163 results on '"Bogucki, Jacek"'
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2. Synthesis and anthelmintic activity of novel thiosemicarbazide and 1,2,4-triazole derivatives: In vitro, in vivo, and in silico study
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Kołodziej, Przemysław, Wujec, Monika, Doligalska, Maria, Makuch-Kocka, Anna, Khylyuk, Dmytro, Bogucki, Jacek, Demkowska-Kutrzepa, Marta, Roczeń-Karczmarz, Monika, Studzińska, Maria, Tomczuk, Krzysztof, Kocki, Marcin, Reszka-Kocka, Patrycja, Granica, Sebastian, Typek, Rafał, Dawidowicz, Andrzej L., Kocki, Janusz, and Bogucka-Kocka, Anna
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- 2024
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3. Chronic intestinal schistosomiasis caused by co-infection with Schistosoma intercalatum and Schistosoma mansoni
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Kołodziej, Przemysław, Szostakowska, Beata, Lass, Anna, Sulima, Małgorzata, Sikorska, Katarzyna, Kocki, Janusz, Krupski, Witold, Starownik, Dorota, Bojar, Paweł, Szumiło, Justyna, Kasztelan-Szczerbińska, Beata, Cichoż-Lach, Halina, Bogucki, Jacek, Szymańska, Magdalena, Fota-Markowska, Hanna, and Bogucka-Kocka, Anna
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- 2024
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4. Psychological consequences of hospital isolation during the COVID-19 pandemic - research on the sample of polish firefighting academy students
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Walecka, Irena, Ciechanowicz, Piotr, Dopytalska, Klaudia, Mikucka-Wituszynska, Agata, Szymanska, Elzbieta, Bogucki, Jacek, Kock, Janusz, Kulakowska, Karolina, and Tuszynska-Bogucka, Wioletta
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Students -- Psychological aspects -- Health aspects ,Epidemics -- Control -- Psychological aspects ,Quarantine -- Psychological aspects ,Psychology and mental health - Abstract
Currently, a very important thread of research on COVID-19 is to determine the dimension of the psychopathological emotional reactions induced by the COVID-19 pandemic. A non-experimental online research project was designed to determine the predictors of the severity of psychopathological symptoms, such as depression and PTSD symptoms, and the nature of the feedback mechanism between them in groups of men, remaining in hospital isolation due to infection and at-home isolation during the COVID-19 epidemic. The presence of symptoms of depression, post-traumatic stress disorder (PTSD) and a sense of threat due to the pandemic were assessed using the following screening tests: IES-R by Weiss and Marmar, PHQ-9 by Spitzer et al., and a self-constructed sliding scale for assessing COVID-19 anxiety. The study was carried out on a group of 57 firefighting cadets, hospitalized in a COVID-19 isolation room (M.sub.age = 23.01), staying in isolation due to SARS-CoV-2 virus infection and a control group of 57 healthy men (M.sub.age = 41.38) staying at home during quarantine and national lockdown. COVID-19 pandemic causes many psychopathological reactions. The predictive models revealed that the predictors of symptoms of PTSD in isolated patients included depression and the experienced sense of COVID-19 threat resulting from the disease, while in the control group the symptoms of depression were the only predictor of PTSD. PTSD experiences are usually associated with depression. It may also be a form of the re-experiencing process or the effect of high affectivity, indirectly confirmed by the participation of hyperarousal in the feedback loop. Our findings highlight the importance of mental health aspects in patients treated during the COVID-19 pandemic. The COVID-19 pandemic requires social distancing, quarantine and isolation, which may cause psychopathological symptoms not only in affected people, but also in the general population. Moreover, the need for greater psychological support can be emphasized for both: the sick and the general population., Author(s): Irena Walecka [sup.1] , Piotr Ciechanowicz [sup.1] , Klaudia Dopytalska [sup.1] , Agata Mikucka-Wituszynska [sup.1] , Elzbieta Szymanska [sup.1] , Jacek Bogucki [sup.2] , Janusz Kock [sup.2] , Karolina [...]
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- 2023
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5. Expression of the Tau Protein and Amyloid Protein Precursor Processing Genes in the CA3 Area of the Hippocampus in the Ischemic Model of Alzheimer’s Disease in the Rat
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Pluta, Ryszard, Ułamek-Kozioł, Marzena, Kocki, Janusz, Bogucki, Jacek, Januszewski, Sławomir, Bogucka-Kocka, Anna, and Czuczwar, Stanisław J.
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- 2020
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6. Effect of sodium dichloroacetate on apoptotic gene expression in human leukemia cell lines
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Abramek, Jagoda, Bogucki, Jacek, Ziaja-Sołtys, Marta, Stępniewski, Andrzej, and Bogucka-Kocka, Anna
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- 2019
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7. Apoptosis, Autophagy, and Mitophagy Genes in the CA3 Area in an Ischemic Model of Alzheimer's Disease with 2-Year Survival.
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Pluta, Ryszard, Bogucka-Kocka, Anna, Bogucki, Jacek, Kocki, Janusz, and Czuczwar, Stanisław J.
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CELL death ,ALZHEIMER'S disease ,GENETIC regulation ,GENE expression ,GENETIC overexpression ,AUTOPHAGY - Abstract
Background: Currently, no evidence exists on the expression of apoptosis (CASP3), autophagy (BECN1), and mitophagy (BNIP3) genes in the CA3 area after ischemia with long-term survival. Objective: The goal of the paper was to study changes in above genes expression in CA3 area after ischemia in the period of 6–24 months. Methods: In this study, using quantitative RT-PCR, we present the expression of genes associated with neuronal death in a rat ischemic model of Alzheimer's disease. Results: First time, we demonstrated overexpression of the CASP3 gene in CA3 area after ischemia with survival ranging from 0.5 to 2 years. Overexpression of the CASP3 gene was accompanied by a decrease in the activity level of the BECN1 and BNIP3 genes over a period of 0.5 year. Then, during 1-2 years, BNIP3 gene expression increased significantly and coincided with an increase in CASP3 gene expression. However, BECN1 gene expression was variable, increased significantly at 1 and 2 years and was below control values 1.5 years post-ischemia. Conclusions: Our observations suggest that ischemia with long-term survival induces neuronal death in CA3 through activation of caspase 3 in cooperation with the pro-apoptotic gene BNIP3. This study also suggests that the BNIP3 gene regulates caspase-independent pyramidal neuronal death post-ischemia. Thus, caspase-dependent and -independent death of neuronal cells occur post-ischemia in the CA3 area. Our data suggest new role of the BNIP3 gene in the regulation of post-ischemic neuronal death in CA3. This suggests the involvement of the BNIP3 together with the CASP3 in the CA3 in neuronal death post-ischemia. [ABSTRACT FROM AUTHOR]
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- 2024
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8. Ischemic tau protein gene induction as an additional key factor driving development of Alzheimer’s phenotype changes in CA1 area of hippocampus in an ischemic model of Alzheimer’s disease
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Pluta, Ryszard, Bogucka-Kocka, Anna, Ułamek-Kozioł, Marzena, Bogucki, Jacek, Januszewski, Sławomir, Kocki, Janusz, and Czuczwar, Stanisław J.
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- 2018
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9. Autophagy, mitophagy and apoptotic gene changes in the hippocampal CA1 area in a rat ischemic model of Alzheimer’s disease
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Ułamek-Kozioł, Marzena, Kocki, Janusz, Bogucka-Kocka, Anna, Januszewski, Sławomir, Bogucki, Jacek, Czuczwar, Stanisław J., and Pluta, Ryszard
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- 2017
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10. Alpha-, Beta-, and Gamma-Secretase, Amyloid Precursor Protein, and Tau Protein Genes in the Hippocampal CA3 Subfield in an Ischemic Model of Alzheimer's Disease with Survival up to 2 Years.
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Czuczwar, Stanisław J., Kocki, Janusz, Miziak, Barbara, Bogucki, Jacek, Bogucka-Kocka, Anna, and Pluta, Ryszard
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AMYLOID beta-protein precursor ,ALZHEIMER'S disease ,TAU proteins ,AMYLOID ,GENE expression ,GENES ,PYRAMIDAL neurons ,AMYLOID plaque - Abstract
Background: Understanding the phenomena underlying the non-selective susceptibility to ischemia of pyramidal neurons in the CA3 is important from the point of view of elucidating the mechanisms of memory loss and the development of dementia. Objective: The aim of the study was to investigate changes in genes expression of amyloid precursor protein, its cleaving enzymes and tau protein in CA3 post-ischemia with survival of 12–24 months. Methods: We used an ischemic model of Alzheimer's disease to study the above genes using an RT-PCR protocol. Results: The expression of the amyloid precursor protein gene was above the control values at all times post-ischemia. The expression of the α-secretase gene also exceeded the control values post-ischemia. The expression of the β-secretase gene increased 12 and 24 months post-ischemia, and 18 months was below control values. Presenilin 1 and 2 genes expression was significantly elevated at all times post-ischemia. Also, tau protein gene expression was significantly elevated throughout the observation period, and peak gene expression was present 12 months post-ischemia. Conclusions: The study suggests that the genes studied are involved in the non-amyloidogenic processing of amyloid precursor protein. Additionally data indicate that brain ischemia with long-term survival causes damage and death of pyramidal neurons in the CA3 area of the hippocampus in a modified tau protein-dependent manner. Thus defining a new and important mechanism of pyramidal neuronal death in the CA3 area post-ischemia. In addition expression of tau protein gene modification after brain ischemia is useful in identifying ischemic mechanisms occurring in Alzheimer's disease. [ABSTRACT FROM AUTHOR]
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- 2024
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11. Alzheimer-associated presenilin 2 gene is dysregulated in rat medial temporal lobe cortex after complete brain ischemia due to cardiac arrest
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Pluta, Ryszard, Kocki, Janusz, Ułamek-Kozioł, Marzena, Bogucka-Kocka, Anna, Gil-Kulik, Paulina, Januszewski, Sławomir, Jabłoński, Mirosław, Petniak, Alicja, Brzozowska, Judyta, Bogucki, Jacek, Furmaga-Jabłońska, Wanda, and Czuczwar, Stanisław J.
