9 results on '"D-L, Nguyen"'
Search Results
2. Carbonaceous aerosol composition in air masses influenced by large-scale biomass burning: a case study in northwestern Vietnam
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D.-L. Nguyen, H. Czech, S. M. Pieber, J. Schnelle-Kreis, M. Steinbacher, J. Orasche, S. Henne, O. B. Popovicheva, G. Abbaszade, G. Engling, N. Bukowiecki, N.-A. Nguyen, X.-A. Nguyen, and R. Zimmermann
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Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
We investigated concentrations of organic carbon (OC), elemental carbon (EC), and a wide range of particle-bound organic compounds in daily sampled PM2.5 at the remote Pha Din (PDI) – Global Atmosphere Watch (GAW) monitoring station in northwestern Vietnam during an intense 3-week sampling campaign from 23 March to 12 April 2015. The site is known to receive trans-regional air masses during large-scale biomass burning (BB) episodes. BB is a globally widespread phenomenon and BB emission characterization is of high scientific and societal relevance. Emissions composition is influenced by multiple factors (e.g., fuel and thereby vegetation type, fuel moisture, fire temperature, available oxygen). Due to regional variations in these parameters, studies in different world regions are needed. OC composition provides valuable information regarding the health- and climate-relevant properties of PM2.5. Yet, OC composition studies from PDI are missing in the scientific literature to date. Therefore, we quantified 51 organic compounds simultaneously by in situ derivatization thermal desorption gas chromatography and time-of-flight mass spectrometry (IDTD-GC-TOFMS). Anhydrosugars, methoxyphenols, n-alkanes, fatty acids, polycyclic aromatic hydrocarbons, oxygenated polycyclic aromatic hydrocarbons, nitrophenols, and OC were used in a hierarchical cluster analysis highlighting distinctive patterns for periods under low, medium, and high BB influence. The highest particle phase concentration of the typical primary organic aerosol (POA) and possible secondary organic aerosol (SOA) constituents, especially nitrophenols, were found on 5 and 6 April. We linked the trace gas mixing ratios of methane (CH4), carbon dioxide (CO2), carbon monoxide (CO), and ozone (O3) to the statistical classification of BB events based on OA composition and found increased CO and O3 levels during medium and high BB influence. Likewise, a backward trajectory analysis indicates different source regions for the identified periods based on the OA clusters, with cleaner air masses arriving from the northeast, i.e., mainland China and the Yellow Sea. The more polluted periods are characterized by trajectories from the southwest, with more continental recirculation of the medium cluster and more westerly advection for the high cluster. These findings highlight that BB activities in northern Southeast Asia significantly enhance the regional organic aerosol loading and also affect the carbonaceous PM2.5 constituents and the trace gases in northwestern Vietnam. The presented analysis adds valuable data on the carbonaceous and chemical composition of PM2.5, in particular of OC, in a region of scarce data availability, and thus offers a reference dataset from Southeast Asian large-scale BB for future studies. Such a reference dataset may be useful for the evaluation of atmospheric transport simulation models, or for comparison with other world regions and BB types, such as Australian bush fires, African savannah fires, or tropical peatland fires.
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- 2021
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3. A multi-omics analysis reveals the unfolded protein response regulon and stress-induced resistance to folate-based antimetabolites
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Stefan Reich, Chi D. L. Nguyen, Canan Has, Sascha Steltgens, Himanshu Soni, Cristina Coman, Moritz Freyberg, Anna Bichler, Nicole Seifert, Dominik Conrad, Christiane B. Knobbe-Thomsen, Björn Tews, Grischa Toedt, Robert Ahrends, and Jan Medenbach
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Science - Abstract
The unfolded protein response (UPR) is a stress response pathway implicated in numerous diseases and chemotherapy resistance. Here, the authors define the UPR regulon with a multi-omics strategy, uncovering changes to mitochondrial one-carbon metabolism and concomitant resistance to folate-based therapeutics.
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- 2020
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4. Intracellular Lipid Accumulation and Mitochondrial Dysfunction Accompanies Endoplasmic Reticulum Stress Caused by Loss of the Co-chaperone DNAJC3
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Matthew J. Jennings, Denisa Hathazi, Chi D. L. Nguyen, Benjamin Munro, Ute Münchberg, Robert Ahrends, Annette Schenck, Ilse Eidhof, Erik Freier, Matthis Synofzik, Rita Horvath, and Andreas Roos
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proteomics ,cholesterol-stress ,mitochondria ,DNAJC3 ,unfolded protein response (UPR) ,Biology (General) ,QH301-705.5 - Abstract
Recessive mutations in DNAJC3, an endoplasmic reticulum (ER)-resident BiP co-chaperone, have been identified in patients with multisystemic neurodegeneration and diabetes mellitus. To further unravel these pathomechanisms, we employed a non-biased proteomic approach and identified dysregulation of several key cellular pathways, suggesting a pathophysiological interplay of perturbed lipid metabolism, mitochondrial bioenergetics, ER-Golgi function, and amyloid-beta processing. Further functional investigations in fibroblasts of patients with DNAJC3 mutations detected cellular accumulation of lipids and an increased sensitivity to cholesterol stress, which led to activation of the unfolded protein response (UPR), alterations of the ER-Golgi machinery, and a defect of amyloid precursor protein. In line with the results of previous studies, we describe here alterations in mitochondrial morphology and function, as a major contributor to the DNAJC3 pathophysiology. Hence, we propose that the loss of DNAJC3 affects lipid/cholesterol homeostasis, leading to UPR activation, β-amyloid accumulation, and impairment of mitochondrial oxidative phosphorylation.
