3,948 results on '"Crop Genetics"'
Search Results
2. High-Throughput Phenotyping: Application in Maize Breeding.
- Author
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Resende, Ewerton Lélys, Bruzi, Adriano Teodoro, Cardoso, Everton da Silva, Carneiro, Vinícius Quintão, Pereira de Souza, Vitório Antônio, Frois Correa Barros, Paulo Henrique, and Pereira, Raphael Rodrigues
- Subjects
- *
CORN breeding , *HYBRID corn , *LEAF area index , *GRAIN yields , *DRONE aircraft - Abstract
In breeding programs, the demand for high-throughput phenotyping is substantial as it serves as a crucial tool for enhancing technological sophistication and efficiency. This advanced approach to phenotyping enables the rapid and precise measurement of complex traits. Therefore, the objective of this study was to estimate the correlation between vegetation indices (VIs) and grain yield and to identify the optimal timing for accurately estimating yield. Furthermore, this study aims to employ photographic quantification to measure the characteristics of corn ears and establish their correlation with corn grain yield. Ten corn hybrids were evaluated in a Complete Randomized Block (CRB) design with three replications across three locations. Vegetation and green leaf area indices were estimated throughout the growing cycle using an unmanned aerial vehicle (UAV) and were subsequently correlated with grain yield. The experiments consistently exhibited high levels of experimental quality across different locations, characterized by both high accuracy and low coefficients of variation. The experimental quality was consistently significant across all sites, with accuracy ranging from 79.07% to 95.94%. UAV flights conducted at the beginning of the crop cycle revealed a positive correlation between grain yield and the evaluated vegetation indices. However, a positive correlation with yield was observed at the V5 vegetative growth stage in Lavras and Ijaci, as well as at the V8 stage in Nazareno. In terms of corn ear phenotyping, the regression coefficients for ear width, length, and total number of grains (TNG) were 0.92, 0.88, and 0.62, respectively, demonstrating a strong association with manual measurements. The use of imaging for ear phenotyping is promising as a method for measuring corn components. It also enables the identification of the optimal timing to accurately estimate corn grain yield, leading to advancements in the agricultural imaging sector by streamlining the process of estimating corn production. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
3. High-Throughput Phenotyping: Application in Maize Breeding
- Author
-
Ewerton Lélys Resende, Adriano Teodoro Bruzi, Everton da Silva Cardoso, Vinícius Quintão Carneiro, Vitório Antônio Pereira de Souza, Paulo Henrique Frois Correa Barros, and Raphael Rodrigues Pereira
- Subjects
crop genetics ,biometrics ,data acquisition and assimilation ,Agriculture (General) ,S1-972 ,Engineering (General). Civil engineering (General) ,TA1-2040 - Abstract
In breeding programs, the demand for high-throughput phenotyping is substantial as it serves as a crucial tool for enhancing technological sophistication and efficiency. This advanced approach to phenotyping enables the rapid and precise measurement of complex traits. Therefore, the objective of this study was to estimate the correlation between vegetation indices (VIs) and grain yield and to identify the optimal timing for accurately estimating yield. Furthermore, this study aims to employ photographic quantification to measure the characteristics of corn ears and establish their correlation with corn grain yield. Ten corn hybrids were evaluated in a Complete Randomized Block (CRB) design with three replications across three locations. Vegetation and green leaf area indices were estimated throughout the growing cycle using an unmanned aerial vehicle (UAV) and were subsequently correlated with grain yield. The experiments consistently exhibited high levels of experimental quality across different locations, characterized by both high accuracy and low coefficients of variation. The experimental quality was consistently significant across all sites, with accuracy ranging from 79.07% to 95.94%. UAV flights conducted at the beginning of the crop cycle revealed a positive correlation between grain yield and the evaluated vegetation indices. However, a positive correlation with yield was observed at the V5 vegetative growth stage in Lavras and Ijaci, as well as at the V8 stage in Nazareno. In terms of corn ear phenotyping, the regression coefficients for ear width, length, and total number of grains (TNG) were 0.92, 0.88, and 0.62, respectively, demonstrating a strong association with manual measurements. The use of imaging for ear phenotyping is promising as a method for measuring corn components. It also enables the identification of the optimal timing to accurately estimate corn grain yield, leading to advancements in the agricultural imaging sector by streamlining the process of estimating corn production.
- Published
- 2024
- Full Text
- View/download PDF
4. Exploitation of Male Sterility for Heterosis Breeding in Vegetable Crops.
- Author
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Singh, Jagmeet, Sharma, Akhilesh, Chauhan, Shivani, and Richa
- Subjects
HETEROSIS in plants ,PLANT breeding ,MALE sterility in plants ,PLANT genetics ,GENETIC markers in plants ,CROP genetics ,CROP yields - Abstract
This document provides a comprehensive overview of the use of male sterility in vegetable crops for hybrid breeding. It explains the different types of male sterility, such as cytoplasmic male sterility (CMS) and cytoplasmic-genic male sterility (CGMS), and their applications in crops like onion, carrot, chilli, and cabbage. The document also discusses the use of chemically induced male sterility as an alternative method. It emphasizes the importance of developing resistant hybrids and using molecular markers in vegetable crop production. The document is a compilation of research articles and reviews that cover a range of plant species and provide valuable information for researchers and breeders interested in developing hybrid varieties of these crops. [Extracted from the article]
- Published
- 2024
- Full Text
- View/download PDF
5. Screening of Different Genotypes/Varieties of Greengram against Spotted Pod Borer, Maruca vitrata (Fabricius).
- Author
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Bhuva, K. J. and Patel, S. D.
- Subjects
MUNG bean ,BEAN varieties ,CROP genetics ,GENOTYPES ,BORERS (Insects) ,BEAN diseases & pests ,GRAIN yields - Abstract
This article presents the findings of a study on the resistance of different genotypes/varieties of greengram to the spotted pod borer, Maruca vitrata. The study categorized the genotypes/varieties based on larval population and pod damage, and found that four of them were resistant to M. vitrata. The study also measured grain yield and found that one genotype, VSGG 9, had the highest yield. The authors suggest that screening for resistance is an effective way to identify resistant genotypes/varieties. The article provides valuable information on the challenges posed by insect pests to greengram cultivation in India. [Extracted from the article]
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- 2024
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6. Estimation of Simple Correlation and Genetic Variability Studies in F2 Population of Three Different Crosses in Bhendi (Abelmoschus esculentus L. Moench).
- Author
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Madhumitha, Y. and Kumar, P. Senthil
- Subjects
OKRA ,CROP genetics ,HERITABILITY ,CROP yields ,PLANT size - Abstract
The article discusses a study conducted in India that examined the correlation and genetic variability of different traits in three crosses of okra plants. The researchers found that certain traits, such as the number of fruits per plant and fruit weight, were highly correlated with fruit yield. They also observed high heritability and genetic advance in two of the crosses, indicating the influence of additive gene action. The study suggests that selecting plants based on these traits could lead to improved yield in okra breeding programs. [Extracted from the article]
- Published
- 2024
- Full Text
- View/download PDF
7. Influence of High-Sugar Early and Mid-Late Genotypes on Yield and Quality of Sugarcane (Saccharum spp. Hybrid Complex) at Wider Row Spacing.
