37 results on '"Alshamrani, Saleh A."'
Search Results
2. The key role of the Lectin Pathway enzyme MASP-3 in the innate immune protection against Neisseria meningitides
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Alshamrani, Saleh, Schwaeble, Wilhelm, and Andrew, Peter
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616.9 - Abstract
Neisseria meningitidis infections pose a worldwide threat to human health being a major cause of morbidity and mortality. The bacterium can often be found to live as a commensal organism in the upper respiratory-tract. However, under disease promoting circumstances it may cause invasive infections such as bacterial meningitis with a mortality rate of up to 10% in patients with sepsis. The complement system plays a vital role in immune protection from Neisseria meningitidis infections and ongoing research in our laboratories has recently observed that the serum of mice deficient in the lectin pathway of complement effector enzyme MASP-2 had a higher bactericidal activity towards Neisseria meningitidis as compared to MASP-2 sufficient serum. This work also revealed a key role of the lectin pathway components MBL and MASP-3 in driving serum bacteriolytic activity against Neisseria meningitidis and has identified a novel link between MASP-3 and the alternative pathway of complement activation. The work described in this thesis highlights the critical role that MASP-3 plays in the innate immune response to this pathogen using in vitro models of serum bactericidal activity and in vivo mouse models of Neisseria meningitidis infection. The failure of MASP-3 deficient non immune serum to lyse Neisseria meningitidis serotype A and serotype B was restored by adding a recombinant enzymatically active MASP-3 fragment to this serum while the therapeutic systemic injection of recombinant murine MASP-3 zymogen convincingly restored the defective alternative pathway functional activity and with that repaired the high susceptibility of MASP-1/3 deficient mice to Neisseria meningitidis infections. In line with the essential role that the alternative pathway plays in driving the innate immune response against Neisseria meningitidis, the early results of my study showed the therapeutic utility of enhancing the alternative pathway functional activity through the addition of recombinant murine properdin to WT mice sera and significantly increased the lytic activity against Neisseria meningitidis.
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- 2016
3. Low salinity water and CO2 miscible flooding in Berea and Bentheimer sandstones
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AlQuraishi, Abdulrahman A., Amao, Abiodun Matthew, Al-Zahrani, Nawaf Ibrahim, AlQarni, Mohammed T., and AlShamrani, Saleh A.
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- 2019
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4. Immunomodulatory Effect of Bacillus licheniformis Against the Aflatoxins Induced Molecular Pathological Changes in Rat Model.
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Alkhalil, Samia S., Al-Sarraj, Faisal, Aloufi, Abeer S., Mohammedsaleh, Zuhair M., Moawadh, Mamdoh S., Saleh, Fayez M., Al-Zahrani, Majid, Aggad, Waheeb, Alghamdi, Youssef S., Mashraqi, Mutaib M., Alshamrani, Saleh, and Soliman, Mona H.
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Aflatoxicosis is one of the major issues for the public health. Control of aflatoxins is necessary to avoid the health hazards in human and animals. Present study was designed to evaluate the efficacy of Bacillus licheniformis as a novel feed additive for control of aflatoxicosis. A total of 40 rats were equally divided into the four groups. The first group (BD) was kept as control, treated with basal diet. In second group (AF), the rats were treated with aflatoxins (28 μg/kg BW). In the third group (AFBL) the rats were treated with aflatoxins (28 µg/g BW) and Bacillus licheniformis (1 × 10
8 cfu/mL). In the fourth group (BDBL) the rats were treated with only Bacillus licheniformis (1 × 108 cfu/mL). The parameters studied were, phagocytic response by carbon clearance assay system, lymphoproliferative response to PHA-P, antibody response to SRBCs, total antioxidant capacity and total oxidant status of the rats and interleukin concentrations, along with histopathology of organs. Results of this study confirmed the immunomodulation and antioxidant capacity of Bacillus licheniformis against 28 µg/kg BW of aflatoxins. [ABSTRACT FROM AUTHOR]- Published
- 2024
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5. Variolin B from sea sponge against lung cancer: a multitargeted molecular docking with fingerprinting and molecular dynamics simulation study.
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Alsalmi, Ohud, Mashraqi, Mutaib M., Alshamrani, Saleh, Almasoudi, Hassan H., Alharthi, Afaf Awwadh, and Gharib, Amal F.
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- 2024
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6. Subtractive sequence-mediated therapeutic targets from the conserved gene clusters of Campylobacter hyointestinalis and computational inhibition assessment.
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Basharat, Zarrin, Alghamdi, Youssef Saeed, Mashraqi, Mutaib M., Makkawi, Mohammed, Alasmari, Sultan, and Alshamrani, Saleh
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- 2024
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7. Investigation of anti-nociceptive, anti-inflammatory potential and ADMET studies of pure compounds isolated from Isodon rugosus Wall. ex Benth.
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Alshehri, Osama M., Zeb, Anwar, Mukarram Shah, Syed Muhammad, Mahnashi, Mater H., Asiri, Saeed Ahmed, Alqahtani, Omaish, Sadiq, Abdul, Ibrar, Muhammad, Alshamrani, Saleh, and Jan, Muhammad Saeed
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ADRENERGIC receptors ,OPIOID receptors ,BIOACTIVE compounds ,COLUMN chromatography ,ABDOMINAL pain ,PAIN management ,H2 receptor antagonists - Abstract
The strong ethnopharmacological utilization of Isodon rugosus Wall. Ex. Benth is evident in the treatment of several types of pain and inflammation, including toothache, earache, abdominal pain, gastric pain, and generalized body pain and inflammation. Based on this background, the antinociceptive effects of the crude extract, various fractions, and essential oil have been reported previously. In this research work, we isolate and characterize pure bioactive compounds from I. rugosus and evaluate possible mechanisms using various in vivo and in vitro models. The pure compounds were analyzed for analgesic and anti-inflammatory activities through various assays. The column chromatography of the chloroform fraction of I. rugosus led to the identification of two pure compounds, i.e., 1 and 2. Compound 1 demonstrated notable inhibition (62% writhing inhibition, 72.77% COX-2 inhibition, and 76.97% 5-LOX inhibition) and anti-inflammatory potential (>50% paw edema inhibition at various intervals). The possible mechanism involved in antinociception was considered primarily, a concept that has already been elucidated through the application of naloxone (an antagonist of opioid receptors). The involvement of adrenergic receptors was investigated using a hot plate model (an adrenergic receptor antagonist). The strong ethnomedicinal analgesic background of I. rugosus, supported by previous reports and current observations, leads to the conclusion that I. rugosus is a potential source of antinociceptive and anti-inflammatory bioactive compounds. It may be concluded from the results that the isolated analgesic compounds of I. rugosus may be a possible alternative remedy for pain and inflammation management with admirable efficacy and safety profiles. [ABSTRACT FROM AUTHOR]
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- 2024
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8. Investigation of Zika virus methyl transferase inhibitors using steered molecular dynamics.
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Rabaan, Ali A., AlShehail, Bashayer M., Halwani, Muhammad A., Alshengeti, Amer, Najim, Mustafa A., Garout, Mohammed, Bajunaid, Huda A., Alshamrani, Saleh A., Al Fares, Mona A., Alissa, Mohammed, and Alwashmi, Ameen S. S.
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- 2024
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9. Structure-Based In Silico Approaches Reveal IRESSA as a Multitargeted Breast Cancer Regulatory, Signalling, and Receptor Protein Inhibitor.
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Almasoudi, Hassan Hussain, Mashraqi, Mutaib M., Alshamrani, Saleh A., Alharthi, Afaf Awwadh, Alsalmi, Ohud, Nahari, Mohammed H., Al-Mansour, Fares Saeed H., and Alhazmi, Abdulfattah Yahya M.