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- 2016
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12. Association between Resistant Arterial Hypertension, Type 2 Diabetes, and Selected microRNAs.
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Błaszczyk, Robert, Petniak, Alicja, Bogucki, Jacek, Kocki, Janusz, Wysokiński, Andrzej, and Głowniak, Andrzej
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TYPE 2 diabetes ,MANN Whitney U Test ,GENE expression ,MICRORNA ,BIOMARKERS - Abstract
Introduction: In recent years, a very close relationship between miRNA and cardiovascular diseases has been found. RAH and T2DM are accompanied by a change in the microRNA expression spectrum. Objectives: This study aimed to evaluate the clinical characteristics and expression of selected microRNAs in patients with idiopathic RAH and T2DM. Patients and methods: A total of 115 patients with RAH were included in this study. Among them were 53 patients (46.09%) with T2DM. miRNA levels were determined using quantitative real-time polymerase chain reaction. The expression of the examined genes was calculated from the formula RQ = 2
−ΔΔCT . Results: Analysis using the Mann–Whitney U test showed a statistically significant (p < 0.05) difference in the expression of MIR1-1 (p = 0.031) and MIR195 (p = 0.042) associated with the occurrence of T2DM in the subjects. The value of MIR1-1 gene expression was statistically significantly higher in patients with T2DM (median: 0.352; mean: 0.386; standard deviation: 0.923) compared to patients without T2DM (median: 0.147; mean: −0.02; standard deviation: 0.824). The value of MIR195 gene expression was statistically significantly higher in patients with T2DM (median: 0.389, mean: 0.442; standard deviation: 0.819) compared to patients without T2DM (median: −0.027; mean: 0.08; standard deviation: 0.942). Conclusions: The values of MIR1-1 and MIR195 gene expression were statistically significantly higher in patients with RAH and T2DM compared to patients with RAH and without T2DM. Further studies are necessary to precisely clarify the roles of miRNAs in patients with RAH and T2DM. They should demonstrate the utility of these genetic markers in clinical practice. [ABSTRACT FROM AUTHOR]- Published
- 2024
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13. LRP1 and RAGE Genes Transporting Amyloid and Tau Protein in the Hippocampal CA3 Area in an Ischemic Model of Alzheimer's Disease with 2-Year Survival.
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Pluta, Ryszard, Kocki, Janusz, Bogucki, Jacek, Bogucka-Kocka, Anna, and Czuczwar, Stanisław J.
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ALZHEIMER'S disease ,TAU proteins ,RECEPTOR for advanced glycation end products (RAGE) ,CEREBRAL ischemia ,GENE expression ,AMYLOID ,GENES - Abstract
Explaining changes at the gene level that occur during neurodegeneration in the CA3 area is crucial from the point of view of memory impairment and the development of post-ischemic dementia. An ischemic model of Alzheimer's disease was used to evaluate changes in the expression of genes related to amyloid transport in the CA3 region of the hippocampus after 10 min of brain ischemia with survival of 2, 7 and 30 days and 12, 18 and 24 months. The quantitative reverse transcriptase PCR assay revealed that the expression of the LRP1 and RAGE genes involved in amyloid transport was dysregulated from 2 days to 24 months post-ischemia in the CA3 area of the hippocampus. LRP1 gene expression 2 and 7 days after ischemia was below control values. However, its expression from day 30 to 24 months, survival after an ischemic episode was above control values. RAGE gene expression 2 days after ischemia was below control values, reaching a maximum increase 7 and 30 days post-ischemia. Then, after 12, 18 and 24 months, it was again below the control values. The data indicate that in the CA3 area of the hippocampus, an episode of brain ischemia causes the increased expression of the RAGE gene for 7–30 days during the acute phase and that of LRP1 from 1 to 24 months after ischemia during the chronic stage. In other words, in the early post-ischemic stage, the expression of the gene that transport amyloid to the brain increases (7–30 days). Conversely, in the late post-ischemic stage, amyloid scavenging/cleaning gene activity increases, reducing and/or preventing further neuronal damage or facilitating the healing of damaged sites. This is how the new phenomenon of pyramidal neuronal damage in the CA3 area after ischemia is defined. In summary, post-ischemic modification of the LRP1 and RAGE genes is useful in the study of the ischemic pathways and molecular factors involved in the development of Alzheimer's disease. [ABSTRACT FROM AUTHOR]
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- 2023
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14. Surgical resection of lung cancer inhibits mRNA expression of GOT2 gene encoding kynurenine aminotransferase in leukocytes.
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Prystupa, Tomasz Karol, Sagan, Dariusz, Kocki, Janusz, Kocki, Tomasz, Szymanowski, Rafał, and Bogucki, Jacek
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- 2023
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15. Preservation of Biomarkers Associated with Alzheimer's Disease (Amyloid Peptides 1-38, 1-40, 1-42, Tau Protein, Beclin 1) in the Blood of Neonates after Perinatal Asphyxia.
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Tarkowska, Agata, Furmaga-Jabłońska, Wanda, Bogucki, Jacek, Kocki, Janusz, and Pluta, Ryszard
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ASPHYXIA neonatorum ,ALZHEIMER'S disease ,TAU proteins ,PATHOLOGICAL physiology ,BLOOD proteins ,AMYLOID ,NEWBORN infants - Abstract
Perinatal asphyxia is a complex disease involving massive death of brain cells in full-term newborns. The most impressive consequence of perinatal asphyxia is a neurodegenerative brain injury called hypoxic–ischemic encephalopathy. Management of newborns after perinatal asphyxia is very difficult due to the lack of measurable biomarkers that would be able to assess the severity of the brain injury in the future, help in the selection of therapy, assess the results of treatment and determine the prognosis for the future. Thus, these limitations make long-term neurodevelopmental outcomes unpredictable during life. Quantifying biomarkers that can detect subclinical changes at a stage where routine brain monitoring or imaging is still mute would be a major advance in the care of neonates with brain neurodegeneration after asphyxia. Understanding the effect of perinatal asphyxia on changes in blood neurodegenerative biomarkers over time, which would be commonly used to assess the severity of postpartum encephalopathy, would be an important step in developing precision in predicting the consequences of brain injuries. We urgently need more accurate early predictive markers to guide clinicians when to use neuroprotective therapy. The needed neurodegenerative biomarkers may represent neuronal pathological changes that can be recognized by new technologies such as genomic and proteomic. Nevertheless, the simultaneous blood tau protein and various amyloid changes with the addition of an autophagy marker beclin 1 after perinatal asphyxia have not been studied. We decided to evaluate serum biomarkers of neuronal injury characteristic for Alzheimer's disease such as amyloid peptides (1-38, 1-40 and 1-42), tau protein and beclin 1, which can predict the progression of brain neurodegeneration in future. In this paper, we report for the first time the significant changes in the above molecules in the blood after asphyxia compared to healthy controls during the 1–7, 8–14 and 15+ days ELISA test. [ABSTRACT FROM AUTHOR]
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- 2023
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16. ' Be the Match '. Predictors of Decisions Concerning Registration as a Potential Bone Marrow Donor—A Psycho-Socio-Demographic Study.
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Bogucki, Jacek and Tuszyńska-Bogucka, Wioletta
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- 2023
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17. Affective computing with eye-tracking data in the study of the visual perception of architectural spaces
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Chmielewska Magdalena, Dzieńkowski Mariusz, Bogucki Jacek, Kocki Wojciech, Kwiatkowski Bartłomiej, Pełka Jarosław, and Tuszyńska-Bogucka Wioletta
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Engineering (General). Civil engineering (General) ,TA1-2040 - Abstract
In the presented study the usefulness of eye-tracking data for classification of architectural spaces as stressful or relaxing was examined. The eye movements and pupillary response data were collected using the eye-tracker from 202 adult volunteers in the laboratory experiment in a well-controlled environment. Twenty features were extracted from the eye-tracking data and after the selection process the features were used in automated binary classification with a variety of machine learning classifiers including neural networks. The results of the classification using eye-tracking data features yielded 68% accuracy score, which can be considered satisfactory. Moreover, statistical analysis showed statistically significant differences in eye activity patterns between visualisations labelled as stressful or relaxing.
