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Your search keyword '"Michael A. Quail"' showing total 14 results
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14 results on '"Michael A. Quail"'

1. The complete genome sequence of Eimeria tenella (Tyzzer 1929), a common gut parasite of chickens [version 1; peer review: 2 approved]

Author

Eerik Aunin, Ulrike Böhme, Damer Blake, Alexander Dove, Michelle Smith, Craig Corton, Karen Oliver, Emma Betteridge, Michael A. Quail, Shane A. McCarthy, Jonathan Wood, Alan Tracey, James Torrance, Ying Sims, Kerstin Howe, Richard Challis, Matthew Berriman, and Adam Reid

Subjects
Medicine, Science
Abstract

We present a genome assembly from a clonal population of Eimeria tenella Houghton parasites (Apicomplexa; Conoidasida; Eucoccidiorida; Eimeriidae). The genome sequence is 53.25 megabases in span. The entire assembly is scaffolded into 15 chromosomal pseudomolecules, with complete mitochondrion and apicoplast organellar genomes also present.

Published
2021
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2. The genome sequence of the European turtle dove, Streptopelia turtur Linnaeus 1758 [version 1; peer review: 2 approved]

Author

Jenny C. Dunn, Michael A. Quail, James Torrance, Ying Sims, Marcela Uliano-Silva, Richard Challis, Antony J. Morris, Keith C. Hamer, Sarah Pelan, William Chow, Philip V. Grice, Mark Blaxter, Daniel Mead, Craig Corton, Michelle Smith, Jason Skelton, Karen Oliver, Emma Betteridge, Shane A. McCarthy, Jonathan Threlfall, Jale Dolucan, and Kerstin Howe

Subjects
Streptopelia turtur, European turtle dove, genome sequence, chromosomal, eng, Medicine, Science
Abstract

We present a genome assembly from an individual female Streptopelia turtur (the European turtle dove; Chordata; Aves; Columbidae). The genome sequence is 1.18 gigabases in span. The majority of the assembly is scaffolded into 35 chromosomal pseudomolecules, with the W and Z sex chromosomes assembled.

Published
2021
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3. The genome sequence of the European water vole, Arvicola amphibius Linnaeus 1758 [version 1; peer review: 2 approved]

Author

Michael A. Quail, James Torrance, Ying Sims, Richard Challis, Sarah Pelan, Mark Blaxter, Daniel Mead, Marcela Uliano Da Silva, Angus I. Carpenter, Craig Corton, Michelle Smith, Francesca Floriana Tricomi, Jason Skelton, Karen Oliver, Emma Betteridge, Jale Doulcan, Shane A. McCarthy, Jonathan Wood, Jonathan Threlfall, and Kerstin Howe

Subjects
Arvicola amphibius, European water vole, genome sequence, chromosomal, eng, Medicine, Science
Abstract

We present a genome assembly from an individual male Arvicola amphibius (the European water vole; Chordata; Mammalia; Rodentia; Cricetidae). The genome sequence is 2.30 gigabases in span. The majority of the assembly is scaffolded into 18 chromosomal pseudomolecules, including the X sex chromosome. Gene annotation of this assembly on Ensembl has identified 21,394 protein coding genes.

Published
2021
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4. The genome sequence of the European golden eagle, Aquila chrysaetos chrysaetos Linnaeus 1758 [version 1; peer review: 2 approved]

Author

Dan Mead, Rob Ogden, Anna Meredith, Gabriela Peniche, Michelle Smith, Craig Corton, Karen Oliver, Jason Skelton, Emma Betteridge, Jale Doulcan, Nadine Holmes, Victoria Wright, Matt Loose, Michael A. Quail, Shane A. McCarthy, Kerstin Howe, William Chow, James Torrance, Joanna Collins, Richard Challis, Richard Durbin, and Mark Blaxter

Subjects
Medicine, Science
Abstract

We present a genome assembly from an individual female Aquila chrysaetos chrysaetos (the European golden eagle; Chordata; Aves; Accipitridae). The genome sequence is 1.23 gigabases in span. The majority of the assembly is scaffolded into 28 chromosomal pseudomolecules, including the W and Z sex chromosomes.

