11,206 results on '"Cockburn, A."'
Search Results
2. Caregiver Experience with Bicultural, Bilingual Family Navigators to Support Early Childhood Development
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Grant, Abigail R., Cockburn, Brenna, Ahmed, Farhiyo, Dumanian, Rachel, Garcia, Yesenia, Gould, Jon, Martinez-Novoa, Fernanda, McFarland, Madeline, and Dawson-Hahn, Elizabeth
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- 2024
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3. Symmetry Parameters of Two-Generator Circulant Graphs
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Cockburn, Sally and Loeb, Sarah
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- 2024
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4. Education and Equity: A Case Study of Educators at a Specialized Charter School
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Brandon Thomas Cockburn
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The commitment to Inclusion, Diversity, Equity, and Access (IDEA) has come at a precarious time, which finds education and schooling under attack by hate-filled and dehumanizing rhetoric. The current socio-political climate situates education and teachers as a public enemy, and an onslaught of anti-equity education bills in legislatures have been passed in the past few years. While there has been an overwhelming commitment to IDEA in many spaces, even places meant to serve all people, such as the institution of schools, have moved away from these initiatives. In this work, I will utilize a case study methodology to examine how teachers center IDEA in their work. I am looking at a specialized charter school in a southwest metropolitan area that supports students impacted by substance use disorders. The school was founded and centered on supporting all students with a lens of equity and has grown since its founding in the late 2010s. Utilizing a critical framework of queer theories, I will learn from and with the co-conspirators about their equitable pedagogy and praxis. By utilizing an amalgam of qualitative methods, such as interviews, texts, artifacts, and discussions, I look to engage in a deeper, critical view of their work. Engaging in these methods with critical discourse analysis will allow for a more significant look at the way in which power and language shape our understanding of these issues in educational spaces. With this hope, we can create and instill equitable practices for other schools to implement other programming using the same framework within IDEA. [The dissertation citations contained here are published with the permission of ProQuest LLC. Further reproduction is prohibited without permission. Copies of dissertations may be obtained by Telephone (800) 1-800-521-0600. Web page: http://www.proquest.com/en-US/products/dissertations/individuals.shtml.]
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- 2024
5. How Might I Change the World? Enriching Social Impact and Career Aspirations with a Global Experiential Instructional Innovation
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Christine H. Mooney and Bethany S. Cockburn
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This article outlines a novel approach for career readiness which embeds a global engagement trip within a social entrepreneurship course. Utilizing an empathy driven approach, the instructional innovation exposes students to social impact and innovation in an entrepreneurial setting, provides an opportunity for rich engagements with social and micro-entrepreneurs, and facilitates connection with self and others. Reflexive assignments and dialogues are integrated throughout the instructional innovation allowing students to identify and reflect on their aspirations and intentions for creating societal impact in their career journeys. Participation in this experience has resulted in outcomes related to career goals, including new plans for building social impact into work and renewed social entrepreneurial intentions. Instructions, exercises, and evidence of their effectiveness are provided.
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- 2024
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6. Fluorine labelling for in situ 19F NMR in oriented systems
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Cockburn, Kieran T. and Sykes, Brian D.
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- 2024
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7. Impact of commissural versus coronary alignment on risk of coronary obstruction following transcatheter aortic valve implantation
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Pavitt, Christopher, Arunothayaraj, Sandeep, Broyd, Christopher, Michail, Michael, Cockburn, James, and Hildick-Smith, David
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- 2024
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8. Solar ultraviolet radiation exposure, and incidence of childhood acute lymphocytic leukaemia and non-Hodgkin lymphoma in a US population-based dataset
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Little, Mark P., Mai, Jim Z., Fang, Michelle, Chernyavskiy, Pavel, Kennerley, Victoria, Cahoon, Elizabeth K., Cockburn, Myles G., Kendall, Gerald M., and Kimlin, Michael G.
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- 2024
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9. Trends in the Prevalence of Autism Spectrum Disorder in California: Disparities by Sociodemographic Factors and Region Between 1990–2018
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O’Sharkey, Karl, Mitra, Sanjali, Paik, Seung-a, Chow, Ting, Cockburn, Myles, and Ritz, Beate
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- 2024
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10. Mural Painting and Inclusive Research in Cameroon: Implementation and Impact at the University of Bamenda Campus
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Paul Ngong Animbom, Lynn Cockburn, Tele Djosseu Ghislain Landry, Tafor K Ateh, and Louis Mbibeh
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murals ,knowledge mobilization ,mural painting ,visual expression ,inclusive research ,students with disabilities ,university milieu ,Visual arts ,N1-9211 ,Special aspects of education ,LC8-6691 - Abstract
This paper describes the use of mural-making as part of the knowledge mobilization activities of an international research partnership project. The mural depicts the technical and academic activities of people with disabilities in a university setting as meaningful action in inclusive research processes. The main objective of this 30-meter mural painting on a wall in the University of Bamenda was to demonstrate that inclusive research could encourage the inclusion and participation of people with disabilities in all areas of academic and professional activities of the university. A mural-making protocol was developed by the faculty and implemented by the team. It included the collection, analysis, and understanding of data on inclusion; design of drawings and the mural; wall preparation; plotting; and execution of the actual mural. The brightly colored mural now draws attention to inclusion, provides a vision of hopefulness, and complements the narrative character of inclusive education and research on campus.
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- 2024
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11. Consistency, completeness and external validity of ethnicity recording in NHS primary care records: a cohort study in 25 million patients’ records at source using OpenSAFELY
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The OpenSAFELY Collaborative, Colm D. Andrews, Rohini Mathur, Jon Massey, Robin Park, Helen J. Curtis, Lisa Hopcroft, Amir Mehrkar, Seb Bacon, George Hickman, Rebecca Smith, David Evans, Tom Ward, Simon Davy, Peter Inglesby, Iain Dillingham, Steven Maude, Thomas O’Dwyer, Ben F. C. Butler-Cole, Lucy Bridges, Chris Bates, John Parry, Frank Hester, Sam Harper, Jonathan Cockburn, Ben Goldacre, Brian MacKenna, Laurie A. Tomlinson, Alex J. Walker, and William J. Hulme
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Primary care health sciences ,Electronic health records ,Ethnicity ,Data curation ,Medicine - Abstract
Abstract Background Ethnicity is known to be an important correlate of health outcomes, particularly during the COVID-19 pandemic, where some ethnic groups were shown to be at higher risk of infection and adverse outcomes. The recording of patients’ ethnic groups in primary care can support research and efforts to achieve equity in service provision and outcomes; however, the coding of ethnicity is known to present complex challenges. We therefore set out to describe ethnicity coding in detail with a view to supporting the use of this data in a wide range of settings, as part of wider efforts to robustly describe and define methods of using administrative data. Methods We describe the completeness and consistency of primary care ethnicity recording in the OpenSAFELY-TPP database, containing linked primary care and hospital records in > 25 million patients in England. We also compared the ethnic breakdown in OpenSAFELY-TPP with that of the 2021 UK census. Results 78.2% of patients registered in OpenSAFELY-TPP on 1 January 2022 had their ethnicity recorded in primary care records, rising to 92.5% when supplemented with hospital data. The completeness of ethnicity recording was higher for women than for men. The rate of primary care ethnicity recording ranged from 77% in the South East of England to 82.2% in the West Midlands. Ethnicity recording rates were higher in patients with chronic or other serious health conditions. For each of the five broad ethnicity groups, primary care recorded ethnicity was within 2.9 percentage points of the population rate as recorded in the 2021 Census for England as a whole. For patients with multiple ethnicity records, 98.7% of the latest recorded ethnicities matched the most frequently coded ethnicity. Patients whose latest recorded ethnicity was categorised as Other were most likely to have a discordant ethnicity recording (32.2%). Conclusions Primary care ethnicity data in OpenSAFELY is present for over three quarters of all patients, and combined with data from other sources can achieve a high level of completeness. The overall distribution of ethnicities across all English OpenSAFELY-TPP practices was similar to the 2021 Census, with some regional variation. This report identifies the best available codelist for use in OpenSAFELY and similar electronic health record data.
