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Abstract Background Lizards of the genus Podarcis are widespread in the Mediterranean region, including islands and island archipelagos. These small-bodied lizards have a predominantly protective green-brown colouration. However, some populations display unusual patterns, in which the colouration is predominantly blue or uniformly black. This study explores the factors that influence this chromatic variation, whether environmental (climate and island conditions) or evolutionary (phylogenetic trait conservatism). The colouration of 1400 individuals (27 species) was analysed in the CIELAB colour space. Results Pagel’s λ indicated that colouration is weakly conserved within phylogenetic lineages. Although the island surface plays a key role in the chromatic variability of these lacertids, geographic isolation and climate hold less influence. The colouration of some small island populations tends to be uniform and dark, possibly due to intense intraspecific competition and lower predatory pressure. Conclusions This study highlights the importance of island populations in understanding the processes that favour the emergence of extreme phenotypes in small ectothermic vertebrates.

Madagascar is a biodiversity hotspot, containing a large proportion of endemic species. To make conservation efforts more effective, it is necessary to understand the spatial distribution of this huge biodiversity. In this study, the patterns of morphological variation and diversity in the adult anurans of Madagascar were evaluated and compared across different climatic regions. These patterns were investigated for 370 species (2360 specimens), and the variation in 13 morphological traits obtained from taxonomic databases was assessed. The results revealed differences in body size distribution across climatic regions and that the most morphologically distinctive species occur in humid regions. The analysis also showed that anuran assemblages tend to be more species-rich, more morphologically diverse, and more morphologically clustered in tropical rainforests. These patterns are attributable to regional variations in the amount and seasonality of precipitation. An understanding of the complex patterns of spatial diversity could be useful for regional prioritization in the conservation of Madagascan anurans.

Abstract The Mediterranean peninsulas host rich assemblages of lizards, but little is known about the factors that limit their habitat use on large spatial scales. In this study, we investigated the variation in habitat use of 29 species of lacertid lizards on the Iberian and Italian peninsulas and the transitional region of southeastern France. We investigated whether the types of habitat used were phylogenetically determined or, in contrast, were more influenced by spatial or climatic effects. We characterized the vegetal composition of 483 habitats used by lacertids and estimated the contribution of each component to habitat variability using distance‐based redundancy analysis. We showed that overall turnover patterns were determined similarly in both peninsulas, despite differences in the composition of the lacertid assemblages. The aridity‐related component dominated over the phylogenetic one, which has a weak influence in both regions. The species showed different turnover patterns, being low in those present in cold alpine habitats and shrub‐steppe specialists. In some Iberian endemics, habitat turnover occurs within relatively homogeneous climatic bands. However, in the Italian species, habitat turnover has a comparatively stronger climatic component, suggesting lower climatic specialization. This study shows that species distributions across habitats provide information to assess community properties and can be applied to explore differences among faunal assemblages over large geographic areas. Our results provide evidence that beta diversity can play a key role in structuring patterns of habitat turnover.

Abstract Mediterranean islands have a high diversity of squamates, although they are unevenly distributed. This variability in the composition of the reptile assemblages across islands may have been influenced by differences in the colonization abilities of these species. To evaluate the dispersal capacities of squamate species, we modeled their sea routes using cost surface models. We estimated the effects of some life‐history traits and the phylogenetic signal in the characteristics of the modeled dispersal paths. We hypothesized that a significant phylogenetic signal should be present if the dispersal ability is enhanced by traits shared among evolutionarily related species. The results showed that no phylogenetic signal was present in the characteristics of the dispersal paths (i.e., in the distance traveled/bypassed sea depth). Thus, no superior island‐colonizer lineages were detected in Mediterranean Squamata. However, our analyses also revealed that small‐sized lizards were superior to other groups of squamates at dispersing over long distances on the sea.

Background Tortoises of the genus Testudo are widely distributed throughout the Mediterranean region and southwestern Asia. However, the evolutionary mechanisms of diversification in this genus are still poorly understood. Methods In this study, we assessed the evolutionary patterns in the climate niches of five species and 11 subspecies of the genus Testudo using ecological niche models and evaluated the niche overlap based on species phylogenetic distances. Results The ecological models indicated that most species differ in their climate niches, but show overlap, with gradual transitions at range boundaries. As expected, the ecological divergence among subspecies was lower than that among species. Evaluation of the phylogenetic signal indicated that climate niches have been weakly conserved, but sister species also show high evolutionary divergence.