Published
2021
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5. The genome sequence of the Norway rat, Rattus norvegicus Berkenhout 1769 [version 1; peer review: 2 approved]

Author

Kerstin Howe, Melinda Dwinell, Mary Shimoyama, Craig Corton, Emma Betteridge, Alexander Dove, Michael A. Quail, Michelle Smith, Laura Saba, Robert W. Williams, Hao Chen, Anne E. Kwitek, Shane A. McCarthy, Marcela Uliano-Silva, William Chow, Alan Tracey, James Torrance, Ying Sims, Richard Challis, Jonathan Threlfall, and Mark Blaxter

Subjects
Medicine, Science
Abstract

We present a genome assembly from an individual male Rattus norvegicus (the Norway rat; Chordata; Mammalia; Rodentia; Muridae). The genome sequence is 2.44 gigabases in span. The majority of the assembly is scaffolded into 20 chromosomal pseudomolecules, with both X and Y sex chromosomes assembled. This genome assembly, mRatBN7.2, represents the new reference genome for R. norvegicus and has been adopted by the Genome Reference Consortium.

Published
2021
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6. The genome sequence of the eastern grey squirrel, Sciurus carolinensis Gmelin, 1788 [version 1; peer review: 2 approved]

Author

Dan Mead, Kathryn Fingland, Rachel Cripps, Roberto Portela Miguez, Michelle Smith, Craig Corton, Karen Oliver, Jason Skelton, Emma Betteridge, Jale Doulcan, Michael A. Quail, Shane A. McCarthy, Kerstin Howe, Ying Sims, James Torrance, Alan Tracey, Richard Challis, Richard Durbin, and Mark Blaxter

Subjects
Medicine, Science
Abstract

We present a genome assembly from an individual male Sciurus carolinensis (the eastern grey squirrel; Vertebrata; Mammalia; Eutheria; Rodentia; Sciuridae). The genome sequence is 2.82 gigabases in span. The majority of the assembly (92.3%) is scaffolded into 21 chromosomal-level scaffolds, with both X and Y sex chromosomes assembled.

Published
2020
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7. The genome sequence of the European water vole

Author

Angus I, Carpenter, Michelle, Smith, Craig, Corton, Karen, Oliver, Jason, Skelton, Emma, Betteridge, Jale, Doulcan, Michael A, Quail, Shane A, McCarthy, Marcela, Uliano Da Silva, Kerstin, Howe, James, Torrance, Jonathan, Wood, Sarah, Pelan, Ying, Sims, Francesca Floriana, Tricomi, Richard, Challis, Jonathan, Threlfall, Daniel, Mead, and Mark, Blaxter

Abstract

We present a genome assembly from an individual male

Published
2021

8. The genome sequence of the European golden eagle, Aquila chrysaetos chrysaetos Linnaeus 1758

Author

Michael A. Quail, William Chow, Matthew Loose, Emma Betteridge, Dan Mead, Craig Corton, Shane A. McCarthy, Rob Ogden, Nadine Holmes, Jason Skelton, Anna Meredith, Karen Oliver, Victoria Wright, Joanna Collins, Richard Durbin, Gabriela Peniche, James Torrance, Richard Challis, Michelle Smith, Mark Blaxter, Jale Doulcan, and Kerstin Howe

Subjects
0106 biological sciences, Whole genome sequencing, Eagle, 0303 health sciences, biology, Aquila chrysaetos, genome sequence, Medicine (miscellaneous), Sequence assembly, European golden eagle, Articles, biology.organism_classification, Data Note, 010603 evolutionary biology, 01 natural sciences, General Biochemistry, Genetics and Molecular Biology, 03 medical and health sciences, Evolutionary biology, biology.animal, Accipitridae, chromosomal, 030304 developmental biology
Abstract

We present a genome assembly from an individual female Aquila chrysaetos chrysaetos (the European golden eagle; Chordata; Aves; Accipitridae). The genome sequence is 1.23 gigabases in span. The majority of the assembly is scaffolded into 28 chromosomal pseudomolecules, including the W and Z sex chromosomes.