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- 2024
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12. Automating incidence and prevalence analysis in open cohorts
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Neil Cockburn, Ben Hammond, Illin Gani, Samuel Cusworth, Aditya Acharya, Krishna Gokhale, Rasiah Thayakaran, Francesca Crowe, Sonica Minhas, William Parry Smith, Beck Taylor, Krishnarajah Nirantharakumar, and Joht Singh Chandan
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Medicine (General) ,R5-920 - Abstract
Abstract Motivation Data is increasingly used for improvement and research in public health, especially administrative data such as that collected in electronic health records. Patients enter and exit these typically open-cohort datasets non-uniformly; this can render simple questions about incidence and prevalence time-consuming and with unnecessary variation between analyses. We therefore developed methods to automate analysis of incidence and prevalence in open cohort datasets, to improve transparency, productivity and reproducibility of analyses. Implementation We provide both a code-free set of rules for incidence and prevalence that can be applied to any open cohort, and a python Command Line Interface implementation of these rules requiring python 3.9 or later. General features The Command Line Interface is used to calculate incidence and point prevalence time series from open cohort data. The ruleset can be used in developing other implementations or can be rearranged to form other analytical questions such as period prevalence. Availability The command line interface is freely available from https://github.com/THINKINGGroup/analogy_publication .
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- 2024
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13. Strengthening the response to elder financial abuse and the proposed enduring power of attorney register: Suggested first steps
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Purser, Kelly, Lewis, Bridget, Cockburn, Tina, and Christensen, Sharon
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- 2023
14. Digital Transformation: Strategy, Execution, and Technology
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Cockburn, Tom
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- 2024
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15. Consistency, completeness and external validity of ethnicity recording in NHS primary care records: a cohort study in 25 million patients’ records at source using OpenSAFELY
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Andrews, Colm D., Mathur, Rohini, Massey, Jon, Park, Robin, Curtis, Helen J., Hopcroft, Lisa, Mehrkar, Amir, Bacon, Seb, Hickman, George, Smith, Rebecca, Evans, David, Ward, Tom, Davy, Simon, Inglesby, Peter, Dillingham, Iain, Maude, Steven, O’Dwyer, Thomas, Butler-Cole, Ben F. C., Bridges, Lucy, Bates, Chris, Parry, John, Hester, Frank, Harper, Sam, Cockburn, Jonathan, Goldacre, Ben, MacKenna, Brian, Tomlinson, Laurie A., Walker, Alex J., and Hulme, William J.
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- 2024
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16. Automating incidence and prevalence analysis in open cohorts
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Cockburn, Neil, Hammond, Ben, Gani, Illin, Cusworth, Samuel, Acharya, Aditya, Gokhale, Krishna, Thayakaran, Rasiah, Crowe, Francesca, Minhas, Sonica, Smith, William Parry, Taylor, Beck, Nirantharakumar, Krishnarajah, and Chandan, Joht Singh
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- 2024
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17. Heterogeneity in strategy use during arbitration between experiential and observational learning
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Charpentier, Caroline J., Wu, Qianying, Min, Seokyoung, Ding, Weilun, Cockburn, Jeffrey, and O’Doherty, John P.
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- 2024
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18. Ambient long-term exposure to organophosphorus pesticides and the human gut microbiome: an observational study
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Zhang, Keren, Paul, Kimberly, Jacobs, Jonathan P., Cockburn, Myles G., Bronstein, Jeff M., del Rosario, Irish, and Ritz, Beate
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- 2024
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19. Temporally organized representations of reward and risk in the human brain
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Man, Vincent, Cockburn, Jeffrey, Flouty, Oliver, Gander, Phillip E., Sawada, Masahiro, Kovach, Christopher K., Kawasaki, Hiroto, Oya, Hiroyuki, Howard III, Matthew A., and O’Doherty, John P.
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- 2024
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20. Heterogeneity in strategy use during arbitration between experiential and observational learning
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Caroline J. Charpentier, Qianying Wu, Seokyoung Min, Weilun Ding, Jeffrey Cockburn, and John P. O’Doherty
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Science - Abstract
Abstract To navigate our complex social world, it is crucial to deploy multiple learning strategies, such as learning from directly experiencing action outcomes or from observing other people’s behavior. Despite the prevalence of experiential and observational learning in humans and other social animals, it remains unclear how people favor one strategy over the other depending on the environment, and how individuals vary in their strategy use. Here, we describe an arbitration mechanism in which the prediction errors associated with each learning strategy influence their weight over behavior. We designed an online behavioral task to test our computational model, and found that while a substantial proportion of participants relied on the proposed arbitration mechanism, there was some meaningful heterogeneity in how people solved this task. Four other groups were identified: those who used a fixed mixture between the two strategies, those who relied on a single strategy and non-learners with irrelevant strategies. Furthermore, groups were found to differ on key behavioral signatures, and on transdiagnostic symptom dimensions, in particular autism traits and anxiety. Together, these results demonstrate how large heterogeneous datasets and computational methods can be leveraged to better characterize individual differences.
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- 2024
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21. Exploring the Novel Alternative and Modern Treatment Options for Polycystic Ovary Syndrome-A Review
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Stephanie Mohammed, Brian N. Cockburn, and Venkatesan Sundaram
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polycystic ovary syndrome ,PCOS ,noninvasive treatment ,novel treatment options ,lifestyle changes ,pharmacologic agents ,Other systems of medicine ,RZ201-999 - Abstract
Introduction: Polycystic ovary syndrome (PCOS) is a widespread endocrine disorder that affects millions of women globally. The conventional approach to managing PCOS involves dietary adjustments, lifestyle modifications, pharmacological interventions, and in some cases, surgical procedures. This comprehensive review is dedicated to exploring novel treatment options for PCOS, with a specific focus on physical modalities, herbal approaches, holistic therapies, medical procedures, bacteriotherapeutics, and supplements. Method: To conduct this review, a systematic literature search was carried out up to 2023, utilizing reputable databases such as PubMed, Embase, Google Scholar, and the Cochrane Library. The search identified 33 key articles meeting the inclusion criteria, which encompassed both animal and human studies concentrating on PCOS and innovative interventions. The primary emphasis during the evaluation was on efficacy and safety. The articles were organized into six distinct groups: holistic therapies, herbal and natural approaches, physical modalities, medical procedures, bacteriotherapeutics, and supplements. Quality assessment involved the use of the Cochrane risk-of-bias tool and Assessment of Multiple Systematic Reviews (AMSTAR) 2. Results: The review unveiled a spectrum of interventions, ranging from acupuncture, yoga, and herbal remedies to high-intensity ultrasound, ultrasound cavitation, probiotics, fecal microbiota transplantation, and supplements. While some interventions exhibited promising results, conflicting reports and uncertainties persisted. Notably, positive effects on insulin resistance and androgen levels were observed with supplements. The intricate nature of PCOS treatments underscores the need for evidence-based strategies. Conclusion: While noninvasive and natural treatments show promise in the management of PCOS, rigorous research is indispensable to evaluate their long-term safety and optimal clinical utilization. The integration of lifestyle changes, conventional therapies and novel treatments, presents a potential avenue for a comprehensive and effective approach to treating PCOS, offering hope to millions of affected women worldwide. Caution is advised in the emerging realm of alternative treatments, and consulting health care professionals for informed decision-making in PCOS management continues to be strongly recommended.
