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1. Author Correction: The FLUXNET2015 dataset and the ONEFlux processing pipeline for eddy covariance data

Author

Pastorello, Gilberto, Trotta, Carlo, Canfora, Eleonora, Chu, Housen, Christianson, Danielle, Cheah, You-Wei, Poindexter, Cristina, Chen, Jiquan, Elbashandy, Abdelrahman, Humphrey, Marty, Isaac, Peter, Polidori, Diego, Reichstein, Markus, Ribeca, Alessio, van Ingen, Catharine, Vuichard, Nicolas, Zhang, Leiming, Amiro, Brian, Ammann, Christof, Arain, M. Altaf, Ardö, Jonas, Arkebauer, Timothy, Arndt, Stefan K., Arriga, Nicola, Aubinet, Marc, Aurela, Mika, Baldocchi, Dennis, Barr, Alan, Beamesderfer, Eric, Marchesini, Luca Belelli, Bergeron, Onil, Beringer, Jason, Bernhofer, Christian, Berveiller, Daniel, Billesbach, Dave, Black, Thomas Andrew, Blanken, Peter D., Bohrer, Gil, Boike, Julia, Bolstad, Paul V., Bonal, Damien, Bonnefond, Jean-Marc, Bowling, David R., Bracho, Rosvel, Brodeur, Jason, Brümmer, Christian, Buchmann, Nina, Burban, Benoit, Burns, Sean P., Buysse, Pauline, Cale, Peter, Cavagna, Mauro, Cellier, Pierre, Chen, Shiping, Chini, Isaac, Christensen, Torben R., Cleverly, James, Collalti, Alessio, Consalvo, Claudia, Cook, Bruce D., Cook, David, Coursolle, Carole, Cremonese, Edoardo, Curtis, Peter S., D’Andrea, Ettore, da Rocha, Humberto, Dai, Xiaoqin, Davis, Kenneth J., De Cinti, Bruno, de Grandcourt, Agnes, De Ligne, Anne, De Oliveira, Raimundo C., Delpierre, Nicolas, Desai, Ankur R., Di Bella, Carlos Marcelo, di Tommasi, Paul, Dolman, Han, Domingo, Francisco, Dong, Gang, Dore, Sabina, Duce, Pierpaolo, Dufrêne, Eric, Dunn, Allison, Dušek, Jiří, Eamus, Derek, Eichelmann, Uwe, ElKhidir, Hatim Abdalla M., Eugster, Werner, Ewenz, Cacilia M., Ewers, Brent, Famulari, Daniela, Fares, Silvano, Feigenwinter, Iris, Feitz, Andrew, Fensholt, Rasmus, Filippa, Gianluca, Fischer, Marc, Frank, John, Galvagno, Marta, Gharun, Mana, Gianelle, Damiano, Gielen, Bert, Gioli, Beniamino, Gitelson, Anatoly, Goded, Ignacio, Goeckede, Mathias, Goldstein, Allen H., Gough, Christopher M., Goulden, Michael L., Graf, Alexander, Griebel, Anne, Gruening, Carsten, Grünwald, Thomas, Hammerle, Albin, Han, Shijie, Han, Xingguo, Hansen, Birger Ulf, Hanson, Chad, Hatakka, Juha, He, Yongtao, Hehn, Markus, Heinesch, Bernard, Hinko-Najera, Nina, Hörtnagl, Lukas, Hutley, Lindsay, Ibrom, Andreas, Ikawa, Hiroki, Jackowicz-Korczynski, Marcin, Janouš, Dalibor, Jans, Wilma, Jassal, Rachhpal, Jiang, Shicheng, Kato, Tomomichi, Khomik, Myroslava, Klatt, Janina, Knohl, Alexander, Knox, Sara, Kobayashi, Hideki, Koerber, Georgia, Kolle, Olaf, Kosugi, Yoshiko, Kotani, Ayumi, Kowalski, Andrew, Kruijt, Bart, Kurbatova, Julia, Kutsch, Werner L., Kwon, Hyojung, Launiainen, Samuli, Laurila, Tuomas, Law, Bev, Leuning, Ray, Li, Yingnian, Liddell, Michael, Limousin, Jean-Marc, Lion, Marryanna, Liska, Adam J., Lohila, Annalea, López-Ballesteros, Ana, López-Blanco, Efrén, Loubet, Benjamin, Loustau, Denis, Lucas-Moffat, Antje, Lüers, Johannes, Ma, Siyan, Macfarlane, Craig, Magliulo, Vincenzo, Maier, Regine, Mammarella, Ivan, Manca, Giovanni, Marcolla, Barbara, Margolis, Hank A., Marras, Serena, Massman, William, Mastepanov, Mikhail, Matamala, Roser, Matthes, Jaclyn Hatala, Mazzenga, Francesco, McCaughey, Harry, McHugh, Ian, McMillan, Andrew M. S., Merbold, Lutz, Meyer, Wayne, Meyers, Tilden, Miller, Scott D., Minerbi, Stefano, Moderow, Uta, Monson, Russell K., Montagnani, Leonardo, Moore, Caitlin E., Moors, Eddy, Moreaux, Virginie, Moureaux, Christine, Munger, J. William, Nakai, Taro, Neirynck, Johan, Nesic, Zoran, Nicolini, Giacomo, Noormets, Asko, Northwood, Matthew, Nosetto, Marcelo, Nouvellon, Yann, Novick, Kimberly, Oechel, Walter, Olesen, Jørgen Eivind, Ourcival, Jean-Marc, Papuga, Shirley A., Parmentier, Frans-Jan, Paul-Limoges, Eugenie, Pavelka, Marian, Peichl, Matthias, Pendall, Elise, Phillips, Richard P., Pilegaard, Kim, Pirk, Norbert, Posse, Gabriela, Powell, Thomas, Prasse, Heiko, Prober, Suzanne M., Rambal, Serge, Rannik, Üllar, Raz-Yaseef, Naama, Rebmann, Corinna, Reed, David, de Dios, Victor Resco, Restrepo-Coupe, Natalia, Reverter, Borja R., Roland, Marilyn, Sabbatini, Simone, Sachs, Torsten, Saleska, Scott R., Sánchez-Cañete, Enrique P., Sanchez-Mejia, Zulia M., Schmid, Hans Peter, Schmidt, Marius, Schneider, Karl, Schrader, Frederik, Schroder, Ivan, Scott, Russell L., Sedlák, Pavel, Serrano-Ortíz, Penélope, Shao, Changliang, Shi, Peili, Shironya, Ivan, Siebicke, Lukas, Šigut, Ladislav, Silberstein, Richard, Sirca, Costantino, Spano, Donatella, Steinbrecher, Rainer, Stevens, Robert M., Sturtevant, Cove, Suyker, Andy, Tagesson, Torbern, Takanashi, Satoru, Tang, Yanhong, Tapper, Nigel, Thom, Jonathan, Tomassucci, Michele, Tuovinen, Juha-Pekka, Urbanski, Shawn, Valentini, Riccardo, van der Molen, Michiel, van Gorsel, Eva, van Huissteden, Ko, Varlagin, Andrej, Verfaillie, Joseph, Vesala, Timo, Vincke, Caroline, Vitale, Domenico, Vygodskaya, Natalia, Walker, Jeffrey P., Walter-Shea, Elizabeth, Wang, Huimin, Weber, Robin, Westermann, Sebastian, Wille, Christian, Wofsy, Steven, Wohlfahrt, Georg, Wolf, Sebastian, Woodgate, William, Li, Yuelin, Zampedri, Roberto, Zhang, Junhui, Zhou, Guoyi, Zona, Donatella, Agarwal, Deb, Biraud, Sebastien, Torn, Margaret, and Papale, Dario