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- 2019
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18. Analysis of Changes in the Expression of Selected Genes from the ABC Family in Patients with Triple-Negative Breast Cancer.
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Makuch-Kocka, Anna, Kocki, Janusz, Brzozowska, Anna, Bogucki, Jacek, Kołodziej, Przemysław, and Bogucka-Kocka, Anna
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TRIPLE-negative breast cancer ,PATIENTS' families ,GENE expression ,BRCA genes ,GENETIC regulation ,GENE expression profiling - Abstract
Triple-negative breast cancer (TNBC) is characterized by a lack of expression of hormone receptors (estrogen and progesterone), as cancer cells also do not overexpress the HER2 receptor. Due to their molecular profile, treatments for this type of breast cancer are limited. In some cases, the pharmacotherapy of patients with TNBC is hindered by the occurrence of multidrug resistance, which is largely conditioned by proteins encoded by genes from the ABC family. The aim of our study was to determine the expression profile of 14 selected genes from the ABC family using real-time PCR in 68 patients with TNBC by comparing the obtained results with clinical data and additionally using bioinformatics tools (Ualcan and The Breast Cancer Gene Expression Miner v4.8 (bc -GenExMiner v4.8)), as well as by comparing experimental data with data in the Cancer Genome Atlas (TCGA) database. Based on the conducted studies, we found different levels of gene expression depending on the age of patients, tumor sizes, metastases to lymph nodes, cell infiltration into adipose tissue, tumor stages, or lymphovascularinvasion. The results of the presented studies demonstrate the effect of the expression level of the studied genes on the clinical course and prognosis of patients with TNBC, and suggest how profiling the expression level of genes from the ABC family may be a useful tool in determining personalized TNBC treatment. [ABSTRACT FROM AUTHOR]
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- 2023
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19. Next-Generation Sequencing in the Assessment of the Transcriptomic Landscape of DNA Damage Repair Genes in Abdominal Aortic Aneurysm, Chronic Venous Disease and Lower Extremity Artery Disease.
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Ruszel, Karol P., Zalewski, Daniel P., Stępniewski, Andrzej, Gałkowski, Dariusz, Bogucki, Jacek, Feldo, Marcin, Płachno, Bartosz J., Kocki, Janusz, and Bogucka-Kocka, Anna
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ABDOMINAL aortic aneurysms ,NUCLEOTIDE sequencing ,ARTERIAL diseases ,LANDSCAPE assessment ,DNA repair ,GENE expression - Abstract
Vascular diseases are one of the most common causes of death and morbidity. Lower extremity artery disease (LEAD), abdominal aortic aneurysm (AAA) and chronic venous disease (CVD) belong to this group of conditions and exhibit various presentations and courses; thus, there is an urgent need for revealing new biomarkers for monitoring and potential treatment. Next-generation sequencing of mRNA allows rapid and detailed transcriptome analysis, allowing us to pinpoint the most pronounced differences between the mRNA expression profiles of vascular disease patients. Comparison of expression data of 519 DNA-repair-related genes obtained from mRNA next-generation sequencing revealed significant transcriptomic marks characterizing AAA, CVD and LEAD. Statistical, gene set enrichment analysis (GSEA), gene ontology (GO) and literature analyses were applied and highlighted many DNA repair and accompanying processes, such as cohesin functions, oxidative stress, homologous recombination, ubiquitin turnover, chromatin remodelling and DNA double-strand break repair. Surprisingly, obtained data suggest the contribution of genes engaged in the regulatory function of DNA repair as a key component that could be used to distinguish between analyzed conditions. DNA repair–related genes depicted in the presented study as dysregulated in AAA, CVD and LEAD could be utilized in the design of new biomarkers or therapies associated with these diseases. [ABSTRACT FROM AUTHOR]
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- 2023
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20. To Vaccinate or Not to Vaccinate—Reasons of Willingness and Reluctance of Students against SARS-CoV-2 Vaccination—An International Experience.
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Sitarz, Ryszard, Forma, Alicja, Karakuła, Kaja, Juchnowicz, Dariusz, Baj, Jacek, Bogucki, Jacek, Rog, Joanna, Tee, Michael L., Tee, Cherica A., Ly-Uson, Josefina T., Islam, Md. Saiful, Sikder, Md. Tajuddin, El-Monshed, Ahmed Hashem, Loutfy, Ahmed, Qureshi, Muhammad Fazal Hussain, Abbas, Munib, Taseen, Shafaq, Lakhani, Mahira, Wang, Cuiyan, and Wan, Xiaoyang
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- 2022
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21. Elastography as a possible useful method of assessment of skin involvement in systemic sclerosis.
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Sobolewski, Piotr, Dźwigała, Monika, Zakrzewski, Jakub, Paluch, Łukasz, Bogucki, Jacek, Szymańska, Elżbieta, and Walecka, Irena
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SYSTEMIC scleroderma ,ELASTOGRAPHY ,PATHOGENESIS ,SKIN diseases ,SEVERITY of illness index - Abstract
Introduction: Scleroderma (Sc) is a connective tissue disorder associated with internal organ involvement, increased mortality, and unknown pathogenesis. It has been found that the more extensive the skin involvement the more severe internal organ manifestations and increased disability. The Rodnan skin score (RSS) is one of the established methods to examine skin thickness among patients with Sc. Due to RSS limitations, for instance, lack of detection of subclinical changes, a new tool is needed for the evaluation of Sc. In recent studies, shear wave elastography (SWE) has been examined as a potential tool to assess skin involvement through the evaluation of skin strain. Aim: To verify whether elastography is a reliable method to examine Sc progression and possibly provide one useful site to perform the examination - as an easy, cheap, and reliable examination tool. Material and methods: Forty Sc patients were examined, and 28 healthy individuals were recruited for the control group. Among the patients and control group, skin thickness was assessed using the RSS and skin strain measurements using elastography in 20 body locations. Results: SWE in the right-hand finger can be treated as an important diagnostic indicator of the severity of Sc. Conclusions: SWE is a reliable method for evaluating skin involvement among patients with systemic sclerosis (SSc). Right finger measurements correlate positively with Rodnan's results and can be a predictor of the severity of SSc. This study found SWE to be a reliable method for examining SSc progression and possibly one useful site for the examination. [ABSTRACT FROM AUTHOR]
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- 2022
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22. Hypothermia after Perinatal Asphyxia Does Not Affect Genes Responsible for Amyloid Production in Neonatal Peripheral Lymphocytes.
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Tarkowska, Agata, Furmaga-Jabłońska, Wanda, Bogucki, Jacek, Kocki, Janusz, and Pluta, Ryszard
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ASPHYXIA neonatorum ,AMYLOID beta-protein precursor ,LYMPHOCYTES ,AMYLOID ,HYPOTHERMIA - Abstract
In this study, the expression of the genes of the amyloid protein precursor, β-secretase, presenilin 1 and 2 by RT-PCR in the lymphocytes of newborns after perinatal asphyxia and perinatal asphyxia treated with hypothermia was analyzed at the age of 15–21 days. The relative quantification of Alzheimer's-disease-related genes was first performed by comparing the peripheral lymphocytes of non-asphyxia control versus those with asphyxia or asphyxia with hypothermia. In the newborns who had perinatal asphyxia, the peripheral lymphocytes presented a decreased expression of the amyloid protein precursor and β-secretase genes. On the other hand, the expression of the presenilin 1 and 2 genes increased in the studied group. The expression of the studied genes in the asphyxia group treated with hypothermia had an identical pattern of changes that were not statistically significant to the asphyxia group. This suggests that the expression of the genes involved in the metabolism of the amyloid protein precursor in the peripheral lymphocytes may be a biomarker of progressive pathological processes in the brain after asphyxia that are not affected by hypothermia. These are the first data in the world showing the role of hypothermia in the gene changes associated with Alzheimer's disease in the peripheral lymphocytes of newborns after asphyxia. [ABSTRACT FROM AUTHOR]
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- 2022
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23. Increased Markers of Oxidative Stress and Positive Correlation Low-Grade Inflammation with Positive Symptoms in the First Episode of Schizophrenia in Drug-Naïve Patients.