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- 2024
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22. The Significance of Thyroid Hormone Receptors in Breast Cancer: A Hypothesis-Generating Narrative Review
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Trinity Quan, Jessica Cockburn, Sukhbinder Dhesy-Thind, Anita Bane, Hon Leong, Christopher Geleff, Catherine Devion, Noor Ajel, and Katarzyna J. Jerzak
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thyroid receptor beta ,breast cancer ,biomarker ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Background: Breast cancer (BC) is frequently diagnosed among Canadian women. While targeted therapies are available for most BC patients; treatment resistance is common and novel therapeutic targets are of interest. Thyroid hormones (TH) bound to thyroid hormone receptors (THR) influence cell proliferation and differentiation; they are also involved in the growth and development of normal breast tissue. Evidence suggests that THRβ is a tumor suppressor in various solid tumors. Purpose: This narrative review discusses retrospective studies regarding the clinical relevance of THRβ as a potential prognostic biomarker and therapeutic target in BC. Methods: We consulted with an information specialist to develop a search strategy to find all literature related to THRα expression as a potential prognostic and therapeutic biomarker in breast cancer. The primary search was developed for Medline and translated to Embase. The searches were conducted on the Ovid platform on 18 August 2023. Results: Across seven retrospective studies identified, several have shown an association between higher THRβ1 expression with a lower risk of BC recurrence and with longer overall survival. Conclusions: Some evidence suggests that THRβ expression is associated with a lower risk of BC recurrence and death. Validation of THRβ as an independent prognostic biomarker and possible predictive biomarker of response to endocrine therapy and/or chemotherapy is of interest. Given that THRβ is upstream of the AKT/PI3K pathway, its potential as a predictive biomarker of response to AKT inhibitors and/or PI3K inhibitors may also be of value. Finally, the potential re-purposing of THRβ agonists as anti-cancer agents warrants investigation.
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- 2024
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23. Ambient long-term exposure to organophosphorus pesticides and the human gut microbiome: an observational study
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Keren Zhang, Kimberly Paul, Jonathan P. Jacobs, Myles G. Cockburn, Jeff M. Bronstein, Irish del Rosario, and Beate Ritz
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Organophosphorus pesticides ,Gut microbiome ,Predicted metagenome ,Geographic information system ,Industrial medicine. Industrial hygiene ,RC963-969 ,Public aspects of medicine ,RA1-1270 - Abstract
Abstract Background Organophosphorus pesticides (OP) have been associated with various human health conditions. Animal experiments and in-vitro models suggested that OP may also affect the gut microbiota. We examined associations between ambient chronic exposure to OP and gut microbial changes in humans. Methods We recruited 190 participants from a community-based epidemiologic study of Parkinson’s disease living in a region known for heavy agricultural pesticide use in California. Of these, 61% of participants had Parkinson’s disease and their mean age was 72 years. Microbiome and predicted metagenome data were generated by 16S rRNA gene sequencing of fecal samples. Ambient long-term OP exposures were assessed using pesticide application records combined with residential addresses in a geographic information system. We examined gut microbiome differences due to OP exposures, specifically differences in microbial diversity based on the Shannon index and Bray–Curtis dissimilarities, and differential taxa abundance and predicted Metacyc pathway expression relying on regression models and adjusting for potential confounders. Results OP exposure was not associated with alpha or beta diversity of the gut microbiome. However, the predicted metagenome was sparser and less evenly expressed among those highly exposed to OP (p = 0.04). Additionally, we found that the abundance of two bacterial families, 22 genera, and the predicted expression of 34 Metacyc pathways were associated with long-term OP exposure. These pathways included perturbed processes related to cellular respiration, increased biosynthesis and degradation of compounds related to bacterial wall structure, increased biosynthesis of RNA/DNA precursors, and decreased synthesis of Vitamin B1 and B6. Conclusion In support of previous animal studies and in-vitro findings, our results suggest that ambient chronic OP pesticide exposure alters gut microbiome composition and its predicted metabolism in humans.
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- 2024
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24. Impact of COVID-19 on recorded blood pressure screening and hypertension management in England: an analysis of monthly changes in the quality and outcomes framework indicators in OpenSAFELY
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Richard J McManus, Ben Goldacre, David Evans, Alex J Walker, Christopher Wood, Jessica Morley, Brian MacKenna, Christopher T Rentsch, Seb Bacon, Chris Bates, Helen J Curtis, Amir Mehrkar, Peter Inglesby, Jonathan Cockburn, Laurie Tomlinson, John Parry, Frank Hester, Amelia Green, Miriam Samuel, Rose Higgins, Andrew D Brown, Viyaasan Mahalingasivam, Caroline Morton, Rebecca M Smith, Louis Fisher, Lisa Hopcroft, Jon Massey, Iain Dillingham, Steven Maude, Milan Wiedemann, Colm Andrews, Christine Cunningham, Victoria Speed, and Caroline Walters
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Diseases of the circulatory (Cardiovascular) system ,RC666-701 - Abstract
Background The COVID-19 pandemic disrupted cardiovascular disease management in primary care in England.Objective To describe the impact of the pandemic on blood pressure screening and hypertension management based on a national quality of care scheme (Quality and Outcomes Framework, QOF) across key demographic, regional and clinical subgroups.Methods With NHS England approval, a population-based cohort study was conducted using OpenSAFELY-TPP on 25.2 million NHS patients registered at general practices (March 2019 to March 2023). We examined monthly changes in recorded blood pressure screening in the preceding 5 years in patients aged ≥45 years and recorded the hypertension prevalence and the percentage of patients treated to target (≤140/90 mmHg for patients aged ≤79 years and ≤150/90 mmHg for patients aged ≥80 years) in the preceding 12 months.Results The percentage of patients aged ≥45 years who had blood pressure screening recorded in the preceding 5 years decreased from 90% (March 2019) to 85% (March 2023). Recorded hypertension prevalence was relatively stable at 15% throughout the study period. The percentage of patients with a record of hypertension treated to target in the preceding 12 months reduced from a maximum of 71% (March 2020) to a minimum of 47% (February 2021) in patients aged ≤79 years and from 85% (March 2020) to a minimum of 58% (February 2021) in patients aged ≥80 years before recovery. Blood pressure screening rates in the preceding 5 years remained stable in older people, patients with recorded learning disability or care home status.Conclusions The pandemic substantially disrupted hypertension management QOF indicators, which is likely attributable to general reductions of blood pressure measurement including screening. OpenSAFELY can be used to continuously monitor changes in national quality-of-care schemes to identify changes in key clinical subgroups early and support prioritisation of recovery from care disrupted by COVID-19.
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- 2024
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25. Incidence and treatment of group A streptococcal infections during covid-19 pandemic and 2022 outbreak: retrospective cohort study in England using OpenSAFELY-TPP
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Ben Goldacre, David Evans, Sam Harper, Richard Croker, Christopher Wood, Brian MacKenna, Elizabeth Beech, Chris Bates, Amir Mehrkar, Peter Inglesby, Jonathan Cockburn, John Parry, Frank Hester, Kieran Hand, Helen Curtis, Rose Higgins, Andrew D Brown, Simon Davy, George Hickman, Tom Ward, Rebecca M Smith, Louis Fisher, Iain Dillingham, Steven Maude, Lucy Bridges, Linda Gough, Christine Cunningham, Victoria Speed, Ben FC Butler-Cole, Sebastian CJ Bacon, Thomas O'Dwyer, and Liam C Hart
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Medicine - Abstract
Objective To investigate the effect of the covid-19 pandemic on the number of patients with group A streptococcal infections and related antibiotic prescriptions.Design Retrospective cohort study in England using OpenSAFELY-TPP.Setting Primary care practices in England that used TPP SystmOne software, 1 January 2018 to 31 March 2023, with the approval of NHS England.Participants Patients registered at a TPP practice at the start of each month of the study period. Patients with missing data for sex or age were excluded, resulting in a population of 23 816 470 in January 2018, increasing to 25 541 940 by March 2023.Main outcome measures Monthly counts and crude rates of patients with group A streptococcal infections (sore throat or tonsillitis, scarlet fever, and invasive group A streptococcal infections), and recommended firstline, alternative, and reserved antibiotic prescriptions linked with a group A streptococcal infection before (pre-April 2020), during, and after (post-April 2021) covid-19 restrictions. Maximum and minimum count and rate for each infectious season (time from September to August), as well as the rate ratio of the 2022-23 season compared with the last comparably high season (2017-18).Results The number of patients with group A streptococcal infections, and antibiotic prescriptions linked to an indication of group A streptococcal infection, peaked in December 2022, higher than the peak in 2017-18. The rate ratios for monthly sore throat or tonsillitis (possible group A streptococcal throat infection), scarlet fever, and invasive group A streptococcal infection in 2022-23 relative to 2017-18 were 1.39 (95% confidence interval (CI) 1.38 to 1.40), 2.68 (2.59 to 2.77), and 4.37 (2.94 to 6.48), respectively. The rate ratio for prescriptions of first line, alternative, and reserved antibiotics to patients with group A streptococcal infections in 2022-23 relative to 2017-18 were 1.37 (95% CI 1.35 to 1.38), 2.30 (2.26 to 2.34), and 2.42 (2.24 to 2.61), respectively. For individual antibiotic prescriptions in 2022-23, azithromycin showed the greatest relative increase versus 2017-18, with a rate ratio of 7.37 (6.22 to 8.74). This finding followed a marked decrease in the recording of patients with group A streptococcal infections and associated prescriptions during the period of covid-19 restrictions where the maximum count and rates were lower than any minimum rates before the covid-19 pandemic.Conclusions Recording of rates of scarlet fever, sore throat or tonsillitis, and invasive group A streptococcal infections, and associated antibiotic prescribing, peaked in December 2022. Primary care data can supplement existing infectious disease surveillance through linkages with relevant prescribing data and detailed analysis of clinical and demographic subgroups.
