A High-Calorie Diet Aggravates Mitochondrial Dysfunction and Triggers Severe Liver Damage in Wilson Disease Rats
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Einer, Claudia, Leitzinger, Christin, Lichtmannegger, Josef, Eberhagen, Carola, Rieder, Tamara, Borchard, Sabine, Wimmer, Ralf, Denk, Gerald, Popper, Bastian, Neff, Frauke, Polishchuk, Elena V., Polishchuk, Roman S., Hauck, Stefanie M., von Toerne, Christine, Müller, Jennifer-Christin, Karst, Uwe, Baral, Bipin S., DiSpirito, Alan A., Kremer, Andreas E., Semrau, Jeremy, Weiss, Karl Heinz, Hohenester, Simon, and Zischka, Hans
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- 2019
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16. Deep image prior for undersampling high-speed photoacoustic microscopy
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Tri Vu, Anthony DiSpirito, III, Daiwei Li, Zixuan Wang, Xiaoyi Zhu, Maomao Chen, Laiming Jiang, Dong Zhang, Jianwen Luo, Yu Shrike Zhang, Qifa Zhou, Roarke Horstmeyer, and Junjie Yao
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Convolutional neural network ,Deep image prior ,Deep learning ,High-speed imaging ,Photoacoustic microscopy ,Raster scanning ,Physics ,QC1-999 ,Acoustics. Sound ,QC221-246 ,Optics. Light ,QC350-467 - Abstract
Photoacoustic microscopy (PAM) is an emerging imaging method combining light and sound. However, limited by the laser’s repetition rate, state-of-the-art high-speed PAM technology often sacrifices spatial sampling density (i.e., undersampling) for increased imaging speed over a large field-of-view. Deep learning (DL) methods have recently been used to improve sparsely sampled PAM images; however, these methods often require time-consuming pre-training and large training dataset with ground truth. Here, we propose the use of deep image prior (DIP) to improve the image quality of undersampled PAM images. Unlike other DL approaches, DIP requires neither pre-training nor fully-sampled ground truth, enabling its flexible and fast implementation on various imaging targets. Our results have demonstrated substantial improvement in PAM images with as few as 1.4 % of the fully sampled pixels on high-speed PAM. Our approach outperforms interpolation, is competitive with pre-trained supervised DL method, and is readily translated to other high-speed, undersampling imaging modalities.
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- 2021
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17. Caregivers' perspectives of community acceptance before and after surgical treatment for their child's disability.
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Johnson, Kali, Hartwig, Kari, Maisano, Kristen, Crusan, Ambria, Biggs, Jennifer, and DiSpirito, Keira
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CONTRACTURE (Pathology) ,CHILDREN with disabilities ,HEALTH attitudes ,RESEARCH funding ,INTERVIEWING ,PARENT-child relationships ,FUNCTIONAL assessment ,COMMUNITIES ,TREATMENT effectiveness ,EMOTIONS ,DESCRIPTIVE statistics ,OPERATIVE surgery ,THEMATIC analysis ,PEDIATRICS ,RESEARCH methodology ,CLUBFOOT ,PSYCHOLOGY of caregivers ,CLEFT lip ,COMPARATIVE studies ,CAREGIVER attitudes ,PEOPLE with disabilities ,SOCIAL stigma ,CLEFT palate - Abstract
In Tanzania, about 600 000 youth between 5 and 24 years old have a disability. Individuals with disabilities face numerous obstacles due to social stigma. The aim of this formative evaluation is to assess how caregivers of children with correctable disabilities (e.g., cleft lip/palate, club foot, and burn scar contractures) in Tanzania perceive their community's acceptance of their child before and after surgical treatment. Semi‐structured interviews were conducted with 80 caregivers of children with disabilities treated at Kafika House in Arusha, Tanzania. The constant comparative method identified themes regarding the caregivers' feelings on their child's functional abilities and experiences of stigma in their community. Caregiver perceptions of stigma before and after surgical treatment were categorized and quantified as 'positive', 'neutral' and 'negative'. Thematic analysis of the 80 interviews resulted in five major themes: (1) stigma and acceptance (pre‐treatment) and (2) post‐treatment; (3) functional abilities (pre‐treatment) and (4) post‐treatment; and (5) emotional impact (pre‐ and post‐treatment). These themes indicate caregivers and their children experience a range of emotional impacts before and after treatment, more severe stigma before treatment, and overall better social, emotional and functional status after treatment. Frequency analysis of caregiver experiences indicated that stigma experienced by children and their families decreased from 75% before surgical treatment to 2.5% after surgery. Surgical intervention and rehabilitation of physical disabilities mitigated experiences of social stigma for both children and their caregivers. Findings support the need for expanded treatment of correctable disabilities, larger investments in community‐based rehabilitation programmes and further interventions to support stigmatized parents and their children. [ABSTRACT FROM AUTHOR]
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- 2024
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18. A High-Calorie Diet Aggravates Mitochondrial Dysfunction and Triggers Severe Liver Damage in Wilson Disease RatsSummary
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Claudia Einer, Christin Leitzinger, Josef Lichtmannegger, Carola Eberhagen, Tamara Rieder, Sabine Borchard, Ralf Wimmer, Gerald Denk, Bastian Popper, Frauke Neff, Elena V. Polishchuk, Roman S. Polishchuk, Stefanie M. Hauck, Christine von Toerne, Jennifer-Christin Müller, Uwe Karst, Bipin S. Baral, Alan A. DiSpirito, Andreas E. Kremer, Jeremy Semrau, Karl Heinz Weiss, Simon Hohenester, and Hans Zischka
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Diseases of the digestive system. Gastroenterology ,RC799-869 - Abstract
Background & Aims: In Wilson disease, ATP7B mutations impair copper excretion into bile. Hepatic copper accumulation may induce mild to moderate chronic liver damage or even acute liver failure. Etiologic factors for this heterogeneous phenotype remain enigmatic. Liver steatosis is a frequent finding in Wilson disease patients, suggesting that impaired copper homeostasis is linked with liver steatosis. Hepatic mitochondrial function is affected negatively both by copper overload and steatosis. Therefore, we addressed the question of whether a steatosis-promoting high-calorie diet aggravates liver damage in Wilson disease via amplified mitochondrial damage. Methods: Control Atp7b+/- and Wilson disease Atp7b-/- rats were fed either a high-calorie diet (HCD) or a normal diet. Copper chelation using the high-affinity peptide methanobactin was used in HCD-fed Atp7b-/- rats to test for therapeutic reversal of mitochondrial copper damage. Results: In comparison with a normal diet, HCD feeding of Atp7b-/- rats resulted in a markedly earlier onset of clinically apparent hepatic injury. Strongly increased mitochondrial copper accumulation was observed in HCD-fed Atp7b-/- rats, correlating with severe liver injury. Mitochondria presented with massive structural damage, increased H2O2 emergence, and dysfunctional adenosine triphosphate production. Hepatocellular injury presumably was augmented as a result of oxidative stress. Reduction of mitochondrial copper by methanobactin significantly reduced mitochondrial impairment and ameliorated liver damage. Conclusions: A high-calorie diet severely aggravates hepatic mitochondrial and hepatocellular damage in Wilson disease rats, causing an earlier onset of the disease and enhanced disease progression. Keywords: Copper-Storage Disease, Steatosis, Steatohepatitis, Mitochondria, Methanobactin
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- 2019
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19. The role of the NADH-dependent nitrite reductase, Nir, from Escherichia coli in fermentative ammonification
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Wang, Xiaoguang, Tamiev, Denis, Alagurajan, Jagannathan, DiSpirito, Alan A., Phillips, Gregory J., and Hargrove, Mark S.
