1. CHARACTERIZATION AND FUNCTIONAL ANNOTATION OF UNIQUE SPECIESSPECIFIC HYPOTHETICAL PROTEINS FROM SOME MASTITIS CAUSING ORGANISMS.
- Author
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Nathawat, Prerna, Purva, Mukul, Gahlot, Kritika, Rathore, Siddharth Singh, and Maherchandani, Sunil
- Subjects
STREPTOCOCCUS agalactiae ,MASTITIS ,SPECIES specificity ,STAPHYLOCOCCUS epidermidis ,ENTEROCOCCUS ,KLEBSIELLA oxytoca ,PASTEURELLA multocida - Abstract
In this study species specific unique Hypothetical Proteins (HPs from 15 mastitis causing organisms viz. Staphylococcus aureus, E. coli, Enterococcus faecalis, Klebsiella pneumoniae, Pasteurella multocida, Pseudomonas aeruginosa, Klebsiella oxytoca, Staphylococcus epidermidis, Staphylococcus hyicus, Staphylococcus haemolyticus, Staphylococcus chromogenes, Streptococcus agalactiae, Streptococcus dysgalactiae, Streptococcus uberis and Enterococcus aerogenes were identified and characterized. The HPs were selected on the basis of their in vivo stability, species specificity and uniqueness. These HP were characterized in silico for their physico-chemical properties and functions. The results showed well-defined functions of the selected HPs and categorized them either as enzyme, transporter and cellular regulatory proteins. Three HPs showed adhesion properties which can be crucial for the persistence of the organisms and pathogenicity. The outcome of the present study gave better understanding of selected HPs whose functions otherwise had not been predicted. Most of the HPs were related to survival or pathogenesis of the bacteria to which they belonged and being unique to a species of bacteria they can further be used as biomarkers for species identification [ABSTRACT FROM AUTHOR]
- Published
- 2020