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- 2024
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26. Changes in sick notes associated with COVID-19 from 2020 to 2022: a cohort study in 24 million primary care patients in OpenSAFELY-TPP
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Andrew Steptoe, John Macleod, Daniel McCartney, Aziz Sheikh, Annie Herbert, Ben Goldacre, David Evans, Louise Jones, Sam Harper, Michael Green, Nicholas Timpson, John Wright, Liam Smeeth, Laurie A Tomlinson, Sinead Brophy, Kate Tilling, Andy Gibson, Paola Zaninotto, Stefan Neubauer, Yinghui Wei, Betty Raman, Chloe Park, Alun Hughes, Jonathan Sterne, Elena Lukaschuk, Stefan Piechnik, Angela Wood, Mark Green, Agnieszka Lemanska, Krishnan Bhaskaran, Kathryn Willan, Elsie Horne, Hannah Woodward, Ian Douglas, Andrew Wong, Andy Boyd, Harriet Forbes, Sinéad Langan, Nishi Chaturvedi, Tom Palmer, Kathryn Mansfield, Rachel Denholm, Emily Herrett, Kevin Wang, Bo Hou, Felix Greaves, Laura Sheard, Praveetha Patalay, Kishan Patel, Jessica Morley, Bang Zheng, Charlotte Booth, Spiros Denaxas, Brian MacKenna, Ruth E Costello, Jonathan Kennedy, William Hulme, Michael Parker, Geneviève Cezard, Syed A Shah, Amir Mehrkar, Peter Inglesby, Jonathan Cockburn, Laurie Tomlinson, John Parry, Frank Hester, Eoin McElroy, Amelia Green, Gillian Santorelli, Alisia Carnemolla, Richard Shaw, Samantha Ip, Venexia Walker, Emma L Turner, Richard Thomas, Rebecca Rhead, Archie Campbell, Ellen Thompson, Ruth Bowyer, Jane Maddock, Helen Curtis, Alex Walker, Olivia Hamilton, Rosie McEachan, Ellena Badrick, Stephen Smith, Richard Dobson, Stela McLachlan, Vanessa Ferreira, Vittal Katikireddi, Scott Walker, Lucy Teece, Simon Davy, John Tazare, Bettina Moltrecht, Theocharis Kromydas, Giorgio Di Gessa, Gareth Griffith, Viyaasan Mahalingasivam, Elizabeth Tunnicliffe, George Hickman, Tom Ward, Rebecca M Smith, Sam Parsons, Callum Stewart, Amos Folarin, Daniel Kopasker, Claire Steves, Louis Fisher, Sebastian C J Bacon, Lisa Hopcroft, Robin Y Park, Jon Massey, Iain Dillingham, Steven Maude, Wels Jacques, Linda Nab, Christopher Bates, Milan Wiedemann, Ruth Mitchell, Chao Fang, Fatima Almaghrabi, Jingmin Zhu, Lucy Bridges, Kurt Taylor, Colm Andrews, Jean Stafford, Nathan Cheetham, Sebastian CJ Bacon, Alicja Rapala, Robin Flaig, Andrea L Schaffer, Benjamin FC Butler-Cole, Liam Hart Ben Goldacre, Thomas O’Dwyer, Dylan Williams, Anika Knueppel, Katharine M Evans, Samantha Berman, Matthew Crane, Rebecca Whitehorn, Jacqui Oakley, Diane Foster, Kirsteen C Campbell, Alex Kwong, Ana Goncalves Soares, Renin Toms, Lizzie Huntley, Laura Fox, Rochelle Knight, Northstone Kate, Kanagaratnam Arun, Teri North, Marwa AL Arab, Jose IC Coronado, Arun S Karthikeyan, Ploubidis George, Bozena Wielgoszewska, Charis Bridger-Staatz, Paz Garcia, Maxim Freydin, Amy Roberts, Alex Walker Ben Goldacre, Jess Morley, Anoop Shah Richard Silverwood, Thomas Cowling, Kate Mansfield, Tiffany Yang, Tom Bolton, Alexia Sampri, Elena Rafeti, Robert Willans, Fiona Glen, Steve Sharp, Lee Hamill Howes, Lidia Nigrelli, Fintan McArdle, Chelsea Beckford, Yatharth Ranjan, Jd Carpentieri, Sarah Baz, John Kellas, Laura C Saunders, James M Wild, Peter Jezzard, Zeena-Britt Sanders, Lucy Finnigan, Milla Kibble, Francisco Perez-Reche, Dominik Piehlmaier, and Edward Parker
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Medicine - Abstract
Objectives Long-term sickness absence from employment has negative consequences for the economy and can lead to widened health inequalities. Sick notes (also called ‘fit notes’) are issued by general practitioners when a person cannot work for health reasons for more than 7 days. We quantified the sick note rate in people with evidence of COVID-19 in 2020, 2021 and 2022, as an indication of the burden for people recovering from COVID-19.Design Cohort study.Setting With National Health Service (NHS) England approval, we used routine clinical data (primary care, hospital and COVID-19 testing records) within the OpenSAFELY-TPP database.Participants People 18–64 years with a recorded positive test or diagnosis of COVID-19 in 2020 (n=365 421), 2021 (n=1 206 555) or 2022 (n=1 321 313); general population matched in age, sex and region in 2019 (n=3 140 326), 2020 (n=3 439 534), 2021 (n=4 571 469) and 2022 (n=4 818 870); people hospitalised with pneumonia in 2019 (n=29 673).Primary outcome measure Receipt of a sick note in primary care.Results Among people with a positive SARS-CoV-2 test or COVID-19 diagnosis, the sick note rate was 4.88 per 100 person-months (95% CI 4.83 to 4.93) in 2020, 2.66 (95% CI 2.64 to 2.67) in 2021 and 1.73 (95% CI 1.72 to 1.73) in 2022. Compared with the age, sex and region-matched general population, the adjusted HR for receipt of a sick note over the entire follow-up period (up to 10 months) was 4.07 (95% CI 4.02 to 4.12) in 2020 decreasing to 1.57 (95% CI 1.56 to 1.58) in 2022. The HR was highest in the first 30 days postdiagnosis in all years. Among people hospitalised with COVID-19, after adjustment, the sick note rate was lower than in people hospitalised with pneumonia.Conclusions Given the under-recording of postacute COVID-19-related symptoms, these findings contribute a valuable perspective on the long-term effects of COVID-19. Despite likely underestimation of the sick note rate, sick notes were issued more frequently to people with COVID-19 compared with those without, even in an era when most people are vaccinated. Most sick notes occurred in the first 30 days postdiagnosis, but the increased risk several months postdiagnosis may provide further evidence of the long-term impact.