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BREAST ,GEFITINIB ,PROTEIN receptors ,BREAST cancer ,CANCER stem cells ,P-glycoprotein ,ELECTRON density - Abstract
Breast cancer begins in the breast cells, mainly impacting women. It starts in the cells that line the milk ducts or lobules responsible for producing milk and can spread to nearby tissues and other body parts. In 2020, around 2.3 million women across the globe received a diagnosis, with an estimated 685,000 deaths. Additionally, 7.8 million women were living with breast cancer, making it the fifth leading cause of cancer-related deaths among women. The mutational changes, overexpression of drug efflux pumps, activation of alternative signalling pathways, tumour microenvironment, and cancer stem cells are causing higher levels of drug resistance, and one of the major solutions is to identify multitargeted drugs. In our research, we conducted a comprehensive screening using HTVS, SP, and XP, followed by an MM/GBSA computation of human-approved drugs targeting HER2/neu, BRCA1, PIK3CA, and ESR1. Our analysis pinpointed IRESSA (Gefitinib-DB00317) as a multitargeted inhibitor for these proteins, revealing docking scores ranging from −4.527 to −8.809 Kcal/mol and MM/GBSA scores between −49.09 and −61.74 Kcal/mol. We selected interacting residues as fingerprints, pinpointing 8LEU, 6VAL, 6LYS, 6ASN, 5ILE, and 5GLU as the most prevalent in interactions. Subsequently, we analysed the ADMET properties and compared them with the standard values of QikProp. We extended our study for DFT computations with Jaguar and plotted the electrostatic potential, HOMO and LUMO regions, and electron density, followed by a molecular dynamics simulation for 100 ns in water, showing an utterly stable performance, making it a suitable drug candidate. IRESSA is FDA-approved for lung cancer, which shares some pathways with breast cancers, clearing the hurdles of multitargeted drugs against breast and lung cancer. This has the potential to be groundbreaking; however, more studies are needed to concreate IRESSA's role. [ABSTRACT FROM AUTHOR]
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- 2024
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10. Molecular screening reveals Variolin B as a multitargeted inhibitor of lung cancer: a molecular docking-based fingerprinting and molecular dynamics simulation study.
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Almasoudi, Hassan H., Mashraqi, Mutaib M., Alshamrani, Saleh, Alsalmi, Ohud, Alharthi, Afaf Awwadh, and Gharib, Amal F.
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- 2024
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11. Low-dose recombinant properdin provides substantial protection against Streptococcus pneumoniae and Neisseria meningitidis infection
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Ali, Youssif Mohammed, Hayat, Azam, Saeed, Bayad Mawlood, Haleem, Kashif S., Alshamrani, Saleh, Kenawy, Hany I., Ferreira, Viviana P., Saggu, Gurpanna, Buchberger, Anna, Lachmann, Peter J., Sim, Robert B., Goundis, Dimitrios, Andrew, Peter W., Lyncha, Nicholas J., and Schwaeble, Wilhelm J.
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- 2014
12. Application of CRISPR-Cas System to Mitigate Superbug Infections.
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Rabaan, Ali A., Al Fares, Mona A., Almaghaslah, Manar, Alpakistany, Tariq, Al Kaabi, Nawal A., Alshamrani, Saleh A., Alshehri, Ahmad A., Almazni, Ibrahim Abdullah, Saif, Ahmed, Hakami, Abdulrahim R., Khamis, Faryal, Alfaresi, Mubarak, Alsalem, Zainab, Alsoliabi, Zainab A., Al Amri, Kawthar Amur Salim, Hassoueh, Amal K., Mohapatra, Ranjan K., Arteaga-Livias, Kovy, and Alissa, Mohammed
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CRISPRS ,BASE pairs ,DRUG resistance in bacteria ,GENOME editing ,MULTIDRUG resistance ,BACTERIAL wilt diseases - Abstract
Multidrug resistance in bacterial strains known as superbugs is estimated to cause fatal infections worldwide. Migration and urbanization have resulted in overcrowding and inadequate sanitation, contributing to a high risk of superbug infections within and between different communities. The CRISPR-Cas system, mainly type II, has been projected as a robust tool to precisely edit drug-resistant bacterial genomes to combat antibiotic-resistant bacterial strains effectively. To entirely opt for its potential, advanced development in the CRISPR-Cas system is needed to reduce toxicity and promote efficacy in gene-editing applications. This might involve base-editing techniques used to produce point mutations. These methods employ designed Cas9 variations, such as the adenine base editor (ABE) and the cytidine base editor (CBE), to directly edit single base pairs without causing DSBs. The CBE and ABE could change a target base pair into a different one (for example, G-C to A-T or C-G to A-T). In this review, we addressed the limitations of the CRISPR/Cas system and explored strategies for circumventing these limitations by applying diverse base-editing techniques. Furthermore, we also discussed recent research showcasing the ability of base editors to eliminate drug-resistant microbes. [ABSTRACT FROM AUTHOR]
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- 2023
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13. Mining Autoimmune-Disorder-Linked Molecular-Mimicry Candidates in Clostridioides difficile and Prospects of Mimic-Based Vaccine Design: An In Silico Approach.
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Alshamrani, Saleh, Mashraqi, Mutaib M., Alzamami, Ahmad, Alturki, Norah A., Almasoudi, Hassan H., Alshahrani, Mohammed Abdulrahman, and Basharat, Zarrin
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CLOSTRIDIOIDES difficile ,MOLECULAR mimicry ,AUTOIMMUNE diseases ,ALZHEIMER'S disease ,BACTERIAL diseases - Abstract
Molecular mimicry, a phenomenon in which microbial or environmental antigens resemble host antigens, has been proposed as a potential trigger for autoimmune responses. In this study, we employed a bioinformatics approach to investigate the role of molecular mimicry in Clostridioides difficile-caused infections and the induction of autoimmune disorders due to this phenomenon. Comparing proteomes of host and pathogen, we identified 23 proteins that exhibited significant sequence homology and were linked to autoimmune disorders. The disorders included rheumatoid arthritis, psoriasis, Alzheimer's disease, etc., while infections included viral and bacterial infections like HIV, HCV, and tuberculosis. The structure of the homologous proteins was superposed, and RMSD was calculated to find the maximum deviation, while accounting for rigid and flexible regions. Two sequence mimics (antigenic, non-allergenic, and immunogenic) of ≥10 amino acids from these proteins were used to design a vaccine construct to explore the possibility of eliciting an immune response. Docking analysis of the top vaccine construct C2 showed favorable interactions with HLA and TLR-4 receptor, indicating potential efficacy. The B-cell and T-helper cell activity was also simulated, showing promising results for effective immunization against C. difficile infections. This study highlights the potential of C. difficile to trigger autoimmunity through molecular mimicry and vaccine design based on sequence mimics that trigger a defensive response. [ABSTRACT FROM AUTHOR]
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- 2023
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14. Unveiling the multitargeted potential of N-(4-Aminobutanoyl)-S-(4-methoxybenzyl)-L-cysteinylglycine (NSL-CG) against SARS CoV-2: a virtual screening and molecular dynamics simulation study.
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Alghamdi, Youssef Saeed, Mashraqi, Mutaib M., Alzamami, Ahmad, Alturki, Norah A., Ahmad, Shaban, Alharthi, Afaf Awwadh, Alshamrani, Saleh, and Asiri, Saeed A.
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- 2023
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15. Molecular Mimicry Mapping in Streptococcus pneumoniae : Cues for Autoimmune Disorders and Implications for Immune Defense Activation.