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- 2019
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20. Methanobactin, a Copper-Acquisition Compound from Methane-Oxidizing Bacteria
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Kim, Hyung J., Graham, David W., DiSpirito, Alan A., Alterman, Michail A., Galeva, Nadezhda, Larive, Cynthia K., and Asunskis, Dan
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- 2004
21. Methanobactin from Methylosinus trichosporium OB3b inhibits N2O reduction in denitrifiers
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Chang, Jin, Gu, Wenyu, Park, Doyoung, Semrau, Jeremy D., DiSpirito, Alan A., and Yoon, Sukhwan
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- 2018
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22. Inhibition of nitrous oxide reduction in forest soil microcosms by different forms of methanobactin.
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Chang, Jin, Peng, Peng, Farhan Ul‐Haque, Muhammad, Hira, Abid, DiSpirito, Alan A., and Semrau, Jeremy D.
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FOREST soils ,NITROUS oxide ,COPPER in soils ,GREENHOUSE gases ,NITRITE reductase ,IRON ,COPPER - Abstract
Copper plays a critical role in controlling greenhouse gas emissions as it is a key component of the particulate methane monooxygenase and nitrous oxide reductase. Some methanotrophs excrete methanobactin (MB) that has an extremely high copper affinity. As a result, MB may limit the ability of other microbes to gather copper, thereby decreasing their activity as well as impacting microbial community composition. Here, we show using forest soil microcosms that multiple forms of MB; MB from Methylosinus trichosporium OB3b (MB‐OB3b) and MB from Methylocystis sp. strain SB2 (MB‐SB2) increased nitrous oxide (N2O) production as well caused significant shifts in microbial community composition. Such effects, however, were mediated by the amount of copper in the soils, with low‐copper soil microcosms showing the strongest response to MB. Furthermore, MB‐SB2 had a stronger effect, likely due to its higher affinity for copper. The presence of either form of MB also inhibited nitrite reduction and generally increased the presence of genes encoding for the iron‐containing nitrite reductase (nirS) over the copper‐dependent nitrite reductase (nirK). These data indicate the methanotrophic‐mediated production of MB can significantly impact multiple steps of denitrification, as well as have broad effects on microbial community composition of forest soils. [ABSTRACT FROM AUTHOR]
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- 2023
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23. Targeting PPAR[gamma] in the epigenome rescues genetic metabolic defects in mice
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Soccio, Raymond E., Li, Zhenghui, Chen, Eric R., Foong, Yee Hoon, Benson, Kiara K., Dispirito, Joanna R., Mullican, Shannon E., Emmett, Matthew J., Briggs, Erika R., Peed, Lindsey C., Dzeng, Richard K., Medina, Carlos J., Jolivert, Jennifer F., Kissig, Megan, Rajapurkar, Satyajit R., Damle, Manashree, Lim, Hee-Woong, Won, Kyoung-Jae, Seale, Patrick, Steger, David J., and Lazar, Mitchell A.
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Epigenetic inheritance -- Health aspects ,Metabolic diseases -- Genetic aspects -- Drug therapy ,Rosiglitazone maleate -- Usage ,Health care industry - Abstract
Obesity causes insulin resistance, and PPAR[gamma] ligands such as rosiglitazone are insulin sensitizing, yet the mechanisms remain unclear. In C57BL/6 (B6) mice, obesity induced by a high-fat diet (HFD) has major effects on visceral epididymal adipose tissue (eWAT). Here, we report that HFD-induced obesity in B6 mice also altered the activity of gene regulatory elements and genome-wide occupancy of PPAR[gamma]. Rosiglitazone treatment restored insulin sensitivity in obese B6 mice, yet, surprisingly, had little effect on gene expression in eWAT. However, in subcutaneous inguinal fat (iWAT), rosiglitazone markedly induced molecular signatures of brown fat, including the key thermogenic gene Ucp1. Obesity-resistant 129S1/SvImJ mice (129 mice) displayed iWAT browning, even in the absence of rosiglitazone. The 129 Ucp1 locus had increased PPAR[gamma] binding and gene expression that were preserved in the iWAT of B6x129 F1-intercrossed mice, with an imbalance favoring the 129-derived alleles, demonstrating a c/s-acting genetic difference. Thus, B6 mice have genetically defective Ucp1 expression in iWAT. However, when Ucp1 was activated by rosiglitazone, or by iWAT browning in cold-exposed or young mice, expression of the B6 version of Ucp1 was no longer defective relative to the 129 version, indicating epigenomic rescue. These results provide a framework for understanding how environmental influences like drugs can affect the epigenome and potentially rescue genetically determined disease phenotypes., Introduction There is a worldwide epidemic of obesity and diabetes, yet the mechanisms whereby obesity leads to insulin resistance are incompletely understood (1). While diabetes is a multisystem disease also [...]
