182 results on '"Suzuki, K"'
Search Results
2. Fermi-Surface Topological Phase Transition and Horizontal Order-Parameter Nodes in CaFe2As2 Under Pressure
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Gonnelli, R. S., Daghero, D., Tortello, M., Ummarino, G. A., Bukowski, Z., Karpinski, J., Reuvekamp, P. G., Kremer, R. K., Profeta, G., Suzuki, K., and Kuroki, K.
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Superconductivity (cond-mat.supr-con) ,Fe-based superconductors ,pressure ,Electronic properties and materials ,Multidisciplinary ,Condensed Matter - Superconductivity ,point-contact spectroscopy ,Superconducting properties and materials ,FOS: Physical sciences ,superconducting order parameter ,Article - Abstract
Iron-based compounds (IBS) display a surprising variety of superconducting properties that seems to arise from the strong sensitivity of these systems to tiny details of the lattice structure. In this respect, systems that become superconducting under pressure, like CaFe2As2, are of particular interest. Here we report on the first directional point-contact Andreev-reflection spectroscopy (PCARS) measurements on CaFe2As2 crystals under quasi-hydrostatic pressure, and on the interpretation of the results using a 3D model for Andreev reflection combined with ab-initio calculations of the Fermi surface (within the density functional theory) and of the order parameter symmetry (within a random-phase-approximation approach in a ten-orbital model). The almost perfect agreement between PCARS results at different pressures and theoretical predictions highlights the intimate connection between the changes in the lattice structure, a topological transition in the holelike Fermi surface sheet, and the emergence on the same sheet of an order parameter with a horizontal node line., Scientific Reports, 6, ISSN:2045-2322
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- 2016
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3. Perpendicular magnetic tunnel junction with a strained Mn-based nanolayer.
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Suzuki, K. Z., Ranjbar, R., Okabayashi, J., Miura, Y., Sugihara, A., Tsuchiura, H., and Mizukami, S.
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- 2016
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4. First evidence of denitrification vis-à-vis monsoon in the Arabian Sea since Late Miocene
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G. P. Gurumurthy, H. Lu, James A Bendle, Boo-Keun Khim, A. Ganesh Kumar, Anil Kumar, Rajeev Saraswat, Giancarlo Scardia, Sophia Aharonovich, Stephan Steinke, H. Liddy, Elizabeth M. Griffith, Girish Kumar Sharma, Mitchell W Lyle, Jongmin Lee, Rakesh Saxena, Z. Xu, Manish Tiwari, Arun Deo Singh, Sergio Andò, Lisa Tauxe, Denise K. Kulhanek, Masao Iwai, Kenta Suzuki, Claire M. Routledge, Ravi Mishra, Peter D. Clift, T. Radhakrishna, Zhaojie Yu, Dhananjai Pandey, Annette Hahn, Shubham Tripathi, Tripathi, S, Tiwari, M, Lee, J, Khim, B, Pandey, D, Clift, P, Kulhanek, D, Andò, S, Bendle, J, Aharonovich, S, Griffith, E, Gurumurthy, G, Hahn, A, Iwai, M, Kumar, A, Ganesh Kumar, A, Liddy, H, Lu, H, Lyle, M, Mishra, R, Radhakrishna, T, Routledge, C, Saraswat, R, Saxena, R, Scardia, G, Sharma, G, Singh, A, Steinke, S, Suzuki, K, Tauxe, L, Xu, Z, Yu, Z, National Centre for Antarctic and Ocean Research, Pusan National University, Louisiana State University, Texas A&M University, University of Milano Bicocca, University of Birmingham, Macquarie University Level 2, University of Texas at Arlington, Manipal University, University of Bremen, Kochi University, Wadia Institute of Himalayan Geology, National Institute of Ocean Technology, University of Southern California, Nanjing University, Oregon State University, National Centre for Earth Science Studies, University College London, National Institute of Oceanography, ONGC 11 High, Universidade Estadual Paulista (UNESP), Kumaun University, Banaras Hindu University, Xiamen University, Hokkaido University, Scripps Institution of Oceanography, Chinese Academy of Sciences, and Université de Paris-Sud (Orsay)
