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• In-sewer physiobiochemical processes cause wastewater quality variation. • Microbial activities in stabilized sewer deposits are spatiotemporally organized. • In-sewer processes are intertwined with the dynamic wastewater discharge. • Detection and control of volatile compounds and bioaerosols are still challenging. • Relationships among microbiome, water quality, and sediment erosion are not clear. In-sewer physio-biochemical processes cause significant variations of wastewater quality during conveyance, which affects the influent to a wastewater treatment plant (WWTP) and arguably the microbial community of biological treatment units in a WWTP. In wet weather, contaminants stored in sewer deposits can be resuspended and migrate downstream or be released during combined sewer overflows to the urban water bodies, posing challenges to the treatment facilities or endangering urban water quality. Therefore, in-sewer transformation and migration of contaminants have been extensively studied. The compiled results from representative research in the past few decades showed that biochemical reactions are both cross-sectionally and longitudinally organized in the deposits and the sewage, following the redox potential as well as the sequence of macromolecule/contaminant degradation. The sewage organic contents and sewer biofilm microorganisms were found to covary but more systematic studies are required to examine the temporal stability of the feature. Besides, unique communities can be developed in the sewage phase. The enrichment of the major sewage-associated microorganisms can be explained by the availability of biodegradable organic contents in sewers. The sewer deposits, including biofilms, harbor both microorganisms and contaminants and usually can provide longer residence time for in-sewer transformation than wastewater. However, the interrelationships among contaminant transformation, microorganisms in the deposits/biofilms, and those in the sewage are largely unclear. Specifically, the formation and migration of FOG (fat, oil, and grease) deposits, generation and transport of contaminants in the sewer atmosphere (e.g., H 2 S, CH 4 , volatile organic compounds, bioaerosols), transport and transformation of nonconventional contaminants, such as pharmaceuticals and personal care products, and wastewater quality variation during the biofilm rehabilitation period after damages caused by rains/storms are some topics for future research. Moreover, systematic and standardized field analysis of real sewers under dynamic wastewater discharge conditions is necessary. We believe that an improved understanding of these processes would assist in sewer management and better prepare us for the challenges brought about by climate change and water shortage. [Display omitted] [ABSTRACT FROM AUTHOR]