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- 2017
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24. Carbon source regulation of gene expression in Methylosinus trichosporium OB3b
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Farhan Ul Haque, Muhammad, Gu, Wenyu, Baral, Bipin S., DiSpirito, Alan A., and Semrau, Jeremy D.
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- 2017
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25. Mercury binding by methanobactin from Methylocystis strain SB2
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Baral, Bipin S., Bandow, Nathan L., Vorobev, Alexy, Freemeier, Brittani C., Bergman, Brandt H., Herdendorf, Timothy J., Fuentes, Nathalie, Ellias, Luke, Turpin, Erick, Semrau, Jeremy D., and DiSpirito, Alan A.
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- 2014
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26. Methanobactin reverses acute liver failure in a rat model of Wilson disease
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Lichtmannegger, Josef, Leitzinger, Christin, Wimmer, Ralf, Schmit, Sabine, Schulz, Sabine, Kabiri, Yaschar, Eberhagen, Carola, Rieder, Tamara, Janik, Dirk, Neff, Frauke, Straub, Beate K., Schirmacher, Peter, DiSpirito, Alan A., Bandow, Nathan, Baral, Bipin S., Flatley, Andrew, Kremmer, Elisabeth, Denk, Gerald, Reiter, Florian P., Hohenester, Simon, Eckardt-Schupp, Friedericke, Dencher, Norbert A., Adamski, Jerzy, Sauer, Vanessa, Niemietz, Christoph, Schmidt, Hartmut H.J., Uta, Merle, Gotthardt, Daniel Nils, Kroemer, Guido, Weiss, Karl Heinz, and Zischka, Hans
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Wilson's disease -- Models ,Liver failure -- Care and treatment ,Peptides -- Usage -- Health aspects ,Health care industry - Abstract
In Wilson disease (WD), functional loss of ATPase copper-transporting p (ATP7B) impairs biliary copper excretion, leading to excessive copper accumulation in the liver and fulminant hepatitis. Current US Food and Drug Administration- and European Medicines Agency-approved pharmacological treatments usually fail to restore copper homeostasis in patients with WD who have progressed to acute liver failure, leaving liver transplantation as the only viable treatment option. Here, we investigated the therapeutic utility of methanobactin (MB), a peptide produced by Methylosinus trichosporium OB3b, which has an exceptionally high affinity for copper. We demonstrated that ATP7B-deficient rats recapitulate WD-associated phenotypes, including hepatic copper accumulation, liver damage, and mitochondrial impairment. Short-term treatment of these rats with MB efficiently reversed mitochondrial impairment and liver damage in the acute stages of liver copper accumulation compared with that seen in untreated ATP7B-deficient rats. This beneficial effect was associated with depletion of copper from hepatocyte mitochondria. Moreover, MB treatment prevented hepatocyte death, subsequent liver failure, and death in the rodent model. These results suggest that MB has potential as a therapeutic agent for the treatment of acute WD., Introduction Wilson disease (WD) is an autosomal recessively inherited disorder of copper metabolism caused by ATPase copper-transporting β (ATP7B) gene mutations (1-3). ATP7B is a copper-transporting ATPase that mediates copper [...]
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- 2016
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27. Uptake and effect of rare earth elements on gene expression in Methylosinus trichosporium OB3b
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Gu, Wenyu, Farhan Ul Haque, Muhammad, DiSpirito, Alan A., and Semrau, Jeremy D.
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- 2016
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28. Lipoatrophy and severe metabolic disturbance in mice with fat-specific deletion of PPARγ
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Wang, Fenfen, Mullican, Shannon E., DiSpirito, Joanna R., Peed, Lindsey C., and Lazar, Mitchell A.
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- 2013
29. Crystal structure of MbnF: an NADPH‐dependent flavin monooxygenase from Methylocystis strain SB2.
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Stewart, Andrew, Dershwitz, Philip, Stewart, Charles, Sawaya, Michael R., Yeates, Todd O., Semrau, Jeremy D., Zischka, Hans, DiSpirito, Alan A., and Bobik, Thomas A.
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NICOTINAMIDE adenine dinucleotide phosphate ,CRYSTAL structure ,MONOOXYGENASES ,PEPTIDES ,GENE clusters ,POST-translational modification ,NAD (Coenzyme) - Abstract
Methanobactins (MBs) are ribosomally produced and post‐translationally modified peptides (RiPPs) that are used by methanotrophs for copper acquisition. The signature post‐translational modification of MBs is the formation of two heterocyclic groups, either an oxazolone, pyrazinedione or imidazolone group, with an associated thioamide from an X‐Cys dipeptide. The precursor peptide (MbnA) for MB formation is found in a gene cluster of MB‐associated genes. The exact biosynthetic pathway of MB formation is not yet fully understood, and there are still uncharacterized proteins in some MB gene clusters, particularly those that produce pyrazinedione or imidazolone rings. One such protein is MbnF, which is proposed to be a flavin monooxygenase (FMO) based on homology. To help to elucidate its possible function, MbnF from Methylocystis sp. strain SB2 was recombinantly produced in Escherichia coli and its X‐ray crystal structure was resolved to 2.6 Å resolution. Based on its structural features, MbnF appears to be a type A FMO, most of which catalyze hydroxylation reactions. Preliminary functional characterization shows that MbnF preferentially oxidizes NADPH over NADH, supporting NAD(P)H‐mediated flavin reduction, which is the initial step in the reaction cycle of several type A FMO enzymes. It is also shown that MbnF binds the precursor peptide for MB, with subsequent loss of the leader peptide sequence as well as the last three C‐terminal amino acids, suggesting that MbnF might be needed for this process to occur. Finally, molecular‐dynamics simulations revealed a channel in MbnF that is capable of accommodating the core MbnA fragment minus the three C‐terminal amino acids. [ABSTRACT FROM AUTHOR]
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- 2023
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30. Spectral and copper binding properties of methanobactin from the facultative methanotroph Methylocystis strain SB2
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Bandow, Nathan, Gilles, Valerie S., Freesmeier, Brittani, Semrau, Jeremy D., Krentz, Benjamin, Gallagher, Warren, McEllistrem, Marcus T., Hartsel, Scott C., Choi, Dong W., Hargrove, Mark S., Heard, Teresa M., Chesner, Lisa N., Braunreiter, Kara M., Cao, Bach V., Gavitt, Megan M., Hoopes, John Z., Johnson, James M., Polster, Emily M., Schoenick, Brittany D., Umlauf, Ashley M., and DiSpirito, Alan A.