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Monsoon ,Multidisciplinary ,Denitrification ,010504 meteorology & atmospheric sciences ,Arabian Sea ,Late Miocene ,International Ocean Discovery Program ,010502 geochemistry & geophysics ,Oxygen minimum zone ,01 natural sciences ,Article ,IODP ,Oceanography ,Productivity (ecology) ,East Asian Monsoon ,Surface water ,Geology ,0105 earth and related environmental sciences - Abstract
Made available in DSpace on 2022-04-28T19:05:30Z (GMT). No. of bitstreams: 0 Previous issue date: 2017-02-21 In the Arabian Sea, South Asian monsoon (SAM)-induced high surface water productivity coupled with poor ventilation of intermediate water results in strong denitrification within the oxygen minimum zone (OMZ). Despite the significance of denitrification in the Arabian Sea, we have no long-term record of its evolution spanning the past several million years. Here, we present the first record of denitrification evolution since Late Miocene (∼10.2 Ma) in the Eastern Arabian Sea, where the SAM generates moderate surface water productivity, based on the samples retrieved during the International Ocean Discovery Program (IODP) Expedition 355. We find that (i) the SAM was persistently weaker from ∼10.2 to 3.1 Ma; it did not intensify at ∼8 Ma in contrast to a few previous studies, (ii) on tectonic timescale, both the SAM and the East Asian Monsoon (EAM) varied synchronously, (iii) the first evidence of denitrification and productivity/SAM intensification was at ∼3.2-2.8 Ma that coincided with Mid-Pliocene Warm Period (MPWP), and (iv) the modern strength of the OMZ where denitrification is a permanent feature was attained at ∼1.0 Ma. National Centre for Antarctic and Ocean Research Department of Oceanography Pusan National University Department of Geology and Geophysics Louisiana State University, E253 Howe-Russell-Kniffen, Geoscience Complex International Ocean Discovery Program Texas A&M University, 1000 Discovery Drive College Department of Earth and Environmental Sciences University of Milano Bicocca, Piazza della Scienza 4 School of Geography Earth and Environmental Sciences University of Birmingham, Edgbaston Department of Earth and Planetary Sciences Faculty of Science and Engineering Macquarie University Level 2, The Australian Hearing Hub, 16 University Avenue Department of Earth and Environmental Sciences University of Texas at Arlington, Geosciences Building, 500 Yates Street Manipal Centre for Natural Sciences Manipal University, Dr. T.M.A. Pai Planetarium Building MARUM University of Bremen, Leobener Strasse Center for Advanced Marine Core Research/Natural Science Cluster Kochi University, 2-5-1 Akebono-cho Wadia Institute of Himalayan Geology, 33 GMS Road Marine Biotechnology Department National Institute of Ocean Technology, Velachery-Tambaram Main Road Department of Earth Sciences University of Southern California, 3651 Trousdale Parkway School of Geographical and Oceanographical Sciences Nanjing University, 163 Xianlin Avenue College of Earth Ocean and Atmospheric Sciences Oregon State University, 104 CEOAS Administration Building Geosciences Division National Centre for Earth Science Studies University College London, Gower Street Geological Oceanography Division National Institute of Oceanography ONGC 11 High, Bandra-Sion Link Road Instituto de Geociências e Ciências Exatas Universidade Estadual Paulista, 1515 Avenida 24-A Department of Geology Kumaun University Department of Geology Banaras Hindu University Department of Geological Oceanography College of Ocean and Earth Sciences Xiamen University, Xiping Building, Xiang'an South Road Graduate School of Environmental Science Hokkaido University, N10W5, Kita-ku Scripps Institution of Oceanography, 9500 Gilman Drive Key Laboratory of Marine Geology and Environment Institute of Oceanology Chinese Academy of Sciences, 7 Nanhai Road Laboratoire Géosciences Paris-Sud (GEOPS UMR8148-CNRS) Université de Paris-Sud (Orsay), Bâtiment 504 Instituto de Geociências e Ciências Exatas Universidade Estadual Paulista, 1515 Avenida 24-A
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- 2017
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5. Fermi-Surface Topological Phase Transition and Horizontal Order-Parameter Nodes in CaFe2As2 Under Pressure.