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Mashraqi, Mutaib M., Alzamami, Ahmad, Alturki, Norah A., Alshamrani, Saleh, Alshahrani, Mousa M., Almasoudi, Hassan H., and Basharat, Zarrin
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AUTOIMMUNE diseases ,MOLECULAR mimicry ,STREPTOCOCCUS pneumoniae ,GENE mapping ,HLA histocompatibility antigens ,PNEUMOCOCCAL pneumonia - Abstract
Streptococcus pneumoniae contributes to a range of infections, including meningitis, pneumonia, otitis media, and sepsis. Infections by this bacterium have been associated with the phenomenon of molecular mimicry, which, in turn, may contribute to the induction of autoimmunity. In this study, we utilized a bioinformatics approach to investigate the potential for S. pneumoniae to incite autoimmunity via molecular mimicry. We identified 13 S. pneumoniae proteins that have significant sequence similarity to human proteins, with 11 of them linked to autoimmune disorders such as psoriasis, rheumatoid arthritis, and diabetes. Using in silico tools, we predicted the sequence as well as the structural homology among these proteins. Database mining was conducted to establish links between these proteins and autoimmune disorders. The antigenic, non-allergenic, and immunogenic sequence mimics were employed to design and validate an immune response via vaccine construct design. Mimic-based vaccine construct can prove effective for immunization against the S. pneumoniae infections. Immune response simulation and binding affinity was assessed through the docking of construct C8 to human leukocyte antigen (HLA) molecules and TLR4 receptor, with promising results. Additionally, these mimics were mapped as conserved regions on their respective proteins, suggesting their functional importance in S. pneumoniae pathogenesis. This study highlights the potential for S. pneumoniae to trigger autoimmunity via molecular mimicry and the possibility of vaccine design using these mimics for triggering defense response. [ABSTRACT FROM AUTHOR]
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- 2023
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16. Regulatory T Cells (Tregs) and COVID-19: Unveiling the Mechanisms, and Therapeutic Potentialities with a Special Focus on Long COVID.
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Dhawan, Manish, Rabaan, Ali A., Alwarthan, Sara, Alhajri, Mashael, Halwani, Muhammad A., Alshengeti, Amer, Najim, Mustafa A., Alwashmi, Ameen S. S., Alshehri, Ahmad A., Alshamrani, Saleh A., AlShehail, Bashayer M., Garout, Mohammed, Al-Abdulhadi, Saleh, Al-Ahmed, Shamsah H., Thakur, Nanamika, and Verma, Geetika
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POST-acute COVID-19 syndrome ,REGULATORY T cells ,COVID-19 ,CORONAVIRUS diseases ,ADULT respiratory distress syndrome ,T cells - Abstract
The COVID-19 pandemic has caused havoc all around the world. The causative agent of COVID-19 is the novel form of the coronavirus (CoV) named SARS-CoV-2, which results in immune system disruption, increased inflammation, and acute respiratory distress syndrome (ARDS). T cells have been important components of the immune system, which decide the fate of the COVID-19 disease. Recent studies have reported an important subset of T cells known as regulatory T cells (Tregs), which possess immunosuppressive and immunoregulatory properties and play a crucial role in the prognosis of COVID-19 disease. Recent studies have shown that COVID-19 patients have considerably fewer Tregs than the general population. Such a decrement may have an impact on COVID-19 patients in a number of ways, including diminishing the effect of inflammatory inhibition, creating an inequality in the Treg/Th17 percentage, and raising the chance of respiratory failure. Having fewer Tregs may enhance the likelihood of long COVID development in addition to contributing to the disease's poor prognosis. Additionally, tissue-resident Tregs provide tissue repair in addition to immunosuppressive and immunoregulatory activities, which may aid in the recovery of COVID-19 patients. The severity of the illness is also linked to abnormalities in the Tregs' phenotype, such as reduced expression of FoxP3 and other immunosuppressive cytokines, including IL-10 and TGF-beta. Hence, in this review, we summarize the immunosuppressive mechanisms and their possible roles in the prognosis of COVID-19 disease. Furthermore, the perturbations in Tregs have been associated with disease severity. The roles of Tregs are also explained in the long COVID. This review also discusses the potential therapeutic roles of Tregs in the management of patients with COVID-19. [ABSTRACT FROM AUTHOR]
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- 2023
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17. Updated Insights into the T Cell-Mediated Immune Response against SARS-CoV-2: A Step towards Efficient and Reliable Vaccines.
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Dhawan, Manish, Rabaan, Ali A., Fawarah, Mahmoud M. Al, Almuthree, Souad A., Alsubki, Roua A., Alfaraj, Amal H., Mashraqi, Mutaib M., Alshamrani, Saleh A., Abduljabbar, Wesam A., Alwashmi, Ameen S. S., Ibrahim, Fatimah Al, Alsaleh, Abdulmonem A., Khamis, Faryal, Alsalman, Jameela, Sharma, Manish, and Emran, Talha Bin
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IMMUNE response ,T-cell exhaustion ,SARS-CoV-2 ,ADULT respiratory distress syndrome ,COVID-19 - Abstract
The emergence of novel variants of SARS-CoV-2 and their abilities to evade the immune response elicited through presently available vaccination makes it essential to recognize the mechanisms through which SARS-CoV-2 interacts with the human immune response. It is essential not only to comprehend the infection mechanism of SARS-CoV-2 but also for the generation of effective and reliable vaccines against COVID-19. The effectiveness of the vaccine is supported by the adaptive immune response, which mainly consists of B and T cells, which play a critical role in deciding the prognosis of the COVID-19 disease. T cells are essential for reducing the viral load and containing the infection. A plethora of viral proteins can be recognized by T cells and provide a broad range of protection, especially amid the emergence of novel variants of SARS-CoV-2. However, the hyperactivation of the effector T cells and reduced number of lymphocytes have been found to be the key characteristics of the severe disease. Notably, excessive T cell activation may cause acute respiratory distress syndrome (ARDS) by producing unwarranted and excessive amounts of cytokines and chemokines. Nevertheless, it is still unknown how T-cell-mediated immune responses function in determining the prognosis of SARS-CoV-2 infection. Additionally, it is unknown how the functional perturbations in the T cells lead to the severe form of the disease and to reduced protection not only against SARS-CoV-2 but many other viral infections. Hence, an updated review has been developed to understand the involvement of T cells in the infection mechanism, which in turn determines the prognosis of the disease. Importantly, we have also focused on the T cells' exhaustion under certain conditions and how these functional perturbations can be modulated for an effective immune response against SARS-CoV-2. Additionally, a range of therapeutic strategies has been discussed that can elevate the T cell-mediated immune response either directly or indirectly. [ABSTRACT FROM AUTHOR]
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- 2023
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18. Omics Approaches in Drug Development against Leishmaniasis: Current Scenario and Future Prospects.
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Rabaan, Ali A., Bakhrebah, Muhammed A., Mohapatra, Ranjan K., Farahat, Ramadan Abdelmoez, Dhawan, Manish, Alwarthan, Sara, Aljeldah, Mohammed, Al Shammari, Basim R., Al-Najjar, Amal H., Alhusayyen, Mona A., Al-Absi, Ghadeer H., Aldawood, Yahya, Alsaleh, Abdulmonem A., Alshamrani, Saleh A., Almuthree, Souad A., Alawfi, Abdulsalam, Alshengeti, Amer, Alwashmi, Ameen S. S., Hajissa, Khalid, and Nassar, Majed S.
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LEISHMANIASIS ,DRUG development ,DRUG discovery ,ZOONOSES ,DRUG target ,PHARMACOGENOMICS - Abstract
Leishmaniasis is a zoonotic disease transmitted in humans by the bite of Leishmania-infected phlebotomine sandflies. Each year approximately 58,500 cases of leishmaniasis are diagnosed across the globe, with a mortality rate of nearly seven percent. There are over 20 parasitic strains of Leishmania which are known to cause distinct types of leishmaniasis and pose an endemic threat to humans worldwide. Therefore, it is crucial to develop potential medications and vaccines to combat leishmaniasis. However, the task of developing therapeutic solutions is challenging due to Leishmania's digenetic lifecycle. The challenge is further intensified by cases of resistance against the available drugs. Owing to these challenges, the conventional drug development regimen is further limited by target discovery and ligand suitability for the targets. On the other hand, as an added advantage, the emergence of omics-based tools, such as high-end proteomics, transcriptomics and genomics, has hastened the pace of target discovery and target-based drug development. It is now becoming apparent that multi-omics convergence and an inter-connected systems approach is less time-consuming and more cost-effective for any drug-development process. This comprehensive review is an attempt to summarize the current knowledge on the muti-omics approach in drug development against leishmaniasis. In particular, it elaborates the potential target identification from secreted proteins in various stages of Leishmania infection and also illustrates the convergence of transcriptomic and genomic data towards the collective goal of drug discovery. This review also provides an understanding of the potential parasite's drug targets and drug resistance characteristics of the parasite, which can be used in designing effective and specific therapeutics. [ABSTRACT FROM AUTHOR]
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- 2023
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19. Recent Trends and Developments in Multifunctional Nanoparticles for Cancer Theranostics.