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Dudzińska, Ewa, Szymona, Kinga, Bogucki, Jacek, Koch, Wojciech, Cholewińska, Ewelina, Sitarz, Robert, and Ognik, Katarzyna
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OXIDATIVE stress ,PEOPLE with schizophrenia ,YOUNG adults ,SUPEROXIDE dismutase ,SYMPTOMS - Abstract
Schizophrenia is a severe and chronic mental illness usually diagnosed in adolescents and young adults. Many studies indicate that oxidative stress causes membrane dysfunction and cell damage, which is implicated in the pathophysiology of schizophrenia. The purpose of our study was to evaluate oxidative stress markers (the main primary products of lipid peroxidation, lipid hydroperoxides (LOOH), and end products of lipid peroxidation, malondialdehyde (MDA), superoxide dismutase (SOD), glutathione (GSH), and Ferric Reducing Ability of Plasma (FRAP)) in the plasma of patients with the first episode of schizophrenia in drug-naïve patients (22 men and 12 women aged 17–29). The control group (Ctrl) comprised 26 healthy subjects (19 men and 7 women, aged 18–30 years). The Positive and Negative Syndrome Scale (PANSS) was applied to evaluate psychotic symptoms. Analyses of the oxidative stress variables revealed an increased level of SOD (U/mL) in subjects with schizophrenia versus control group. In addition, lipid damage measured as LOOHs µ (mol/L) and MDA was significantly higher in patients with schizophrenia in comparison to control subjects. There was a positive correlation between MDA µmol/L and PANSS P and a positive correlation between C-reactive protein (CRP) and the PANSS P scale. The elevated level of superoxide dismutase in patients with the first episode of schizophrenia can be explained by compensatory mechanisms to counteract oxidative stress. Malondialdehyde can be used as a simple biomarker of low-grade systemic inflammation associated with oxidative stress. A positive correlation between CRP and PANSS P scale and MDA and PANSS P scale may indicate a significant relationship between the development of low-grade inflammation and damage associated with oxidative stress in the development of the first symptoms of schizophrenia. [ABSTRACT FROM AUTHOR]
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- 2022
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24. PD-L1/miR-155 Interplay in Pediatric High-Grade Glioma.
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Litak, Jakub, Grajkowska, Wiesława, Bogucki, Jacek, Kowalczyk, Paweł, Petniak, Alicja, Podkowiński, Arkadiusz, Szumiło, Justyna, Kocki, Janusz, Roliński, Jacek, Rahnama-Hezavah, Mansur, Roszkowski, Marcin, and Grochowski, Cezary
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BRAIN tumors ,GLIOMAS ,CHILD patients ,HOSPITAL care of children ,PROGRAMMED death-ligand 1 ,GLIOBLASTOMA multiforme - Abstract
High-grade pediatric glioma (p-HGG—WHO 2021, formerly GBM—WHO 2016), as a common, aggressive, and highly lethal primary brain malignancy in adults, accounts for only 3–15% of primary brain tumors in pediatric patients. After leukemia, brain malignancies are the second most common in the pediatric population and first in incidences concerning solid tumors. This study was designed on the basis of 14 pediatric patients hospitalized at Children's Memorial Health Institute in Warsaw, Poland, due to p-HGG treatment. All the patients had a histopathological diagnosis performed by an experienced neuropathologist according to WHO guidelines (WHO 2016 Grade IV Glioblastoma). A significant correlation was found between the miR-155 concentration and the level of PD-L1 expression in p-HGG tumor tissue. Very few reports have indicated PD-L1 expression in pediatric patients. [ABSTRACT FROM AUTHOR]
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- 2022
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25. Analysis of Different Types of Resection for Pediatric Patients with Temporal Lobe Epilepsy
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Clusmann, Hans, Kral, Thomas, Gleissner, Ulrike, Sassen, Robert, Urbach, Horst, Blümcke, Ingmar, Bogucki, Jacek, and Schramm, Johannes
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- 2004
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26. Influence of the Treatment Used in Inflammatory Bowel Disease on the Protease Activities.
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Dudzińska, Ewa, Strachecka, Aneta, Gil-Kulik, Paulina, Kocki, Janusz, Bogucki, Jacek, Shemedyuk, Natalya, and Gryzinska, Magdalena
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INFLAMMATORY bowel diseases ,DISEASE remission ,CROHN'S disease ,AZATHIOPRINE ,VEDOLIZUMAB ,ULCERATIVE colitis ,DISEASE exacerbation ,GELATIN - Abstract
Introduction: There is growing evidence that intestinal proteases have a role in the pathogenesis of gastrointestinal inflammatory diseases. Inflammatory bowel disease (IBD), which includes Crohn's disease (CD) and ulcerative colitis (UC), has an additional source of proteases represented by infiltrated and activated inflammatory cells. The aim of our study was to determine proteolytic system activity in patients with CD and UC. We limited the number of proteases tested by determining proteases active in acidic, neutral and alkaline pH. Materials and Methods: The study included 40 patients with IBD – 20 CD patients and 20 UC patients. The control group consisted of 20 healthy subjects. Among the 20 CD patients, 17 were treated with aminosalicylates, 14 with azathioprine, and 4 with corticosteroids, while 8 patients were undergoing biological treatment. Among the 20 UC patients, 19 were treated with aminosalicylates, 8 with azathioprine, and 3 with corticosteroids. The total protein concentration was assayed by the Lowry method. The optimal pH was assayed in pH from 2.2 to 12.8, separated by 0.2 intervals. Proteolytic activities were determined against different substrates (gelatine, haemoglobin, ovalbumin, albumin, cytochrome C, and casein), and haemoglobin was the optimal substrate. Protease activities were determined according to Anson method. Determination of the activities of natural inhibitors of acidic, neutral and alkaline proteases is based on the Lee and Lin method. Results: Decreases were observed in the activities of acid proteases (pH 5), alkaline proteases (pH 7), and neutral proteases (pH 7.6 and 8.6) in the groups of CD patients in remission in comparison with the active phase. In the group of patients with biologically treated CD patients, acid protease activity (pH 5.0) was lower than in CD patients not receiving biological treatment. Activities of neutral (pH 7.0) and alkaline (pH 7.6 and 8.6) proteases in the plasma of patients with UC in remission were lower in comparison to the active phase. Activities of acid (pH 5.0) and alkaline (8.6) protease inhibitors were higher in CD patients in the active phase in comparison to remission. In UC patients with exacerbation of the disease, the activity of alkaline (pH 8.6) protease inhibitors was increased compared to remission. Conclusion: 1. Our research may suggest that the immunomodulatory treatment used in IBD, aimed at reducing the level of leukocytes and reduction of inflammation, may contribute to a reduction in protease activity. 2. The decrease of protease activities in patients with CD and UC in remission may be a marker suggesting the patients' response to the treatment. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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27. Affective computing with eye-tracking data in the study of the visual perception of architectural spaces.
- Author
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Kulisz, M., Szala, M., Badurowicz, M., Cel, W., Chmielewska, M., Czyż, Z., Falkowicz, K., Kujawska, J., Tulwin, T., Chmielewska, Magdalena, Dzieńkowski, Mariusz, Bogucki, Jacek, Kocki, Wojciech, Kwiatkowski, Bartłomiej, Pełka, Jarosław, and Tuszyńska-Bogucka, Wioletta
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- 2019
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28. The effects of interior design on wellness – Eye tracking analysis in determining emotional experience of architectural space. A survey on a group of volunteers from the Lublin Region, Eastern Poland.
- Author
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Tuszyńska-Bogucka, Wioletta, Kwiatkowski, Bartłomiej, Chmielewska, Magdalena, Dzieńkowski, Mariusz, Kocki, Wojciech, Pełka, Jarosław, Przesmycka, Natalia, Bogucki, Jacek, and Galkowski, Dariusz
- Abstract
Introduction and objective. Using the concepts of Ulrich’s theory of supportive design and Malkin’s healing environment, an eye tracking experiment was designed in order to measure respondents’ reactions while looking at visualisations of various interiors, with the aim of verifying whether certain parameters of an interior are related to emotional reactions in terms of positive stimulation, and the sense of security and comfort. Materials and method. 12 boards were designed, incorporating standard features of an interior, i.e. (1) proportions, (2) lighting, (3) colour scheme of a room, as well as (4) the colours and spatial arrangement of furnishings. Respondents’ reactions were recorded with an eye tracker Tobii TX300 and supplemented by self-descriptions of emotional reactions. Results. The results showed that the varying spatial and colour arrangements presented in the interior visualisations provoked different emotional responses, confirmed by pupil reaction parameters, as measured by the eye tracking device. Conclusions. Architectural space can have a diverse emotional significance and impact on an individual’s emotional state. This is an important conclusion from the point of view of optimising and creating the so-called supportive and healing environment. The results have implications for the interpretation of the pupil diameter as an index of emotional reactions to different architectural space visualisations. Testing the eye tracker as a method helpful in diagnosing the emotional reactions to features of the interior is justified, and can provide an effective tool for early diagnosis of the impact of architectural space on the well-being of individuals. It can also be a good form of testing the emotional significance of architectural designs before they are implemented. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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29. Dysregulation of MicroRNA Regulatory Network in Lower Extremities Arterial Disease.