- Author
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Gonnelli, R. S., Daghero, D., Tortello, M., Ummarino, G. A., Bukowski, Z., Karpinski, J., Reuvekamp, P. G., Kremer, R. K., Profeta, G., Suzuki, K., and Kuroki, K.
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- 2016
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6. Logistic regression analysis and machine learning for predicting post-stroke gait independence: a retrospective study.
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Miyazaki Y, Kawakami M, Kondo K, Hirabe A, Kamimoto T, Akimoto T, Hijikata N, Tsujikawa M, Honaga K, Suzuki K, and Tsuji T
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- Humans, Female, Male, Aged, Retrospective Studies, Middle Aged, Logistic Models, Algorithms, Stroke Rehabilitation methods, ROC Curve, Prognosis, Aged, 80 and over, Machine Learning, Stroke physiopathology, Stroke complications, Gait physiology
- Abstract
This study investigated whether machine learning (ML) has better predictive accuracy than logistic regression analysis (LR) for gait independence at discharge in subacute stroke patients (n = 843) who could not walk independently at admission. We developed prediction models using LR and five ML algorithms-specifically, the decision tree (DT), support vector machine, artificial neural network, ensemble learning, and k-nearest neighbor methods. Functional Independence Measure sub-items were used to evaluate the ability to walk independently. Model predictive accuracies were evaluated using areas under receiver operating characteristic curves (AUCs) as well as accuracy, precision, recall, F1 score, and specificity. The AUC for DT (0.812) was significantly lower than those for the other algorithms (p < 0.01); however, the AUC for LR (0.895) did not differ significantly from those for the other models (0.893-0.903). Other performance metrics showed no substantial differences between LR and ML algorithms. In conclusion, the DT algorithm had significantly low predictive accuracy, and LR showed no significant difference in predictive accuracy compared with the other ML algorithms. As its predictive accuracy is similar to that of ML, LR can continue to be used for predicting the prognosis of gait independence, with additional advantages of being easily understandable and manually computable., (© 2024. The Author(s).)
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- 2024
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7. Involvement of the splicing factor SART1 in the BRCA1-dependent homologous recombination repair of DNA double-strand breaks.
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Ozaki K, Kato R, Yasuhara T, Uchihara Y, Hirakawa M, Abe Y, Shibata H, Kawabata-Iwakawa R, Shakayeva A, Kot P, Miyagawa K, Suzuki K, Matsuda N, Shibata A, and Yamauchi M
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- Humans, Serine-Arginine Splicing Factors metabolism, Serine-Arginine Splicing Factors genetics, Ataxia Telangiectasia Mutated Proteins metabolism, Ataxia Telangiectasia Mutated Proteins genetics, Phosphorylation, Tumor Suppressor p53-Binding Protein 1 metabolism, Tumor Suppressor p53-Binding Protein 1 genetics, Cell Line, Tumor, Telomere-Binding Proteins metabolism, Telomere-Binding Proteins genetics, Epistasis, Genetic, G2 Phase genetics, DNA Breaks, Double-Stranded, BRCA1 Protein metabolism, BRCA1 Protein genetics, Recombinational DNA Repair
- Abstract
Although previous studies have reported that pre-mRNA splicing factors (SFs) are involved in the repair of DNA double-strand breaks (DSBs) via homologous recombination (HR), their exact role in promoting HR remains poorly understood. Here, we showed that SART1, an SF upregulated in several types of cancer, promotes DSB end resection, an essential first step of HR. The resection-promoting function of SART1 requires phosphorylation at threonine 430 and 695 by ATM/ATR. SART1 is recruited to DSB sites in a manner dependent on transcription and its RS domain. SART1 is epistatic with BRCA1, a major HR factor, in the promotion of resection, especially transcription-associated resection in the G2 phase. SART1 and BRCA1 accumulate at DSB sites in an interdependent manner, and epistatically counteract the resection blockade posed by 53BP1 and RIF1. Furthermore, chromosome analysis demonstrated that SART1 and BRCA1 epistatically suppressed genomic alterations caused by DSB misrepair in the G2 phase. Collectively, these results indicate that SART1 and BRCA1 cooperatively facilitate resection of DSBs arising in transcriptionally active genomic regions in the G2 phase, thereby promoting faithful repair by HR, and suppressing genome instability., (© 2024. The Author(s).)