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- 2024
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27. Exploring risk, antecedents and human costs of living with a retained surgical item: A narrative synthesis of Australian case law 1981-2018
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Osborne, Sonya, Cockburn, Tina, and Davis, Juliet
- Published
- 2022
28. Neighborhood-level Social Determinants of Health and Waitlist Mortality for Liver Transplantation: The Liver Outcomes and Equity Index
- Author
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Zhou, Kali, Lit, Aaron, Kuo, Leane S., Thompson, Laura K., Dodge, Jennifer L., Mehta, Neil, Terrault, Norah A., Ha, Nghiem B., and Cockburn, Myles G.
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- 2024
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29. Efficient implementation of the hybridized Raviart-Thomas mixed method by converting flux subspaces into stabilizations
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Sreevatsa Anantharamu and Bernardo Cockburn
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mixed methods ,hybridization ,static condensation ,hybridizable discontinuous galerkin methods ,Applied mathematics. Quantitative methods ,T57-57.97 - Abstract
We show how to reduce the computational time of the practical implementation of the Raviart-Thomas mixed method for second-order elliptic problems. The implementation takes advantage of a recent result which states that certain local subspaces of the vector unknown can be eliminated from the equations by transforming them into stabilization functions; see the paper published online in JJIAM on August 10, 2023. We describe in detail the new implementation (in MATLAB and a laptop with Intel(R) Core (TM) i7-8700 processor which has six cores and hyperthreading) and present numerical results showing 10 to 20% reduction in the computational time for the Raviart-Thomas method of index $ k $, with $ k $ ranging from 1 to 20, applied to a model problem.
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- 2024
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30. Temporally organized representations of reward and risk in the human brain
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Vincent Man, Jeffrey Cockburn, Oliver Flouty, Phillip E. Gander, Masahiro Sawada, Christopher K. Kovach, Hiroto Kawasaki, Hiroyuki Oya, Matthew A. Howard III, and John P. O’Doherty
- Subjects
Science - Abstract
Abstract The value and uncertainty associated with choice alternatives constitute critical features relevant for decisions. However, the manner in which reward and risk representations are temporally organized in the brain remains elusive. Here we leverage the spatiotemporal precision of intracranial electroencephalography, along with a simple card game designed to elicit the unfolding computation of a set of reward and risk variables, to uncover this temporal organization. Reward outcome representations across wide-spread regions follow a sequential order along the anteroposterior axis of the brain. In contrast, expected value can be decoded from multiple regions at the same time, and error signals in both reward and risk domains reflect a mixture of sequential and parallel encoding. We further highlight the role of the anterior insula in generalizing between reward prediction error and risk prediction error codes. Together our results emphasize the importance of neural dynamics for understanding value-based decisions under uncertainty.
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- 2024
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31. Lung Cancer Prevalence in Virginia: A Spatial Zipcode-Level Analysis via INLA
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Indranil Sahoo, Jinlei Zhao, Xiaoyan Deng, Myles Gordon Cockburn, Kathy Tossas, Robert Winn, and Dipankar Bandyopadhyay
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discrete response ,INLA ,lung cancer ,missing covariate imputation ,spatial data ,zip code-level analysis ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Background: Examining lung cancer (LC) cases in Virginia (VA) is essential due to its significant public health implications. By studying demographic, environmental, and socioeconomic variables, this paper aims to provide insights into the underlying drivers of LC prevalence in the state adjusted for spatial associations at the zipcode level. Methods: We model the available VA zipcode-level LC counts via (spatial) Poisson and negative binomial regression models, taking into account missing covariate data, zipcode-level spatial association and allow for overdispersion. Under latent Gaussian Markov Random Field (GMRF) assumptions, our Bayesian hierarchical model powered by Integrated Nested Laplace Approximation (INLA) considers simultaneous (spatial) imputation of all missing covariates through elegant prediction. The spatial random effect across zip codes follows a Conditional Autoregressive (CAR) prior. Results: Zip codes with elevated smoking indices demonstrated a corresponding increase in LC counts, underscoring the well-established connection between smoking and LC. Additionally, we observed a notable correlation between higher Social Deprivation Index (SDI) scores and increased LC counts, aligning with the prevalent pattern of heightened LC prevalence in regions characterized by lower income and education levels. On the demographic level, our findings indicated higher LC counts in zip codes with larger White and Black populations (with Whites having higher prevalence than Blacks), lower counts in zip codes with higher Hispanic populations (compared to non-Hispanics), and higher prevalence among women compared to men. Furthermore, zip codes with a larger population of elderly people (age ≥ 65 years) exhibited higher LC prevalence, consistent with established national patterns. Conclusions: This comprehensive analysis contributes to our understanding of the complex interplay of demographic and socioeconomic factors influencing LC disparities in VA at the zip code level, providing valuable information for targeted public health interventions and resource allocation. Implementation code is available at GitHub.
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- 2024
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32. First recorded evidence of ejection of a cuckoo egg in a fairy-wren species
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Turner, Richard S, Langmore, Naomi E, Osmond, Helen L, and Cockburn, Andrew
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- 2022
33. The COVID-19 Vaccine Claims Scheme: An overview of the policy document
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Madden, Bill and Cockburn, Tina
- Published
- 2022
34. Interrelated transformative process dynamics in the face of resource nexus challenges: an invitation towards cross case analysis
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Heila Lotz-Sisitka, Claudia Pahl-Wostl, Richard Meissner, Geeske Scholz, Jessica Cockburn, Experencia Madalitso Jalasi, Sabine Stuart-Hill, and Carolyn (Tally) Palmer
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Nadia Sitas ,Water-energy-food nexus ,transformative processes ,social-ecological systems ,social science theory ,cross case analysis ,Human ecology. Anthropogeography ,GF1-900 ,Environmental sciences ,GE1-350 - Abstract
ABSTRACTThe need for more attention to the social and human dimensions in global change sciences and natural resources management requires in-depth understandings of transformative approaches and processes. More inclusive and systemic approaches are needed that embrace complexity and support transformative learning, shifts in power relations, collective and relational agency and structural transformations for adaptive and innovative governance. Scientific understanding of how such change can be brought about is still limited. In this paper, which sets the scene for this Special Issue, we develop a conceptual framework for analyzing transformative processes across a range of diverse cases. Aspects of the conceptual framework are applied, tested and elaborated in three following papers in the Special Issue, deepening understanding of how transformative change in complex social-ecological systems may originate at nexus boundary zones such as that portrayed by the water-food-energy nexus. Specifically, the paper conceptually elaborates four iteratively related dynamics of transformative learning, transforming power relations, transformative agency and transforming structures which intersect in transformation processes. The perspectives offer tools for cross case analysis in the longer term, but also tools for supporting co-engaged, generative research processes.