- Author
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Kumar, Navnit, Rana, Lalita, Sow, Sumit, Kumar, Jyotish, Kumar, Anil, Singh, Sidh Nath, and Singh, A. K.
- Subjects
SUGARCANE ,CROP yields ,GENOTYPES ,CROP genetics ,PLANT spacing ,AGRICULTURAL productivity ,AGRICULTURAL research - Abstract
This article presents the findings of a field experiment conducted in Pusa, Bihar, which aimed to assess the impact of high-sugar early and mid-late genotypes on the yield and quality of sugarcane. The study compared different genotypes and row spacing and found that certain genotypes, such as 'CoP 11436' and 'BO 155', had higher tillers, millable canes, cane yield, and sugar yield. Additionally, wider row spacing was found to contribute to increased biomass and sugar yield. The results emphasize the importance of selecting the appropriate genotype and row spacing for optimal sugarcane productivity. The document also provides data on the performance of various sugarcane genotypes in terms of leaf area index, millable canes, cane and sugar yield, and quality parameters such as brix, pol, purity, and commercial cane sugar. The findings indicate that early maturing genotypes CoP 11436 and CoSe 11451 had higher cane and sugar yield, while mid-late maturing genotype CoSe 11455 performed well in terms of cane and sugar yield. The quality parameters varied among the genotypes, with some genotypes exhibiting higher brix, pol, purity, and commercial cane sugar. Overall, the study suggests that certain genotypes can be recommended for commercial cultivation based on their performance. [Extracted from the article]
- Published
- 2024
- Full Text
- View/download PDF
8. Evaluation of Genetic Characteristics of Introduced Mung Bean Varieties Based on Agronomic Traits †.
- Author
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Tran, My Thi Thao and Truong, Ngon Trong
- Subjects
MUNG bean ,AGRONOMY ,CROP genetics ,CROP yields - Abstract
Mung beans make up a relatively large part of the daily needs of every Vietnamese family. However, mung bean yield in the Mekong Delta is still low, and variety is one of the main factors affecting this problem. Therefore, the study of new varieties with a high yield and adaptability to different environmental conditions is extremely necessary. We evaluated genetic characteristics such as productivity and growth time of the introduced mung beans based on agronomic traits (plant height at flowering, plant height at harvesting, number of internodes, number of branches, number of pods plant
−1 , and theoretical yield), thereby creating a database of genetic characteristics for further breeding programs. The results showed that the mature pods of all varieties were harvested up to two times after one planting season. The broad-sense heritability of studied traits including plant height at flowering and harvesting, number of internodes and branches, number of pods plant−1 , and theoretical yield varied from 15.57% to 85.71% in the first harvest and from 68.45% to 89.58% in the second harvest. It can be seen that these traits were influenced by the environment. Hence, it is important to choose appropriate seasons to enhance the potential of the mung bean variety. Moreover, the correlation coefficient results showed a strong positive relationship between yield and the number of pods per plant, indicating that the number of pods plant−1 is one of the important factors affecting mung bean yield. Based on important agronomic traits including the number of pods per plant, 1000 seeds' weight, growth time, and yield, two promising mung bean varieties were selected, which were VC 6494-986-S7 and VC 6518-50. Our results provided useful information for improving the yield of mung beans as well as contributing to the introduced mung bean breeding program in Vietnam. [ABSTRACT FROM AUTHOR]- Published
- 2023
- Full Text
- View/download PDF
9. Speed Breeding for Crop Improvement and Food Security.
- Author
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Potts, Jesse, Jangra, Sumit, Michael, Vincent N., and Wu, Xingbo
- Subjects
- *
CROP improvement , *FOOD security , *CROP genetics , *PLANT breeding , *PLANT populations - Abstract
Amid a rapidly growing global population and increasing threats to crop yields, this review focuses on Speed Breeding (SB) in crop genetics. It traces SB's development from carbon arc lamp experiments 150 years ago to its modern use with LED technology which significantly accelerates breeding cycles. SB has applications in genetic mapping, genetic modification, and trait stacking, enhancing crop resilience by leveraging allelic diversity. It aligns well with breeding methods like single plant selection and single seed descent. The integration of SB with gene editing, genotyping, and genomic selection holds great promise. However, SB faces challenges related to infrastructure, genotypic variations, and potential stress responses. In summary, SB is a powerful and promising approach to address food security concerns and advancing crop genetics. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
10. Grain yield stability analysis using parametric and nonparametric statistics in oat (Avena sativa L.) genotypes in Ethiopia.
- Author
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Kebede, Gezahagn, Worku, Walelign, Jifar, Habte, and Feyissa, Fekede
- Subjects
- *
OATS , *GRAIN yields , *CROP genetics , *AGRICULTURAL statistics , *CROP improvement - Abstract
Background: The performance of oat genotypes differs across environments due to variations in biotic and abiotic factors. Thus, evaluation of oat genotypes across diverse environments is very important to identify superior and stable genotypes for yield improvement. Methods: The study aimed to assess the interaction (genotype‐by‐environment interaction; GEI) effect and determine the stability of grain yield in oat (Avena sativa L.) genotypes in Ethiopia using parametric and nonparametric stability statistics. Twenty‐four oat genotypes were evaluated in nine environments using a randomized complete block design replicated three times. Results: The pooled analysis of the variance of grain yield showed significant variations among genotypes, environments, and their interaction effects. Significant GEI revealed the rank order change of genotypes across environments. The environment main effect captured 44.62% of the total grain yield variance, while genotype and GEI effects explained 28.84% and 26.54% of the total grain yield variance, respectively. The grain yield stability was assessed based on 12 parametric and two nonparametric stability statistics. The results indicated that genotypes with superior grain yield‐ showed stable performance on the basis of the stability parameters of the genotypic superiority index (Pi), the Perkins and Jinks adjusted linear regression coefficient (Bi), and the yield stability index (YSI), indicating that selection using these stability parameters would be efficient for grain yield enhancement in oat genotypes. Spearman's rank correlation coefficients also showed that the stability parameters of Pi, Bi, and YSI had a significant positive association with grain yield. However, grain yield had an inverse correlation with the stability parameters of standard deviation, deviation from regression (Sdi2), the Hernandez desirability index (Dji), Wricke ecovalence (Wi), the Shukla stability variance (σi2), the AMMI stability value (ASV), and environmental variance (S(2)i), indicating that oat genotype selection using these stability parameters would not be efficient for yield enhancement because these stability parameters favor low‐yielding genotypes more, compared to high‐yielding ones. Conclusions: Therefore, G5, G8, G11, G12, G14, G16, G17, G19, and G22 genotypes were adaptable in all nine environments based on stability parameters of Pi, Bi, and YSI, and selection of these superior genotypes would improve grain yield in oat genotypes. However, the validity of this result should be confirmed by repeating the experiment in the same environments over two or more years. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
11. Genetic Variability, Heritability, Genetic Advance for Yield and Yield Related Attributes in Chickpea (Cicer arietinum L.).