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Rabaan, Ali A., Bukhamsin, Rehab, AlSaihati, Hajir, Alshamrani, Saleh A., AlSihati, Jehad, Al-Afghani, Hani M., Alsubki, Roua A., Abuzaid, Abdulmonem A., Al-Abdulhadi, Saleh, Aldawood, Yahya, Alsaleh, Abdulmonem A., Alhashem, Yousef N., Almatouq, Jenan A., Emran, Talha Bin, Al-Ahmed, Shamsah H., Nainu, Firzan, and Mohapatra, Ranjan K.
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COMPANION diagnostics ,NANOPARTICLES ,TREATMENT effectiveness ,CANCER treatment ,SURFACE chemistry - Abstract
Conventional anticancer treatments, such as radiotherapy and chemotherapy, have significantly improved cancer therapy. Nevertheless, the existing traditional anticancer treatments have been reported to cause serious side effects and resistance to cancer and even to severely affect the quality of life of cancer survivors, which indicates the utmost urgency to develop effective and safe anticancer treatments. As the primary focus of cancer nanotheranostics, nanomaterials with unique surface chemistry and shape have been investigated for integrating cancer diagnostics with treatment techniques, including guiding a prompt diagnosis, precise imaging, treatment with an effective dose, and real-time supervision of therapeutic efficacy. Several theranostic nanosystems have been explored for cancer diagnosis and treatment in the past decade. However, metal-based nanotheranostics continue to be the most common types of nonentities. Consequently, the present review covers the physical characteristics of effective metallic, functionalized, and hybrid nanotheranostic systems. The scope of coverage also includes the clinical advantages and limitations of cancer nanotheranostics. In light of these viewpoints, future research directions exploring the robustness and clinical viability of cancer nanotheranostics through various strategies to enhance the biocompatibility of theranostic nanoparticles are summarised. [ABSTRACT FROM AUTHOR]
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- 2022
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20. Phytochemical Analysis, Total Phenolic, Flavonoid Contents, and Anticancer Evaluations of Solvent Extracts and Saponins of H. digitata.
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Alshehri, Osama M., Alshamrani, Saleh, Mahnashi, Mater H., Alshahrani, Mohammed Merae, Khan, Jalwa Ali, Shah, Muhammad, Alshehri, Mohammed Ali, Zafar, Rehman, Zahoor, Muhammad, Jan, Muhammad Saeed, Hassan, Syed Shams ul, and Sadiq, Abdul
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PHENOL analysis , *MEDICINAL plants , *FLAVONOIDS , *NEOVASCULARIZATION inhibitors , *CLINICAL drug trials , *GLYCOSIDES , *ANTINEOPLASTIC agents , *PHYTOCHEMICALS , *CELL proliferation , *DESCRIPTIVE statistics , *PLANT extracts , *MOLECULAR structure , *TUMORS ,TUMOR prevention - Abstract
Cancer is one of the most challenging diseases in the modern era for the researchers and investigators. Extensive research worldwide is underway to find novel therapeutics for prevention and treatment of diseases. The extracted natural sources have shown to be one of the best and effective treatments for cell proliferation and angiogenesis. Different approaches including disc potato model, brine shrimp, and chorioallantoic membrane (CAM) assay were adopted to analyze the anticancer effects. Habenaria digitata was also evaluated for MTT activity against NIH/3T3 cell line. The dexamethasone, etoposide, and vincristine sulfate were used as a positive control in these assays. All of the extracts including crude extracts (Hd.Cr), saponin (Hd.Sp), n-hexane (Hd.Hx), chloroform (Hd.Chf), ethyl acetate (Hd.EA), and aqueous fraction (Hd.Aq) were shown excellent results by using various assays. For example, saponin and chloroform have displayed decent antitumor and angiogenic activity by using potato tumor assay. The saponin fraction and chloroform were shown to be the most efficient in potato tumor experiment, demonstrating 87.5 and 93.7% tumor suppression at concentration of 1000 μg/ml, respectively, with IC50 values of 25.5 and 18.3 μg/ml. Additionally, the two samples, chloroform and saponins, outperformed the rest of the test samples in terms of antiangiogenic activity, with IC50 28.63 μg/ml and 16.20 μg/ml, respectively. In characterizing all solvent fractions, the chloroform (Hd.Chf) and saponin (Hd.Sp) appeared to display good effectiveness against tumor and angiogenesis but very minimal activity against A. tumefaciens. The Hd.Chf and Hd.Sp have been prospective candidates in the isolation of natural products with antineoplastic properties. [ABSTRACT FROM AUTHOR]
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- 2022
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21. Immune and Oxidative Response against Sonicated Antigen of Mycoplasma capricolum subspecies capripneumonia —A Causative Agent of Contagious Caprine Pleuropneumonia.
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Haq, Rather Izhar Ul, Parray, Oveas Rafiq, Nazir, Qurat Ul Ain, Bhat, Riyaz Ahmed, Shah, Showkat Ahmad, Kawoosa, Majid Shafi, Rabaan, Ali A., Aljeldah, Mohammed, Al Shammari, Basim R., Almogbel, Mohammed S., Alharbi, Nada, Alrashoudi, Reem, Sabour, Amal A., Alaeq, Rana A., Alshiekheid, Maha A., Alshamrani, Saleh A., Albutti, Aqel, Alwashmi, Ameen S.S., Dhama, Kuldeep, and Yatoo, Mohd. Iqbal
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TITERS ,ACTINOBACILLUS pleuropneumoniae ,ACTINOBACILLUS ,MYCOPLASMA diseases ,HUMORAL immunity ,IMMUNE response ,MYCOPLASMA ,ANTIBODY titer - Abstract
Vaccines are vital for prevention and control of mycoplasma diseases. The exploration of a vaccine candidate for the development of a vaccine is imperative. The present study envisages the evaluation of immune and oxidative response against an adjuvanted, sonicated antigen of Mycoplasma capricolum subsp. capripneumonia in male Angora rabbits (1 year old, 2 kg) divided in four groups, each having six animals. Group 1 was the healthy control and received 1 mL PBS via subcutaneous route. Group 2 was administered 1 mL of saponin-adjuvanted and -sonicated antigen, Group 3 was given 1 mL of montanide ISA 50-adjuvanted and-sonicated antigen, and Group 4 was given 1 mL of standard vaccine via subcutaneous route. Animals were evaluated for cellular and humoral immune response and oxidative parameters at 0, 7, 14, 21, and 28 days of the study. Total leukocytic, neutrophilic, and basophilic counts showed a significant (p < 0.05) increase in vaccinated groups compared to the healthy group on most of the intervals. TNF-α levels were significantly (p < 0.05) higher in the Group 2 than the Group 1 at all the time intervals and more comparable to Group 4 than Group 3. IL-10 levels were significantly (p < 0.05) higher in vaccinated groups compared to the healthy group on days 14, 21, and 28, but were lower in Group 3 than in Group 2 and Group 4. More hypersensitivity as inflammation and histopathological cellular infiltration in the ear was produced in Group 2 and Group 4 than in Group 3. IgG levels were significantly (p < 0.05) higher in Group 2 and Group 4 than in Group 3 on days 14 and 21. Antibody titers were comparatively higher in Group 4, followed by Group 2 and 3, than Group 1. Significantly (p < 0.05) higher oxidant and lower antioxidant values were noted in Group 2 and 4 compared to Group 3 and Group 1 on most of the intervals. The TLC and antibody titer showed increasing trend throughout the trial, whereas TNF-α, IgG, L, M and E started decreasing from day 14, and IL-10, N and B started decreasing from day 21. This study concludes that the saponin-adjuvanted and-sonicated antigen induces comparatively higher immune response than montanide but is associated with oxidative and inflammatory reactions. [ABSTRACT FROM AUTHOR]
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- 2022
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22. Biological Evaluation, Phytochemical Screening, and Fabrication of Indigofera linifolia Leaves Extract-Loaded Nanoparticles.