Published
2021
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2. The FLUXNET2015 dataset and the ONEFlux processing pipeline for eddy covariance data

Author

Pastorello, Gilberto, Trotta, Carlo, Canfora, Eleonora, Chu, Housen, Christianson, Danielle, Cheah, You-Wei, Poindexter, Cristina, Chen, Jiquan, Elbashandy, Abdelrahman, Humphrey, Marty, Isaac, Peter, Polidori, Diego, Reichstein, Markus, Ribeca, Alessio, van Ingen, Catharine, Vuichard, Nicolas, Zhang, Leiming, Amiro, Brian, Ammann, Christof, Arain, M. Altaf, Ardö, Jonas, Arkebauer, Timothy, Arndt, Stefan K., Arriga, Nicola, Aubinet, Marc, Aurela, Mika, Baldocchi, Dennis, Barr, Alan, Beamesderfer, Eric, Marchesini, Luca Belelli, Bergeron, Onil, Beringer, Jason, Bernhofer, Christian, Berveiller, Daniel, Billesbach, Dave, Black, Thomas Andrew, Blanken, Peter D., Bohrer, Gil, Boike, Julia, Bolstad, Paul V., Bonal, Damien, Bonnefond, Jean-Marc, Bowling, David R., Bracho, Rosvel, Brodeur, Jason, Brümmer, Christian, Buchmann, Nina, Burban, Benoit, Burns, Sean P., Buysse, Pauline, Cale, Peter, Cavagna, Mauro, Cellier, Pierre, Chen, Shiping, Chini, Isaac, Christensen, Torben R., Cleverly, James, Collalti, Alessio, Consalvo, Claudia, Cook, Bruce D., Cook, David, Coursolle, Carole, Cremonese, Edoardo, Curtis, Peter S., D’Andrea, Ettore, da Rocha, Humberto, Dai, Xiaoqin, Davis, Kenneth J., Cinti, Bruno De, Grandcourt, Agnes de, Ligne, Anne De, De Oliveira, Raimundo C., Delpierre, Nicolas, Desai, Ankur R., Di Bella, Carlos Marcelo, Tommasi, Paul di, Dolman, Han, Domingo, Francisco, Dong, Gang, Dore, Sabina, Duce, Pierpaolo, Dufrêne, Eric, Dunn, Allison, Dušek, Jiří, Eamus, Derek, Eichelmann, Uwe, ElKhidir, Hatim Abdalla M., Eugster, Werner, Ewenz, Cacilia M., Ewers, Brent, Famulari, Daniela, Fares, Silvano, Feigenwinter, Iris, Feitz, Andrew, Fensholt, Rasmus, Filippa, Gianluca, Fischer, Marc, Frank, John, Galvagno, Marta, Gharun, Mana, Gianelle, Damiano, Gielen, Bert, Gioli, Beniamino, Gitelson, Anatoly, Goded, Ignacio, Goeckede, Mathias, Goldstein, Allen H., Gough, Christopher M., Goulden, Michael L., Graf, Alexander, Griebel, Anne, Gruening, Carsten, Grünwald, Thomas, Hammerle, Albin, Han, Shijie, Han, Xingguo, Hansen, Birger Ulf, Hanson, Chad, Hatakka, Juha, He, Yongtao, Hehn, Markus, Heinesch, Bernard, Hinko-Najera, Nina, Hörtnagl, Lukas, Hutley, Lindsay, Ibrom, Andreas, Ikawa, Hiroki, Jackowicz-Korczynski, Marcin, Janouš, Dalibor, Jans, Wilma, Jassal, Rachhpal, Jiang, Shicheng, Kato, Tomomichi, Khomik, Myroslava, Klatt, Janina, Knohl, Alexander, Knox, Sara, Kobayashi, Hideki, Koerber, Georgia, Kolle, Olaf, Kosugi, Yoshiko, Kotani, Ayumi, Kowalski, Andrew, Kruijt, Bart, Kurbatova, Julia, Kutsch, Werner L., Kwon, Hyojung, Launiainen, Samuli, Laurila, Tuomas, Law, Bev, Leuning, Ray, Li, Yingnian, Liddell, Michael, Limousin, Jean-Marc, Lion, Marryanna, Liska, Adam J., Lohila, Annalea, López-Ballesteros, Ana, López-Blanco, Efrén, Loubet, Benjamin, Loustau, Denis, Lucas-Moffat, Antje, Lüers, Johannes, Ma, Siyan, Macfarlane, Craig, Magliulo, Vincenzo, Maier, Regine, Mammarella, Ivan, Manca, Giovanni, Marcolla, Barbara, Margolis, Hank A., Marras, Serena, Massman, William, Mastepanov, Mikhail, Matamala, Roser, Matthes, Jaclyn Hatala, Mazzenga, Francesco, McCaughey, Harry, McHugh, Ian, McMillan, Andrew M. S., Merbold, Lutz, Meyer, Wayne, Meyers, Tilden, Miller, Scott D., Minerbi, Stefano, Moderow, Uta, Monson, Russell K., Montagnani, Leonardo, Moore, Caitlin E., Moors, Eddy, Moreaux, Virginie, Moureaux, Christine, Munger, J. William, Nakai, Taro, Neirynck, Johan, Nesic, Zoran, Nicolini, Giacomo, Noormets, Asko, Northwood, Matthew, Nosetto, Marcelo, Nouvellon, Yann, Novick, Kimberly, Oechel, Walter, Olesen, Jørgen Eivind, Ourcival, Jean-Marc, Papuga, Shirley A., Parmentier, Frans-Jan, Paul-Limoges, Eugenie, Pavelka, Marian, Peichl, Matthias, Pendall, Elise, Phillips, Richard P., Pilegaard, Kim, Pirk, Norbert, Posse, Gabriela, Powell, Thomas, Prasse, Heiko, Prober, Suzanne M., Rambal, Serge, Rannik, Üllar, Raz-Yaseef, Naama, Rebmann, Corinna, Reed, David, Dios, Victor Resco de, Restrepo-Coupe, Natalia, Reverter, Borja R., Roland, Marilyn, Sabbatini, Simone, Sachs, Torsten, Saleska, Scott R., Sánchez-Cañete, Enrique P., Sanchez-Mejia, Zulia M., Schmid, Hans Peter, Schmidt, Marius, Schneider, Karl, Schrader, Frederik, Schroder, Ivan, Scott, Russell L., Sedlák, Pavel, Serrano-Ortíz, Penélope, Shao, Changliang, Shi, Peili, Shironya, Ivan, Siebicke, Lukas, Šigut, Ladislav, Silberstein, Richard, Sirca, Costantino, Spano, Donatella, Steinbrecher, Rainer, Stevens, Robert M., Sturtevant, Cove, Suyker, Andy, Tagesson, Torbern, Takanashi, Satoru, Tang, Yanhong, Tapper, Nigel, Thom, Jonathan, Tomassucci, Michele, Tuovinen, Juha-Pekka, Urbanski, Shawn, Valentini, Riccardo, van der Molen, Michiel, van Gorsel, Eva, van Huissteden, Ko, Varlagin, Andrej, Verfaillie, Joseph, Vesala, Timo, Vincke, Caroline, Vitale, Domenico, Vygodskaya, Natalia, Walker, Jeffrey P., Walter-Shea, Elizabeth, Wang, Huimin, Weber, Robin, Westermann, Sebastian, Wille, Christian, Wofsy, Steven, Wohlfahrt, Georg, Wolf, Sebastian, Woodgate, William, Li, Yuelin, Zampedri, Roberto, Zhang, Junhui, Zhou, Guoyi, Zona, Donatella, Agarwal, Deb, Biraud, Sebastien, Torn, Margaret, and Papale, Dario

Published
2020
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4. Greenness indices from digital cameras predict the timing and seasonal dynamics of canopy-scale photosynthesis

Author

Toomey, Michael, Friedl, Mark A., Frolking, Steve, Hufkens, Koen, Klosterman, Stephen, Sonnentag, Oliver, Baldocchi, Dennis D., Bernacchi, Carl J., Biraud, Sebastien C., Bohrer, Gil, Brzostek, Edward, Burns, Sean P., Coursolle, Carole, Hollinger, David Y., Margolis, Hank A., McCaughey, Harry, Monson, Russell K., Munger, J. William, Pallardy, Stephen, Phillips, Richard P., Torn, Margaret S., Wharton, Sonia, Zeri, Marcelo, and Richardson, Andrew D.