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Bogucka-Kocka, Anna, Zalewski, Daniel P., Ruszel, Karol P., Stępniewski, Andrzej, Gałkowski, Dariusz, Bogucki, Jacek, Komsta, Łukasz, Kołodziej, Przemysław, Zubilewicz, Tomasz, Feldo, Marcin, and Kocki, Janusz
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ARTERIAL diseases ,MICRORNA ,RECEIVER operating characteristic curves ,GENE expression ,NERVOUS system ,LEG - Abstract
Atherosclerosis and its comorbidities are the major contributors to the global burden of death worldwide. Lower extremities arterial disease (LEAD) is a common manifestation of atherosclerotic disease of arteries of lower extremities. MicroRNAs belong to epigenetic factors that regulate gene expression and have not yet been extensively studied in LEAD. We aimed to indicate the most promising microRNA and gene expression signatures of LEAD, to identify interactions between microRNA and genes and to describe potential effect of modulated gene expression. High-throughput sequencing was employed to examine microRNAome and transcriptome of peripheral blood mononuclear cells of patients with LEAD, in relation to controls. Statistical significance of microRNAs and genes analysis results was evaluated using DESeq2 and uninformative variable elimination by partial least squares methods. Altered expression of 26 microRNAs (hsa-let-7f-1-3p, hsa-miR-34a-5p, -122-5p, -3591-3p, -34a-3p, -1261, -21-5p, -15a-5p, -548d-5p, -34b-5p, -424-3p, -548aa, -548t-3p, -4423-3p, -196a-5p, -330-3p, -766-3p, -30e-3p, -125b-5p, -1301-3p, -3184-5p, -423-3p, -339-3p, -138-5p, -99a-3p, and -6087) and 14 genes (AK5 , CD248 , CDS2 , FAM129A , FBLN2 , GGT1 , NOG , NRCAM , PDE7A , RP11-545E17.3 , SLC12A2 , SLC16A10 , SLC4A10 , and ZSCAN18) were the most significantly differentially expressed in LEAD group compared to controls. Discriminative value of revealed microRNAs and genes were confirmed by receiver operating characteristic analysis. Dysregulations of 26 microRNAs and 14 genes were used to propose novel biomarkers of LEAD. Regulatory interactions between biomarker microRNAs and genes were studied in silico using R multiMiR package. Functional analysis of genes modulated by proposed biomarker microRNAs was performed using DAVID 6.8 tools and revealed terms closely related to atherosclerosis and, interestingly, the processes involving nervous system. The study provides new insight into microRNA-dependent regulatory mechanisms involved in pathology of LEAD. Proposed microRNA and gene biomarkers of LEAD may provide new diagnostic and therapeutic opportunities. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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30. Dysregulation of Autophagy, Mitophagy, and Apoptosis Genes in the CA3 Region of the Hippocampus in the Ischemic Model of Alzheimer's Disease in the Rat.
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Ułamek-Kozioł, Marzena, Czuczwar, Stanisław J., Kocki, Janusz, Januszewski, Sławomir, Bogucki, Jacek, Bogucka-Kocka, Anna, and Pluta, Ryszard
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ALZHEIMER'S disease ,RAT diseases ,HIPPOCAMPUS (Brain) ,CEREBRAL ischemia ,REVERSE transcriptase ,AUTOPHAGY - Abstract
There is currently no knowledge about the expression profile of the autophagy (BECN1), mitophagy (BNIP3), and apoptosis (CASP3) genes in the CA3 region of the hippocampus after cerebral ischemia. In addition, it is unknown whether genes for BECN1, BNIP3, and CASP3 have any effect on the neuronal death in the CA3 area of the hippocampus due to ischemia. In this study, for the first time, we present, by means of a quantitative PCR protocol with reverse transcriptase, the expression of BECN1 and CASP3 genes in the neuronal CA3 region of the hippocampus with the co-expression of the mitochondrial BNIP3 gene, which genes are associated with Alzheimer's disease, in the ischemic model of Alzheimer's disease in the rat. The present study showed that after ischemia, the CASP3 gene was significantly expressed within 7-30 days, the BECN1 gene was significantly overexpressed on the thirtieth day, and the BINP3 gene was lowered below control values during post-ischemic follow-up period. The caspase-dependent neuronal death in the CA3 region of the hippocampus after ischemia is not accompanied by overexpression of the BNIP3 gene. Our data may therefore suggest a new insight into the BNIP3 gene in the regulation of neuronal mitophagy in neurodegeneration in the CA3 region of the hippocampus after ischemia. This indicates no involvement of the BNIP3 gene along with the CASP3 gene in the CA3 region of the hippocampus in delayed neuronal death after brain ischemia. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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31. Monitoring of endostatin, TNF-a VEGFs, MMP-9, and cathepsin-L during three months of diosmin treatment in patients with chronic venous disease (CVD).
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Feldo, Marcin, Wójciak-Kosior, Magdalena, Sowa, Ireneusz, Kocki, Janusz, Bogucki, Jacek, Zubilewicz, Tomasz, Karakuła, Wacław, and Bogucka-Kocka, Anna
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THERAPEUTICS ,VASCULAR endothelial growth factors ,CHRONICALLY ill ,ENDOSTATIN - Abstract
Introduction: Primary CVD as a result of increased venous hypertension caused mostly by reflux from valvular incompetence as an indication for venoactive drug treatment. The objective of the study was the association between three months of treatment with diosmin and changes to the angiogenic factors involved in the pathophysiology and clinical symptoms of CVD. Material and methods: 41 patients were included in the study. Plasma levels of tumour necrosis factor α (TNF-α), vascular endothelial growth factor (VEGF-A and VEGF-C), matrix metalloproteinase 9 (MMP-9), Cathepsine-L and endostatin were measured using an ELISA assay at baseline and after three months of diosmin administration. Clinical evaluation was performed using duplex Doppler, the VAS scale, leg circumference measurement and BMI score. Results: Three-month treatment with diosmin was associated with a statistically significant decrease in TNF-α, VEGF-A, VEGF-C, MMP-9, Cathepsin-L and endostatin plasma levels with p < 0.01 and p < 0.05 respectively. The average ankle circumference decreased significantly from 30.45 (± 2.05) to 29.0 (± 1.43) (p < 0.05). Conclusion: Diosmin influence on the inflammatory and proteolytic mechanisms involved in the pathology of CVD, could modify endostatin release and angiogenic processes. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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32. Influence of Diosmin Treatment on the Level of Oxidative Stress Markers in Patients with Chronic Venous Insufficiency.
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Feldo, Marcin, Woźniak, Michał, Wójciak-Kosior, Magdalena, Sowa, Ireneusz, Kot-Waśik, Agata, Aszyk, Justyna, Bogucki, Jacek, Zubilewicz, Tomasz, and Bogucka-Kocka, Anna
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- 2018
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33. Modulation of Multidrug Resistance Gene Expression by Coumarin Derivatives in Human Leukemic Cells.
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Kubrak, Tomasz, Bogucka-Kocka, Anna, Komsta, Łukasz, Załuski, Daniel, Bogucki, Jacek, Galkowski, Dariusz, Kaczmarczyk, Robert, Feldo, Marcin, Cioch, Maria, and Kocki, Janusz
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- 2017
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34. Dysregulation of Autophagy, Mitophagy, and Apoptotic Genes in the Medial Temporal Lobe Cortex in an Ischemic Model of Alzheimer's Disease.
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Ułamek-Kozioł, Marzena, Kocki, Janusz, Bogucka-Kocka, Anna, Petniak, Alicja, Gil-Kulik, Paulina, Januszewski, Sławomir, Bogucki, Jacek, Jabłónski, Mirosław, Furmaga-Jabłónska, Wanda, Brzozowska, Judyta, Czuczwar, Stanisław J., Pluta, Ryszard, Jabłoński, Mirosław, and Furmaga-Jabłońska, Wanda
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BRAIN damage ,APOPTOSIS ,CASPASE inhibitors ,CEREBRAL ischemia ,LABORATORY rats ,PHYSIOLOGY ,PROTEIN metabolism ,AUTOPHAGY ,ALZHEIMER'S disease ,ANIMAL experimentation ,CARDIAC arrest ,GENE expression ,MEMBRANE proteins ,MITOCHONDRIA ,POLYMERASE chain reaction ,RATS ,TEMPORAL lobe ,TIME ,DISEASE progression - Abstract
Ischemic brain damage is a pathological incident that is often linked with medial temporal lobe cortex injury and finally its atrophy. Post-ischemic brain injury associates with poor prognosis since neurons of selectively vulnerable ischemic brain areas are disappearing by apoptotic program of neuronal death. Autophagy has been considered, after brain ischemia, as a guardian against neurodegeneration. Consequently, we have examined changes in autophagy (BECN 1), mitophagy (BNIP 3), and apoptotic (caspase 3) genes in the medial temporal lobe cortex with the use of quantitative reverse-transcriptase PCR following transient 10-min global brain ischemia in rats with survival 2, 7, and 30 days. The intense significant overexpression of BECN 1 gene was noted on the 2nd day, while on days 7-30 the expression of this gene was still upregulated. BNIP 3 gene was downregulated on the 2nd day, but on days 7-30 post-ischemia, there was a significant reverse tendency. Caspase 3 gene, associated with apoptotic neuronal death, was induced in the same way as BNIP 3 gene after brain ischemia. Thus, the demonstrated changes indicate that the considerable dysregulation of expression of BECN 1, BNIP 3, and caspase 3 genes may be connected with a response of neuronal cells in medial temporal lobe cortex to transient complete brain ischemia. [ABSTRACT FROM AUTHOR]
- Published
- 2016
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35. Discrepancy in Expression of β-Secretase and Amyloid-β Protein Precursor in Alzheimer-Related Genes in the Rat Medial Temporal Lobe Cortex Following Transient Global Brain Ischemia.