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Talha, Muhammad, Islam, Noor Ul, Zahoor, Muhammad, Sadiq, Abdul, Nawaz, Asif, Khan, Farhat Ali, Gulfam, Naila, Alshamrani, Saleh A., Nahari, Mohammed H., Alshahrani, Mohammed Abdulrahman, Mahnashi, Mater H., and Hassan, Syed Shams ul
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INDIGOFERA ,FREE radicals ,NANOPARTICLES ,LOCUST bean gum ,ALPHA-glucosidases ,ANTIBACTERIAL agents - Abstract
Indigofera linifolia is a medicinally important plant, and by virtue of its rich phytochemical composition, this plant is widely used as essential component in traditional medication systems. Due to its wide range of medicinal applications, the extract-loaded chitosan (Ext+Ch), extract-loaded PEG (Ext+PEG), and extract-loaded locust bean gum (Ext+LGB) nanoparticles (NPs) were prepared in the present study. The prepared NPs were then evaluated for their antibacterial, antioxidant, and antidiabetic potentials. Antibacterial activities of the crude extract and the synthesized NPs were performed following standard procedures reported in the literature. The antioxidant capabilities of extract and NPs were evaluated using DPPH free radical scavenging assay. The antidiabetic potential of the samples was evaluated against α-amylase and α-glucosidase. Ext+PEG NPs showed more potent antibacterial activity against the selected strains of bacteria with the highest activity against Escherichia coli. The lowest antibacterial potential was observed for Ext+LGB NPs. The Ext+LGB NPs IC
50 value of 39 μg/mL was found to be the most potent inhibitor of DPPH free radicals. Ext+LGB NPs showed a greater extent of inhibition against α-glucosidase and α-amylase with an IC50 of 83 and 78 μg/mL, whereas for the standard acarbose the IC50 values recorded against the mentioned enzymes were 69 and 74 μg/mL, respectively. A high concentration of phenolics and flavonoids in the crude extract was confirmed through TPC and TFC tests, HPLC profiling, and GC–MS analysis. It was considered that the observed antibacterial, antidiabetic, and antioxidant potential might be due the presence of these phenolics and flavonoids detected. The plant could thus be considered as a potential candidate to be used as a remedy of the mentioned health complications. However, further research in this regard is needed to isolate the exact responsible compounds of the observed biological potentials exhibited by the crude extract. Further, toxicity and pharmacological evaluations in animal models are also needed to establish the safety or toxicity profile of the plant. [ABSTRACT FROM AUTHOR]- Published
- 2022
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23. In-Silico Screening and Molecular Dynamics Simulation of Drug Bank Experimental Compounds against SARS-CoV-2.
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Alturki, Norah A., Mashraqi, Mutaib M., Alzamami, Ahmad, Alghamdi, Youssef S., Alharthi, Afaf A., Asiri, Saeed A., Ahmad, Shaban, and Alshamrani, Saleh
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MOLECULAR dynamics ,SARS-CoV-2 ,VACCINE effectiveness ,RNA replicase ,SMALL molecules - Abstract
For the last few years, the world has been going through a difficult time, and the reason behind this is severe acute respiratory syndrome-coronavirus-2 (SARS-CoV-2), one of the significant members of the Coronaviridae family. The major research groups have shifted their focus towards finding a vaccine and drugs against SARS-CoV-2 to reduce the infection rate and save the life of human beings. Even the WHO has permitted using certain vaccines for an emergency attempt to cut the infection curve down. However, the virus has a great sense of mutation, and the vaccine's effectiveness remains questionable. No natural medicine is available at the community level to cure the patients for now. In this study, we have screened the vast library of experimental drugs of Drug Bank with Schrodinger's maestro by using three algorithms: high-throughput virtual screening (HTVS), standard precision, and extra precise docking followed by Molecular Mechanics/Generalized Born Surface Area (MMGBSA). We have identified 3-(7-diaminomethyl-naphthalen-2-YL)-propionic acid ethyl ester and Thymidine-5′-thiophosphate as potent inhibitors against the SARS-CoV-2, and both drugs performed impeccably and showed stability during the 100 ns molecular dynamics simulation. Both of the drugs are among the category of small molecules and have an acceptable range of ADME properties. They can be used after their validation in in-vitro and in-vivo conditions. [ABSTRACT FROM AUTHOR]
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- 2022
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24. Systematic Review on Pathophysiological Complications in Severe COVID-19 among the Non-Vaccinated and Vaccinated Population.
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Rabaan, Ali A., Bakhrebah, Muhammed A., Mutair, Abbas Al, Alhumaid, Saad, Al-Jishi, Jumana M., AlSihati, Jehad, Albayat, Hawra, Alsheheri, Ahmed, Aljeldah, Mohammed, Garout, Mohammed, Alfouzan, Wadha A., Alhashem, Yousef N., AlBahrani, Salma, Alshamrani, Saleh A., Alotaibi, Sultan, AlRamadhan, Abdullah A., Albasha, Hanadi N., Hajissa, Khalid, and Temsah, Mohamad-Hani
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MULTISYSTEM inflammatory syndrome ,VACCINATION ,MULTIPLE organ failure ,COVID-19 ,OLDER people - Abstract
COVID-19, caused by SARS-CoV-2, is one of the longest viral pandemics in the history of mankind, which have caused millions of deaths globally and induced severe deformities in the survivals. For instance, fibrosis and cavities in the infected lungs of COVID-19 are some of the complications observed in infected patients post COVID-19 recovery. These health abnormalities, including is multiple organ failure—the most striking pathological features of COVID-19—have been linked with diverse distribution of ACE2 receptor. Additionally, several health complications reports were reported after administration of COVID-19 vaccines in healthy individuals, but clinical or molecular pathways causing such complications are not yet studied in detail. Thus, the present systematic review established the comparison of health complication noted in vaccinated and non-vaccinated individuals (COVID-19 infected patients) to identify the association between vaccination and the multiorgan failure based on the data obtained from case studies, research articles, clinical trials/Cohort based studies and review articles published between 2020–2022. This review also includes the biological rationale behind the COVID-19 infection and its subsequent symptoms and effects including multiorgan failure. In addition, multisystem inflammatory syndrome (MIS) has been informed in individuals post vaccination that resulted in multiorgan failure but, no direct correlation of vaccination with MIS has been established. Similarly, hemophagocytic lymphohistiocytosis (HLH) also noted to cause multiorgan failure in some individuals following full vaccination. Furthermore, severe complications were recorded in elderly patients (+40 years of age), indicates that older age individuals are higher risk by COVID-19 and post vaccination, but available literature is not sufficient to comply with any conclusive statements on relationship between vaccination and multiorgan failure. [ABSTRACT FROM AUTHOR]
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- 2022
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25. Suspected Adenovirus Causing an Emerging HEPATITIS among Children below 10 Years: A Review.
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Rabaan, Ali A., Bakhrebah, Muhammed A., Nassar, Majed S., Natto, Zuhair S., Al Mutair, Abbas, Alhumaid, Saad, Aljeldah, Mohammed, Garout, Mohammed, Alfouzan, Wadha A., Alshahrani, Fatimah S., Sulaiman, Tarek, AlFonaisan, Meshal K., Alfaresi, Mubarak, Alshamrani, Saleh A., Nainu, Firzan, Yong, Shin Jie, Choudhary, Om Prakash, and Ahmed, Naveed
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LIVER failure ,HEPATITIS ,COVID-19 vaccines ,LIVER enzymes ,ABDOMINAL pain ,ADENOVIRUSES - Abstract
In October 2021, a case of acute hepatic failure without any known cause was identified in the United States of America. Upon further investigation, other children aged 1–6 years were reported to have the same liver failure, and some of them were positive for adenovirus 41 type F. On 21 April 2022, the Centers for Disease Control and Prevention (CDC) released an alert after 74 cases were identified in United Kingdom (UK) between 5 and 8 April in children below 10 years of age, some of whom were also found to be positive for SARS-CoV-2. All the patients showed symptoms such as vomiting, diarrhea, jaundice, and abdominal pain. The patients' liver enzymes were remarkably increased. A total of 650 cases had been reported from 33 countries as of 27 May 2022, among which 222 cases were reported in the UK alone. No connection with SARS-CoV-2 or its vaccine has been found so far. However, the suspected cause is adenovirus, including its genomic variations, because its pathogenesis and laboratory investigations have been positively linked. Until further evidence emerges, hygiene precautions could be helpful to prevent its spread. [ABSTRACT FROM AUTHOR]
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- 2022
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26. Identification of Therapeutic Targets in an Emerging Gastrointestinal Pathogen Campylobacter ureolyticus and Possible Intervention through Natural Products.