Published
2015

6. Author Correction:The FLUXNET2015 dataset and the ONEFlux processing pipeline for eddy covariance data (Scientific Data, (2020), 7, 1, (225), 10.1038/s41597-020-0534-3)

Author

Pastorello, Gilberto, Trotta, Carlo, Canfora, Eleonora, Chu, Housen, Christianson, Danielle, Cheah, You-Wei, Poindexter, Cristina, Chen, Jiquan, Elbashandy, Abdelrahman, Humphrey, Marty, Isaac, Peter, Polidori, Diego, Reichstein, Markus, Ribeca, Alessio, van Ingen, Catharine, Vuichard, Nicolas, Zhang, Leiming, Amiro, Brian, Ammann, Christof, Arain, M. Altaf, Ardo, Jonas, Arkebauer, Timothy, Arndt, Stefan K., Arriga, Nicola, Aubinet, Marc, Aurela, Mika, Baldocchi, Dennis, Barr, Alan, Beamesderfer, Eric, Marchesini, Luca Belelli, Bergeron, Onil, Beringer, Jason, Bernhofer, Christian, Berveiller, Daniel, Billesbach, Dave, Black, Thomas Andrew, Blanken, Peter D., Bohrer, Gil, Boike, Julia, Bolstad, Paul V., Bonal, Damien, Bonnefond, Jean-Marc, Bowling, David R., Bracho, Rosvel, Brodeur, Jason, Brummer, Christian, Buchmann, Nina, Burban, Benoit, Burns, Sean P., Buysse, Pauline, Cale, Peter, Cavagna, Mauro, Cellier, Pierre, Chen, Shiping, Chini, Isaac, Christensen, Torben R., Cleverly, James, Collalti, Alessio, Consalvo, Claudia, Cook, Bruce D., Cook, David, Coursolle, Carole, Cremonese, Edoardo, Curtis, Peter S., D'Andrea, Ettore, da Rocha, Humberto, Dai, Xiaoqin, Davis, Kenneth J., De Cinti, Bruno, de Grandcourt, Agnes, De Ligne, Anne, De Oliveira, Raimundo C., Delpierre, Nicolas, Desai, Ankur R., Di Bella, Carlos Marcelo, di Tommasi, Paul, Dolman, Han, Domingo, Francisco, Dong, Gang, Dore, Sabina, Duce, Pierpaolo, Dufrene, Eric, Dunn, Allison, Dusek, Jiri, Eamus, Derek, Eichelmann, Uwe, ElKhidir, Hatim Abdalla M., Eugster, Werner, Ewenz, Cacilia M., Ewers, Brent, Famulari, Daniela, Fares, Silvano, Feigenwinter, Iris, Feitz, Andrew, Fensholt, Rasmus, Filippa, Gianluca, Fischer, Marc, Frank, John, Galvagno, Marta, Gharun, Mana, Gianelle, Damiano, Gielen, Bert, Gioli, Beniamino, Gitelson, Anatoly, Goded, Ignacio, Goeckede, Mathias, Goldstein, Allen H., Gough, Christopher M., Goulden, Michael L., Graf, Alexander, Griebel, Anne, Gruening, Carsten, Grunwald, Thomas, Hammerle, Albin, Han, Shijie, Han, Xingguo, Hansen, Birger Ulf, Hanson, Chad, Hatakka, Juha, He, Yongtao, Hehn, Markus, Heinesch, Bernard, Hinko-Najera, Nina, Hortnagl, Lukas, Hutley, Lindsay, Ibrom, Andreas, Ikawa, Hiroki, Jackowicz-Korczynski, Marcin, Janous, Dalibor, Jans, Wilma, Jassal, Rachhpal, Jiang, Shicheng, Kato, Tomomichi, Khomik, Myroslava, Klatt, Janina, Knohl, Alexander, Knox, Sara, Kobayashi, Hideki, Koerber, Georgia, Kolle, Olaf, Kosugi, Yoshiko, Kotani, Ayumi, Kowalski, Andrew, Kruijt, Bart, Kurbatova, Julia, Kutsch, Werner L., Kwon, Hyojung, Launiainen, Samuli, Laurila, Tuomas, Law, Bev, Leuning, Ray, Li, Yingnian, Liddell, Michael, Limousin, Jean-Marc, Lion, Marryanna, Liska, Adam J., Lohila, Annalea, Lopez-Ballesteros, Ana, Lopez-Blanco, Efren, Loubet, Benjamin, Loustau, Denis, Lucas-Moffat, Antje, Luers, Johannes, Ma, Siyan, Macfarlane, Craig, Magliulo, Vincenzo, Maier, Regine, Mammarella, Ivan, Manca, Giovanni, Marcolla, Barbara, Margolis, Hank A., Marras, Serena, Massman, William, Mastepanov, Mikhail, Matamala, Roser, Matthes, Jaclyn Hatala, Mazzenga, Francesco, McCaughey, Harry, McHugh, Ian, McMillan, Andrew M. S., Merbold, Lutz, Meyer, Wayne, Meyers, Tilden, Miller, Scott D., Minerbi, Stefano, Moderow, Uta, Monson, Russell K., Montagnani, Leonardo, Moore, Caitlin E., Moors, Eddy, Moreaux, Virginie, Moureaux, Christine, Munger, J. William, Nakai, Taro, Neirynck, Johan, Nesic, Zoran, Nicolini, Giacomo, Noormets, Asko, Northwood, Matthew, Nosetto, Marcelo, Nouvellon, Yann, Novick, Kimberly, Oechel, Walter, Olesen, Jorgen Eivind, Ourcival, Jean-Marc, Papuga, Shirley A., Parmentier, Frans-Jan, Paul-Limoges, Eugenie, Pavelka, Marian, Peichl, Matthias, Pendall, Elise, Phillips, Richard P., Pilegaard, Kim, Pirk, Norbert, Posse, Gabriela, Powell, Thomas, Prasse, Heiko, Prober, Suzanne M., Rambal, Serge, Rannik, Ullar, Raz-Yaseef, Naama, Rebmann, Corinna, Reed, David, de Dios, Victor Resco, Restrepo-Coupe, Natalia, Reverter, Borja R., Roland, Marilyn, Sabbatini, Simone, Sachs, Torsten, Saleska, Scott R., Sanchez-Canete, Enrique P., Sanchez-Mejia, Zulia M., Schmid, Hans Peter, Schmidt, Marius, Schneider, Karl, Schrader, Frederik, Schroder, Ivan, Scott, Russell L., Sedlak, Pavel, Serrano-Ortiz, Penelope, Shao, Changliang, Shi, Peili, Shironya, Ivan, Siebicke, Lukas, Sigut, Ladislav, Silberstein, Richard, Sirca, Costantino, Spano, Donatella, Steinbrecher, Rainer, Stevens, Robert M., Sturtevant, Cove, Suyker, Andy, Tagesson, Torbern, Takanashi, Satoru, Tang, Yanhong, Tapper, Nigel, Thom, Jonathan, Tomassucci, Michele, Tuovinen, Juha-Pekka, Urbanski, Shawn, Valentini, Riccardo, van der Molen, Michiel, van Gorsel, Eva, van Huissteden, Ko, Varlagin, Andrej, Verfaillie, Joseph, Vesala, Timo, Vincke, Caroline, Vitale, Domenico, Vygodskaya, Natalia, Walker, Jeffrey P., Walter-Shea, Elizabeth, Wang, Huimin, Weber, Robin, Westermann, Sebastian, Wille, Christian, Wofsy, Steven, Wohlfahrt, Georg, Wolf, Sebastian, Woodgate, William, Li, Yuelin, Zampedri, Roberto, Zhang, Junhui, Zhou, Guoyi, Zona, Donatella, Agarwal, Deb, Biraud, Sebastien, Torn, Margaret, and Papale, Dario