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- 2024
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35. Clinical decision support systems for maternity care: a systematic review and meta-analysisResearch in context
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Neil Cockburn, Cristina Osborne, Supun Withana, Amy Elsmore, Ramya Nanjappa, Matthew South, William Parry-Smith, Beck Taylor, Joht Singh Chandan, and Krishnarajah Nirantharakumar
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Clinical decision support ,Systematic review ,Maternity ,Obstetrics ,mHealth ,Medicine (General) ,R5-920 - Abstract
Summary: Background: The use of Clinical Decision Support Systems (CDSS) is increasing throughout healthcare and may be able to improve safety and outcomes in maternity care, but maternity care has key differences to other disciplines that complicate the use of CDSS. We aimed to identify evaluated CDSS and synthesise evidence of their impact on maternity care. Methods: We conducted a systematic review for articles published before 24th May 2024 that described i) CDSS that ii) investigated the impact of their use iii) in maternity settings. Medline, CINAHL, CENTRAL and HMIC were searched for articles relating to evaluations of CDSS in maternity settings, with forward- and backward-citation tracing conducted for included articles. Risk of bias was assessed using the Mixed Methods Assessment Tool, and CDSS were described according to the clinical problem, purpose, design, and technical environment. Quantitative results from articles reporting appropriate data were meta-analysed to estimate odds of a CDSS achieving its desired outcome using a multi-level random effects model, first by individual CDSS and then across all CDSS. PROSPERO ID: CRD42022348157. Findings: We screened 12,039 papers and included 87 articles describing 47 unique CDSS. 24 articles (28%) described randomised controlled trials, 30 (34%) described non-randomised interventional studies, 10 (11%) described mixed methods studies, 10 (11%) described qualitative studies, 7 (8%) described quantitative descriptive studies, and 7 (8%) described economic evaluations. 49 (56%) were in High-Income Countries and 38 (44%) in Low- and Middle-Income countries, with no CDSS trialled in both income categories. Meta-analysis of 35 included studies found an odds ratio for improved outcomes of 1.69 (95% confidence interval 1.24–2.30). There was substantial variation in effects, aims, CDSS types, context, study designs, and outcomes. Interpretation: Most CDSS evaluations showed improvements in outcomes, but there was heterogeneity in all aspects of design and evaluation of systems. CDSS are increasingly important in delivering healthcare, and Electronic Health Records and mHealth will increase their availability, but traditional epidemiological methods may be limited in guiding design and demonstrating effectiveness due to rapid CDSS development lifecycles and the complex systems in which they are embedded. Development methods that are attentive to context, such as Human Centred Design, will help to meet this need. Funding: None.
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- 2024
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36. Students' Experience of Isolation Room Punishment in UK Mainstream Education. 'I Can't Put into Words What You Felt Like, Almost a Dog in a Cage'
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Sealy, Julie, Abrams, Elizabeth J., and Cockburn, Tom
- Abstract
Over the past five years, school exclusions have increased in the UK and have become an accepted method of behaviour management. One way of excluding children from mainstream education is through the use of isolation room punishment where children are removed from their classroom and placed in a designated area away from their peers. Isolation units exist in most British schools with each individual school allowed to determine how this system is implemented and managed with little statutory and legislative regulation and oversight. Evidence suggests that best practice standards are lacking, and children placed in isolation room punishment are being denied access to the curriculum and are deprived of physical activities, stimulation and social interaction. Eight young people share their experience of isolation room punishment and their narratives capture their frustration and anger but also their pain and despondency in a system they see as unjust.
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- 2023
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37. A WhatsApp Community Forum for Improving Critical Thinking and Practice Skills of Mental Health Providers in a Conflict Zone
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Pacholek, Kamila, Prostean, Madalina, Burris, Sarah, Cockburn, Lynn, Nganji, Julius, Nadège, Anya Ngo, and Mbibeh, Louis
- Abstract
A violent conflict, known as the Anglophone Crisis has been occuring in the Northwest and Southwest Regions of Cameroon since 2016. This conflict and associated consequences have affected the way healthcare is provided. To help meet the needs of healthcare workers and other service providers, a community of practice called 'The Forum' was established using WhatsApp Messenger. This mobile learning group aimed to support, equip, and encourage practitioners to engage in critical thinking skills, enabling them to incorporate ongoing learning into their practice. A qualitative phenomenological approach was used to evaluate the experiences of 13 Forum participants through in-depth individual interviews. Four themes were identified: (1) interactive learning to enhance critical thinking; (2) self-regulated learning strategies; (3) WhatsApp as an effective platform to support critical thinking and learning in a conflict zone; and (4) application to practice. This study shows that through participating in The Forum, users engaged in critical thinking on various mental health topics and applied new skills to their professional practice. Impacts of this study include practical implications with recommendations for those looking to develop a collaborative learning community in similar conditions, as well as theoretical contributions.
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- 2023
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38. Growing cocoa in semi-arid climate and the rhythmicity of stem growth and leaf flushing determined by dendrometers
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Thainná Waldburger, Thomas Anken, Achim Walter, Hassan-Roland Nasser, Philippe Monney, and Marianne Cockburn
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Yield parameters ,Semi-arid climate ,Cocoa ,Dendrometer ,Science (General) ,Q1-390 ,Social sciences (General) ,H1-99 - Abstract
This study investigated the performance of cocoa trees within an irrigated cocoa plantation situated in the semi-arid region of Bahia, Brazil. Two treatments were compared: “full sun,” where cocoa trees were not shaded, and “shade,” where trees were covered with a shading net absorbing 30 % of the radiation. The number of leaves and the leaf area index (LAI) were assessed using destructive method on 8 trees. In addition, new flushing of leaves, categorized into four flushing stages, were assessed visually on a weekly basis during two years. The variation of the stem diameter was measured using dendrometer sensors (n = 12 trees). Yield parameters like dry bean yield and number of fruits (healthy and aborted) were assessed on 40 trees per treatment. Both treatments, performed well in the semi-arid region. Generative parameters, such as dry bean yield (±2,000 kg/ha), fruit healthy and abortion rate per plot, were unaffected by full sun and shade treatments. The treatments showed high fruit abortion rates of (±60 %), showing that there's still much room for yield optimization. Additionally, stem diameter of the trees showed a significant reduction of the stem growth (daily increase of stem diameter) and maximum daily shrinkage (daily variation of stem diameter) during the flushing of new leaves. This implies that the emergence of new leaves significantly influences stem growth, consequently affecting the fruits which are growing on the stem. This assumption was corroborated by the significantly increased fruit abortion rate during the flushing of new leaves (stages 1 & 2). These findings highlight the potential of dendrometers to quantify this effect what can be used in future to optimize management practices. By doing so, more effective strategies can be developed to enhance cocoa yield and overall productivity in semi-arid regions.
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- 2024
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39. Clinical coding of long COVID in primary care 2020–2023 in a cohort of 19 million adults: an OpenSAFELY analysisResearch in context
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Alasdair D. Henderson, Ben FC. Butler-Cole, John Tazare, Laurie A. Tomlinson, Michael Marks, Mark Jit, Andrew Briggs, Liang-Yu Lin, Oliver Carlile, Chris Bates, John Parry, Sebastian CJ. Bacon, Iain Dillingham, William A. Dennison, Ruth E. Costello, Yinghui Wei, Alex J. Walker, William Hulme, Ben Goldacre, Amir Mehrkar, Brian MacKenna, Emily Herrett, Rosalind M. Eggo, Alex Walker, Amelia Green, Andrea Schaffer, Andrew Brown, Ben Butler-Cole, Caroline Morton, Caroline Walters, Catherine Stables, Christine Cunningham, Christopher Wood, Colm Andrews, David Evans, George Hickman, Helen Curtis, Henry Drysdale, Jessica Morley, Jon Massey, Linda Nab, Lisa Hopcroft, Louis Fisher, Lucy Bridges, Milan Wiedemann, Nicholas DeVito, Orla Macdonald, Peter Inglesby, Rebecca Smith, Richard Croker, Robin Park, Rose Higgins, Sebastian Bacon, Simon Davy, Steven Maude, Thomas O'Dwyer, Tom Ward, Victoria Speed, Liam Hart, Pete Stokes, Krishnan Bhaskaran, Ruth Costello, Thomas Cowling, Ian Douglas, Rosalind Eggo, Stephen Evans, Harriet Forbes, Richard Grieve, Daniel Grint, Sinead Langan, Viyaasan Mahalingasivam, Kathryn Mansfield, Rohini Mathur, Helen McDonald, Edward Parker, Christopher Rentsch, Anna Schultze, Liam Smeeth, Laurie Tomlinson, Jemma Walker, Elizabeth Williamson, Kevin Wing, Angel Wong, Bang Zheng, Christopher Bates, Jonathan Cockburn, Frank Hester, Sam Harper, Shaun O'Hanlon, Alex Eavis, Richard Jarvis, Dima Avramov, Paul Griffiths, Aaron Fowles, Nasreen Parkes, Rafael Perera, David Harrison, Kamlesh Khunti, Jonathan Sterne, and Jennifer Quint
- Subjects
Long COVID ,Vaccination ,Descriptive cohort ,Medicine (General) ,R5-920 - Abstract
Summary: Background: Long COVID is the patient-coined term for the persistent symptoms of COVID-19 illness for weeks, months or years following the acute infection. There is a large burden of long COVID globally from self-reported data, but the epidemiology, causes and treatments remain poorly understood. Primary care is used to help identify and treat patients with long COVID and therefore Electronic Health Records (EHRs) of past COVID-19 patients could be used to help fill these knowledge gaps. We aimed to describe the incidence and differences in demographic and clinical characteristics in recorded long COVID in primary care records in England. Methods: With the approval of NHS England we used routine clinical data from over 19 million adults in England linked to SARS-COV-2 test result, hospitalisation and vaccination data to describe trends in the recording of 16 clinical codes related to long COVID between November 2020 and January 2023. Using OpenSAFELY, we calculated rates per 100,000 person-years and plotted how these changed over time. We compared crude and adjusted (for age, sex, 9 NHS regions of England, and the dominant variant circulating) rates of recorded long COVID in patient records between different key demographic and vaccination characteristics using negative binomial models. Findings: We identified a total of 55,465 people recorded to have long COVID over the study period, which included 20,025 diagnoses codes and 35,440 codes for further assessment. The incidence of new long COVID records increased steadily over 2021, and declined over 2022. The overall rate per 100,000 person-years was 177.5 cases in women (95% CI: 175.5–179) and 100.5 in men (99.5–102). The majority of those with a long COVID record did not have a recorded positive SARS-COV-2 test 12 or more weeks before the long COVID record. Interpretation: In this descriptive study, EHR recorded long COVID was very low between 2020 and 2023, and incident records of long COVID declined over 2022. Using EHR diagnostic or referral codes unfortunately has major limitations in identifying and ascertaining true cases and timing of long COVID. Funding: This research was supported by the National Institute for Health and Care Research (NIHR) (OpenPROMPT: COV-LT2-0073).