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- 2012
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31. Oxygen generation via water splitting by a novel biogenic metal ion binding compound
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Nathan L. Bandow, Jeremy D. Semrau, Matheus Fonseca, Junwon Yang, Mark S. Hargrove, Alan A. DiSpirito, Hans Zischka, Thomas A. Bobik, Marcus T. McEllistrem, Ana M DiSpirito, Rafael A Heinze, Jacob R Jennett, Navjot Singh Athwal, Philip Dershwitz, and Joshua C Ledesma
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Methanotroph ,Physiology ,Metal ions in aqueous solution ,chemistry.chemical_element ,Photochemistry ,Applied Microbiology and Biotechnology ,Oxygen ,Methane ,Metal ,03 medical and health sciences ,chemistry.chemical_compound ,Metals, Heavy ,methanotroph ,methanobactin ,030304 developmental biology ,0303 health sciences ,Ecology ,030306 microbiology ,chalkophore ,Imidazoles ,Water ,Methanobactin ,Chalkophore ,Water Oxidation ,Aerobic Methane Oxidation ,Gold Nanoparticle ,Copper ,ddc ,water oxidation ,chemistry ,visual_art ,Anaerobic oxidation of methane ,visual_art.visual_art_medium ,Methylocystaceae ,Oligopeptides ,Oxidation-Reduction ,gold nanoparticle ,aerobic methane oxidation ,Food Science ,Biotechnology - Abstract
Methanobactins (MBs) are small (
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- 2021
32. The biogenic methanobactin is an effective chelator for copper in a rat model for Wilson disease
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Summer, Karl H., Lichtmannegger, Josef, Bandow, Nathan, Choi, Don W., DiSpirito, Alan A., and Michalke, Bernhard
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- 2011
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33. Spectral and thermodynamic properties of methanobactin from γ-proteobacterial methane oxidizing bacteria: A case for copper competition on a molecular level
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Choi, Dong W., Bandow, Nathan L., McEllistrem, Marcus T., Semrau, Jeremy D., Antholine, William E., Hartsel, Scott C., Gallagher, Warren, Zea, Corbin J., Pohl, Nicole L., Zahn, James A., and DiSpirito, Alan A.
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- 2010
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34. Evidence for methanobactin 'Theft' and novel chalkophore production in methanotrophs: impact on methanotrophic-mediated methylmercury degradation
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Christina S Kang-Yun, Baohua Gu, Daly J Pelger, Lijie Zhang, Alan A. DiSpirito, Wenyu Gu, Xia Lu, Andrew Flatley, Xujun Liang, Jeremy D. Semrau, Aloys Schepers, Philip Dershwitz, Hans Zischka, Josef Lichtmannegger, and Joshua C Ledesma
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Methane emissions ,0303 health sciences ,biology ,030306 microbiology ,Multiple forms ,Methylmercury degradation ,Methanobactin ,Methylocystis sp ,biology.organism_classification ,Microbiology ,Article ,03 medical and health sciences ,chemistry.chemical_compound ,Biochemistry ,Biosynthesis ,chemistry ,Methylomicrobium album ,Ecology, Evolution, Behavior and Systematics ,Methylococcus capsulatus ,Copper ,030304 developmental biology ,Chelating Agents - Abstract
Aerobic methanotrophy is strongly controlled by copper, and methanotrophs are known to use different mechanisms for copper uptake. Some methanotrophs secrete a modified polypeptide-methanobactin-while others utilize a surface-bound protein (MopE) and a secreted form of it (MopE*) for copper collection. As different methanotrophs have different means of sequestering copper, competition for copper significantly impacts methanotrophic activity. Herein, we show that Methylomicrobium album BG8, Methylocystis sp. strain Rockwell, and Methylococcus capsulatus Bath, all lacking genes for methanobactin biosynthesis, are not limited for copper by multiple forms of methanobactin. Interestingly, Mm. album BG8 and Methylocystis sp. strain Rockwell were found to have genes similar to mbnT that encodes for a TonB-dependent transporter required for methanobactin uptake. Data indicate that these methanotrophs "steal" methanobactin and such "theft" enhances the ability of these strains to degrade methylmercury, a potent neurotoxin. Further, when mbnT was deleted in Mm. album BG8, methylmercury degradation in the presence of methanobactin was indistinguishable from when MB was not added. Mc. capsulatus Bath lacks anything similar to mbnT and was unable to degrade methylmercury either in the presence or absence of methanobactin. Rather, Mc. capsulatus Bath appears to rely on MopE/MopE* for copper collection. Finally, not only does Mm. album BG8 steal methanobactin, it synthesizes a novel chalkophore, suggesting that some methanotrophs utilize both competition and cheating strategies for copper collection. Through a better understanding of these strategies, methanotrophic communities may be more effectively manipulated to reduce methane emissions and also enhance mercury detoxification in situ.
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- 2021
35. Deep image prior for undersampling high-speed photoacoustic microscopy
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Laiming Jiang, Roarke Horstmeyer, Qifa Zhou, Tri Vu, Zixuan Wang, Dong Zhang, Yu Shrike Zhang, Xiaoyi Zhu, Maomao Chen, Daiwei Li, Jianwen Luo, Junjie Yao, and Anthony DiSpirito
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FOS: Computer and information sciences ,Image quality ,Computer science ,Computer Vision and Pattern Recognition (cs.CV) ,QC1-999 ,Computer Science - Computer Vision and Pattern Recognition ,Photoacoustic microscopy ,QC221-246 ,Convolutional neural network ,02 engineering and technology ,01 natural sciences ,010309 optics ,0103 physical sciences ,FOS: Electrical engineering, electronic engineering, information engineering ,Radiology, Nuclear Medicine and imaging ,Computer vision ,High-speed imaging ,Ground truth ,Pixel ,business.industry ,Deep learning ,Physics ,Image and Video Processing (eess.IV) ,Acoustics. Sound ,Undersampling ,QC350-467 ,Electrical Engineering and Systems Science - Image and Video Processing ,Optics. Light ,021001 nanoscience & nanotechnology ,Deep image prior ,Atomic and Molecular Physics, and Optics ,Artificial intelligence ,Raster scanning ,0210 nano-technology ,business ,Raster scan ,Research Article ,Interpolation - Abstract
Photoacoustic microscopy (PAM) is an emerging imaging method combining light and sound. However, limited by the laser's repetition rate, state-of-the-art high-speed PAM technology often sacrifices spatial sampling density (i.e., undersampling) for increased imaging speed over a large field-of-view. Deep learning (DL) methods have recently been used to improve sparsely sampled PAM images; however, these methods often require time-consuming pre-training and large training dataset with ground truth. Here, we propose the use of deep image prior (DIP) to improve the image quality of undersampled PAM images. Unlike other DL approaches, DIP requires neither pre-training nor fully-sampled ground truth, enabling its flexible and fast implementation on various imaging targets. Our results have demonstrated substantial improvement in PAM images with as few as 1.4$\%$ of the fully sampled pixels on high-speed PAM. Our approach outperforms interpolation, is competitive with pre-trained supervised DL method, and is readily translated to other high-speed, undersampling imaging modalities.