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Khan, Kanwal, Basharat, Zarrin, Jalal, Khurshid, Mashraqi, Mutaib M., Alzamami, Ahmad, Alshamrani, Saleh, and Uddin, Reaz
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NATURAL products ,CAMPYLOBACTER ,GRAM-negative anaerobic bacteria ,DRUG target ,MOLECULAR dynamics ,CAMPYLOBACTER jejuni ,GRAM-negative bacteria - Abstract
Campylobacter ureolyticus is a Gram-negative, anaerobic, non-spore-forming bacteria that causes gastrointestinal infections. Being the most prevalent cause of bacterial enteritis globally, infection by this bacterium is linked with significant morbidity and mortality in children and immunocompromised patients. No information on pan-therapeutic drug targets for this species is available yet. In the current study, a pan-genome analysis was performed on 13 strains of C. ureolyticus to prioritize potent drug targets from the identified core genome. In total, 26 druggable proteins were identified using subtractive genomics. To the best of the authors' knowledge, this is the first report on the mining of drug targets in C. ureolyticus. UDP-3-O-acyl-N-acetylglucosamine deacetylase (LpxC) was selected as a promiscuous pharmacological target for virtual screening of two bacterial-derived natural product libraries, i.e., postbiotics (n = 78) and streptomycin (n = 737) compounds. LpxC inhibitors from the ZINC database (n = 142 compounds) were also studied with reference to LpxC of C. ureolyticus. The top three docked compounds from each library (including ZINC26844580, ZINC13474902, ZINC13474878, Notoginsenoside St-4, Asiaticoside F, Paraherquamide E, Phytoene, Lycopene, and Sparsomycin) were selected based on their binding energies and validated using molecular dynamics simulations. To help identify potential risks associated with the selected compounds, ADMET profiling was also performed and most of the compounds were considered safe. Our findings may serve as baseline information for laboratory studies leading to the discovery of drugs for use against C. ureolyticus infections. [ABSTRACT FROM AUTHOR]
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- 2022
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27. Hemi-Babim and Fenoterol as Potential Inhibitors of MPro and Papain-like Protease against SARS-CoV-2: An In-Silico Study.
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Alzamami, Ahmad, Alturki, Norah A., Alghamdi, Youssef Saeed, Ahmad, Shaban, Alshamrani, Saleh, Asiri, Saeed A., and Mashraqi, Mutaib M.
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SARS-CoV-2 ,ADRENERGIC agonists ,ADRENERGIC receptors ,MOLECULAR dynamics - Abstract
The coronaviruses belong to the Coronaviridae family, and one such member, severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2), is causing significant destruction around the world in the form of a global pandemic. Although vaccines have been developed, their effectiveness and level of protection is still a major concern, even after emergency approval from the World Health Organisation (WHO). At the community level, no natural medicine is currently available as a cure. In this study, we screened the vast library from Drug Bank and identified Hemi-Babim and Fenoterol as agents that can work against SARS-CoV-2. Furthermore, we performed molecular dynamics (MD) simulation for both compounds with their respective proteins, providing evidence that the said drugs can work against the MPro and papain-like protease, which are the main drug targets. Inhibiting the action of these targets may lead to retaining the virus. Fenoterol is a beta-2 adrenergic agonist used for the symptomatic treatment of asthma as a bronchodilator and tocolytic. In this study, Hemi-Babim and Fenoterol showed good docking scores of −7.09 and −7.14, respectively, and performed well in molecular dynamics simulation studies. Re-purposing the above medications has huge potential, as their effects are already well-proven and under public utilisation for asthma-related problems. Hence, after the comprehensive pipeline of molecular docking, MMGBSA, and MD simulation studies, these drugs can be tested in-vivo for further human utilisation. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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28. Assessment of renal function among covid-19 patients admitted to the intensive care unit.
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Makkawi, Mohammed, Alasmari, Sultan, Mashraqi, Mutaib M., Alshamrani, Saleh, Alshehri, Ahmed A., Alqahtani, Saleh, Alqahtani, Mustafa, and Eisa, Nashwa
- Abstract
Severe acute respiratory viral infections are frequently associated with multiple organ failure, including acute kidney damage. The present study aimed to investigate the associated influence of COVID-19 on renal function in patients admitted to the intensive care unit in Asir region, Saudi Arabia. Thirty patients infected with COVID-19 who were referred to the intensive care unit during November and October 2020 at Asir central hospital, Asir region, Saudi Arabia were recruited. The age of patients ranged between 30 and 90 years old. Renal function tests exhibited dramatic changes in the renal biomarkers in patients with COVID-19. Blood urea levels in COVID-19 patients were significantly higher than in the control group. In addition, significantly lower albumin levels with abnormally decreased total protein levels were found in COVID-19 patients. Among the different electrolytes analyzed, a significantly lower calcium level was observed in COVID-19 patients' groups than in the controls. Renal function tests for COVID-19-infected ICU patients revealed significant changes, indicating the major impact of COVID-19 on kidney function. Monitoring renal function tests may assist in the early prognosis of COVID-19 patients. It is, therefore, crucial to increase the understanding of renal function tests in COVID-19 patients who were admitted to the hospital before their condition deteriorated. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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29. Synthesis, in Vitro Antibacterial, and Antitubercular Screening of Some New 4-(1H-pyrrol-1-yl)phenyl benzoates with Docking Studies.
- Author
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Mahnashi, Mater H., Dharwad, Nanda, Kumar, S. R. Prem, Hacholli, Veda B., Shaikh, Ibrahim Ahmed, Alshamrani, Saleh A., and Joshi, Shrinivas D.
- Published
- 2022
30. Low-dose recombinant properdin provides substantial protection against Streptococcus pneumoniae and Neisseria meningitidis infection.
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Youssif Mohammed Ali, Hayat, Azam, Saeed, Bayad Mawlood, Haleem, Kashif S., Alshamrani, Saleh, Kenawy, Hany I., Ferreira, Viviana P., Saggu, Gurpanna, Buchberger, Anna, Lachmann, Peter J., Sim, Robert B., Goundis, Dimitrios, Andrew, Peter W., Lynch, Nicholas J., and Schwaeble, Wilhelm J.
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PROPERDIN factor B ,STREPTOCOCCUS pneumoniae ,NEISSERIA meningitidis ,INFECTION ,IMMUNOTHERAPY - Abstract
Modern medicine has established three central antimicrobial therapeutic concepts: vaccination, antibiotics, and, recently, the use of active immunotherapy to enhance the immune response toward specific pathogens. The efficacy of vaccination and antibiotics is limited by the emergence of new pathogen strains and the increased incidence of antibiotic resistance. To date, immunotherapy development has focused mainly on cytokines. Here we report the successful therapeutic application of a complement component, a recombinant form of properdin (P
n ), with significantly higher activity than native properdin, which promotes complement activation via the alternative pathway, affording protection against N. menigitidis and S. pneumoniae. In a mouse model of infection, we challenged C57BL/6 WT mice with N. menigitidis B-MC58 6 h after i.p. administration of Pn (100 ug/mouse) or buffer alone. Twelve hours later, all control mice showed clear symptoms of infectious disease while the Pn treated group looked healthy. After 16 hours, all control mice developed sepsis and had to be culled, while only 10% of Pn treated mice presented with sepsis and recoverable levels of live Meningococci. In a parallel experiment, mice were challenged intranasally with a lethal dose of S. pneumoniae D39. Mice that received a single i.p. dose of Pn at the time of infection showed no signs of bacteremia at 12 h postinfection and had prolonged survival times compared with the saline-treated control group (P < 0.0001). Our findings show a significant therapeutic benefit of Pn administration and suggest that its antimicrobial activity could open new avenues for fighting infections caused by multidrug-resistant neisserial or streptococcal strains. [ABSTRACT FROM AUTHOR]- Published
- 2014
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31. In Silico Molecular Docking and Simulation Studies of Protein HBx Involved in the Pathogenesis of Hepatitis B Virus-HBV.