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- 2024
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8. Optimal conditions of algal breeding using neutral beam and applying it to breed Euglena gracilis strains with improved lipid accumulation.
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Imamura S, Yamada K, Takebe H, Kiuchi R, Iwashita H, Toyokawa C, Suzuki K, Sakurai A, and Takaya K
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- Microalgae genetics, Microalgae radiation effects, Microalgae metabolism, Neutrons, Mutation, Biomass, Lipids, Biofuels, Euglena gracilis genetics, Euglena gracilis radiation effects, Euglena gracilis metabolism, Lipid Metabolism radiation effects, Lipid Metabolism genetics
- Abstract
Microalgae are considered to be more useful and effective to use in biomass production than other photosynthesis organisms. However, microalgae need to be altered to acquire more desirable traits for the relevant purpose. Although neutron radiation is known to induce DNA mutations, there have been few studies on its application to microalgae, and the optimal relationship between irradiation intensity and mutation occurrence has not been established. In this study, using the unicellular red alga Cyanidioschyzon merolae as a model, we analyzed the relationship between the absorbed dose of two types of neutrons, high-energy (above 1 MeV) and thermal (around 25 meV) neutrons, and mutation occurrence while monitoring mutations in URA5.3 gene encoding UMP synthase. As a result, the highest mutational occurrence was observed when the cells were irradiated with 20 Gy of high-energy neutrons and 13 Gy of thermal neutrons. Using these optimal neutron irradiation conditions, we next attempted to improve the lipid accumulation of Euglena gracilis, which is a candidate strain for biofuel feedstock production. As a result, we obtained several strains with a maximum 1.3-fold increase in lipid accumulation compared with the wild-type. These results indicate that microalgae breeding by neutron irradiation is effective., (© 2024. The Author(s).)
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- 2024
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9. Impact of shear stress on sacral pressure injury from table rotation during laparoscopic colorectal surgery performed in the lithotomy position.
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Tatsuta K, Sakata M, Sugiyama K, Kojima T, Akai T, Suzuki K, Torii K, Morita Y, Kikuchi H, Hiramatsu Y, Kurachi K, and Takeuchi H
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- Humans, Female, Male, Aged, Middle Aged, Stress, Mechanical, Rotation, Pressure, Colorectal Surgery adverse effects, Sacrum surgery, Operating Tables, Laparoscopy adverse effects, Laparoscopy methods, Pressure Ulcer etiology, Pressure Ulcer prevention & control, Pressure Ulcer surgery
- Abstract
This study aimed to evaluate the impact of shear stress on surgery-related sacral pressure injury (PI) after laparoscopic colorectal surgery performed in the lithotomy position. We included 37 patients who underwent this procedure between November 2021 and October 2022. The primary outcome was average horizontal shear stress caused by the rotation of the operating table during the operation, and the secondary outcome was interface pressure over time. Sensors were used to measure shear stress and interface pressure in the sacral region. Patients were divided into two groups according to the presence or absence of PI. PI had an incidence of 32.4%, and the primary outcome, average horizontal shear stress, was significantly higher in the PI group than in the no-PI group. The interface pressure increased over time in both groups. At 120 min, the interface pressure was two times higher in the PI group than in the no-PI group (PI group, 221.5 mmHg; no-PI group, 86.0 mmHg; p < 0.01). This study suggested that shear stress resulting from rotation of the operating table in the sacral region by laparoscopic colorectal surgery performed in the lithotomy position is the cause of PI. These results should contribute to the prevention of PI., (© 2024. The Author(s).)