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- 2021
36. A High-Calorie Diet Aggravates Mitochondrial Dysfunction and Triggers Severe Liver Damage in Wilson Disease RatsSummary
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Jeremy D. Semrau, Roman S. Polishchuk, Andreas E. Kremer, Bipin S. Baral, Claudia Einer, Christine von Toerne, Gerald Denk, Hans Zischka, Sabine Borchard, Tamara Rieder, Josef Lichtmannegger, Karl Heinz Weiss, Stefanie M. Hauck, Alan A. DiSpirito, Jennifer-Christin Müller, Uwe Karst, Elena V. Polishchuk, Carola Eberhagen, Ralf Wimmer, Christin Leitzinger, Frauke Neff, Simon Hohenester, and Bastian Popper
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Male ,0301 basic medicine ,NADH, reduced nicotinamide adenine dinucleotide ,Steatosis ,Proteome ,WD, Wilson disease ,AST, aspartate aminotransferase ,Mitochondrion ,medicine.disease_cause ,Cp, ceruloplasmin ,F1FO, adenosine triphosphate synthase ,0302 clinical medicine ,Hepatolenticular Degeneration ,Medicine ,Methanobactin ,Original Research ,Steatohepatitis ,Liver injury ,ND, normal diet ,Gastroenterology ,ICP, Inductively Coupled Plasma ,Copper Chelation ,Lipids ,ddc ,Mitochondria ,Editorial ,Liver ,MB, methanobactin ,Disease Progression ,Female ,030211 gastroenterology & hepatology ,HCD, high-calorie diet ,medicine.medical_specialty ,ATP, adenosine triphosphate ,Normal diet ,Acetyl-CoA, acetyl coenzyme A ,HAI, Histologic Activity Index ,Copper-storage Disease ,Bile Acids and Salts ,Excretion ,03 medical and health sciences ,ROS, reactive oxygen species ,Copper-Storage Disease ,Internal medicine ,Animals ,TRIS, tris-(hydroxymethyl)aminomethane ,lcsh:RC799-869 ,Inflammation ,Hepatology ,business.industry ,CS, citrate synthase ,medicine.disease ,ADP, adenosine diphosphate ,Diet ,Rats ,Fatty Liver ,030104 developmental biology ,Endocrinology ,MS, mass spectrometry ,Copper-Transporting ATPases ,Hepatocytes ,BSA, bovine serum albumin ,lcsh:Diseases of the digestive system. Gastroenterology ,EGTA, ethylene glycol-bis(β-aminoethyl ether)-N,N,N′,N′-tetraacetic acid ,NAFLD, nonalcoholic fatty liver disease ,Peptides ,business ,Copper ,Oxidative stress ,NAS, nonalcoholic fatty liver disease activity score - Abstract
Background & Aims In Wilson disease, ATP7B mutations impair copper excretion into bile. Hepatic copper accumulation may induce mild to moderate chronic liver damage or even acute liver failure. Etiologic factors for this heterogeneous phenotype remain enigmatic. Liver steatosis is a frequent finding in Wilson disease patients, suggesting that impaired copper homeostasis is linked with liver steatosis. Hepatic mitochondrial function is affected negatively both by copper overload and steatosis. Therefore, we addressed the question of whether a steatosis-promoting high-calorie diet aggravates liver damage in Wilson disease via amplified mitochondrial damage. Methods Control Atp7b+/- and Wilson disease Atp7b-/- rats were fed either a high-calorie diet (HCD) or a normal diet. Copper chelation using the high-affinity peptide methanobactin was used in HCD-fed Atp7b-/- rats to test for therapeutic reversal of mitochondrial copper damage. Results In comparison with a normal diet, HCD feeding of Atp7b-/- rats resulted in a markedly earlier onset of clinically apparent hepatic injury. Strongly increased mitochondrial copper accumulation was observed in HCD-fed Atp7b-/- rats, correlating with severe liver injury. Mitochondria presented with massive structural damage, increased H2O2 emergence, and dysfunctional adenosine triphosphate production. Hepatocellular injury presumably was augmented as a result of oxidative stress. Reduction of mitochondrial copper by methanobactin significantly reduced mitochondrial impairment and ameliorated liver damage. Conclusions A high-calorie diet severely aggravates hepatic mitochondrial and hepatocellular damage in Wilson disease rats, causing an earlier onset of the disease and enhanced disease progression., Graphical abstract
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- 2019
37. Sounding out the hidden data : a concise review of deep learning in photoacoustic imaging
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Tri Vu, Junjie Yao, Manojit Pramanik, Anthony DiSpirito, and School of Chemical and Biomedical Engineering
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Bioengineering [Engineering] ,Computer science ,Machine learning ,computer.software_genre ,01 natural sciences ,Convolutional neural network ,General Biochemistry, Genetics and Molecular Biology ,Field (computer science) ,030218 nuclear medicine & medical imaging ,Photoacoustic Techniques ,010309 optics ,03 medical and health sciences ,0302 clinical medicine ,Deep Learning ,Artificial Intelligence ,Neoplasms ,0103 physical sciences ,Image Processing, Computer-Assisted ,Animals ,Humans ,Artifact (error) ,Signal processing ,business.industry ,Deep learning ,Brain ,Signal Processing, Computer-Assisted ,Photoacoustic Tomography ,Visualization ,Undersampling ,Minireview ,Artificial intelligence ,Gradient descent ,business ,computer - Abstract
The rapidly evolving field of photoacoustic tomography utilizes endogenous chromophores to extract both functional and structural information from deep within tissues. It is this power to perform precise quantitative measurements in vivo-with endogenous or exogenous contrast-that makes photoacoustic tomography highly promising for clinical translation in functional brain imaging, early cancer detection, real-time surgical guidance, and the visualization of dynamic drug responses. Considering photoacoustic tomography has benefited from numerous engineering innovations, it is of no surprise that many of photoacoustic tomography's current cutting-edge developments incorporate advances from the equally novel field of artificial intelligence. More specifically, alongside the growth and prevalence of graphical processing unit capabilities within recent years has emerged an offshoot of artificial intelligence known as