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Shaikh, Ibrahim Ahmed, Muddapur, Uday M., C, Krithika, Badiger, Shrikanth, Kulkarni, Madhura, Mahnashi, Mater H., Alshamrani, Saleh A., Huneif, Mohammed A., More, Sunil S., Khan, Aejaz Abdullatif, and Iqubal, S. M. Shakeel
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HEPATITIS B ,MOLECULAR docking ,BINDING energy ,ETHER derivatives ,STRUCTURAL stability - Abstract
Current drug discovery involves finding leading drug candidates for further development. New scientific approaches include molecular docking, ADMET studies, and molecular dynamic simulation to determine targets and lead compounds. Hepatitis B is a disease of concern that is a life-threatening liver infection. The protein considered for the study was HBx. The hepatitis B X-interacting protein crystal structure was obtained from the PDB database (PDB ID-3MSH). Twenty ligands were chosen from the PubChem database for further in silico studies. The present study focused on in silico molecular docking studies using iGEMDOCK. The triethylene glycol monoethyl ether derivative showed an optimum binding affinity with the molecular target HBx, with a high negative affinity binding energy of −59.02 kcal/mol. Lipinski's rule of five, Veber, and Ghose were followed in subsequent ADMET studies. Molecular dynamic simulation was performed to confirm the docking studies and to analyze the stability of the structure. In these respects, the triethylene glycol monoethyl ether derivative may be a promising molecule to prepare future hepatitis B drug candidates. Substantial research effort to find a promising drug for hepatitis B is warranted in the future. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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32. Biocomputational Prediction Approach Targeting FimH by Natural SGLT2 Inhibitors: A Possible Way to Overcome the Uropathogenic Effect of SGLT2 Inhibitor Drugs.
- Author
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Mashraqi, Mutaib M., Chaturvedi, Navaneet, Alam, Qamre, Alshamrani, Saleh, Bahnass, Mosa M., Ahmad, Khurshid, Alqosaibi, Amany I., Alnamshan, Mashael M., Ahmad, Syed Sayeed, Beg, Mirza Masroor Ali, Mishra, Abha, Shaikh, Sibhghatulla, Rizvi, Syed Mohd Danish, Tutone, Marco, and Almerico, Anna Maria
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SODIUM-glucose cotransporters ,SODIUM-glucose cotransporter 2 inhibitors ,CANAGLIFLOZIN ,URINARY tract infections ,MEDICAL personnel ,MOLECULAR dynamics ,GENITALIA infections ,DAPAGLIFLOZIN - Abstract
The Food and Drug Administration (FDA) approved a new class of anti-diabetic medication (a sodium–glucose co-transporter 2 (SGLT2) inhibitor) in 2013. However, SGLT2 inhibitor drugs are under evaluation due to their associative side effects, such as urinary tract and genital infection, urinary discomfort, diabetic ketosis, and kidney problems. Even clinicians have difficulty in recommending it to diabetic patients due to the increased probability of urinary tract infection. In our study, we selected natural SGLT2 inhibitors, namely acerogenin B, formononetin, (−)-kurarinone, (+)-pteryxin, and quinidine, to explore their potential against an emerging uropathogenic bacterial therapeutic target, i.e., FimH. FimH plays a critical role in the colonization of uropathogenic bacteria on the urinary tract surface. Thus, FimH antagonists show promising effects against uropathogenic bacterial strains via their targeting of FimH's adherence mechanism with less chance of resistance. The molecular docking results showed that, among natural SGLT2 inhibitors, formononetin, (+)-pteryxin, and quinidine have a strong interaction with FimH proteins, with binding energy (∆G) and inhibition constant (ki) values of −5.65 kcal/mol and 71.95 µM, −5.50 kcal/mol and 92.97 µM, and −5.70 kcal/mol and 66.40 µM, respectively. These interactions were better than those of the positive control heptyl α-d-mannopyranoside and far better than those of the SGLT2 inhibitor drug canagliflozin. Furthermore, a 50 ns molecular dynamics simulation was conducted to optimize the interaction, and the resulting complexes were found to be stable. Physicochemical property assessments predicted little toxicity and good drug-likeness properties for these three compounds. Therefore, formononetin, (+)-pteryxin, and quinidine can be proposed as promising SGLT2 inhibitors drugs, with add-on FimH inhibition potential that might reduce the probability of uropathogenic side effects. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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33. Succinimide Derivatives as Antioxidant Anticholinesterases, Anti-α-Amylase, and Anti-α-Glucosidase: In Vitro and In Silico Approaches.
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Alshehri, Osama M., Mahnashi, Mater H., Sadiq, Abdul, Zafar, Rehman, Jan, Muhammad Saeed, Ullah, Farhat, Alshehri, Mohammed Ali, Alshamrani, Saleh, and Hassan, Elhashimi E.
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- *
IN vitro studies , *HETEROCYCLIC compounds , *ANTIOXIDANTS , *CHOLINESTERASE inhibitors , *AMYLASES , *DESCRIPTIVE statistics , *COMPUTER-assisted molecular modeling , *FREE radical scavengers , *MOLECULAR structure , *ENZYME inhibitors - Abstract
Based on the diverse pharmacological potency and the structural features of succinimide, this research considered to synthesize succinimide derivatives. Moreover, these compounds were estimated for their biological potential in terms of anti-diabetic, anti-cholinesterase, and anti-oxidant capacities. The compounds were synthesized through Michael addition of various ketones to N-aryl maleimides. Similarly, the MOE software was used for the molecular docking study to explore the binding mode of the potent compounds against different enzymes. In the anti-cholinesterase activity, the compounds MSJ2 and MSJ10 exhibited outstanding activity against acetylcholinesterase (AChE), i.e., 91.90, 93.20%, and against butyrylcholinesterase (BChE), i.e., 97.30, 91.36% inhibitory potentials, respectively. The compounds MSJ9 and MSJ10 exhibited prominent α-glucosidase inhibitory potentials, i.e., 87.63 and 89.37 with IC50 value of 32 and 28.04 μM, respectively. Moreover, the compounds MSJ2 and MSJ10 revealed significant scavenging activity against DPPH free radicals with IC50 values of 2.59 and 2.52, while against ABTS displayed excellent scavenging potential with IC50 values 7.32 and 3.29 μM, respectively. The tentative results are added with molecular docking studies in the active sites of enzymes to predict the theoretical protein-ligand binding modes. Further detailed mechanism-based studies in animal models are essential for the in vivo evaluation of the potent compound. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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34. Serological markers of transfusion transmissible infections and ABO blood groups in Najran, Saudi Arabia.