- Author
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Prathyusha, Ayyala, Kumar, Devarakonda Uday Kiran, and Parveen, Shama
- Subjects
CHICKPEA yields ,CROP genetics ,HERITABILITY ,GENOTYPES ,PHENOTYPES ,GERMINATION ,PLANT size - Abstract
This article, published in the journal Environment & Ecology, explores the genetic variability, heritability, and genetic advance for yield and yield-related attributes in chickpea (Cicer arietinum L.). The study was conducted with 30 chickpea genotypes and found high significance for all 13 traits studied. The traits of primary branches, secondary branches, pods per plant, yield per plant, and seedling length showed high estimates of phenotypic and genotypic coefficient of variation, indicating wide variability. The heritability of these traits was due to additive gene effects, which can aid breeders in selecting plants based on phenotypic expression. [Extracted from the article]
- Published
- 2024
- Full Text
- View/download PDF
12. Annex F. Crop Management Practices.
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CROP management ,CROP genetics ,TRANSGENIC plants ,PLANT growth ,PLANT health - Published
- 2023
- Full Text
- View/download PDF
13. Agronomical traits performance and variability of the SSD F4 mungbean population.
- Author
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SUTJAHJO, SURJONO HADI, KHOLISOH, NUR, MAULIDA, HESTI, MARWIYAH, SITI, JAMBORMIAS, EDIZON, and WIRNAS, DESTA
- Subjects
- *
MUNG bean , *AGRONOMY , *CULTIVARS , *CROP genetics , *SEEDS - Abstract
Genetic variability is critical in order to create candidates for new superior varieties. This research objective was to evaluate the performance and variability of agronomical traits on the mungbean SSD on F4 V422H/129 population. The research was conducted at IPB University, Bogor, from March to June 2021. The SSD on F4 VR422H/129 population (378 genotypes with single plant as a representative of one genotype) and five check varieties were evaluated. The treatments were arranged in augmented design for RCBD in three replications. For agronomical traits, every F4 plant and 10 sample plants for each check variety were observed. Statistical analysis includes mean, frequency-distribution, heritability, genetic variability, correlation. The days to flowering, days to harvesting, generative periods, plant height on F4 V422H/129 were not significantly different from Vima 5, while total pod number, total pod weight, total seed weight, pod length were significantly higher. The agronomical traits were affected by genetic factors (heritability 0.71-0.99%), except for days to harvest. Based on the high genetic variability (CGV 0.62-0.64%), it was possible to select of total pod weight, total seed weight, or pod length in the next generation V422H/129. The total seed weight had a significant positive correlation with total pod weight and pod length. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
14. Editorial: Genomics in plant sciences: understanding and development of stress-tolerant plants
- Author
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Ayaz Mahmood Dar, Hussain Touseef, Kashif Nawaz, Yusuf Khan, and Pranav Pankaj Sahu
- Subjects
genomics ,crop genetics ,breeding ,genome-wide studies ,multi-omics ,abiotic ,Plant culture ,SB1-1110 - Published
- 2023
- Full Text
- View/download PDF
15. Editorial: Genomics in plant sciences: understanding and development of stress-tolerant plants.
- Author
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Dar, Ayaz Mahmood, Touseef, Hussain, Nawaz, Kashif, Khan, Yusuf, and Sahu, Pranav Pankaj
- Subjects
PLANT development ,GENOMICS ,MULTIOMICS ,BOTANY - Published
- 2023
- Full Text
- View/download PDF
16. Mapping and Validation of Alectra vogelii Resistance in the Cowpea Landrace B301.
- Author
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Ohlson, Erik W. and Timko, Michael P.
- Subjects
- *
COWPEA , *SINGLE nucleotide polymorphisms , *GENETIC markers - Abstract
Cowpea is the most important food legume in West and Central Africa and a valuable economic commodity in the region. Among the major biotic constraints to cowpea production are root parasitic weeds of which Alectra vogelii (Benth.) is of increasing importance. The cowpea landrace B301 was previously identified as a source of Alectra resistance, but neither the genes nor genomic loci conferring this resistance have been mapped. Therefore, to map and identify genetic markers linked to Alectra resistance for use in the molecular improvement of cowpea, we developed an F2 population from a cross of the susceptible variety 524B with B301. The population was phenotyped for resistance to A. vogelii and genotyped with a cowpea high density single nucleotide polymorphism (SNP) microarray. Putative resistance loci were mapped in F2 populations by categorical trait–multiple interval mapping and validated by selective genotyping. Selective genotyping indicated that the resistance loci on Vu04 (Rav1) and Vu11 (Rav2) were significantly associated with resistance (p ≤ 0.01). Using marker assisted backcrossing, the two resistance loci were introgressed independently into the susceptible 524B genetic background. Phenotyping and genotyping of the segregating backcross families delineated Rav1 to a 10 cM on chromosome 4 and Rav2 to a 6.7 cM interval in chromosome 11. These two loci are desirable for breeding Alectra resistant cowpea varieties due to their simple inheritance and ability to independently confer complete immunity to the parasite. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
17. Hybrid Seeds in History and Historiography.
- Author
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Curry, Helen Anne
- Subjects
- *
SEEDS , *PLANT breeding , *PLANT hybridization , *AGRICULTURAL innovations , *INDUSTRIALIZATION , *CROP genetics , *CROP development - Abstract
Accounts of twentieth-century agricultural industrialization in the United States and beyond often center the production and distribution of commercial F1 hybrid seeds as a pivotal development. The commercialization of hybrid corn seeds in the 1930s was initially heralded as a science-driven advance in agricultural productivity. However, since the 1970s "hybrid seeds" have been linked to many perceived perils attendant on industrialized agriculture, from the undermining of farmers' independence to the diminishment of crop genetic diversity to the consolidation of corporate control over the global food system. First grouped with the semidwarf varieties of the Green Revolution to emblematize capital- and chemical-intensive agriculture, hybrids are today often lumped together with genetically modified varieties for much the same reason. This essay revisits the scholarship that helped produce this understanding of hybrid seeds. It explores how and why the singular history of hybrid corn inflected understandings of crop breeding and seed production in general, contributing to lasting confusion about the promises and pitfalls of distinct approaches to crop development and the nature of hybrid seeds. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
18. Constitutive Activation OsbZIP62 Improves Plant Height and Yield through Regulating the Expression of Agronomic Traits Related Genes in Rice.