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- 2024
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40. Systematic review of feedback literacy instruments for health professions students
- Author
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Mohamad Nabil Mohd Noor, Sahar Fatima, Jessica Grace Cockburn, Muhammad Hibatullah Romli, Vinod Pallath, Wei-Han Hong, Jamuna Vadivelu, and Chan Chong Foong
- Subjects
Science (General) ,Q1-390 ,Social sciences (General) ,H1-99 - Abstract
Successfully managing and utilizing feedback is a critical skill for self-improvement. Properly identifying feedback literacy level is crucial to facilitate teachers and learners especially in clinical learning to plan for better learning experience. The present review aimed to gather and examine the existing definitions and metrics used to assess feedback literacy (or parts of its concepts) for health professions education. A systematic search was conducted on six databases, together with a manual search in January 2023. Quality of the included studies were appraised using the COSMIN Checklist. Information on the psychometric properties and clinical utility of the accepted instruments were extracted. A total 2226 records of studies were identified, and 11 articles included in the final analysis extracting 13 instruments. These instruments can be administered easily, and most are readily accessible. However, ‘appreciating feedback’ was overrepresented compared to the other three features of feedback literacy and none of the instruments had sufficient quality across all COSMIN validity rating sections. Further research studies should focus on developing and refining feedback literacy instruments that can be adapted to many contexts within health professions education. Future research should apply a rigorous methodology to produce a valid and reliable student feedback literacy instrument.
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- 2024
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41. Impact of long COVID on health-related quality-of-life: an OpenSAFELY population cohort study using patient-reported outcome measures (OpenPROMPT)Research in context
- Author
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Oliver Carlile, Andrew Briggs, Alasdair D. Henderson, Ben F.C. Butler-Cole, John Tazare, Laurie A. Tomlinson, Michael Marks, Mark Jit, Liang-Yu Lin, Chris Bates, John Parry, Sebastian C.J. Bacon, Iain Dillingham, William A. Dennison, Ruth E. Costello, Alex J. Walker, William Hulme, Ben Goldacre, Amir Mehrkar, Brian MacKenna, Emily Herrett, Rosalind M. Eggo, Alex Walker, Amelia Green, Andrea Schaffer, Andrew Brown, Ben Butler-Cole, Caroline Morton, Caroline Walters, Catherine Stables, Christine Cunningham, Christopher Wood, Colm Andrews, David Evans, George Hickman, Helen Curtis, Henry Drysdale, Jessica Morley, Jon Massey, Linda Nab, Lisa Hopcroft, Louis Fisher, Lucy Bridges, Milan Wiedemann, Nicholas DeVito, Orla Macdonald, Peter Inglesby, Rebecca Smith, Richard Croker, Robin Park, Rose Higgins, Sebastian Bacon, Simon Davy, Steven Maude, Thomas O'Dwyer, Tom Ward, Victoria Speed, Liam Hart, Pete Stokes, Krishnan Bhaskaran, Ruth Costello, Thomas Cowling, Ian Douglas, Rosalind Eggo, Stephen Evans, Harriet Forbes, Richard Grieve, Daniel Grint, Sinead Langan, Viyaasan Mahalingasivam, Kathryn Mansfield, Rohini Mathur, Helen McDonald, Edward Parker, Christopher Rentsch, Anna Schultze, Liam Smeeth, Laurie Tomlinson, Jemma Walker, Elizabeth Williamson, Kevin Wing, Angel Wong, Bang Zheng, Christopher Bates, Jonathan Cockburn, Frank Hester, Sam Harper, Shaun O'Hanlon, Alex Eavis, Richard Jarvis, Dima Avramov, Paul Griffiths, Aaron Fowles, Nasreen Parkes, Rafael Perera, David Harrison, Kamlesh Khunti, Jonathan Sterne, and Jennifer Quint
- Subjects
Long COVID ,HRQoL ,QALY ,PROMs ,Public aspects of medicine ,RA1-1270 - Abstract
Summary: Background: Long COVID is a major problem affecting patient health, the health service, and the workforce. To optimise the design of future interventions against COVID-19, and to better plan and allocate health resources, it is critical to quantify the health and economic burden of this novel condition. We aimed to evaluate and estimate the differences in health impacts of long COVID across sociodemographic categories and quantify this in Quality-Adjusted Life-Years (QALYs), widely used measures across health systems. Methods: With the approval of NHS England, we utilised OpenPROMPT, a UK cohort study measuring the impact of long COVID on health-related quality-of-life (HRQoL). OpenPROMPT invited responses to Patient Reported Outcome Measures (PROMs) using a smartphone application and recruited between November 2022 and October 2023. We used the validated EuroQol EQ-5D questionnaire with the UK Value Set to develop disutility scores (1-utility) for respondents with and without Long COVID using linear mixed models, and we calculated subsequent Quality-Adjusted Life-Months (QALMs) for long COVID. Findings: The total OpenPROMPT cohort consisted of 7575 individuals who consented to data collection, with which we used data from 6070 participants who completed a baseline research questionnaire where 24.6% self-reported long COVID. In multivariable regressions, long COVID had a consistent impact on HRQoL, showing a higher likelihood or odds of reporting loss in quality-of-life (Odds Ratio (OR): 4.7, 95% CI: 3.72–5.93) compared with people who did not report long COVID. Reporting a disability was the largest predictor of losses of HRQoL (OR: 17.7, 95% CI: 10.37–30.33) across survey responses. Self-reported long COVID was associated with an 0.37 QALM loss. Interpretation: We found substantial impacts on quality-of-life due to long COVID, representing a major burden on patients and the health service. We highlight the need for continued support and research for long COVID, as HRQoL scores compared unfavourably to patients with conditions such as multiple sclerosis, heart failure, and renal disease. Funding: This research was supported by the National Institute for Health and Care Research (NIHR) (OpenPROMPT: COV-LT2-0073).