Abstract

The following authors were omitted from the original version of this Data Descriptor: Markus Reichstein and Nicolas Vuichard. Both contributed to the code development and N. Vuichard contributed to the processing of the ERA-Interim data downscaling. Furthermore, the contribution of the co-author Frank Tiedemann was re-evaluated relative to the colleague Corinna Rebmann, both working at the same sites, and based on this re-evaluation a substitution in the co-author list is implemented (with Rebmann replacing Tiedemann). Finally, two affiliations were listed incorrectly and are corrected here (entries 190 and 193). The author list and affiliations have been amended to address these omissions in both the HTML and PDF versions.

Published
2021

7. Measuring Rapid A–Ci Curves in Boreal Conifers: Black Spruce and Balsam Fir.

Author

Coursolle, Carole, Otis Prud'homme, Guillaume, Lamothe, Manuel, and Isabel, Nathalie

Subjects
BALSAM fir, BLACK spruce, CONIFERS, PHOTOSYNTHETIC rates, LEAF area, POPLARS, PINACEAE
Abstract

Climate change is steering tree breeding programs towards the development of families and genotypes that will be adapted and more resilient to changing environments. Making genotype–phenotype–environment connections is central to these predictions and it requires the evaluation of functional traits such as photosynthetic rates that can be linked to environmental variables. However, the ability to rapidly measure photosynthetic parameters has always been limiting. The estimation of V c,max and J max using CO2 response curves has traditionally been time consuming, taking anywhere from 30 min to more than an hour, thereby drastically limiting the number of trees that can be assessed per day. Technological advancements have led to the development of a new generation of portable photosynthesis measurement systems offering greater chamber environmental control and automated sampling and, as a result, the proposal of a new, faster, method (RACiR) for measuring V c,max and J max. This method was developed using poplar trees and involves measuring photosynthetic responses to CO2 over a range of CO2 concentrations changing at a constant rate. The goal of the present study was to adapt the RACiR method for use on conifers whose measurement usually requires much larger leaf chambers. We demonstrate that the RACiR method can be used to estimate V c,max and J max in conifers and provide recommendations to enhance the method. The use our method in conifers will substantially reduce measurement time, thus greatly improving genotype evaluation and selection capabilities based on photosynthetic traits. This study led to the developpement of an R package (RapidACi, https://github.com/ManuelLamothe/RapidACi) that facilitates the correction of multiple RACiR files and the post-measurement correction of leaf areas. [ABSTRACT FROM AUTHOR]

Published
2019
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8. Decreasing photosynthesis at different spatial scales during the late growing season on a boreal cutover.