- Author
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Shiqin Yang, Tao Jiang, Peilin Shen, Shengjie Ren, Zhun Gu, Fangjun Feng, Yunpeng Peng, Wei Wang, and Kai Xu
- Subjects
RICE genetics ,PLANT yields ,CROP genetics ,RNA sequencing ,TRANSCRIPTION factors - Abstract
Plant height is an important morphological trait that affects crop yield. Several genes related to plant height and yield have been reported in rice (Oryza sativa L.), however, the molecular mechanism underlying the regulation of these traits is still not completely understood. VP64 is widely used as a transcriptional activator to investigate the biological function of genes encoding transcription factors. Here, we identified a novel bZIP transcription factor OsbZIP62 that is involved in modulating agronomic traits in rice. Overexpression of OsbZIP62-VP64 (Osb-ZIP62V) significantly increases the plant height and yield per plant in rice. RNA-seq analysis showed that some plant height and panicle development related genes (i.e., OsEATB, OsDSS1 and OsGA3ox2) were up-regulated in OsbZIP62V overexpressing rice plants. Besides, OsbZIP62 could also bind to the promoters of several putative target genes. These results suggested that OsbZIP62 plays a role as transcriptional regulator in regulating the expression of genes associated with agronomic traits, and OsbZIP62 fused with VP64 would be useful in crop genetic modification with improved plant architecture and yield. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
19. Genetic diversity analysis of wheat and triticale using the transferable simple sequence repeat markers of barley
- Author
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Vahid Hosseinzadeh, Seyed Abolghasem Mohammadi, Majid Norouzi, and Behzad Sadeghzadeh
- Subjects
crop genetics ,marker-assisted breeding ,microsatellite ,ssrs ,Biotechnology ,TP248.13-248.65 ,Biology (General) ,QH301-705.5 - Abstract
Simple sequence repeat (SSR) markers are powerful tools for the determination ofrelationships between genotypes and genetic diversity because of advantages such as high polymorphism, codominance nature, multiallelism and distribution on encoding and non-encoding regions, This study investigated the transferability and polymorphism of 102 barley SSR markers in 41 bread and durum wheat and triticale genotypes. A total of 50 pair primers were transferable,and 40 pair primers producing 118 alleles(onaverage 2.95 allelesper locus) were polymorphic. The Polymorphism Information Content and genetic diversity for these markers were estimated to be 29% and 33%, respectively. The average of Shannon and Nei indices for the studied genotypes were 34% and 23%, respectively. Cluster analysis, using a Minimum Evolution algorithm and P-distance coefficient, assigned the genotypes into five groups. In principal coordinates analysis, the first principal component explained 74.69% of the total molecular variation. Analysis of molecular variance based on the genome structure of the genotypes using molecular data revealed a high level of variation within groups. In conclusion, this study has identified a set of 50 polymorphic SSR markers of barley as being useful for diversityanalysis of common wheat, durum wheat, and triticale. These microsatellites could be used for diversity analysis, molecular mapping/QTL analysis, molecular marker-assisted selection, and comparative genome analysis.
- Published
- 2020
20. Quarter century genetic progress in irrigated rice (Oryza sativa) in Southeast Brazil.
- Author
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da Costa, Weverton Gomes, da Silva Júnior, Antônio Carlos, Barbosa, Ivan de Paiva, Cruz, Cosme Damião, Borém, Aluízio, Soares, Plínio César, Gonçalves, Raphael de Paula, Torga, Paula Pereira, and Condé, Aurinelza Batista Teixeira
- Subjects
- *
RICE breeding , *GRAIN yields , *PLANTS , *RICE - Abstract
Rice is one of the most consumed cereals in the world and of extreme social and economic importance in Brazil. Minas Gerais is the leading State in irrigated rice production in the Southeast Region. This study aimed to estimate the genetic progress of 26 years of the irrigated rice breeding programme of Epamig in Southeast Brazil by time meta‐analysis. Genetic progress was estimated for grain yield, plant height and days to flowering. The dataset understood 162 genotypes in 91 trials of value for cultivation and use of 26 seasons. The rate of annual genetic gain for grain yield was estimated.99% (49.85 kg year−1). It was also verified that was a reduction in plant height and an increase in days to flowering, even if very low. Due to distinct historical phases of the rice breeding programme, there were changes in research focus and, consequently, affected the genetic gains. With this study, it was possible to evaluate the selection strategies carried out in the past and identify important points to maintain. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
21. Genetic diversity and domestication of hazelnut (Corylus avellana L.) in Turkey
- Author
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Andrew J. Helmstetter, Nihal Oztolan‐Erol, Stuart J. Lucas, and Richard J. A. Buggs
- Subjects
Corylus avellana (European hazelnut) ,crop genetics ,domestication ,gene flow ,genetic diversity ,phylogenetics ,Environmental sciences ,GE1-350 ,Botany ,QK1-989 - Abstract
Societal Impact Statement Hazelnut is consumed worldwide and is of critical economic importance to the rural communities of Turkey's northern coast. A new disease outbreak has drastically decreased yields across Turkey and climate change is emerging as a new threat to cultivation. Our study is the first to provide a genomic perspective on diversity in this vulnerable crop, which will prove valuable for future breeding efforts. Such research into perennial crops like hazelnut can help to improve farmer livelihoods and ensure the sustainability of crop production in a changing world. Summary Assessing and describing genetic diversity in crop plants is a crucial first step toward their improvement. The European hazelnut, Corylus avellana L., is one of the most economically important tree nut crops worldwide. It is primarily produced in Turkey where rural communities depend on it for their livelihoods. Despite this, we know little about its domestication history and the genetic diversity it holds. We use double digest restriction‐site associated DNA (ddRAD) sequencing to produce a genome‐wide dataset containing wild and domesticated hazelnut. We uncover patterns of population structure and diversity, determine levels of crop‐wild gene flow, and estimate the relationships among different genetic clusters. We use a dataset of over 60k single nucleotide polymorphisms to find that genetic clusters of cultivars do not reflect their given names and that there is limited evidence for a reduction in genetic diversity in domesticated individuals. We find evidence that hazelnut may have been domesticated more than once and that admixture has likely occurred multiple times between wild and domesticated hazelnut. We provide the first genomic assessment of Turkish hazelnut diversity and suggest that there has not been an extreme bottleneck during the domestication of this crop, leading to cultivars at different stages of domestication. Our study provides a platform for further research that will protect hazelnut from the threats of climate change and an emerging fungal disease.
- Published
- 2020
- Full Text
- View/download PDF
22. Selection of Stable Drought Tolerant Genotypes in Finger Millet [Eleusine coracana (L.) Gaertn] using Combination of Drought Tolerance Indices.
- Author
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ANTRE, SURESH H., RAVIKUMAR, R. L., SUBRAMANYA, A. E. SUNIL, and MEGHANA, K. J.