deep learning. Rooted in the solid foundation of signal processing, deep learning typically utilizes a method of optimization known as gradient descent to minimize a loss function and update model parameters. There are already a number of innovative efforts in photoacoustic tomography utilizing deep learning techniques for a variety of purposes, including resolution enhancement, reconstruction artifact removal, undersampling correction, and improved quantification. Most of these efforts have proven to be highly promising in addressing long-standing technical obstacles where traditional solutions either completely fail or make only incremental progress. This concise review focuses on the history of applied artificial intelligence in photoacoustic tomography, presents recent advances at this multifaceted intersection of fields, and outlines the most exciting advances that will likely propagate into promising future innovations. Accepted version This work was supported by the National Institutes of Health (R01 EB028143, R01 NS111039, RF1 NS115581, R21 EB027304, R21EB027981, R43 CA243822, R43 CA239830, R44 HL138185); Duke Institute of Brain Science Incubator Award; American Heart Association Collaborative Sciences Award (18CSA34080277); Chan Zuckerberg Initiative Grant on Deep Tissue Imaging 2020–226178 by Silicon Valley Community Foundation.
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- 2021
38. Liver mitochondrial membrane crosslinking and destruction in a rat model of Wilson disease
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Zischka, Hans, Lichtmannegger, Josef, Schmitt, Sabine, Jagemann, Nora, Schulz, Sabine, Wartini, Daniela, Jennen, Luise, Rust, Christian, Larochette, Nathanael, Galluzzi, Lorenzo, Chajes, Veronique, Bandow, Nathan, Gilles, Valerie S., DiSpirito, Alan A., Esposito, Irene, Goettlicher, Martin, Summer, Karl H., and Kroemer, Guido
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Wilson's disease -- Genetic aspects -- Development and progression ,Adenosine triphosphatase -- Health aspects ,Mitochondrial DNA -- Health aspects ,Health care industry - Abstract
Wilson disease (WD) is a rare hereditary condition that is caused by a genetic defect in the copper-transporting ATPase ATP7B that results in hepatic copper accumulation and lethal liver failure. The present study focuses on the structural mitochondrial alterations that precede clinical symptoms in the livers of rats lacking Atp7b, an animal model for WD. Liver mitochondria from these [Atp7b.sup.-/-] rats contained enlarged cristae and widened intermembrane spaces, which coincided with a massive mitochondrial accumulation of copper. These changes, however, preceded detectable deficits in oxidative phosphorylation and biochemical signs of oxidative damage, suggesting that the ultrastructural modifications were not the result of oxidative stress imposed by copper- dependent Fenton chemistry. In a cell-free system containing a reducing dithiol agent, isolated mitochondria exposed to copper underwent modifications that were closely related to those observed in vivo. In this cell-free system, copper induced thiol modifications of three abundant mitochondrial membrane proteins, and this correlated with reversible intramitochondrial membrane crosslinking, which was also observed in liver mitochondria from [Atp7b.sup.-/-] rats. In vivo, copper-chelating agents reversed mitochondrial accumulation of copper, as well as signs of intra-mitochondrial membrane crosslinking, thereby preserving the functional and structural integrity of mitochondria. Together, these findings suggest that the mitochondrion constitutes a pivotal target of copper in WD., Introduction Wilson disease (WD) is an autosomal recessive inherited fatal disorder (1). Loss-of-function mutations in the ATP7B gene, coding for a copper-transporting ATPase, lead to massive copper accumulation, primarily in [...]
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- 2011
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39. Oxidase, superoxide dismutase, and hydrogen peroxide reductase activities of methanobactin from types I and II methanotrophs
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Choi, Dong W., Semrau, Jeremy D., Antholine, William E., Hartsel, Scott C., Anderson, Ryan C., Carey, Jeffrey N., Dreis, Ashley M., Kenseth, Erik M., Renstrom, Joel M., Scardino, Lori L., Van Gorden, Garrett S., Volkert, Anna A., Wingad, Aaron D., Yanzer, Paul J., McEllistrem, Marcus T., de la Mora, Arlene M., and DiSpirito, Alan A.
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- 2008
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40. Life in the extreme: thermoacidophilic methanotrophy
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Semrau, Jeremy D., DiSpirito, Alan A., and Murrell, J. Colin
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- 2008
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41. Obesity-Linked PPARγ S273 Phosphorylation Promotes Insulin Resistance through Growth Differentiation Factor 3
- Author
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Hall, Jessica A., Ramachandran, Deepti, Roh, Hyun C., DiSpirito, Joanna R., Belchior, Thiago, Zushin, Peter-James H., Palmer, Colin, Hong, Shangyu, Mina, Amir I., Liu, Bingyang, Deng, Zhaoming, Aryal, Pratik, Jacobs, Christopher, Tenen, Danielle, Brown, Chester W., Charles, Julia F., Shulman, Gerald I., Kahn, Barbara B., Tsai, Linus T.Y., Rosen, Evan D., Spiegelman, Bruce M., and Banks, Alexander S.
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- 2020
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42. Effect of nutrient and selective inhibitor amendments on methane oxidation, nitrous oxide production, and key gene presence and expression in landfill cover soils: characterization of the role of methanotrophs, nitrifiers, and denitrifiers
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Lee, Sung-Woo, Im, Jeongdae, DiSpirito, Alan A., Bodrossy, Levente, Barcelona, Michael J., and Semrau, Jeremy D.