Author

Martel, Marie-Claude, Margolis, Hank A., Coursolle, Carole, Bigras, Francine J., Heinsch, Faith Ann, and Running, Steven W.

Subjects
PHOTOSYNTHESIS, CUTOVER lands, TAIGAS, PLANT growth, PLANT shoots, PLANT productivity, MODIS (Spectroradiometer)
Abstract

The relationship between photosynthesis and accumulated cold degree days (CDD) over the late growing season was examined at the shoot, ecosystem and landscape scales in a boreal cutover in eastern Canada predominated by black spruce (Picea mariana Mill. BSP), lowbush blueberry (Vaccinium angustifolium Ait.) and sheep laurel (Kalmia angustifolia L.). We calculated CDD as the sum of minimum daily temperatures below a 5 °C threshold. Light-saturated photosynthesis at the shoot level (Amax) of black spruce and V. angustifolium decreased steadily with increasing CDD once temperatures below the CDD threshold value became frequent in mid-September, whereas K. angustifolia showed a more irregular pattern. Tissue acclimation played an important role in the decrease in Amax as the season progressed, but only V. angustifolium showed decreasing foliar nitrogen concentrations.Based on eddy covariance flux tower data, maximum daily gross primary productivity (GPPmax-tower) at the ecosystem level was more strongly related to CDD (r2 = 0.59) than was maximum daily net ecosystem exchange (r2 = 0.32). The GPPmax was likely influenced by both tissue acclimation and the direct effects of changing temperatures and irradiances on physiological rates. Mean daily GPP, calculated for consecutive 8-day periods for a 25 km2 area around the tower by the MODIS MOD17A2 Collection 4 satellite algorithm (GPP- MODIS), decreased more rapidly with increasing CDD than did GPPmax-tower. Although GPP-MODIS was closely correlated with mean daily GPP from the tower (GPPdaily-tower, r2 = 0.95) over the late growing season, the former was about twice as high. Although MODIS estimates of air temperature closely tracked the ground data, the maximum light-use efficiency parameter used by the MODIS algorithm was much higher than that indicated by the tower measurements. There was a 3% decline in GPPmax-tower with an increase of 10 CDD, corresponding to the percent decline in branch-level Amax of black spruce and V. angustifolium. [ABSTRACT FROM AUTHOR]

Published
2005
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9. Greenness indices from digital cameras predict the timing and seasonal dynamics of canopy-scale photosynthesis

Author

Toomey, Michael, Friedl, Mark, Frolking, Steve, Hufkens, Koen, Klosterman, Stephen, Sonnentag, Oliver, Baldocchi, Dennis, Bernacchi, Carl, Biraud, Sebastien, Bohrer, Gil, Brzostek, Edward, Burns, Sean P., Coursolle, Carole, Hollinger, David Y., Margolis, Hank A., McCaughey, Harry, Monson, Russell K., Munger, J. William, Pallardy, Stephen, Phillips, Richard P., Torn, Margaret, Wharton, Sonia, Zeri, Marcello, and Richardson, Andrew

Abstract

The proliferation of digital cameras co-located with eddy covariance instrumentation provides new opportunities to better understand the relationship between canopy phenology and the seasonality of canopy photosynthesis. In this paper we analyze the abilities and limitations of canopy color metrics measured by digital repeat photography to track seasonal canopy development and photosynthesis, determine phenological transition dates, and estimate intra-annual and interannual variability in canopy photosynthesis. We used 59 site-years of camera imagery and net ecosystem exchange measurements from 17 towers spanning three plant functional types (deciduous broadleaf forest, evergreen needle leaf forest and grassland/crops) to derive color indices and estimate gross primary productivity (GPP). GPP was strongly correlated with greenness derived from camera imagery in all three plant functional types. Specifically, the beginning of the photosynthetic period in deciduous broadleaf forest and grassland/crops and the end of the photosynthetic period in grassland/crops were both correlated with changes in greenness; changes in redness were correlated with the end of the photosynthetic period in deciduous broadleaf forest. However, it was not possible to accurately identify the beginning or ending of the photosynthetic period using camera greenness in evergreen needle leaf forest. At deciduous broadleaf sites, anomalies in integrated greenness and total GPP were significantly correlated up to 60 days after the mean onset date for the start of spring. More generally, results from this work demonstrate that digital repeat photography can be used to quantify both the duration of the photosynthetically active period as well as total GPP in deciduous broadleaf forest and grassland/crops, but that new and different approaches are required before comparable results can be achieved in evergreen needleleaf forest., Engineering and Applied Sciences, Organismic and Evolutionary Biology

Published
2014
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10. Modeling Analysis of Primary Controls on Net Ecosystem Productivity of Seven Boreal and Temperate Coniferous Forests Across a Continental Transect

Author

McCaughey, J. Harry, Margolis, Hank A., Coursolle, Carole, Bourque, Charles P. A., Black, T. Andrew, Barr, Alan G., Arain, M. Altaf, Yuan, Fengming, and Wofsy, Steven C.