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Pluta, Ryszard, Kocki, Janusz, Uɫamek-Kozioɫ, Marzena, Petniak, Alicja, Gil-Kulik, Paulina, Januszewski, Sɫlawomir, Bogucki, Jacek, JabÛoński, Mirosɫaw, Brzozowska, Judyta, Furmaga-Jabɫońska, Wanda, Bogucka-Kocka, Anna, Czuczwar, Stanisɫaw J., Ułamek-Kozioł, Marzena, Januszewski, Sławomir, Jabłoński, Mirosław, Furmaga-Jabłońska, Wanda, and Czuczwar, Stanisław J
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GENE expression ,SECRETASES ,AMYLOID genetics ,PROTEIN precursors ,TEMPORAL lobe ,CEREBRAL ischemia - Abstract
Brain ischemia may be causally related with Alzheimer's disease. Presumably, β-secretase and amyloid-β protein precursor gene expression changes may be associated with Alzheimer's disease neuropathology. Consequently, we have examined quantitative changes in both β-secretase and amyloid-β protein precursor genes in the medial temporal lobe cortex with the use of quantitative rtPCR analysis following 10-min global brain ischemia in rats with survival of 2, 7, and 30 days. The greatest significant overexpression of β-secretase gene was noted on the 2nd day, while on days 7-30 the expression of this gene was only modestly downregulated. Amyloid-β protein precursor gene was downregulated on the 2nd day, but on days 7-30 postischemia, there was a significant reverse tendency. Thus, the demonstrated alterations indicate that the considerable changes of expression of β-secretase and amyloid-β protein precursor genes may be connected with a response of neurons in medial temporal lobe cortex to transient global brain ischemia. Finally, the ischemia-induced gene changes may play a key role in a late and slow onset of Alzheimer-type pathology. [ABSTRACT FROM AUTHOR]
- Published
- 2016
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36. Dysregulation of Amyloid-β Protein Precursor, β-Secretase, Presenilin 1 and 2 Genes in the Rat Selectively Vulnerable CA1 Subfield of Hippocampus Following Transient Global Brain Ischemia.
- Author
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Kocki, Janusz, Ułamek-Kozioł, Marzena, Bogucka-Kocka, Anna, Januszewski, Sławomir, Jabłoński, Mirosław, Gil-Kulik, Paulina, Brzozowska, Judyta, Petniak, Alicja, Furmaga-Jabłońska, Wanda, Bogucki, Jacek, Czuczwar, Stanisław J, and Pluta, Ryszard
- Abstract
The interaction between brain ischemia and Alzheimer's disease (AD) has been intensively investigated recently. Nevertheless, we have not yet understood the nature and mechanisms of the ischemic episodes triggering the onset of AD and how they influence its slow progression. The assumed connection between brain ischemia and the accumulation of amyloid-β (Aβ) peptide awaits to be clearly explained. In our research, we employed a rat cardiac arrest model to study the changes in gene expression of amyloid-β protein precursor (AβPP) and its cleaving enzymes, β- and γ-secretases (including presenilins) in hippocampal CA1 sector, following transient 10-min global brain ischemia. The quantitative reverse-transcriptase PCR assay demonstrated that the expression of all above genes that contribute to Aβ peptide generation was dysregulated during 30 days in postischemic hippocampal CA1 area. It suggests that studied Aβ peptide generation-related genes can be involved in AβPP metabolism, following global brain ischemia and will be useful to identify the molecular mechanisms underpinning that cerebral ischemia might be an etiological cause of AD via dysregulation of AβPP and its cleaving enzymes, β- and γ-secretases genes, and subsequently, it may increase Aβ peptide production and promote the gradual and slow development of AD neuropathology. Our data demonstrate that brain ischemia activates delayed neuronal death in hippocampus in an AβPP-dependent manner, thus defining a new and important mode of ischemic cell death. [ABSTRACT FROM AUTHOR]
- Published
- 2015
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37. Cide-A Gene Expression in Patients with Obesity Qualified for Endovascular Treatment of Abdominal Aorta Aneurysm.
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Feldo, Marcin, Kocki, Janusz, Feldo, Jan, Łukasik, Sylwia, Bogucki, Jacek, Skwarzyński, Adam, Wroński, Jacek, Kęsik, Jan, and Zubilewicz, Tomasz
- Subjects
GENE expression ,OVERWEIGHT persons ,OBESITY ,AORTIC aneurysms ,ABDOMINAL aorta - Abstract
CIDE-A gene and the genes of LRP group play a key role in the regulation of the body weight and lipid metabolism in mammals. CIDE-A is defined as a potential human obesity gene and the LRP1 gene is associated with the development of abdominal aortic aneurysm (AAA). The aim of the study was to define the role of CIDE-A gene in patients with dyslipidemia and asymptomatic AAA. Material and methods. The study group consisted of 38 subjects, including 27 men and 11 women qualified for endovascular aneurysm repair (EVAR). The subjects with abdominal aortic aneurysm were enrolled in the study group, depending on the body mass index (BMI); in obese patients (BMI > 30). The control group (n = 16) included subjects without lipid disorders. One-step isolation of RNA from lymphocytes and adipose tissue cells was performed using the modified TRI method by Chomc-zynski and Sacchi, and then the gene expression was tested by real-time PCR. Results. The highest mean relative of the gene expression for CIDE-A was reported in subjects with the normal body weight. The lowest mean relative of the gene expression for CIDE-A was observed in the group of obese patients with aortic aneurysm and lipid disorders. A high negative correlation (r = -0.7101) in the gene expression for CIDE-A was observed in the group of obese patients with aortic aneurysm, depending on the BMI. Conclusions. Due to the important role of the CIDE-A gene and Cide-A protein in the development of metabolic syndrome, obesity and the accompanying vascular lesions such as abdominal aortic an-eurysm, seen in this context, the tested gene and protein Cide-A represent a potential therapeutic target in these diseases. [ABSTRACT FROM AUTHOR]
- Published
- 2015
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38. Cide-A Gene Expression in Patients with Obesity Qualified for Endovascular Treatment of Abdominal Aorta Aneurysm.
- Author
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Feldo, Marcin, Kocki, Janusz, Feldo, Jan, Łukasik, Sylwia, Bogucki, Jacek, Skwarzyński, Adam, Wroński, Jacek, Kęsik, Jan, and Zubilewicz, Tomasz
- Subjects
GENE expression ,LIPID metabolism ,BODY weight ,AORTIC aneurysms ,ADIPOSE tissues - Abstract
CIDE-A gene and the genes of LRP group play a key role in the regulation of the body weight and lipid metabolism in mammals. CIDE-A is defined as a potential human obesity gene and the LRP1 gene is associated with the development of abdominal aortic aneurysm (AAA). The aim of the study was to define the role of CIDE-A gene in patients with dyslipidemia and asymptomatic AAA. Material and methods. The study group consisted of 38 subjects, including 27 men and 11 women qualified for endovascular aneurysm repair (EVAR). The subjects with abdominal aortic aneurysm were enrolled in the study group, depending on the body mass index (BMI); in obese patients (BMI > 30). The control group (n = 16) included subjects without lipid disorders. One-step isolation of RNA from lymphocytes and adipose tissue cells was performed using the modified TRI method by Chomc-zynski and Sacchi, and then the gene expression was tested by real-time PCR. Results. The highest mean relative of the gene expression for CIDE-A was reported in subjects with the normal body weight. The lowest mean relative of the gene expression for CIDE-A was observed in the group of obese patients with aortic aneurysm and lipid disorders. A high negative correlation (r = -0.7101) in the gene expression for CIDE-A was observed in the group of obese patients with aortic aneurysm, depending on the BMI. Conclusions. Due to the important role of the CIDE-A gene and Cide-A protein in the development of metabolic syndrome, obesity and the accompanying vascular lesions such as abdominal aortic an-eurysm, seen in this context, the tested gene and protein Cide-A represent a potential therapeutic target in these diseases. [ABSTRACT FROM AUTHOR]
- Published
- 2014
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39. Possible application of the eye tracking technique in parasitological diagnostics.
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Kołodziej, Przemysław, Tuszyńska-Bogucka, Wioletta, Dzieńkowski, Mariusz, Bogucki, Jacek, Kocki, Janusz, Milosz, Marek, and Bogucka-Kocka, Anna
- Published
- 2022
40. CIDE-A gene expression in patients with abdominal obesity and LDL hyperlipoproteinemia qualified for surgical revascularization in chronic limb ischemia.