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- 2009
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43. Diffusion of H2S from anaerobic thiolated ligand biodegradation rapidly generates bioavailable mercury.
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Stenzler, Benjamin R., Zhang, Rui, Semrau, Jeremy D., DiSpirito, Alan A., and Poulain, Alexandre J.
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MERCURY ,BIODEGRADATION ,MICROBIAL metabolism ,MICROBIAL communities ,GENETIC speciation ,BIOAVAILABILITY - Abstract
Summary: Methylmercury is a potent neurotoxin that biomagnifies through food webs and which production depends on anaerobic microbial uptake of inorganic mercury (Hg) species. One outstanding knowledge gap in understanding Hg methylation is the nature of bioavailable Hg species. It has become increasingly obvious that Hg bioavailability is spatially diverse and temporally dynamic but current models are mostly built on single thiolated ligand systems, omitting ligand exchanges and interactions, or the inclusion of dissolved gaseous phases. In this study, we used a whole‐cell anaerobic biosensor to determine the role of a mixture of thiolated ligands on Hg bioavailability. Serendipitously, we discovered how the diffusion of trace amounts of exogenous biogenic H2S, originating from anaerobic microbial ligand degradation, can alter Hg speciation – away from H2S production site – to form bioavailable species. Regardless of its origins, H2S stands as a mobile mediator of microbial Hg metabolism, connecting spatially separated microbial communities. At a larger scale, global planetary changes are expected to accelerate the production and mobilization of H2S and Hg, possibly leading to increased production of the potent neurotoxin; this work provides mechanistic insights into the importance of co‐managing biogeochemical cycle disruptions. [ABSTRACT FROM AUTHOR]
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- 2022
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44. Developing an Assessment Tool for Post-Surgical Paediatric Rehabilitative Care in Tanzania: an Interprofessional Approach.
- Author
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Crusan, Ambria, Biggs, Jennifer, Maisano, Kristen, Palmborg, Michelle, Kinsman, Georgianne, DiSpirito, Keira, and Hartwig, Kari
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HUMAN services programs ,TREATMENT effectiveness ,INTERPROFESSIONAL relations ,REHABILITATION of children with disabilities ,INTERPERSONAL relations ,PATIENT care ,MEDICAL practice - Abstract
Purpose: Located in Arusha, Tanzania, The Plaster House provides rehabilitative services to children receiving surgical care for treatable disabilities. This article describes a set of outcome measurements developed in a collaborative relationship between an evaluation team from The Plaster House staff and St. Catherine University faculty, focused on effectively and efficiently collecting post-operative evaluation and outcome data from a rehabilitative care facility for children with treatable disabilities. Method: From seven care pathways utilised for surgically treatable disabilities (cleft lip and palate, spina bifida, skeletal fluorosis, osteomyelitis, burns, clubfoot and hydrocephalus), an interactive process led to the development of a medical assessment tool for monitoring and evaluation with limited electronic health record and staffing capacity. Results: The medical assessment tool serves multiple purposes for the rehabilitation programme, including monitoring participants' progress, evaluating the effectiveness of current practices, and sharing data with stakeholders. The tool includes collection of demographic and background information, one to three diagnosis-specific indicators to measure progress, and three questions related to typical development (activities of daily living, play, and social interaction). Conclusion and Implications: Due to the delayed ability to conduct a site visit, the evaluation team relied heavily on effective communication to sufficiently relay challenges and successes in developing and implementing the tool. The proposed medical assessment tool developed by an interprofessional team has the potential to feasibly capture post-operative outcome measurements during rehabilitative care. [ABSTRACT FROM AUTHOR]
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- 2022
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45. Obesity-linked PPARγ S273 phosphorylation promotes insulin resistance through Growth Differentiation Factor 3
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Daniel G. Tenen, Joanna R. DiSpirito, Christopher Jacobs, Zhaoming Deng, Pratik Aryal, Barbara B. Kahn, Deepti Ramachandran, Chester W. Brown, Amir Mina, Peter-James H. Zushin, Bruce M. Spiegelman, Jessica A. Hall, Hyun Cheol Roh, Julia F. Charles, T. Belchior de Oliveira, Linus T.-Y. Tsai, Bingyang Liu, Gerald I. Shulman, Evan D. Rosen, Shangyu Hong, Colin J Palmer, and Alexander S. Banks
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Male ,0301 basic medicine ,medicine.medical_specialty ,Physiology ,Glucose uptake ,Peroxisome proliferator-activated receptor ,Adipose tissue ,Article ,Serine ,Mice ,03 medical and health sciences ,0302 clinical medicine ,Insulin resistance ,Internal medicine ,Growth Differentiation Factor 3 ,medicine ,Animals ,Humans ,Obesity ,Phosphorylation ,Receptor ,Molecular Biology ,Alleles ,Cells, Cultured ,030304 developmental biology ,chemistry.chemical_classification ,0303 health sciences ,biology ,Chemistry ,Cell Biology ,medicine.disease ,3. Good health ,Mice, Inbred C57BL ,PPAR gamma ,Insulin receptor ,030104 developmental biology ,Endocrinology ,Adipogenesis ,biology.protein ,Thiazolidinediones ,Ectopic expression ,Insulin Resistance ,030217 neurology & neurosurgery - Abstract
Overnutrition and obesity promote adipose tissue dysfunction, often leading to systemic insulin resistance. The thiazolidinediones (TZDs) are a potent class of insulin-sensitizing drugs and ligands of PPARγ that improve insulin sensitivity, but their use is limited due to significant side effects. Recently, we demonstrated a mechanism by which TZDs improve insulin sensitivity distinct from receptor agonism and adipogenesis: reversal of obesity-linked phosphorylation of PPARγ at Serine 273. However, the role of this modification has not been tested genetically. Here we demonstrate that mice encoding an allele of PPARγ which cannot be phosphorylated at S273 are protected from insulin resistance, without exhibiting differences in body weight or TZD-associated side effects. Indeed, hyperinsulinemic-euglycemic clamp experiments confirm improved insulin sensitivity, as evidenced by increased whole-body glucose uptake. RNA-seq experiments reveal PPARγ S273 phosphorylation specifically enhances transcription of Gdf3, a BMP family member. Ectopic expression of Gdf3 is sufficient to induce insulin resistance in lean, healthy mice. We find that Gdf3 can impact metabolism by inhibition of BMP signaling. Together, these results highlight the diabetogenic role of PPARγ S273 phosphorylation and focuses attention on a putative target, Gdf3.