Subjects
temperate forests, net ecosystem productivity, ecosystem model, carbon cycle, Canadain land surface scheme, boreal forests
Abstract

Process-based models are effective tools to synthesize and/or extrapolate measured carbon (C) exchanges from individual sites to large scales. In this study, we used a C- and nitrogen (N)-cycle coupled ecosystem model named CN-CLASS (Carbon Nitrogen-Canadian Land Surface Scheme) to study the role of primary climatic controls and site-specific C stocks on the net ecosystem productivity (NEP) of seven intermediate-aged to mature coniferous forest sites across an east–west continental transect in Canada. The model was parameterized using a common set of parameters, except for two used in empirical canopy conductance–assimilation, and leaf area–sapwood relationships, and then validated using observed eddy covariance flux data. Leaf Rubisco-N dynamics that are associated with soil–plant N cycling, and depend on canopy temperature, enabled the model to simulate site-specific gross ecosystem productivity (GEP) reasonably well for all seven sites. Overall GEP simulations had relatively smaller differences compared with observations vs. ecosystem respiration (RE), which was the sum of many plant and soil components with larger variability and/or uncertainty associated with them. Both observed and simulated data showed that, on an annual basis, boreal forest sites were either carbon-neutral or a weak C sink, ranging from 30 to 180 g C m−2 yr−1; while temperate forests were either a medium or strong C sink, ranging from 150 to 500 g C m−2 yr−1, depending on forest age and climatic regime. Model sensitivity tests illustrated that air temperature, among climate variables, and aboveground biomass, among major C stocks, were dominant factors impacting annual NEP. Vegetation biomass effects on annual GEP, RE and NEP showed similar patterns of variability at four boreal and three temperate forests. Air temperature showed different impacts on GEP and RE, and the response varied considerably from site to site. Higher solar radiation enhanced GEP, while precipitation differences had a minor effect. Magnitude of forest litter content and soil organic matter (SOM) affected RE. SOM also affected GEP, but only at low levels of SOM, because of low N mineralization that limited soil nutrient (N) availability. The results of this study will help to evaluate the impact of future climatic changes and/or forest C stock variations on C uptake and loss in forest ecosystems growing in diverse environments., Earth and Planetary Sciences

Published
2008
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11. The FLUXNET2015 dataset and the ONEFlux processing pipeline for eddy covariance data