- Subjects
DROUGHT tolerance ,RAGI ,MILLETS ,GRAIN genetics ,CROP genetics - Abstract
Drought stress may continue to be a major limitation for the crop productivity world wide and severity may increase with the changing climate scenario. Although the finger millet is renowned for its drought tolerance, drought stress at reproductive stage dramatically affects the grain yield. A field experiment was conducted over the two years during summer 2019 and summer 2020 to identify stable drought tolerant finger millet genotypes. Three hundred and fifty genotypes representing wide genetic variability available in finger millet were evaluated for grain yield per plant under drought stress and well watered conditions by following augmented design. Significant yield reduction was observed due to drought stress in both the years. The grain yield per plant under drought stress and well watered conditions were used to determine different drought tolerance indices (DTI) viz. geometric mean productivity (GMP), mean productivity (MP), harmonic mean (HM), drought resistance index (DRI), yield index (YI), yield stability index (YSI) for each genotype and year. The combination of drought tolerance indices over the two years were used to identify the stable drought tolerant genotypes. The genotypes viz. GE-1234, GE-1286 and GE-3003 were found to be the most drought tolerant across DTI and GE-1641, GE-4719 and GE-3722 were found to be highly susceptible. The tolerant genotypes recorded less than 26 per cent yield reduction under drought stress over the two years. On the other hand, the yield reduction was more than 76 per cent over the two years in susceptible genotypes. In the present study using combination of DTI, contrasting genotypes for drought tolerance were identified and were confirmed by yield reduction under stress environment for further use. [ABSTRACT FROM AUTHOR]
- Published
- 2021
23. Mapping and Validation of Alectra vogelii Resistance in the Cowpea Landrace B301
- Author
-
Erik W. Ohlson and Michael P. Timko
- Subjects
cowpea ,Alectra vogelii ,plant parasitism ,crop genetics ,QTL mapping ,Agriculture - Abstract
Cowpea is the most important food legume in West and Central Africa and a valuable economic commodity in the region. Among the major biotic constraints to cowpea production are root parasitic weeds of which Alectra vogelii (Benth.) is of increasing importance. The cowpea landrace B301 was previously identified as a source of Alectra resistance, but neither the genes nor genomic loci conferring this resistance have been mapped. Therefore, to map and identify genetic markers linked to Alectra resistance for use in the molecular improvement of cowpea, we developed an F2 population from a cross of the susceptible variety 524B with B301. The population was phenotyped for resistance to A. vogelii and genotyped with a cowpea high density single nucleotide polymorphism (SNP) microarray. Putative resistance loci were mapped in F2 populations by categorical trait–multiple interval mapping and validated by selective genotyping. Selective genotyping indicated that the resistance loci on Vu04 (Rav1) and Vu11 (Rav2) were significantly associated with resistance (p ≤ 0.01). Using marker assisted backcrossing, the two resistance loci were introgressed independently into the susceptible 524B genetic background. Phenotyping and genotyping of the segregating backcross families delineated Rav1 to a 10 cM on chromosome 4 and Rav2 to a 6.7 cM interval in chromosome 11. These two loci are desirable for breeding Alectra resistant cowpea varieties due to their simple inheritance and ability to independently confer complete immunity to the parasite.
- Published
- 2022
- Full Text
- View/download PDF
24. Brassica rapa Domestication: Untangling Wild and Feral Forms and Convergence of Crop Morphotypes.
- Author
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McAlvay, Alex C, Ragsdale, Aaron P, Mabry, Makenzie E, Qi, Xinshuai, Bird, Kevin A, Velasco, Pablo, An, Hong, Pires, J Chris, and Emshwiller, Eve
- Subjects
CROP genetics ,PLANT genetics ,BRASSICA ,PLANT species ,GENOTYPES - Abstract
The study of domestication contributes to our knowledge of evolution and crop genetic resources. Human selection has shaped wild Brassica rapa into diverse turnip, leafy, and oilseed crops. Despite its worldwide economic importance and potential as a model for understanding diversification under domestication, insights into the number of domestication events and initial crop(s) domesticated in B. rapa have been limited due to a lack of clarity about the wild or feral status of conspecific noncrop relatives. To address this gap and reconstruct the domestication history of B. rapa , we analyzed 68,468 genotyping-by-sequencing-derived single nucleotide polymorphisms for 416 samples in the largest diversity panel of domesticated and weedy B. rapa to date. To further understand the center of origin, we modeled the potential range of wild B. rapa during the mid-Holocene. Our analyses of genetic diversity across B. rapa morphotypes suggest that noncrop samples from the Caucasus, Siberia, and Italy may be truly wild, whereas those occurring in the Americas and much of Europe are feral. Clustering, tree-based analyses, and parameterized demographic inference further indicate that turnips were likely the first crop type domesticated, from which leafy types in East Asia and Europe were selected from distinct lineages. These findings clarify the domestication history and nature of wild crop genetic resources for B. rapa , which provides the first step toward investigating cases of possible parallel selection, the domestication and feralization syndrome, and novel germplasm for Brassica crop improvement. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
25. Novel technologies for emission reduction complement conservation agriculture to achieve negative emissions from row-crop production.
- Author
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Northrup, Daniel L., Basso, Bruno, Wang, Michael Q., Morgan, Cristine L. S., and Benfey, Philip N.
- Subjects
- *
GREENHOUSE gas mitigation , *FARM management , *MICROBIAL genetics , *AGRICULTURE , *PUBLIC investments - Abstract
Plants remove carbon dioxide from the atmosphere through photosynthesis. Because agriculture's productivity is based on this process, a combination of technologies to reduce emissions and enhance soil carbon storage can allow this sector to achieve net negative emissions while maintaining high productivity. Unfortunately, current row-crop agricultural practice generates about 5% of greenhouse gas emissions in the United States and European Union. To reduce these emissions, significant effort has been focused on changing farm management practices to maximize soil carbon. In contrast, the potential to reduce emissions has largely been neglected. Through a combination of innovations in digital agriculture, crop and microbial genetics, and electrification, we estimate that a 71% (1,744 kg CO2e/ha) reduction in greenhouse gas emissions from row crop agriculture is possible within the next 15 y. Importantly, emission reduction can lower the barrier to broad adoption by proceeding through multiple stages with meaningful improvements that gradually facilitate the transition to net negative practices. Emerging voluntary and regulatory ecosystems services markets will incentivize progress along this transition pathway and guide public and private investments toward technology development. In the difficult quest for net negative emissions, all tools, including emission reduction and soil carbon storage, must be developed to allow agriculture to maintain its critical societal function of provisioning society while, at the same time, generating environmental benefits. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
26. Investigations into the Trace element variations in Wheat grains by Hand held X-ray Fluorescence.
- Author
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Joseph, Daisy
- Subjects
TRACE elements ,X-ray fluorescence ,CROP improvement ,WHEAT ,CROP genetics - Abstract
Wheat of different genotypes was analyzed for their micro and macronutrient contents using HHXRF. It was found that K and Ca was present in significant quantities and besides other trace elements Fe and Zn were present showing a positive trend for crop improvement programme. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
27. Carbon mitigation in agriculture: Pioneering technologies for a sustainable food system.
- Author
-
Thamarai, P., Deivayanai, V.C., Saravanan, A., Vickram, A.S., and Yaashikaa, P.R.