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- 2024
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42. Outcomes following duodenectomy in patients with familial adenomatous polyposis
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Arthur S. Aelvoet, Isabel Martin, James Cockburn, Cherryl Cabalit, Victoria Cuthill, Duncan Spalding, Olivier Busch, Barbara A.J. Bastiaansen, Susan K. Clark, Evelien Dekker, and Andrew Latchford
- Subjects
Familial adenomatous polyposis ,duodenal surgery ,endoscopic surveillance ,gastric neoplasia ,jejunal neoplasia ,Diseases of the digestive system. Gastroenterology ,RC799-869 - Published
- 2024
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43. Level of diagnostic agreement in musculoskeletal shoulder diagnosis between remote and face‐to‐face consultations: A retrospective service evaluation
- Author
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Louise Cockburn, Gill Baer, and Jenna Rhodes
- Subjects
diagnosis ,musculoskeletal disorders ,physiotherapy ,remote ,shoulder ,telemedicine ,Medicine - Abstract
Abstract Background and Aims To determine the level of diagnostic agreement between remote and face‐to‐face consultation in assessing shoulder complaints. Methods A retrospective service evaluation with three groups of patient data; those assessed only face‐to‐face (group 1), remotely then face‐to‐face (group 2), remotely only (group 3). Patient data were extracted from 6 secondary care shoulder Advanced Physiotherapy Practitioner's (APPs) records, covering six sites. Three‐hundred‐and‐fifty‐nine sets of patient data were included in the final evaluation. The main outcome measure was the percentage of agreement between diagnosis at initial and follow‐up consultation, when assessed by APPs across the three groups. A Pearson χ2 test was used to assess the relationship between the method of consultation and the level of diagnostic agreement. Diagnoses were categorized as either the same, similar, or different by an independent APP. Secondary outcome measures investigated whether age or the length of time between appointments had any effect in determining the level of diagnostic concordance. Results There was exact agreement of 77.05% and 85.52% for groups 1 and 3, respectively, compared with 34.93% for patient data in group 2. Similar clinical impressions across both initial and follow‐up were seen 16.39% of the time in group 1, 7.24% of the time in group 3, and 36.99% in group 2. Lastly, the percentage of times a diagnosis was changed between initial and review appointments occurred in only 6.56% of group 1 contacts, 7.24% of group 3 contacts, but 28.08% of the time in group 2. Conclusion There was a large mismatch in the diagnosis of musculoskeletal shoulder complaints, when patients are initially assessed remotely and then followed‐up in‐person. This has implications for the future provision of shoulder assessment in physiotherapy.
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- 2024
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44. Ceramide-1-phosphate is a regulator of Golgi structure and is co-opted by the obligate intracellular bacterial pathogen Anaplasma phagocytophilum
- Author
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Curtis B. Read, Anika N. Ali, Daniel J. Stephenson, H. Patrick Macknight, Kenneth D. Maus, Chelsea L. Cockburn, Minjung Kim, Xiujie Xie, Jason A. Carlyon, and Charles E. Chalfant
- Subjects
ceramide-1-phosphate ,Golgi ,GRASP ,GoRASP ,ceramide kinase ,ceramide-1-phosphate transport protein ,Microbiology ,QR1-502 - Abstract
ABSTRACTMany intracellular pathogens structurally disrupt the Golgi apparatus as an evolutionarily conserved promicrobial strategy. Yet, the host factors and signaling processes involved are often poorly understood, particularly for Anaplasma phagocytophilum, the agent of human granulocytic anaplasmosis. We found that A. phagocytophilum elevated cellular levels of the bioactive sphingolipid, ceramide-1-phosphate (C1P), to promote Golgi fragmentation that enables bacterial proliferation, conversion from its non-infectious to infectious form, and productive infection. A. phagocytophilum poorly infected mice deficient in ceramide kinase, the Golgi-localized enzyme responsible for C1P biosynthesis. C1P regulated Golgi morphology via activation of a PKCα/Cdc42/JNK signaling axis that culminates in phosphorylation of Golgi structural proteins, GRASP55 and GRASP65. siRNA-mediated depletion of Cdc42 blocked A. phagocytophilum from altering Golgi morphology, which impaired anterograde trafficking of trans-Golgi vesicles into and maturation of the pathogen-occupied vacuole. Cells overexpressing phosphorylation-resistant versions of GRASP55 and GRASP65 presented with suppressed C1P- and A. phagocytophilum-induced Golgi fragmentation and poorly supported infection by the bacterium. By studying A. phagocytophilum, we identify C1P as a regulator of Golgi structure and a host factor that is relevant to disease progression associated with Golgi fragmentation.IMPORTANCECeramide-1-phosphate (C1P), a bioactive sphingolipid that regulates diverse processes vital to mammalian physiology, is linked to disease states such as cancer, inflammation, and wound healing. By studying the obligate intracellular bacterium Anaplasma phagocytophilum, we discovered that C1P is a major regulator of Golgi morphology. A. phagocytophilum elevated C1P levels to induce signaling events that promote Golgi fragmentation and increase vesicular traffic into the pathogen-occupied vacuole that the bacterium parasitizes. As several intracellular microbial pathogens destabilize the Golgi to drive their infection cycles and changes in Golgi morphology is also linked to cancer and neurodegenerative disorder progression, this study identifies C1P as a potential broad-spectrum therapeutic target for infectious and non-infectious diseases.
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- 2024
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45. Prehabilitation and Supportive Care in Oncology Treatment for women with Breast Cancer (PROactive-B) receiving neoadjuvant chemotherapy: program development and feasibility
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S Grant, S. Graham, S. Kumar, K. Kerin-Ayers, S. Kay, C. Mak, S. Wahlroos, S. Templeton, J. Cockburn, A. Malalsakera, J. Stehn, M. Gonzalez, G. Heller, K. Zavitsanou, and J. Lacey
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Published
- 2024
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46. Changes in opioid prescribing during the COVID-19 pandemic in England: an interrupted time-series analysis in the OpenSAFELY-TPP cohort
- Author
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Bridges, Lucy, Butler-Cole, Benjamin FC, Davy, Simon, Dillingham, Iain, Evans, David, Fisher, Louis, Green, Amelia, Hart, Liam, Hickman, George, Maude, Steven, O'Dwyer, Thomas, Smith, Rebecca M, Stokes, Pete, Ward, Tom, Cockburn, Johnathan, Harper, Sam, Hester, Frank, Parry, John, Schaffer, Andrea L, Andrews, Colm D, Brown, Andrew D, Croker, Richard, Hulme, William J, Nab, Linda, Quinlan, Jane, Speed, Victoria, Wood, Christopher, Wiedemann, Milan, Massey, Jon, Inglesby, Peter, Bacon, Seb C J, Mehrkar, Amir, Bates, Chris, Goldacre, Ben, Walker, Alex J, and MacKenna, Brian
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- 2024
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47. mRNA vaccine against malaria tailored for liver-resident memory T cells
- Author
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Ganley, Mitch, Holz, Lauren E., Minnell, Jordan J., de Menezes, Maria N., Burn, Olivia K., Poa, Kean Chan Yew, Draper, Sarah L., English, Kieran, Chan, Susanna T. S., Anderson, Regan J., Compton, Benjamin J., Marshall, Andrew J., Cozijnsen, Anton, Chua, Yu Cheng, Ge, Zhengyu, Farrand, Kathryn J., Mamum, John C., Xu, Calvin, Cockburn, Ian A., Yui, Katsuyuki, Bertolino, Patrick, Gras, Stephanie, Le Nours, Jérôme, Rossjohn, Jamie, Fernandez-Ruiz, Daniel, McFadden, Geoffrey I., Ackerley, David F., Painter, Gavin F., Hermans, Ian F., and Heath, William R.
- Published
- 2023
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48. Hybridizable discontinuous Galerkin methods for second-order elliptic problems: overview, a new result and open problems
- Author
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Cockburn, Bernardo
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- 2023
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49. Lung Cancer Mortality Racial/Ethnic Disparities in Patient Experiences with Care: a SEER-CAHPS Study
- Author
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Farias, Albert J., Chan, Emily, Navarro, Stephanie, David, Elizabeth A., Eguchi, Megan, and Cockburn, Myles
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- 2023
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50. The role of starch digestion in the brewing of gluten-free beers
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Ledley, Andrew J., Elias, Ryan J., and Cockburn, Darrell W.
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- 2024
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