Author

Pastorello, Gilberto, Trotta, Carlo, Canfora, Eleonora, Chu, Housen, Christianson, Danielle, Cheah, You-Wei, Poindexter, Cristina, Chen, Jiquan, Elbashandy, Abdelrahman, Humphrey, Marty, Isaac, Peter, Polidori, Diego, Ribeca, Alessio, Van Ingen, Catharine, Zhang, Leiming, Amiro, Brian, Ammann, Christof, Arain, M. Altaf, Ardö, Jonas, Arkebauer, Timothy, Arndt, Stefan K., Arriga, Nicola, Aubinet, Marc, Aurela, Mika, Baldocchi, Dennis, Barr, Alan, Beamesderfer, Eric, Marchesini, Luca Belelli, Bergeron, Onil, Beringer, Jason, Bernhofer, Christian, Berveiller, Daniel, Billesbach, Dave, Black, Thomas Andrew, Blanken, Peter D., Bohrer, Gil, Boike, Julia, Bolstad, Paul V., Bonal, Damien, Bonnefond, Jean-Marc, Bowling, David R., Bracho, Rosvel, Brodeur, Jason, Brümmer, Christian, Buchmann, Nina, Burban, Benoit, Burns, Sean P., Buysse, Pauline, Cale, Peter, Cavagna, Mauro, Cellier, Pierre, Chen, Shiping, Chini, Isaac, Christensen, Torben R., Cleverly, James, Collalti, Alessio, Consalvo, Claudia, Cook, Bruce D., Cook, David, Coursolle, Carole, Cremonese, Edoardo, Curtis, Peter S., D’Andrea, Ettore, Da Rocha, Humberto, Dai, Xiaoqin, Davis, Kenneth J., De Cinti, Bruno, De Grandcourt, Agnes, De Ligne, Anne, De Oliveira, Raimundo C., Delpierre, Nicolas, Desai, Ankur R., Di Bella, Carlos Marcelo, Di Tommasi, Paul, Dolman, Han, Domingo, Francisco, Dong, Gang, Dore, Sabina, Duce, Pierpaolo, Dufrêne, Eric, Dunn, Allison, Dušek, Jiří, Eamus, Derek, Eichelmann, Uwe, ElKhidir, Hatim Abdalla M., Eugster, Werner, Ewenz, Cacilia M., Ewers, Brent, Famulari, Daniela, Fares, Silvano, Feigenwinter, Iris, Feitz, Andrew, Fensholt, Rasmus, Filippa, Gianluca, Fischer, Marc, Frank, John, Galvagno, Marta, Gharun, Mana, Gianelle, Damiano, Gielen, Bert, Gioli, Beniamino, Gitelson, Anatoly, Goded, Ignacio, Goeckede, Mathias, Goldstein, Allen H., Gough, Christopher M., Goulden, Michael L., Graf, Alexander, Griebel, Anne, Gruening, Carsten, Grünwald, Thomas, Hammerle, Albin, Han, Shijie, Han, Xingguo, Hansen, Birger Ulf, Hanson, Chad, Hatakka, Juha, He, Yongtao, Hehn, Markus, Heinesch, Bernard, Hinko-Najera, Nina, Hörtnagl, Lukas, Hutley, Lindsay, Ibrom, Andreas, Ikawa, Hiroki, Jackowicz-Korczynski, Marcin, Janouš, Dalibor, Jans, Wilma, Jassal, Rachhpal, Jiang, Shicheng, Kato, Tomomichi, Khomik, Myroslava, Klatt, Janina, Knohl, Alexander, Knox, Sara, Kobayashi, Hideki, Koerber, Georgia, Kolle, Olaf, Kosugi, Yoshiko, Kotani, Ayumi, Kowalski, Andrew, Kruijt, Bart, Kurbatova, Julia, Kutsch, Werner L., Kwon, Hyojung, Launiainen, Samuli, Laurila, Tuomas, Law, Bev, Leuning, Ray, Li, Yingnian, Liddell, Michael, Limousin, Jean-Marc, Lion, Marryanna, Liska, Adam J., Lohila, Annalea, López-Ballesteros, Ana, López-Blanco, Efrén, Loubet, Benjamin, Loustau, Denis, Lucas-Moffat, Antje, Lüers, Johannes, Ma, Siyan, Macfarlane, Craig, Magliulo, Vincenzo, Maier, Regine, Mammarella, Ivan, Manca, Giovanni, Marcolla, Barbara, Margolis, Hank A., Marras, Serena, Massman, William, Mastepanov, Mikhail, Matamala, Roser, Matthes, Jaclyn Hatala, Mazzenga, Francesco, McCaughey, Harry, McHugh, Ian, McMillan, Andrew M. S., Merbold, Lutz, Meyer, Wayne, Meyers, Tilden, Miller, Scott D., Minerbi, Stefano, Moderow, Uta, Monson, Russell