- Subjects
- *
GREENHOUSE gases , *PRECISION farming , *VERTICAL farming , *ORGANIC farming , *AGRICULTURE , *AGRICULTURAL pollution , *TECHNOLOGICAL innovations - Abstract
The agricultural sector is a significant contributor to greenhouse gas emissions, primarily through the release of carbon dioxide (CO 2), methane (CH 4), and nitrous oxide (N 2 O). These emissions are a major driver of climate change and pose a threat to global food security. This review examines the carbon footprint of agriculture, highlighting the connection between this sector and greenhouse gas emissions worldwide as well as the favourable interaction between food systems and climate change. This study investigates the causes and effects of the food chain to highlight the urgent need to develop novel agricultural methods. Precision farming, vertical farming, organic farming, and carbon-sequestering farms are a few of the innovative methods being addressed. Each has the potential to lower emissions and mitigate climate change. In the field of contemporary technologies, this review looks into improvements in crop genetics directed towards climate resilience and the use of carbon capture and utilization methods in agriculture. By increasing both sustainability and production, these advances have the potential to completely alter the agricultural environment. To build a sustainable food system that reduces carbon emissions and combats climate change while maintaining the food security of future generations, we emphasize the urgency of implementing these innovative technologies and practices. [Display omitted] • Sources and impacts of carbon emissions in agricultural field were provided. • Innovative farming practices such as organic farming and precision farming were focussed. • The importance of recent technological advancements in agriculture has been discussed. • Future perspectives on sustainability approaches were reviewed. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
28. Farmers' Perception about the Use of Sorghum (Sorghum bicolor (L.) Moench) Landraces and Their Genetic Erosion in South Wollo Administrative Zone, Ethiopia.
- Author
-
Birhanu Abegaz, Silamlak and Hailu Tessema, Faris
- Subjects
- *
SORGHUM , *GERMPLASM conservation , *CROP genetics , *TRADITIONAL knowledge , *FARMERS , *FOCUS groups - Abstract
Genetic erosion can result in the loss of sorghum landrace genetic diversity. In the study areas, although it is generally believed that genetic erosion had occurred, there are no data on its amount and extent. Thus, this study is aimed to assess farmers' perception about the use of sorghum landraces and their genetic erosion and to identify suggested reasons for the replacement of sorghum landraces. To this end, a field survey of 1200 farmers, randomly selected over the three districts (Tenta, Mekdela, and Delanta) during 2006 to 2015/2016 main cropping seasons, was undertaken. Structured questionnaire survey of households, focused group discussions, key informant interviews, and field observations were used to collect data. Moreover, the data for samples collected during 1980 were obtained from the Ethiopian Biodiversity Institute (EBI). Sorghum landrace history profile analysis indicated that there was an insight in the use of local varieties among local farmers over the past three or above decades. However, there is a reduction trend due to the different selection criteria described by farmers. "Kokita," "Merar," "Marchuke," "Tinkish" (except for "Necho-Tinkish" and "Jofa-Tinkish"), and "Fesho" were totally excluded (lost) by local farmers attributed by home consumption preferences. The interviewed farmers indicated that genetic erosion had occurred. Genetic erosion of 100% was observed in white sorghum in Mekdela and 66.7% in Delanta and Tenta districts. Likewise, genetic erosion of red sorghum, 25%, 20%, and 75%, respectively, was detected in Tenta, Mekdela, and Delanta. For yellow sorghum grains, genetic erosion was 33.4% in Tenta and 66.7% in Mekdela and Delanta. Genetic erosion for "Tinkish" was found to be 66.7% in Tenta and 50% in Mekdela and Delanta. Based on farmer responses, genetic erosion was attributed to reduced benefits from landraces, drought, climate change, market price and demand, and reduction in land size. The actions of both natural and conscious selection on farm were also discussed in detail as genetic erosion scenarios. Therefore, attention should be given to conservation of farmers' varieties in which involving farmers' participation is very important in order to use their indigenous knowledge for conservation of FVs and on-farm conservation strategies should be practiced for FV sustainable use. Thus, genetic resource conservation is attained. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
29. Incorporating realistic trait physiology into crop growth models to support genetic improvement.
- Author
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Boote, K. J., Jones, J. W., and Hoogenboom, G.
- Subjects
- *
CROP growth , *CROP physiology , *CROP genetics , *CROP improvement , *CLIMATE change - Published
- 2021
- Full Text
- View/download PDF
30. A roadmap for gene functional characterisation in crops with large genomes: Lessons from polyploid wheat
- Author
-
Nikolai M Adamski, Philippa Borrill, Jemima Brinton, Sophie A Harrington, Clémence Marchal, Alison R Bentley, William D Bovill, Luigi Cattivelli, James Cockram, Bruno Contreras-Moreira, Brett Ford, Sreya Ghosh, Wendy Harwood, Keywan Hassani-Pak, Sadiye Hayta, Lee T Hickey, Kostya Kanyuka, Julie King, Marco Maccaferrri, Guy Naamati, Curtis J Pozniak, Ricardo H Ramirez-Gonzalez, Carolina Sansaloni, Ben Trevaskis, Luzie U Wingen, Brande BH Wulff, and Cristobal Uauy
- Subjects
crop genetics ,genomics ,wheat ,polyploidy ,Medicine ,Science ,Biology (General) ,QH301-705.5 - Abstract
Understanding the function of genes within staple crops will accelerate crop improvement by allowing targeted breeding approaches. Despite their importance, a lack of genomic information and resources has hindered the functional characterisation of genes in major crops. The recent release of high-quality reference sequences for these crops underpins a suite of genetic and genomic resources that support basic research and breeding. For wheat, these include gene model annotations, expression atlases and gene networks that provide information about putative function. Sequenced mutant populations, improved transformation protocols and structured natural populations provide rapid methods to study gene function directly. We highlight a case study exemplifying how to integrate these resources. This review provides a helpful guide for plant scientists, especially those expanding into crop research, to capitalise on the discoveries made in Arabidopsis and other plants. This will accelerate the improvement of crops of vital importance for food and nutrition security.
- Published
- 2020
- Full Text
- View/download PDF
31. Genetic diversity and domestication of hazelnut (Corylus avellana L.) in Turkey.
- Author
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Helmstetter, Andrew J., Oztolan‐Erol, Nihal, Lucas, Stuart J., and Buggs, Richard J. A.