- Author
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Feldo, Marcin, Kocki, Janusz, Łukasik, Sylwia, Bogucki, Jacek, Feldo, Jan, Terlecki, Piotr, Kęsik, Jan, Wroński, Jacek, and Zubilewicz, Tomasz
- Subjects
GENE expression ,MOLECULAR genetics ,DEVELOPMENTAL stability (Genetics) ,ABDOMEN ,OBESITY - Abstract
According to the latest data, CIDE -A gene plays a key role in the regulation of body weight in both humans and mice, and therefore it is regarded a potential candidate gene for human obesity. The aim of the study was to define the role of CIDEA gene in patients with dyslipidemia and symptomatic limb ischemia. Material and methods. The study group contained 28 patients, including 17 men and 11 women. Patients were enrolled in the study group, depending on the value of body mass index (BMI); there was BMI>30 for obese patients. The group included untreated patients (n=14) and patients (n=14) receiving atorvastatin 20 mg/day for at least three months prior to the initiation of the study. The control group (n=16) contained patients with no lipid disorders. A one-step isolation of RNA from lymphocytes and adipose tissue cells was carried out using the TRI method modified by Chomczyński and Sacchi. Next, gene expression was tested using real-time PCR. Results. The highest mean relative expression of CIDE -A gene occurred in patients with normal body weight. The lowest mean relative expression of CIDE-A gene was observed in obese patients with lipid disorders. A high negative correlation (r=-0.7919) of CIDE -A gene expression, depending on BMI, was reported in the group of obese patients with lipid disorders. Conclusions. Due to an important role of Cide-A protein demonstrated in the development of metabolic diseases such as obesity, metabolic syndrome, type 2 diabetes and their vascular complications, CIDE -A gene and protein are potential therapeutic targets in the case of these diseases. [ABSTRACT FROM AUTHOR]
- Published
- 2013
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41. Giant cell glioblastoma with unique bilateral cerebellopontine angle localization considered as extraaxial tumor growth in a patient with neurofibromatosis Type 1.
- Author
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Taraszewska, Anna, Bogucki, Jacek, Powala, Agnieszka, and Matyja, Ewa
- Published
- 2013
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42. Chronic Alcohol Abuse Alters Hepatic Trace Element Concentrations-Metallomic Study of Hepatic Elemental Composition by Means of ICP-OES.
- Author
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Baj, Jacek, Teresiński, Grzegorz, Forma, Alicja, Flieger, Michał, Proch, Jędrzej, Niedzielski, Przemysław, Grochowski, Cezary, Blicharska, Eliza, Buszewicz, Grzegorz, Bogucki, Jacek, Majerek, Dariusz, Karakuła, Kaja, Czeczelewski, Marcin, and Flieger, Jolanta
- Abstract
Trace element accumulation varies in different human tissues. Distribution of several elements was found to be disrupted in the case of excessive alcohol consumption, causing negative effects and exacerbation of pathological processes in the liver. In this study, we analyzed the levels and interactions between seven trace elements including calcium (Ca), cobalt (Co), chromium (Cr), copper (Cu), iron (Fe), potassium (K), and magnesium (Mg), manganese (Mn), sodium (Na), zinc (Zn), and selenium (Se) in individuals with alcohol-use disorder (AUD) and patients without AUD (control group). The liver samples were collected during autopsy from 39 individuals with AUD and 45 control subjects. Elemental composition inductively coupled plasma optical emission spectrometry (ICP-OES) after wet mineralization by nitric acid was applied for the evaluation of the samples. Positive correlations dominated in the AUD group, mainly in relation to Mg, which strongly positively correlated with Ca, Mn, Fe; K correlated with Mn and Zn, and Cu positively correlated with K and Zn. The strongest positive correlation in the AUD group was observed for the Mg-Mn pair (r = 0.87). Significant statistical differences (p < 0.05) between the groups concerned the average concentration of Co, Cu, Mn, and Mg, which were lower in the AUD group, and Fe, the level of which was significantly higher in the AUD group compared to the control group. Evaluation of the chronic alcohol consumption effect on the accumulation of trace elements in the liver allows a better understanding of the pathological processes taking place in this organ. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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43. How Do Polish Students Manage Emotional Distress during the COVID-19 Lockdown? A Web-Based Cross-Sectional Study.
- Author
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Sitarz, Elżbieta, Forma, Alicja, Karakuła, Kaja, Juchnowicz, Dariusz, Baj, Jacek, Bogucki, Jacek, and Karakuła-Juchnowicz, Hanna
- Subjects
PSYCHOLOGICAL distress ,COVID-19 ,STAY-at-home orders ,COVID-19 pandemic ,LONELINESS ,PSYCHOLOGICAL adaptation - Abstract
Choices regarding coping strategies during the COVID-19 pandemic outbreak may imply the development as well as the severity of emotional disorders. The aim of this web-based cross-sectional study was to: (1) assess the coping strategies for stress in a population of Polish students and (2) evaluate the impact of those strategies on the severity of depression, stress, and anxiety symptoms during the COVID-19 lockdown. To evaluate emotional distress, we used the DASS-21 scale and coping strategies Brief-COPE Inventory. The study included 2172 respondents (73% female, 27% male) with a mean age of 22.1 ± 2.2. Students more frequently chose stress coping strategies belonging to the 'approach' coping strategies (M = 29.60 ± 6.89) compared to 'avoidant' coping strategies (M = 22.82 ± 5.78). The intensification of distress in women caused a turn to religion (p = 0.001), while men used substances (p < 0.001) and a sense of humor (p < 0.001). Medical students coped best with emotional distress, which is very encouraging for their future profession. The highest level of DASS total score was associated with the usage of avoidant coping strategies, prior use of psychiatric or psychological support, and loneliness. Planning interventions to prevent emotional disorders in students requires the identification of factors contributing to increased emotional distress. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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44. Correlations between selected physiological factors of horses, considering the patern of their use, and the incidence of gastrointestinal nematodes.
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Studzińska, Maria Bernadeta, Tomczuk, Krzysztof, Demkowska-Kutrzepa, Marta, Bogucki, Jacek, Roczeń-Karczmarz, Monika, and Szczepaniak, Klaudiusz
- Published
- 2019
45. Eye Tracking—An Innovative Tool in Medical Parasitology.
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Kołodziej, Przemysław, Tuszyńska-Bogucka, Wioletta, Dzieńkowski, Mariusz, Bogucki, Jacek, Kocki, Janusz, Milosz, Marek, Kocki, Marcin, Reszka, Patrycja, Kocki, Wojciech, and Bogucka-Kocka, Anna
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EYE tracking ,MEDICAL parasitology ,EYE movements ,TEACHING aids ,CLINICAL pathology - Abstract
The innovative Eye Movement Modelling Examples (EMMEs) method can be used in medicine as an educational training tool for the assessment and verification of students and professionals. Our work was intended to analyse the possibility of using eye tracking tools to verify the skills and training of people engaged in laboratory medicine on the example of parasitological diagnostics. Professionally active laboratory diagnosticians working in a multi-profile laboratory (non-parasitological) (n = 16), laboratory diagnosticians no longer working in this profession (n = 10), and medical analyst students (n = 56), participated in the study. The studied group analysed microscopic images of parasitological preparations made with the cellSens Dimension Software (Olympus) system. Eye activity parameters were obtained using a stationary, video-based eye tracker Tobii TX300 which has a 3-ms temporal resolution. Eye movement activity parameters were analysed along with time parameters. The results of our studies have shown that the eye tracking method is a valuable tool for the analysis of parasitological preparations. Detailed quantitative and qualitative analysis confirmed that the EMMEs method may facilitate learning of the correct microscopic image scanning path. The analysis of the results of our studies allows us to conclude that the EMMEs method may be a valuable tool in the preparation of teaching materials in virtual microscopy. These teaching materials generated with the use of eye tracking, prepared by experienced professionals in the field of laboratory medicine, can be used during various training, simulations and courses in medical parasitology and contribute to the verification of education results, professional skills, and elimination of errors in parasitological diagnostics. [ABSTRACT FROM AUTHOR]
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- 2021
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46. Alzheimer's Disease Associated Presenilin 1 and 2 Genes Dysregulation in Neonatal Lymphocytes Following Perinatal Asphyxia.