Abstract Mediterranean islands have complex reptile assemblages, but little is known about the factors that determine their organization. In this study, the structure of assemblages of Squamata was evaluated based on their species richness and two measures of phylogenetic diversity (variability and clustering). I evaluated the composition of the assemblages comparing distinct biogeographic subregions within the Mediterranean: Adriatic, Aegean, Balearic, Corsica–Sardinia, Crete, Gulf of Gabés, Ionian Sea, Ligurian Sea, Malta, Sicily, and Tyrrhenian Sea. The effect of island environments and geographical isolation on the diversity metrics was assessed using generalized linear models. The analyses indicated that species richness was mostly influenced by island area and geographical isolation. Assemblages on smaller islands were poorer in species and phylogenetically dispersed, possibly as an effect of interspecific competition. The species composition of the assemblages was determined by similar environmental drivers within the biogeographic subregions, including island area, island elevation, geographical isolation, and aridity. In several subregions, significant patterns of phylogenetic attraction were found in species co‐occurrences, caused by the limits imposed by the island size on large predatory species.

A new subspecies within the Salamandra algira species complex from north-western Africa is described. Previous molecular analysis showed that the populations of S. algira splendens from north-western Morocco consisted of two well supported clades: clade 1 distributed in the Rif Mountains, from Chefchaouen (type locality) to Al Hoceima, and clade 2, located southern from clade 1 being isolated in the northern and central Middle Atlas Mountains. Clade 2 is herein described as a distinct subspecies: Salamandra algira atlantica ssp. nov. based on morphological data, allopatric range and molecular divergence. This new subspecies shows an uncorrected pairwise distance of 0.0265 from clade 1 based on cytochrome b DNA sequences. Salamandra algira atlantica ssp. nov. is a slender and large sized salamander with a highly variable colouration pattern. It can be distinguished from S. algira splendens by the greater proportion of coral red in the background colouration, being the only known subspecies of S. algira in which coral red can exceed the proportion of black. Variable number (0–5) of yellow to golden yellow dorsal blotches, but usually in lower numbers than the nominotypical subspecies. Salamandra algira atlantica ssp. nov. inhabits subhumid to humid forests and karstic systems at mid to high elevations. We briefly discuss the phylogenetic and taxonomic issues among the genus Salamandra which encompasses more valid species than currently recognised.

Abstract Background Island species are vulnerable to rapid extinction, so it is important to develop accurate methods to determine their occurrence and habitat preferences. In this study, we assessed two methods for modeling the occurrence of the Corsican endemic Salamandra corsica, based on macro-ecological and fine habitat descriptors. We expected that models based on habitat descriptors would better estimate S. corsica occurrence, because its distribution could be influenced by micro-environmental gradients. The occurrence of S. corsica was modeled according to two ensembles of variables using random forests. Results Salamandra corsica was mainly found in forested habitats, with a complex vertical structure. These habitats are associated with more stable environmental conditions. The model based on fine habitat descriptors was better able to predict occurrence, and gave no false negatives. The model based on macro-ecological variables underestimated the occurrence of the species on its ecological boundary, which is important as such locations may facilitate interpopulation connectivity. Conclusions Implementing fine spatial resolution models requires greater investment of resources, but this is advisable for study of microendemic species, where it is important to reduce type II error (false negatives).

Background The western Mediterranean archipelagos have a rich endemic fauna, which includes five species of reptiles. Most of these archipelagos were colonized since early historic times by anthropochoric fauna, such as ship rats (Rattus rattus). Here, I evaluated the influence of ship rats on the occurrence of island reptiles, including non-endemic species. Methodology I analysed a presence-absence database encompassing 159 islands (Balearic Islands, Provence Islands, Corso-Sardinian Islands, Tuscan Archipelago, and Galite) using Bayesian-regularized logistic regression. Results The analysis indicated that ship rats do not influence the occurrence of endemic island reptiles, even on small islands. Moreover, Rattus rattus co-occurred positively with two species of non-endemic reptiles, including a nocturnal gecko, a guild considered particularly vulnerable to predation by rats. Overall, the analyses showed a very different pattern than that documented in other regions of the globe, possibly attributable to a long history of coexistence.

The fluvial systems in the north-east of the Iberian Peninsula are highly disturbed habitats, with widespread occurrence of alien species. Previous studies have shown that alien species have a major impact on native freshwater fauna, but it is not known what effect they have on semi-aquatic reptiles. Here the author investigated the factors that influence the occurrence of three species of semi-aquatic reptiles, one turtle (Mauremys leprosa) and two snakes (Natrix astreptophora and Natrix maura), at 261 sites in seven rivers/streams in Girona (north-eastern Spain). The studied semi-aquatic reptiles are habitat generalists which can occupy sections of rivers with altered regimes. The relationships of reptile presence to abiotic niche parameters and the presence of alien species were evaluated, as well as the patterns of pairwise co-occurrence between the reptiles. The presence of alien species did impact one out of three reptiles in this community. The association between both species of natricines was weakly negative, suggesting that interspecific competition does not structure their co-occurrences. The removal of alien species is the most appropriate strategy to preserve the complete diversity of native semi-aquatic reptiles.