- Subjects
- *
HAZELNUTS , *CLIMATE change , *AGRICULTURAL productivity , *CROP yields , *SINGLE nucleotide polymorphisms - Abstract
Societal Impact Statement: Hazelnut is consumed worldwide and is of critical economic importance to the rural communities of Turkey's northern coast. A new disease outbreak has drastically decreased yields across Turkey and climate change is emerging as a new threat to cultivation. Our study is the first to provide a genomic perspective on diversity in this vulnerable crop, which will prove valuable for future breeding efforts. Such research into perennial crops like hazelnut can help to improve farmer livelihoods and ensure the sustainability of crop production in a changing world. SummaryAssessing and describing genetic diversity in crop plants is a crucial first step toward their improvement. The European hazelnut, Corylus avellana L., is one of the most economically important tree nut crops worldwide. It is primarily produced in Turkey where rural communities depend on it for their livelihoods. Despite this, we know little about its domestication history and the genetic diversity it holds.We use double digest restriction‐site associated DNA (ddRAD) sequencing to produce a genome‐wide dataset containing wild and domesticated hazelnut. We uncover patterns of population structure and diversity, determine levels of crop‐wild gene flow, and estimate the relationships among different genetic clusters.We use a dataset of over 60k single nucleotide polymorphisms to find that genetic clusters of cultivars do not reflect their given names and that there is limited evidence for a reduction in genetic diversity in domesticated individuals. We find evidence that hazelnut may have been domesticated more than once and that admixture has likely occurred multiple times between wild and domesticated hazelnut.We provide the first genomic assessment of Turkish hazelnut diversity and suggest that there has not been an extreme bottleneck during the domestication of this crop, leading to cultivars at different stages of domestication. Our study provides a platform for further research that will protect hazelnut from the threats of climate change and an emerging fungal disease. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
32. Genetic diversity analysis of wheat and triticale using transferable simple sequence repeat markers of barley.
- Author
-
Hosseinzadeh, Vahid, Mohammadi, Seyed Abolghasem, Norouzi, Majid, and Sadeghzadeh, Behzad
- Subjects
- *
WHEAT , *TRITICALE , *BARLEY - Abstract
Simple sequence repeat (SSR) markers are powerful tools for the determination of relationships between genotypes and genetic diversity because of advantages such as high polymorphism, codominance nature, multiallelism and distribution on encoding and non-encoding regions, This study investigated the transferability and polymorphism of 102 barley SSR markers in 41 bread and durum wheat and triticale genotypes. A total of 50 pair primers were transferable, and 40 pair primers producing 118 alleles (on average 2.95 alleles per locus) were polymorphic. The Polymorphism Information Content and genetic diversity for these markers were estimated to be 29% and 33%, respectively. The average of Shannon and Nei indices for the studied genotypes were 34% and 23%, respectively. Cluster analysis, using a Minimum Evolution algorithm and P-distance coefficient, assigned the genotypes into five groups. In principal coordinates analysis, the first principal component explained 74.69% of the total molecular variation. Analysis of molecular variance based on the genome structure of the genotypes using molecular data revealed a high level of variation within groups. In conclusion, this study has identified a set of 50 polymorphic SSR markers of barley as being useful for diversity analysis of common wheat, durum wheat, and triticale. These microsatellites could be used for diversity analysis, molecular mapping/QTL analysis, molecular marker-assisted selection, and comparative genome analysis. [ABSTRACT FROM AUTHOR]
- Published
- 2020
33. Crop genetics research in Asia: improving food security and nutrition.
- Author
-
Zhang, Qifa, Xu, Mingliang, Xia, Xianchun, Komatsuda, Takao, Varshney, Rajeev K., and Shi, Kai
- Subjects
- *
EPIGENOMICS , *CROP genetics , *NUTRITION , *LEGUMES , *PLANT breeding , *BOTANY , *FOOD security , *FRUIT ripening - Published
- 2020
- Full Text
- View/download PDF
34. Pulse Crop Genetics for a Sustainable Future: Where We Are Now and Where We Should Be Heading.
- Author
-
Sahruzaini, Nurul Amylia, Rejab, Nur Ardiyana, Harikrishna, Jennifer Ann, Khairul Ikram, Nur Kusaira, Ismail, Ismanizan, Kugan, Hazel Marie, and Cheng, Acga
- Subjects
CROP genetics ,LEGUMES ,NITROGEN fixation ,FOOD crops ,HUMAN ecology ,FOOD security ,SOYBEAN - Abstract
The last decade has witnessed dramatic changes in global food consumption patterns mainly because of population growth and economic development. Food substitutions for healthier eating, such as swapping regular servings of meat for protein-rich crops, is an emerging diet trend that may shape the future of food systems and the environment worldwide. To meet the erratic consumer demand in a rapidly changing world where resources become increasingly scarce due largely to anthropogenic activity, the need to develop crops that benefit both human health and the environment has become urgent. Legumes are often considered to be affordable plant-based sources of dietary proteins. Growing legumes provides significant benefits to cropping systems and the environment because of their natural ability to perform symbiotic nitrogen fixation, which enhances both soil fertility and water-use efficiency. In recent years, the focus in legume research has seen a transition from merely improving economically important species such as soybeans to increasingly turning attention to some promising underutilized species whose genetic resources hold the potential to address global challenges such as food security and climate change. Pulse crops have gained in popularity as an affordable source of food or feed; in fact, the United Nations designated 2016 as the International Year of Pulses, proclaiming their critical role in enhancing global food security. Given that many studies have been conducted on numerous underutilized pulse crops across the world, we provide a systematic review of the related literature to identify gaps and opportunities in pulse crop genetics research. We then discuss plausible strategies for developing and using pulse crops to strengthen food and nutrition security in the face of climate and anthropogenic changes. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
35. Application stages and nitrogen sources in topdressing of super-early bean crop irrigated.
- Author
-
da SILVA JÚNIOR, Jair Leão, Pereira BRAZ, Antonio Joaquim Braga, BOLDRIN, Paulo Fernandes, FERREIRA, Camila Jorge Bernabé, and da SILVEIRA, Pedro Marques
- Subjects
BEAN genetics ,CROP genetics ,NITROGEN fertilizers ,NITROGEN in agriculture ,IRRIGATION farming ,AGROHYDROLOGY ,COMMON bean varieties ,CHLOROPHYLL - Abstract
Copyright of Cientifica is the property of Fundacao de Apoio a Pesquisa e Extensao and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2020
- Full Text
- View/download PDF
36. A critical look on CRISPR‐based genome editing in plants.
- Author
-
Ahmad, Niaz, Rahman, Mehboob‐ur, Mukhtar, Zahid, Zafar, Yusuf, and Zhang, Baohong
- Subjects
- *
GENOME editing , *GENE expression , *CROP genetics , *PLANT species , *GENETIC engineering , *PHENOTYPES - Abstract
Clustered regularly interspaced short palindromic repeats (CRISPR)‐based genome editing, derived from prokaryotic immunity system, is rapidly emerging as an alternative platform for introducing targeted alterations in genomes. The CRISPR‐based tools have been deployed for several other applications including gene expression studies, detection of mutation patterns in genomes, epigenetic regulation, chromatin imaging, etc. Unlike the traditional genetic engineering approaches, it is simple, cost‐effective, and highly specific in inducing genetic variations. Despite its popularity, the technology has limitations such as off‐targets, low mutagenesis efficiency, and its dependency on in‐vitro regeneration protocols for the recovery of stable plant lines. Several other issues such as persisted CRISPR activity in subsequent generations, the potential for transferring to its wild type population, the risk of reversion of edited version to its original phenotype particularly in cross‐pollinated plant species when released into the environment and the scarcity of validated targets have been overlooked. This article briefly highlights these undermined aspects, which may challenge the wider applications of this platform for improving crop genetics. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
37. Development and characterization of an EMS-mutagenized wheat population and identification of salt-tolerant wheat lines.