Published
2021
Full Text
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9. The genome sequence of the Norway rat, Rattus norvegicus Berkenhout 1769

Author

Emma Betteridge, Laura Saba, Anne E. Kwitek, William Chow, Mary Shimoyama, Shane A. McCarthy, Marcela Uliano-Silva, Alan Tracey, Robert W. Williams, Michael A. Quail, James Torrance, Kerstin Howe, Richard Challis, Michelle Smith, Hao Chen, Mark Blaxter, Craig Corton, Alexander Dove, Ying Sims, Jonathan Threlfall, and Melinda R. Dwinell

Subjects
viruses, genome sequence, Medicine (miscellaneous), Sequence assembly, Data Note, General Biochemistry, Genetics and Molecular Biology, 03 medical and health sciences, 0302 clinical medicine, Genome Reference Consortium, chromosomal, reference genome, 030304 developmental biology, Muridae, Genetics, Whole genome sequencing, 0303 health sciences, biology, virus diseases, Articles, biochemical phenomena, metabolism, and nutrition, biology.organism_classification, Rattus norvegicus, digestive system diseases, 030217 neurology & neurosurgery, Reference genome, Norway rat
Abstract

We present a genome assembly from an individual male Rattus norvegicus (the Norway rat; Chordata; Mammalia; Rodentia; Muridae). The genome sequence is 2.44 gigabases in span. The majority of the assembly is scaffolded into 20 chromosomal pseudomolecules, with both X and Y sex chromosomes assembled. This genome assembly, mRatBN7.2, represents the new reference genome for R. norvegicus and has been adopted by the Genome Reference Consortium.

Published
2021

10. The complete genome sequence of Eimeria tenella (Tyzzer 1929), a common gut parasite of chickens

Author

Jonathan Wood, James Torrance, Richard Challis, Michelle Smith, Alexander Dove, Ying Sims, Craig Corton, Matthew Berriman, Shane A. McCarthy, Ulrike Böhme, Kerstin Howe, Michael A. Quail, Adam J. Reid, Emma Betteridge, Alan Tracey, Damer P. Blake, Eerik Aunin, and Karen Oliver

Subjects
Eimeriidae, Whole genome sequencing, Genetics, Apicoplast, biology, genome sequence, food and beverages, Medicine (miscellaneous), Sequence assembly, Articles, Data Note, biology.organism_classification, Eucoccidiorida, Genome, General Biochemistry, Genetics and Molecular Biology, Eimeria, Apicomplexa, parasitic diseases, parasite, chromosomal, protist, Eimeria tenella
Abstract

We present a genome assembly from a clonal population of Eimeria tenella Houghton parasites (Apicomplexa; Conoidasida; Eucoccidiorida; Eimeriidae). The genome sequence is 53.25 megabases in span. The entire assembly is scaffolded into 15 chromosomal pseudomolecules, with complete mitochondrion and apicoplast organellar genomes also present.

Published
2021
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11. The genome sequence of the European robin, Erithacus rubecula Linnaeus 1758

Author

Karen Oliver, Miriam Liedvogel, Emma Betteridge, Kerstin Howe, Sarah Pelan, Craig Corton, James Torrance, Jenny C. Dunn, Ying Sims, Daniel Mead, Jale Dolucan, Michael A. Quail, Shane A. McCarthy, Jason Skelton, Jonathan Wood, Jonathan Threlfall, Richard Challis, Michelle Smith, Mark Blaxter, and Marcela Uliano-Silva

Subjects
Whole genome sequencing, 0303 health sciences, Erithacus, biology, Medicine (miscellaneous), Sequence assembly, biology.organism_classification, European robin, General Biochemistry, Genetics and Molecular Biology, 03 medical and health sciences, 0302 clinical medicine, Evolutionary biology, 030220 oncology & carcinogenesis, biology.animal, C400 Genetics, 030304 developmental biology
Abstract

We present a genome assembly from an individual female Erithacus rubecula (the European robin; Chordata; Aves; Passeriformes; Turdidae). The genome sequence is 1.09 gigabases in span. The majority of the assembly is scaffolded into 36 chromosomal pseudomolecules, with both W and Z sex chromosomes assembled.