K., Montagnani, Leonardo, Moore, Caitlin E., Moors, Eddy, Moreaux, Virginie, Moureaux, Christine, Munger, J. William, Nakai, Taro, Neirynck, Johan, Nesic, Zoran, Nicolini, Giacomo, Noormets, Asko, Northwood, Matthew, Nosetto, Marcelo, Nouvellon, Yann, Novick, Kimberly, Oechel, Walter, Olesen, Jørgen Eivind, Ourcival, Jean-Marc, Papuga, Shirley A., Parmentier, Frans-Jan, Paul-Limoges, Eugenie, Pavelka, Marian, Peichl, Matthias, Pendall, Elise, Phillips, Richard P., Pilegaard, Kim, Pirk, Norbert, Posse, Gabriela, Powell, Thomas, Prasse, Heiko, Prober, Suzanne M., Rambal, Serge, Rannik, Üllar, Raz-Yaseef, Naama, Reed, David, De Dios, Victor Resco, Restrepo-Coupe, Natalia, Reverter, Borja R., Roland, Marilyn, Sabbatini, Simone, Sachs, Torsten, Saleska, Scott R., Sánchez-Cañete, Enrique P., Sanchez-Mejia, Zulia M., Schmid, Hans Peter, Schmidt, Marius, Schneider, Karl, Schrader, Frederik, Schroder, Ivan, Scott, Russell L., Sedlák, Pavel, Serrano-Ortíz, Penélope, Shao, Changliang, Shi, Peili, Shironya, Ivan, Siebicke, Lukas, Šigut, Ladislav, Silberstein, Richard, Sirca, Costantino, Spano, Donatella, Steinbrecher, Rainer, Stevens, Robert M., Sturtevant, Cove, Suyker, Andy, Tagesson, Torbern, Takanashi, Satoru, Tang, Yanhong, Tapper, Nigel, Thom, Jonathan, Tiedemann, Frank, Tomassucci, Michele, Tuovinen, Juha-Pekka, Urbanski, Shawn, Valentini, Riccardo, Van Der Molen, Michiel, Van Gorsel, Eva, Van Huissteden, Ko, Varlagin, Andrej, Verfaillie, Joseph, Vesala, Timo, Vincke, Caroline, Vitale, Domenico, Vygodskaya, Natalia, Walker, Jeffrey P., Walter-Shea, Elizabeth, Wang, Huimin, Weber, Robin, Westermann, Sebastian, Wille, Christian, Wofsy, Steven, Wohlfahrt, Georg, Wolf, Sebastian, Woodgate, William, Li, Yuelin, Zampedri, Roberto, Zhang, Junhui, Zhou, Guoyi, Zona, Donatella, Agarwal, Deb, Biraud, Sebastien, Torn, Margaret, and Papale, Dario

Subjects
13. Climate action, 15. Life on land
Abstract

The FLUXNET2015 dataset provides ecosystem-scale data on CO2, water, and energy exchange between the biosphere and the atmosphere, and other meteorological and biological measurements, from 212 sites around the globe (over 1500 site-years, up to and including year 2014). These sites, independently managed and operated, voluntarily contributed their data to create global datasets. Data were quality controlled and processed using uniform methods, to improve consistency and intercomparability across sites. The dataset is already being used in a number of applications, including ecophysiology studies, remote sensing studies, and development of ecosystem and Earth system models. FLUXNET2015 includes derived-data products, such as gap-filled time series, ecosystem respiration and photosynthetic uptake estimates, estimation of uncertainties, and metadata about the measurements, presented for the first time in this paper. In addition, 206 of these sites are for the first time distributed under a Creative Commons (CC-BY 4.0) license. This paper details this enhanced dataset and the processing methods, now made available as open-source codes, making the dataset more accessible, transparent, and reproducible.

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