- Author
-
Lethin, Johanna, Shakil, Shahriar S. M., Hassan, Sameer, Sirijovski, Nick, Töpel, Mats, Olsson, Olof, and Aronsson, Henrik
- Subjects
- *
SOIL salinity , *COMPARATIVE genomics , *POPULATION , *WHEAT , *ETHYL methanesulfonate , *SALT-tolerant crops , *CROP genetics - Abstract
Background: Triticum aestivum (wheat) is one of the world's oldest crops and has been used for >8000 years as a food crop in North Africa, West Asia and Europe. Today, wheat is one of the most important sources of grain for humans, and is cultivated on greater areas of land than any other crop. As the human population increases and soil salinity becomes more prevalent, there is increased pressure on wheat breeders to develop salt-tolerant varieties in order to meet growing demands for yield and grain quality. Here we developed a mutant wheat population using the moderately salt-tolerant Bangladeshi variety BARI Gom-25, with the primary goal of further increasing salt tolerance. Results: After titrating the optimal ethyl methanesulfonate (EMS) concentration, ca 30,000 seeds were treated with 1% EMS, and 1676 lines, all originating from single seeds, survived through the first four generations. Most mutagenized lines showed a similar phenotype to BARI Gom-25, although visual differences such as dwarfing, giant plants, early and late flowering and altered leaf morphology were seen in some lines. By developing an assay for salt tolerance, and by screening the mutagenized population, we identified 70 lines exhibiting increased salt tolerance. The selected lines typically showed a 70% germination rate on filter paper soaked in 200 mM NaCl, compared to 0–30% for BARI Gom-25. From two of the salt-tolerant OlsAro lines (OA42 and OA70), genomic DNA was sequenced to 15x times coverage. A comparative analysis against the BARI Gom-25 genomic sequence identified a total of 683,201 (OA42), and 768,954 (OA70) SNPs distributed throughout the three sub-genomes (A, B and D). The mutation frequency was determined to be approximately one per 20,000 bp. All the 70 selected salt-tolerant lines were tested for root growth in the laboratory, and under saline field conditions in Bangladesh. The results showed that all the lines selected for tolerance showed a better salt tolerance phenotype than both BARI Gom-25 and other local wheat varieties tested. Conclusion: The mutant wheat population developed here will be a valuable resource in the development of novel salt-tolerant varieties for the benefit of saline farming. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
38. Comparison of the Agricultural Characteristics of Bread Wheat (Triticum aestivum L.) Genotypes based on Irrigated Conditions in Different Locations.
- Author
-
KARAMAN, Mehmet and AKTAS, Hüsnü
- Subjects
WHEAT breeding ,WHEAT irrigation ,WHEAT seeds ,PLANT breeding ,CROP genetics ,GENOTYPES - Abstract
This study was performed under irrigated condition of Diyarbakir and Sanliurfa provinces, Turkey in the 2013-2014 production season to determine superior wheat genotypes for irrigated or high rainfall areas and contribute breeding programs. Experiments was designed according to the random blocks trial pattern with four replications. Performance of genotypes for examined traits was found statically different at level of p≤ 0.01. According to ranking biplot analyse G9 was the most stable genotype for grain yield and G11 for seed protein content. Advansed lines, G9, G11 and G17 were determined as supeior genotypes for grain yield and quality traits compare to cultivars that used as a national checks. These advanced lines could be used as genitor in breeding programs to improve high quality and yielding varieties for irrigated conditions. [ABSTRACT FROM AUTHOR]
- Published
- 2020
39. Seed Banking as Cryopower: A Cryopolitical Account of the Work of the International Board of Plant Genetic Resources, 1973–1984.
- Author
-
Peres, Sara
- Subjects
- *
PLANT germplasm , *PLANT germplasm -- Cryopreservation , *SEEDS , *CROP genetics ,PLANT germplasm storage - Abstract
The implications of freezing seeds to conserve genes statically and for the long term are complex and deserve further reflection to appreciate seed banking as an attempt to detach seeds from their life cycle. Here, I use a cryopolitical framework to explore this in the context of the activities of the International Board of Plant Genetic Resources (IBPGR) between 1973 and 1984. I suggest that the emergence of seed banks is a shift toward a cryopower mode of governance, where technoscientific intervention in the biology of seeds was presented as a means to manage the survival of seeds. The project of ex situ conservation is a socio‐technical effort by international institutions such as IBPGR and a variety of institutions with seed repositories. In creating a coldscape, they sought to make genetic resources into frozen seeds that were stable and mobile, not only across space but, importantly, over time. Consequently, our interpretations of seed banks as sites of geopolitical significance in the controversies over access to seeds can be complemented by considering their biopolitical importance as interventions that extend the power of IBPGR and other institutions toward plant life, and the future. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
40. Agrobacterium-mediated genetic modification of Bramley's seedling apple
- Author
-
McAdam-O'Connell, Darren John Patrick
- Subjects
664 ,Crop genetics - Published
- 2002
41. The role of Rop GTPases in root-hair development in Arabidopsis thaliana
- Author
-
Jones, Mark Alan
- Subjects
581 ,Crop genetics - Published
- 2002
42. Genetic manipulation of seed storage protein and carbohydrate metabolism in barley (Hordeum vulgare L.)
- Author
-
Zhang, Yuhua
- Subjects
610.28 ,Crop genetics - Published
- 2001
43. Tissue culture and genetic manipulation of Thai rice
- Author
-
Kermanee, Prasart
- Subjects
610.28 ,Crop genetics - Published
- 2001
44. Changes in the yield limiting processes associated with the genetic improvement of wheat
- Author
-
Shearman, Victoria Jane
- Subjects
630 ,Crop genetics - Published
- 2001
45. Studies into tomato genotypes deficient in the ABA biosynthetic enzymes zeaxanthin epoxidase and 9-cis-epoxycarontenoid dioxygenase
- Author
-
Parker, Rachel Anne
- Subjects
610.28 ,Crop genetics - Published
- 2001
46. Triticeae genome relationships and wheat flowering time genes
- Author
-
Zhang, Hui
- Subjects
610.28 ,Crop genetics - Published
- 2001
47. Manipulation of the isoprenoid pathway in tomato (lycopersicon esculentum) by over expression of HMGR (3-hydroxy-3-methylglutaryl coenzyme-A reductase)
- Author
-
Enfissi, Eugenia Maria Antonia
- Subjects
572.8 ,Crop genetics - Published
- 2001
48. Towards low tare sugarbeet
- Author
-
Baldridge, Mark
- Subjects
610.28 ,Crop genetics - Published
- 2000
49. MYB transcription factors and the control of secondary metabolism in tomato
- Author
-
Holford, Rachel
- Subjects
610.28 ,Crop genetics - Published
- 1999
50. Studies on the expression of dormancy-related genes in barley (Hordeum vulgare L.)
- Author
-
Ranford, Julia Claire
- Subjects
610.28 ,Crop genetics - Published
- 1999
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