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- 2024
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10. Ensemble detection of hand joint ankylosis and subluxation in radiographic images using deep neural networks.
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Izumi K, Suzuki K, Hashimoto M, Jinzaki M, Ko S, Takeuchi T, and Kaneko Y
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- Humans, Radiography, Hand diagnostic imaging, Finger Joint, Neural Networks, Computer, Ankylosis diagnostic imaging, Joint Dislocations diagnostic imaging
- Abstract
The modified total Sharp score (mTSS) is often used as an evaluation index for joint destruction caused by rheumatoid arthritis. In this study, special findings (ankylosis, subluxation, and dislocation) are detected to estimate the efficacy of mTSS by using deep neural networks (DNNs). The proposed method detects and classifies finger joint regions using an ensemble mechanism. This integrates multiple DNN detection models, specifically single shot multibox detectors, using different training data for each special finding. For the learning phase, we prepared a total of 260 hand X-ray images, in which proximal interphalangeal (PIP) and metacarpophalangeal (MP) joints were annotated with mTSS by skilled rheumatologists and radiologists. We evaluated our model using five-fold cross-validation. The proposed model produced a higher detection accuracy, recall, precision, specificity, F-value, and intersection over union than individual detection models for both ankylosis and subluxation detection, with a detection rate above 99.8% for the MP and PIP joint regions. Our future research will aim at the development of an automatic diagnosis system that uses the proposed mTSS model to estimate the erosion and joint space narrowing score., (© 2024. The Author(s).)
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- 2024
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11. Non-destructive visualization of internal structural changes in humidified magnesium oxide tablets using X-ray computed tomography.
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Amemiya T, Suzuki K, and Tomita T
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- Chemical Phenomena, Tablets chemistry, Humidity, Magnesium Oxide chemistry, Tomography, X-Ray Computed
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Detailed examinations of the internal structure of tablets are imperative for comprehending their formulation, physical attributes, and ensuring their safe utilization. While X-ray computed tomography (CT) is valuable for noninvasively analyzing internal structural changes, the influence of humidity on these structural changes remains unexplored. Accordingly, we aimed to assess the viability of X-ray CT in non-destructively evaluating the internal structure of humidified magnesium oxide (MgO) tablets. MgO tablets were subjected to conditions of 40 °C and 75% humidity for 7 days, weighed pre- and post-humidification, and subsequently stored at room temperature (22-27 °C) until day 90. Their internal structure was evaluated using X-ray CT. We observed a substantial increase in the weight of MgO tablets concomitant with moisture absorption, with minimal changes observed upon storage at room temperature. The skewness reduced immediately post-moisture absorption, remained almost the same post-storage at room temperature, and failed to revert to pre-humidification levels during the storage period. These findings highlight the utility of X-ray CT as an effective tool for non-destructive, three-dimensional, and detailed evaluation of internal structural transformations in MgO tablets., (© 2024. The Author(s).)
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- 2024
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12. Injury-induced cooperation of InhibinβA and JunB is essential for cell proliferation in Xenopus tadpole tail regeneration.