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Alshehri AA, Adebayo Irekeola A, Merae Alshahrani M, Mohammed Abdul KS, Ahmed Asiri S, Aboluluy BF, Abdullah Al Awadh A, Hassan Alhasaniah A, Abdullah Almazni I, Alshamrani SA, Alshahrani AJ, Saif AM, Elnoubi OA, Hakami AR, Abdulaziz Othman A, and Almohi MH
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- Humans, Adult, Saudi Arabia epidemiology, Male, Retrospective Studies, Female, Middle Aged, Biomarkers blood, Syphilis epidemiology, Syphilis blood, Young Adult, Transfusion Reaction epidemiology, Transfusion Reaction blood, Prevalence, Adolescent, Hepatitis B epidemiology, Hepatitis B blood, Hepatitis B Antibodies blood, HIV Infections epidemiology, HIV Infections blood, ABO Blood-Group System, Hepatitis B Surface Antigens blood, Blood Donors statistics & numerical data
- Abstract
Objectives: To ascertain the prevalence of transfusion transmissible infections (TTIs) across diverse donor groups in the Najran province. Additionally, to establish a potential association between the development of TTI and the donors' blood group, as determined by the ABO/Rh blood grouping system., Methods: Blood donation data of 4120 donors, spanning from January to December 2020, were retrospectively reviewed. The blood were screened for TTI markers, including hepatitis B surface antigen (HBsAg), anti-hepatitis B core (anti-HBc), anti-hepatitis C virus (anti-HCV), anti-human immunodeficiency viruses 1 and 2 (anti-HIV1&2), anti-human T-lymphotropic virus types 1 and 2 (anti-HTLV-1&2), and syphilis antigen., Results: Positive TTI markers were detected in 10.9% of the donors. The most detected TTI marker was anti-HBc (8.9%), followed by HBsAg (0.7%). Other markers were individually detected in <1% of the donors. Anti-HBc-positive was significantly elevated among non-Saudi blood donors. There was an association between age groups and anti-HCV ( p =0.002), anti-HTLV ( p =0.004) and syphilis antigen ( p =0.02) markers positivity. The AB positive blood group exhibited the most positivity for TTI markers, followed by O positive blood group. Similarly, association was found between ABO group and HBsAg ( p =0.01), anti-HBc ( p =0.001), and anti-HCV ( p <0.001) markers positivity., Conclusion: Emphasis on implementing robust screening measures for donated blood is underscored by this study. There is the need for future study to extensively evaluate TTI status to enhance our understanding of the trend in TTI., (Copyright: © Saudi Medical Journal.)
- Published
- 2024
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35. Application of temperature-dependent and steered molecular dynamics simulation to screen anti-dengue compounds against Marburg virus.
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Rabaan AA, Almansour ZH, Al Bshabshe A, Halwani MA, Al-Subaie MF, Al Kaabi NA, Alshamrani SA, Alshehri AA, Nahari MH, Alqahtani AS, Alhajri M, and Alissa M
- Abstract
Marburg virus infections are extremely fatal with a fatality range of 23% to 90%, therefore there is an urgent requirement to design and develop efficient therapeutic molecules. Here, a comprehensive temperature-dependent molecular dynamics (MD) simulation method was implemented to identify the potential molecule from the anti-dengue compound library that can inhibit the function of the VP24 protein of Marburg. Virtual high throughput screening identified five effective binders of VP24 after screening 484 anti-dengue compounds. These compounds were treated in MD simulation at four different temperatures: 300, 340, 380, and 420 K. Higher temperatures showed dissociation of hit compounds from the protein. Further, triplicates of 100 ns MD simulation were conducted which showed that compounds ID = 118717693 , and ID = 5361 showed strong stability with the protein molecule. These compounds were further validated using Δ G binding free energies and they showed: -30.38 kcal/mol, and -67.83 kcal/mol binding free energies, respectively. Later, these two compounds were used in steered MD simulation to detect its dissociation. Compound ID = 5361 showed the maximum pulling force of 199.02 kcal/mol/nm to dissociate the protein-ligand complex while ID = 118717693 had a pulling force of 101.11 kcal/mol/nm, respectively. This ligand highest number of hydrogen bonds with varying occupancies at 89.93%, 69.80%, 57.93%, 52.33%, and 50.63%. This study showed that ID = 5361 can bind with the VP24 strongly and has the potential to inhibit its function which can be validated in the in-vitro experiment.Communicated by Ramaswamy H. Sarma.
- Published
- 2024
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36. Omics Approaches in Drug Development against Leishmaniasis: Current Scenario and Future Prospects.
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Rabaan AA, Bakhrebah MA, Mohapatra RK, Farahat RA, Dhawan M, Alwarthan S, Aljeldah M, Al Shammari BR, Al-Najjar AH, Alhusayyen MA, Al-Absi GH, Aldawood Y, Alsaleh AA, Alshamrani SA, Almuthree SA, Alawfi A, Alshengeti A, Alwashmi ASS, Hajissa K, and Nassar MS
- Abstract
Leishmaniasis is a zoonotic disease transmitted in humans by the bite of Leishmania -infected phlebotomine sandflies. Each year approximately 58,500 cases of leishmaniasis are diagnosed across the globe, with a mortality rate of nearly seven percent. There are over 20 parasitic strains of Leishmania which are known to cause distinct types of leishmaniasis and pose an endemic threat to humans worldwide. Therefore, it is crucial to develop potential medications and vaccines to combat leishmaniasis. However, the task of developing therapeutic solutions is challenging due to Leishmania 's digenetic lifecycle. The challenge is further intensified by cases of resistance against the available drugs. Owing to these challenges, the conventional drug development regimen is further limited by target discovery and ligand suitability for the targets. On the other hand, as an added advantage, the emergence of omics-based tools, such as high-end proteomics, transcriptomics and genomics, has hastened the pace of target discovery and target-based drug development. It is now becoming apparent that multi-omics convergence and an inter-connected systems approach is less time-consuming and more cost-effective for any drug-development process. This comprehensive review is an attempt to summarize the current knowledge on the muti-omics approach in drug development against leishmaniasis. In particular, it elaborates the potential target identification from secreted proteins in various stages of Leishmania infection and also illustrates the convergence of transcriptomic and genomic data towards the collective goal of drug discovery. This review also provides an understanding of the potential parasite's drug targets and drug resistance characteristics of the parasite, which can be used in designing effective and specific therapeutics.
- Published
- 2022
- Full Text
- View/download PDF
37. Heavy Metal (Arsenic) Induced Antibiotic Resistance among Extended-Spectrum β-Lactamase (ESBL) Producing Bacteria of Nosocomial Origin.
- Author
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Ahmed N, Tahir K, Aslam S, Cheema SM, Rabaan AA, Turkistani SA, Garout M, Halwani MA, Aljeldah M, Al Shammari BR, Sabour AA, Alshiekheid MA, Alshamrani SA, Azmi RA, Al-Absi GH, Zeb S, and Yean CY
- Abstract
Antimicrobial resistance (AMR) is a leading cause of treatment failure for many infectious diseases worldwide. Improper overdosing and the misuse of antibiotics contributes significantly to the emergence of drug-resistant bacteria. The co-contamination of heavy metals and antibiotic compounds existing in the environment might also be involved in the spread of AMR. The current study was designed to test the efficacy of heavy metals (arsenic) induced AMR patterns in clinically isolated extended-spectrum β-lactamase (ESBL) producing bacteria. A total of 300 clinically isolated ESBL-producing bacteria were collected from a tertiary care hospital in Lahore, Pakistan, with the demographic characteristics of patients. After the collection of bacterial isolates, these were reinoculated on agar media for reidentification purposes. Direct antimicrobial sensitivity testing (AST) for bacterial isolates by disk diffusion methods was used to determine the AST patterns with and without heavy metal. The heavy metal was concentrated in dilutions of 1.25 g/mL. The collected bacterial isolates were isolated from wounds ( n = 63, 21%), urine ( n = 112, 37.3%), blood ( n = 43, 14.3%), pus ( n = 49, 16.3%), and aspirate ( n = 33, 11%) samples. From the total 300 bacterial isolates, n = 172 were Escherichia coli (57.3%), 57 were Klebsiella spp. (19%), 32 were Pseudomonas aeruginosa (10.6%), 21 were Proteus mirabilis (7%) and 18 were Enterobacter spp. (6%). Most of the antibiotic drugs were found resistant to tested bacteria. Colistin and Polymyxin-B showed the highest sensitivity against all tested bacteria, but when tested with heavy metals, these antibiotics were also found to be significantly resistant. We found that heavy metals induced the resistance capability in bacterial isolates, which leads to higher AMR patterns as compared to without heavy metal tested isolates. The results of the current study explored the heavy metal as an inducer of AMR and may contribute to the formation and spread of AMR in settings that are contaminated with heavy metals.
- Published
- 2022
- Full Text
- View/download PDF
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