- Author
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Tarkowska, Agata, Furmaga-Jabłońska, Wanda, Bogucki, Jacek, Kocki, Janusz, Pluta, Ryszard, and Baud, Olivier
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ASPHYXIA neonatorum ,AMYLOID beta-protein precursor ,ALZHEIMER'S disease ,HYPOXIA-inducible factor 1 ,LYMPHOCYTES ,HYPOXIA-inducible factors - Abstract
Perinatal asphyxia is mainly a brain disease leading to the development of neurodegeneration, in which a number of peripheral lesions have been identified; however, little is known about the expression of key genes involved in amyloid production by peripheral cells, such as lymphocytes, during the development of hypoxic-ischemic encephalopathy. We analyzed the gene expression of the amyloid protein precursor, β-secretase, presenilin 1 and 2 and hypoxia-inducible factor 1-α by RT-PCR in the lymphocytes of post-asphyxia and control neonates. In all examined periods after asphyxia, decreased expression of the genes of the amyloid protein precursor, β-secretase and hypoxia-inducible factor 1-α was noted in lymphocytes. Conversely, expression of presenilin 1 and 2 genes decreased on days 1–7 and 8–14 but increased after survival for more than 15 days. We believe that the expression of presenilin genes in lymphocytes could be a potential biomarker to determine the severity of the post-asphyxia neurodegeneration or to identify the underlying factors for brain neurodegeneration and get information about the time they occurred. This appears to be the first worldwide data on the role of the presenilin 1 and 2 genes associated with Alzheimer's disease in the dysregulation of neonatal lymphocytes after perinatal asphyxia. [ABSTRACT FROM AUTHOR]
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- 2021
- Full Text
- View/download PDF
47. The Outbreak of SARS-CoV-2 Pandemic and the Well-Being of Polish Students: The Risk Factors of the Emotional Distress during COVID-19 Lockdown.
- Author
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Juchnowicz, Dariusz, Baj, Jacek, Forma, Alicja, Karakuła, Kaja, Sitarz, Elżbieta, Bogucki, Jacek, Karakula-Juchnowicz, Hanna, Roccella, Michele, and Mancini, Giacomo
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COVID-19 pandemic ,PSYCHOLOGICAL distress ,COVID-19 ,STAY-at-home orders ,PSYCHOTHERAPY ,LONELINESS - Abstract
The coronavirus disease 2019 (COVID-19) pandemic has a significant impact on both physical and mental health. The aim of this cross-sectional study was to (1) evaluate depression, anxiety, and stress levels among students from Polish universities during the first weeks of the COVID-19 pandemic and (2) assess the risk factors of the higher intensity of emotional distress. We conducted an online survey using the Depression, Anxiety, and Stress Scale-21 (DASS-21) to assess well-being. The study included 2172 respondents (73% female, 27% male) with a mean age of 22.1 ± 2.2. Moderate to extremely severe scores of depression, anxiety, and stress were reported by 43.4%, 27.3%, and 41.0% of the respondents, respectively. Higher scores of DASS-21 were related to female sex (odds ratio (OR) = 3.01), studying sciences (OR = 2.04), co-residence with the roommates (OR = 1.25), suffering from a mental disorder (OR = 5.88), loneliness (OR = 293.30), the usage of psychiatric support before pandemic (OR = 8.06), poor economic situation (OR = 13.49), and the lower scores were found for being currently employed (OR = 0.4). This study highlights an urgent need for (1) crisis-oriented psychological and psychiatric support for students during the outbreak of the COVID-19 pandemic and (2) preparing appropriate psychological interventions to improve the mental health of students for a possible similar situation in the future. [ABSTRACT FROM AUTHOR]
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- 2021
- Full Text
- View/download PDF
48. The Correlation of Mutations and Expressions of Genes within the PI3K/Akt/mTOR Pathway in Breast Cancer—A Preliminary Study.
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Kołodziej, Przemysław, Nicoś, Marcin, Krawczyk, Paweł A., Bogucki, Jacek, Karczmarczyk, Agnieszka, Zalewski, Daniel, Kubrak, Tomasz, Kołodziej, Elżbieta, Makuch-Kocka, Anna, Madej-Czerwonka, Barbara, Płachno, Bartosz J., Kocki, Janusz, Bogucka-Kocka, Anna, and Pakdel, Farzad
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GENE expression ,BREAST cancer ,GENETIC mutation ,BRCA genes ,GENES - Abstract
There is an urgent need to seek new molecular biomarkers helpful in diagnosing and treating breast cancer. In this elaboration, we performed a molecular analysis of mutations and expression of genes within the PI3K/Akt/mTOR pathway in patients with ductal breast cancer of various malignancy levels. We recognized significant correlations between the expression levels of the studied genes. We also performed a bioinformatics analysis of the data available on the international database TCGA and compared them with our own research. Studies on mutations and expression of genes were conducted using High-Resolution Melt PCR (HRM-PCR), Allele-Specific-quantitative PCR (ASP-qPCR), Real-Time PCR molecular methods in a group of women with ductal breast cancer. Bioinformatics analysis was carried out using web source Ualcan and bc-GenExMiner. In the studied group of women, it was observed that the prevalence of mutations in the studied PIK3CA and AKT1 genes was 29.63%. It was stated that the average expression level of the PIK3CA, PIK3R1, PTEN genes in the group of breast cancer patients is lower in comparison to the control group, while the average expression level of the AKT1 and mTOR genes in the studied group was higher in comparison to the control group. It was also indicated that in the group of patients with mutations in the area of the PIK3CA and AKT1 genes, the PIK3CA gene expression level is statistically significantly lower than in the group without mutations. According to our knowledge, we demonstrate, for the first time, that there is a very strong positive correlation between the levels of AKT1 and mTOR gene expression in the case of patients with mutations and without mutations. [ABSTRACT FROM AUTHOR]
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- 2021
- Full Text
- View/download PDF
49. The BIRC Family Genes Expression in Patients with Triple Negative Breast Cancer.
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Makuch-Kocka, Anna, Kocki, Janusz, Brzozowska, Anna, Bogucki, Jacek, Kołodziej, Przemysław, Płachno, Bartosz J., Bogucka-Kocka, Anna, and Hamar, Peter
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TRIPLE-negative breast cancer ,BREAST cancer prognosis ,GENE expression ,GENE families ,BRCA genes ,GENES - Abstract
The BIRC (baculoviral IAP repeat-containing; BIRC) family genes encode for Inhibitor of Apoptosis (IAP) proteins. The dysregulation of the expression levels of the genes in question in cancer tissue as compared to normal tissue suggests that the apoptosis process in cancer cells was disturbed, which may be associated with the development and chemoresistance of triple negative breast cancer (TNBC). In our study, we determined the expression level of eight genes from the BIRC family using the Real-Time PCR method in patients with TNBC and compared the obtained results with clinical data. Additionally, using bioinformatics tools (Ualcan and The Breast Cancer Gene-Expression Miner v4.5 (bc-GenExMiner v4.5)), we compared our data with the data in the Cancer Genome Atlas (TCGA) database. We observed diverse expression pattern among the studied genes in breast cancer tissue. Comparing the expression level of the studied genes with the clinical data, we found that in patients diagnosed with breast cancer under the age of 50, the expression levels of all studied genes were higher compared to patients diagnosed after the age of 50. We observed that in patients with invasion of neoplastic cells into lymphatic vessels and fat tissue, the expression levels of BIRC family genes were lower compared to patients in whom these features were not noted. Statistically significant differences in gene expression were also noted in patients classified into three groups depending on the basis of the Scarff-Bloom and Richardson (SBR) Grading System. [ABSTRACT FROM AUTHOR]
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- 2021
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50. Fractalkine, sICAM-1 and Kynurenine Pathway in Restrictive Anorexia Nervosa–Exploratory Study.
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Dudzińska, Ewa, Szymona, Kinga, Kloc, Renata, Kocki, Tomasz, Gil-Kulik, Paulina, Bogucki, Jacek, Kocki, Janusz, Paduch, Roman, and Urbańska, Ewa M.
- Abstract
The link between the kynurenine pathway and immunomodulatory molecules—fractalkine and soluble intercellular adhesion molecule-1 (sICAM-1)—in anorexia nervosa (AN) remains unknown. Fractalkine, sICAM-1, tryptophan (TRP), kynurenine (KYN), neuroprotective kynurenic acid (KYNA), neurotoxic 3-OH-kynurenine (3-OH-KYN), and the expression of mRNA for kynurenine aminotransferases (KAT1-3) were studied in 20 female patients with restrictive AN (mostly drug-free, all during first episode of the disease) and in 24 controls. In AN, serum fractalkine, but not sICAM-1, KYNA, KYN, TRP or 3-OH-KYN, was higher; ratios TRP/KYN, KYN/KYNA, KYN/3-OH-KYN and KYNA/3-OH-KYN were unaltered. The expression of the gene encoding KAT3, but not of genes encoding KAT1 and KAT2 (measured in blood mononuclear cells), was higher in patients with AN. In AN, fractalkine positively correlated with TRP, while sICAM-1 was negatively associated with 3-OH-KYN and positively linked with the ratio KYN/3-OH-KYN. Furthermore, TRP and fractalkine were negatively associated with the body mass index (BMI) in AN. Expression of KAT1, KAT2 and KAT3 did not correlate with fractalkine, sICAM-1 or BMI, either in AN or control. Increased fractalkine may be an independent factor associated with the restrictive type of AN. Excessive physical activity probably underlies increased expression of KAT3 observed among enrolled patients. Further, longitudinal studies on a larger cohort of patients should be aimed to clarify the contribution of fractalkine and KAT3 to the pathogenesis of AN. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
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