1. Analysis of Mechanism of Arsenic Exposure-induced Cognitive Changes in Mice Based on RNA Sequencing.
- Author
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Yuan Xiaohong, Hu Xin, Yang Mingyu, Han Mingsheng, and Ma Yanqin
- Subjects
RNA sequencing ,ARSENIC ,GENE expression ,GENE regulatory networks ,DEIONIZATION of water ,ARSENIC compounds ,DRINKING water - Abstract
Arsenic exposure-induced cognitive disorders have attracted much attention from scientists. This study employed RNA sequencing to investigate the potential molecular mechanisms underlying neurobehavioral alterations in mice due to arsenic exposure at a transcriptomic level. Male C57BL/6 mice were divided into four groups, the control group (group C), low-dose group (group L), medium-dose group (group M) and high-dose group (group H), which drank deionized water containing 0, 0.15, 1.5 and 15 mg·L
-1 AS2 O3 respectively for 12 weeks. Cognitive function of the mice was analyzed by the novel object recognition test. RNA sequencing followed by GO enrichment analysis and KEGG pathway enrichment analysis identified differentially expressed genes (DEGs) between control and high dose groups. qRT-PCR was conducted to verify the gene expression levels of target genes. A protein-protein interaction network (PPI) was constructed to identify hub genes from the gene module with the highest connection degree. The findings indicated a significant decrease in both exploration and discrimination indices for arsenic-exposed groups compared to controls. There were 181 DEGs in the high-dose group compared with the control. A total of 217 significantly enriched GO terms were obtained including behavior, regulation of multicellular biological processes, learning and memory, cognition, etc. KEGG enrichment analysis showed that 128 DEGs were enriched in 38 pathways, including cholinergic synapses, dopamine synapses, neurotrophic factor signaling pathways, etc. 7 hub genes were screened from the gene module with the highest connection degree, which were fos, tac1, gad2, drd2, ppp1r1b, chat and drd1a. The results of gene expression levels from qRT-PCR are in good agreement with those from RNA-seq, reflecting the reliability of RNA-seq. It was observed that arsenic exposure led to a significant reduction in mice' s cognitive abilities. The identified hub genes and key pathways from this study offer valuable insights into exploring the mechanisms underlying neurobehavioral changes in mice due to arsenic exposure. [ABSTRACT FROM AUTHOR]- Published
- 2023
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