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- 2020
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46. THU-259 - ARBM-101 as an emerging potent therapeutic option for Wilson disease
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Akdogan, Banu, Kim, Eun-Jung, Munk, Emilie, Kim, Dasol, Nagel, Judith, Park, Eok, Min, Byong-Keol, Lee, Hongjae, Park, Dongsik, Jung, Chunwon, Im, Weonbin, Eun, So-Young, Semrau, Jeremy, DiSpirito, Alan, Hohenester, Simon, Sandahl, Thomas Damgaard, and Zischka, Hans
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- 2023
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47. Spectral, kinetic, and thermodynamic properties of Cu(I) and Cu(II) binding by methanobactin from Methylosinus trichosporium OB3b
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Dong W. Choi, Hargrove, Mark S., Shafe, Peter H., de la Mora, Arlene M., Zea, Corbin J., Pohl, Nicola L., McEllistrem, Marcus T., DiSpirito, Alan A., Do, Young S., Boyd, Eric S., Kisting, Clint J., Semrau, Jeremy D., Geesey, G.G., Campbell, Damon, Antholine, William E., Hartsel, Scott C., and Rao, Vinay
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Copper compounds -- Chemical properties ,Circular dichroism -- Research ,Thermodynamics -- Research ,Microbiological chemistry -- Research ,Biological sciences ,Chemistry - Abstract
The metal binding properties of methanobactin (mb) are studied using spectral (UV-visible, fluorescence and circular dichroism), kinetic and thermodynamic data, to examine its potential role as the extracellular component of a copper acquisition system in methylosinus trichosporium OB3b. Data suggest copper coordination changes at different Cu(II):mb ratios, and that mb appears to initially bind Cu(I) as a monomer and Cu(II) as a homodimer.
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- 2006
48. Evaluation of succinic acid continuous and repeat-batch biofilm fermentation by Actinobacillus succinogenes using plastic composite support bioreactors
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Urbance, Susan E., Pometto, III, Anthony L., DiSpirito, Alan A., and Denli, Yuksel
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- 2004
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49. Effect of methanobactin on the activity and electron paramagnetic resonance spectra of the membrane-associated methane monooxygenase in Methylococcus capsulatus Bath
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Choi, Dong W., Antholine, William E., Do, Young S., Semrau, Jeremy D., Kisting, Clint J., Kunz, Ryan C., Campbell, Damon, Rao, Vinay, Hartsel, Scott C., and DiSpirito, Alan A.
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Methane -- Research ,Electron paramagnetic resonance spectroscopy -- Research ,Methanobacteriaceae -- Research ,Biological sciences - Abstract
Improvements in the purification of methanobactin (mb) from either Methylosinus trichosporium [OB3b.sup.[dagger]] or Methylococcus capsulatus Bath resulted in preparations that stimulated methane-oxidation activity in both whole-cell and cell-free fractions of Methylococcus capsulatus Bath expressing the membrane-associated methane monooxygenase (pMMO). By using washed membrane factions with pMMO activities in the 290 nmol propylene oxidized [min.sup.-1] [(mg protein).sup.-1] range, activities approaching 400 nmol propylene oxidized [min.sup.-1] [(mg protein).sup.-1] were commonly observed following addition of copper-containing mb (Cu-mb), which represented 50-75 % of the total whole-cell activity. The stimulation of methane-oxidation activity by Cu--mb was similar to or greater than that observed with equimolar concentrations of Cu(II), without the inhibitory effects observed with high copper concentrations. Stimulation of pMMO activity was not observed with copper-free mb, nor was it observed when the copper-to-mb ratio was
- Published
- 2005
50. Evidence for a copper-dependent iron transport system in the marine, magnetotactic bacterium strain MV-1
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Dubbels, Bradley L., DiSpirito, Alan A., Morton, John D., Semrau, Jeremy D., Neto, J.N.E., and Bazylinski, Dennis A.
- Subjects
Cells -- Research ,Biological sciences - Abstract
Cells of the magnetotactic marine vibrio, strain MV-1, produce magnetite-containing magnetosomes when grown anaerobically or microaerobically. Stable, spontaneous, non-magnetotactic mutants were regularly observed when cells of MV-1 were cultured on solid media incubated under anaerobic or microaerobic conditions. Randomly amplified polymorphic DNA analysis showed that these mutants are not all genetically identical. Cellular iron content of one non-magnetotactic mutant strain, designated MV-1nm1, grown anaerobically, was ~20- to 80-fold less than the iron content of wild-type (wt) MV-1 for the same iron concentrations, indicating that MV-1 nm1 is deficient in some form of iron uptake. Comparative protein profiles of the two strains showed that MV-1nm1 did not produce several proteins produced by wt MV-1. To understand the potential roles of these proteins in iron transport better, one of these proteins was purified and characterized. This protein, a homodimer with an apparent subunit mass of about 19 kDa, was an iron-regulated, periplasmic protein (p19). Two potential 'copper-handling' motifs (MXM/M[X.sub.2]M) are present in the amino acid sequence of p 19, and the native protein binds copper in a 1 : 1 ratio. The structural gene for p 19, chpA (copper handling protein) and two other putative genes upstream of chpA were cloned and sequenced. These putative genes encode a protein similar to the iron permease, Ftr1, from the yeast Saccharomyces cerevisiae, and a ferredoxin-like protein of unknown function. A periplasmic, copper-containing, iron(II) oxidase was also purified from wt MV-1 and MV-1nm1. This enzyme, like p19, was regulated by media iron concentration and contained four copper atoms per molecule of enzyme. It is hypothesized that ChpA, the iron permease and the iron(II) oxidase might have analogous functions for the three components of the S. cerevisiae copper-dependent high-affinity iron uptake system (Ctr1, Ftr1 and Fet3, respectively), and that strain MV-1 may have a similar iron uptake system. However, iron(II) oxidase purified from both wt MV-1 and MV-1nm1 displayed comparable iron oxidase activities using [O.sub.2] as the electron acceptor, indicating that ChpA does not supply the multi-copper iron(II) oxidase with copper.
- Published
- 2004
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