South-western Europe has a rich diversity of lacertid lizards. In this study, we evaluated the occupancy patterns and niche segregation of five species of lacertids, focusing on large-bodied species (i.e., adults having >75 mm snout-vent length) that occur in south-western Europe (Italian to the Iberian Peninsula). We characterized the niches occupied by these species based on climate and vegetation cover properties. We expected some commonality among phylogenetically related species, but also patterns of habitat segregation mitigating competition between ecologically equivalent species. We used multivariate ordination and probabilistic methods to describe the occupancy patterns and evaluated niche evolution through phylogenetic analyses. Our results showed climate niche partitioning, but with a wide overlap in transitional zones, where segregation is maintained by species-specific responses to the vegetation cover. The analyses also showed that phylogenetically related species tend to share large parts of their habitat niches. The occurrence of independent evolutionary lineages contributed to the regional species richness favored by a long history of niche divergence.

Background Congeneric species of reptiles frequently exhibit partitioning in terms of their use of habitats or trophic resources in order to reduce competition. In this study, we investigated habitat use by two species of European skinks: Chalcides bedriagai and Chalcides striatus, based on 49 records from southern France, Spain, and Portugal. Methods We measured three levels of niche descriptors: macroscale (climate, topography, and substrate), mesoscale (plant associations), and microscale (vegetation cover and shelters). We assessed the associations between these environmental descriptors and the occurrence of the skinks. Results Our results showed that the two species occupied opposite extremes of the ecological gradient i.e., C. bedriagai in semi-arid environments and C. striatus in temperate-oceanic environments, but there was broad ecological overlap in transitional climates at all of the habitat scales examined. This overlap was demonstrated by the presence of syntopy in geographically distant sites with different environmental characteristics. Discussion The morphological differences between the two species, and possibly their different use of microhabitats, might favor this mesoscale overlap between congeneric species, which is relatively unusual in Mediterranean lizards.

The composition and diversity of biotic assemblages is regulated by a complex interplay of environmental features. We investigated the influence of climate and the aquatic habitat conditions on the larval traits and the structure of amphibian larval guilds in north-western Africa. We classified the species into morphological groups, based on external traits: body shape, size, and the relative positions of the eyes and oral apparatus. We characterized the guild diversity based on species richness and interspecific phylogenetic/functional relationships. The larvae of the urodeles were classified as typical of either the stream or pond type, and the anurans as typical of either the lentic-benthic or lentic-nektonic type. The variations in the body shapes of both urodeles and anurans were associated with the type of aquatic habitat (lentic vs lotic) and the types of predators present. Most of the urodele guilds (98.9%) contained a single species, whereas the anuran guilds were usually more diverse. Both the phylogenetic and functional diversity of the anuran guilds were positively influenced by the size of the aquatic habitat and negatively by aridity. In anurans, the benthic and nektonic morphological types frequently co-occurred, possibly influenced by their opportunistic breeding strategies.

Salamandra algira is one of the southernmost species of the genus, and most of its ecology remains poorly known. We studied the microhabitat conditions of the sites occupied by several populations of S. algira along an altitudinal gradient, and the use of water bodies for reproduction. The microclimate conditions were analysed at six sites in northern Morocco: one site in Beni Snassen massif (S. algira spelaea), two in the Middle Atlas and central Rif mountains (S. algira splendens), and three in the western Rif mountains and Peninsula Tingitana (S. algira tingitana), where a viviparous population also occurs. The microclimate was characterized using temperature and relative humidity data loggers for a period of two years. We also measured the surface area and depth of the water bodies where we found S. algira larvae. Our results showed an autumn-winter reproductive period for all ovoviviparous populations studied. In most of the aquatic habitats examined, larvae appeared between November and March, although this period could extend to May at higher altitudes. Larval abundance and their size variability did not correlate with water body size or microclimate conditions. The decrease in the number of larvae per water body coincided with the existence of suitable conditions for post-metamorphic dispersal. Salamandra algira occurred in regions with moist conditions (annual average relative humidity greater than 64 %) and with mean annual temperatures of 13.6-18.6 °C, but populations were largely segregated along a gradient of humidity, with some showing higher and more constant values than others. The viviparous population occurs in a region with maritime influence and greater microclimate stability than the other sites studied.