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- 2021
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5. Data Independent Acquisition Mass Spectrometry for Proteomic Advances into Isolated Methylmalonic Acidemia
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Margherita Ruoppolo, Marianna Caterino, Armando Cevenini, Olga Shevchuk, Chi D. L. Nguyen, Michele Costanzo, Albert Sickmann, Laxmikanth Kollipara, Costanzo, M., Caterino, M., Cevenini, A., Kollipara, L., Shevchuk, O., Nguyen, C. D. L., Sickmann, A., and Ruoppolo, M.
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chemistry.chemical_classification ,congenital, hereditary, and neonatal diseases and abnormalities ,Enzyme ,Mutase ,Biochemistry ,Chemistry ,Catabolism ,HEK 293 cells ,Proteome ,Data-independent acquisition ,Gene ,Gene knockout - Abstract
In order to study altered molecular mechanisms representative of the damage induced by the disease in patients, two HEK293 cell models were developed. The first model was obtained with CRISPR/CAS9-based MUT gene knock out (MUT-KO). The second cell model derived from a MUT-KO cell line engineered to rescue the stable expression of MUT protein (MUT-RES). To track the quantitative changes in the global proteome of MUT-KO and MUT-RES cells, a Data Independent Acquisition mass spectrometry-based proteomic experiment was performed.Results and Discussion: Isolated methylmalonic acidemia (MMA) is a rare inherited metabolic disease of propionyl-CoA and branched-chain amino acids catabolism that affects 1 in 100,000 newborn babies. It is caused by a total or partial deficiency of methylmalonyl-CoA mutase enzymatic activity (MUT0 and MUT- subtypes, respectively). Mutations in methylmalonyl-CoA mutase (MUT) gene impair the mitochondrial conversion of methylmalonyl-CoA to succinyl-CoA, metabolized within the Krebs cycle.
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- 2020
6. PERK-mediated expression of peptidylglycine α-amidating monooxygenase supports angiogenesis in glioblastoma
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Julia Bode, Chi D. L. Nguyen, Robert Ahrends, Betty A. Eipper, Himanshu Soni, Jonas Bub, Violaine Goidts, Michelle Neßling, Björn Tews, Rosario M. Piro, Laura Puccio, and Emma Phillips
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0301 basic medicine ,Cancer Research ,endocrine system ,Angiogenesis ,lcsh:RC254-282 ,Article ,03 medical and health sciences ,0302 clinical medicine ,stomatognathic system ,In vivo ,parasitic diseases ,Molecular Biology ,reproductive and urinary physiology ,Gene knockdown ,Kinase ,Chemistry ,Activator (genetics) ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,In vitro ,Cell biology ,CNS cancer ,Cytosol ,030104 developmental biology ,Cytoplasm ,030220 oncology & carcinogenesis ,embryonic structures ,Tumour angiogenesis - Abstract
PKR-like kinase (PERK) plays a significant role in inducing angiogenesis in various cancer types including glioblastoma. By proteomics analysis of the conditioned medium from a glioblastoma cell line treated with a PERK inhibitor, we showed that peptidylglycine α-amidating monooxygenase (PAM) expression is regulated by PERK under hypoxic conditions. Moreover, PERK activation via CCT020312 (a PERK selective activator) increased the cleavage and thus the generation of PAM cleaved cytosolic domain (PAM sfCD) that acts as a signaling molecule from the cytoplasm to the nuclei. PERK was also found to interact with PAM, suggesting a possible involvement in the generation of PAM sfCD. Knockdown of PERK or PAM reduced the formation of tubes by HUVECs in vitro. Furthermore, in vivo data highlighted the importance of PAM in the growth of glioblastoma with reduction of PAM expression in engrafted tumor significantly increasing the survival in mice. In summary, our data revealed PAM as a potential target for antiangiogenic therapy in glioblastoma.
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- 2020
7. Investigation of blood cell properties using laser diffractometry and kinetic nephelometry
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V A Loban, S A Kavalenka, A I Kavalenka, V V Popov, and T D L Nguyen
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History ,Nephelometer ,Chemistry ,Analytical chemistry ,Laser ,Kinetic energy ,Computer Science Applications ,Education ,law.invention ,Blood cell ,medicine.anatomical_structure ,law ,Microscopy ,medicine ,Nephelometry - Abstract
The portable multi-channel laser nephelometer was developed and applied for quantitative and qualitative researches of blood cells. Obtained findings were analyzed in comparison with results of laser diffractometry and microscopy.