Published
2021
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12. The genome sequence of the ringlet, Aphantopus hyperantus Linnaeus 1758

Author

Jonathan Wood, Carla Lohse, Mark Blaxter, Ilik J. Saccheri, Alan Tracey, Dan Mead, Emma Betteridge, Michael A. Quail, Richard Challis, Michelle Smith, Richard Durbin, Craig Corton, James Torrance, Shane A. McCarthy, Karen Oliver, Carl J. Yung, Jale Dolucan, Konrad Lohse, Kerstin Howe, Philip Ashmole, Jason Skelton, Sam Whiteford, Mead, Dan [0000-0001-7717-4330], Dolucan, Jale [0000-0002-3551-1770], Howe, Kerstin [0000-0003-2237-513X], Wood, Jonathan [0000-0002-7545-2162], Torrance, James [0000-0002-6117-8190], Challis, Richard [0000-0002-3502-1122], Durbin, Richard [0000-0002-9130-1006], and Apollo - University of Cambridge Repository

Subjects
genome sequence, viruses, Medicine (miscellaneous), Sequence assembly, 32 Biomedical and Clinical Sciences, aphantopus hyperantus, Biology, Nymphalidae, General Biochemistry, Genetics and Molecular Biology, Lepidoptera genitalia, 03 medical and health sciences, 0302 clinical medicine, Genetics, chromosomal, 030304 developmental biology, Whole genome sequencing, 0303 health sciences, Human Genome, 42 Health Sciences, ringlet butterfly, virus diseases, Chromosome, biochemical phenomena, metabolism, and nutrition, biology.organism_classification, Ringlet, digestive system diseases, Maniola, Evolutionary biology, FOS: Biological sciences, Butterfly, 030217 neurology & neurosurgery, maniola hyperantus
Abstract

We present a genome assembly based on an individual female Aphantopus hyperantus, also known as Maniola hyperantus (the ringlet butterfly; Arthropoda; Insecta; Lepidoptera, Nymphalidae), scaffolded using data from a second, unrelated specimen. The genome sequence is 411 megabases in span. The majority of the assembly is scaffolded into 29 chromosomal pseudomolecules, including the Z sex chromosome.

Published
2021
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13. The genome sequence of the common pipistrelle, Pipistrellus pipistrellus Schreber 1774

Author

Jale Doulcan, Christopher Vine, Michael A. Quail, Kerstin Howe, Ying Sims, Emma C. Teeling, Emma Betteridge, Craig Corton, Richard Challis, Michelle Smith, Mark Blaxter, Daniel Mead, Sarah Pelan, James Torrance, Karen Oliver, Jonathan Threlfall, Jason Skelton, Shane A. McCarthy, and Jonathan Wood

Subjects
Whole genome sequencing, 0303 health sciences, Medicine (miscellaneous), Sequence assembly, Biology, X sex chromosome, biology.organism_classification, General Biochemistry, Genetics and Molecular Biology, 03 medical and health sciences, 0302 clinical medicine, Evolutionary biology, Pipistrellus pipistrellus, 030217 neurology & neurosurgery, 030304 developmental biology
Abstract

We present a genome assembly from an individual female Pipistrellus pipistrellus (the common pipistrelle; Chordata; Mammalia; Chiroptera; Vespertilionidae). The genome sequence is 1.76 gigabases in span. The majority of the assembly is scaffolded into 21 chromosomal pseudomolecules, with the X sex chromosome assembled.

Published
2021
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14. The genome sequence of the eastern grey squirrel, Sciurus carolinensis Gmelin, 1788

Author

James Torrance, Shane A. McCarthy, Alan Tracey, Richard Durbin, Roberto Portela Miguez, Kerstin Howe, Richard Challis, Michelle Smith, Emma Betteridge, Jale Doulcan, Mark Blaxter, Dan Mead, Jason Skelton, Craig Corton, Karen Oliver, Kathryn Fingland, Michael A. Quail, Rachel Cripps, and Ying Sims

Subjects
Whole genome sequencing, 0303 health sciences, Sciurus carolinensis, biology, Medicine (miscellaneous), Sequence assembly, biology.organism_classification, General Biochemistry, Genetics and Molecular Biology, 03 medical and health sciences, 0302 clinical medicine, Eutheria, Evolutionary biology, 030217 neurology & neurosurgery, 030304 developmental biology
Abstract

We present a genome assembly from an individual male Sciurus carolinensis (the eastern grey squirrel; Vertebrata; Mammalia; Eutheria; Rodentia; Sciuridae). The genome sequence is 2.82 gigabases in span. The majority of the assembly (92.3%) is scaffolded into 21 chromosomal-level scaffolds, with both X and Y sex chromosomes assembled.

Published
2020
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