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- 2014
8. Promising Stability of Gold-Based Catalysts Prepared by Direct Anionic Exchange for DeNO x Applications in Lean Burn Conditions
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Shubhangi B. Umbarkar, Pascal Granger, Christine Lancelot, Mohan K. Dongare, Jean-Sébastien Girardon, Christophe Dujardin, D.-L. Nguyen, Unité de Catalyse et Chimie du Solide - UMR 8181 (UCCS), Université d'Artois (UA)-Centrale Lille-Institut de Chimie du CNRS (INC)-Université de Lille-Centre National de la Recherche Scientifique (CNRS), National Chemical Laboratory (NCL), Council of Scientific and Industrial Research [India] (CSIR), Centrale Lille Institut (CLIL)-Université d'Artois (UA)-Centrale Lille-Centre National de la Recherche Scientifique (CNRS)-Institut de Chimie du CNRS (INC)-Université de Lille, and National Chemical Laboratory (INDIA)
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Diesel exhaust ,Chemistry ,Inorganic chemistry ,Selective catalytic reduction ,02 engineering and technology ,General Chemistry ,Thermal treatment ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,7. Clean energy ,Catalysis ,0104 chemical sciences ,Deposition precipitation ,13. Climate action ,[CHIM]Chemical Sciences ,Thermal ageing ,0210 nano-technology ,Lean burn ,ComputingMilieux_MISCELLANEOUS - Abstract
Supported gold catalysts on γ-Al2O3 have been investigated in the catalytic reduction of NO x in simulated Diesel exhaust gas conditions. Different parameters have been examined essentially the mode of gold incorporation via classical deposition–precipitation and anionic exchange methods and the nature of the pre-activation thermal treatment. The resistance to thermal ageing under reactive conditions at 500 °C was found completely different with a significant rate enhancement on anionic-exchange samples. Further comparisons also show that the nature of the pre-activation thermal treatment influences the extent of surface reconstructions during thermal ageing with a detrimental effect of reductive pre-treatment on the catalytic performances.
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- 2013
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9. production and characterization of human renin antibodies with region-oriented synthetic peptides
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Bertrand Castro, F X Galen, D L Nguyen, Jacob Bouhnik, Pierre Corvol, René Seyer, Pierre Fulcrand, Joël Ménard, Jean-Alain Fehrentz, Fehrentz, Jean-Alain, Pathologie vasculaire et endocrinologie rénale - Chaire de médecine expérimentale (INSERM U36), Collège de France (CdF (institution))-Institut National de la Santé et de la Recherche Médicale (INSERM), Centre CNRS-INSERM de Pharmacologie Endocrinologie (CCIPE), and CCIPE
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medicine.drug_class ,Macromolecular Substances ,Submandibular Gland ,Radioimmunoassay ,renin antibodies synthetic peptide ,Peptide ,Enzyme-Linked Immunosorbent Assay ,Monoclonal antibody ,Biochemistry ,Plasma renin activity ,Antibodies ,03 medical and health sciences ,Epitopes ,Mice ,Renin–angiotensin system ,Renin ,medicine ,Animals ,Humans ,Computer Simulation ,Amino Acid Sequence ,Bovine serum albumin ,Molecular Biology ,ComputingMilieux_MISCELLANEOUS ,030304 developmental biology ,chemistry.chemical_classification ,Antiserum ,0303 health sciences ,biology ,[CHIM.ORGA]Chemical Sciences/Organic chemistry ,030302 biochemistry & molecular biology ,Cell Biology ,[CHIM.ORGA] Chemical Sciences/Organic chemistry ,Amino acid ,chemistry ,Polyclonal antibodies ,biology.protein - Abstract
Polyclonal and monoclonal antibodies were raised against pure human renin, but nothing was known about the regions against which they were directed. Using a three-dimensional model of mouse submandibular renin, we selected seven peptide sequences as belonging to potential epitopes. The main criteria for their choice were the location of the peptide sequences near the catalytic region and on the surface of the renin molecule and their hydrophilicity. After transposition of the regions to the 340-amino acid sequence of human renin, the seven peptides (corresponding to amino acids 50-60, 63-71, 81-90, 118-126, 162-169, 247-255, and 287-295) were synthesized, coupled to bovine serum albumin, and injected into rabbits. Five of these peptides elicited antibodies, and 50-68% binding of the corresponding iodinated peptide was obtained with a 1:25 dilution of antiserum. The antisera titers ranged from 1:5,000 to 1:100,000 when tested by enzyme-linked immunosorbent assay. The same antisera bound 15-65% of labeled pure human renin at a final dilution of 1:2.5, the highest percentage being obtained with peptide 81-90 antiserum. At a 1:5 dilution, the five antisera inhibited renin activity by 23-68% in human plasma with a high renin activity (40 ng of angiotensin I/h/ml). At a final dilution of 1:50, peptide 81-90 antiserum was still capable of producing 25% inhibition. Purified IgG (0.6 mg) from this antiserum inhibited pure human renin activity by up to about 40%, as measured by its reaction with pure synthetic human tetradecapeptide substrate. Antigenic peptides that mimic a part of the human renin sequence, especially peptide 81-90 representing the "flap" covering the cleft between the two renin lobes, constitute promising tools for the development of a synthetic antirenin vaccine.
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- 1987
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