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Nakamura M, Kyoda T, Yoshida H, Takebayashi-Suzuki K, Koike R, Takahashi E, Moriyama Y, Wlizla M, Horb ME, and Suzuki A
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- Animals, Xenopus laevis metabolism, Larva genetics, Cell Proliferation, Tail physiology, Regeneration genetics, Signal Transduction
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In animal species that have the capability of regenerating tissues and limbs, cell proliferation is enhanced after wound healing and is essential for the reconstruction of injured tissue. Although the ability to induce cell proliferation is a common feature of such species, the molecular mechanisms that regulate the transition from wound healing to regenerative cell proliferation remain unclear. Here, we show that upon injury, InhibinβA and JunB cooperatively function for this transition during Xenopus tadpole tail regeneration. We found that the expression of inhibin subunit beta A (inhba) and junB proto-oncogene (junb) is induced by injury-activated TGF-β/Smad and MEK/ERK signaling in regenerating tails. Similarly to junb knockout (KO) tadpoles, inhba KO tadpoles show a delay in tail regeneration, and inhba/junb double KO (DKO) tadpoles exhibit severe impairment of tail regeneration compared with either inhba KO or junb KO tadpoles. Importantly, this impairment is associated with a significant reduction of cell proliferation in regenerating tissue. Moreover, JunB regulates tail regeneration via FGF signaling, while InhibinβA likely acts through different mechanisms. These results demonstrate that the cooperation of injury-induced InhibinβA and JunB is critical for regenerative cell proliferation, which is necessary for re-outgrowth of regenerating Xenopus tadpole tails., (© 2024. The Author(s).)
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- 2024
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13. Surfactant protein D prevents mucin overproduction in airway goblet cells via SIRPα.
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Hata K, Tsubouchi K, Suzuki K, Eto D, Ando H, Yanagihara T, Kan-O K, and Okamoto I
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- Animals, Humans, Mice, Epithelial Cells metabolism, Extracellular Signal-Regulated MAP Kinases metabolism, Goblet Cells metabolism, Mucin 5AC genetics, Mucins, Pulmonary Surfactant-Associated Protein D, Asthma, Pulmonary Disease, Chronic Obstructive
- Abstract
Mucin overproduction is a common feature of chronic airway diseases such as asthma and chronic obstructive pulmonary disease (COPD), and exacerbates their underlying respiratory condition. Surfactant protein D (SP-D) protects against airway diseases through modulation of immune reactions, but whether it also exerts direct effects on airway epithelial cells has remained unclear. Therefore, we sought to investigate the inhibitory role of SP-D on mucin production in airway epithelial cells. We prepared air-liquid interface (ALI) cultures of human primary bronchial epithelial cells (HBECs), which recapitulated a well-differentiated human airway epithelium. Benzo(a)pyrene (BaP), a key toxicant in cigarette smoke, induced mucin 5AC (MUC5AC) production in ALI-cultured HBECs, airway secretory cell lines, and airway epithelia of mice. Then, the protective effects of SP-D against the BaP-induced mucin overproduction were examined. BaP increased MUC5AC production in ALI cultures of HBECs, and this effect was attenuated by SP-D. SP-D also suppressed the BaP-induced phosphorylation of extracellular signal-regulated kinase (ERK) and MUC5AC expression in NCI-H292 goblet-like cells, but not in NCI-H441 club-like cells. Signal regulatory protein α (SIRPα) was found to be expressed in HBECs and NCI-H292 cells but absent in NCI-H441 cells. In NCI-H292 cells, SP-D activated SH2 domain-containing tyrosine phosphatase-1 (SHP-1), downstream of SIRPα, and knockdown of SIRPα abolished the suppressive effects of SP-D on BaP-induced ERK phosphorylation and MUC5AC production. Consistent with these in vitro findings, intratracheal instillation of SP-D prevented the BaP-induced phosphorylation of ERK and Muc5ac expression in airway epithelial cells in a mouse model. SP-D acts directly on airway epithelial cells to inhibit mucin secretion through ligation of SIRPα and SHP-1-mediated dephosphorylation of ERK. Targeting of SIRPα is therefore a potential new therapeutic approach to suppression of mucin hypersecretion in chronic airway diseases such as COPD and asthma., (© 2024. The Author(s).)
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- 2024
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14. Comparative analysis of hyperfibrinolysis with activated coagulation between amniotic fluid embolism and severe placental abruption.
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Ide R, Oda T, Todo Y, Kawai K, Matsumoto M, Narumi M, Kohmura-Kobayashi Y, Furuta-Isomura N, Yaguchi C, Uchida T, Suzuki K, Kanayama N, Itoh H, and Tamura N
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- Female, Humans, Pregnancy, Fibrinolysin metabolism, Tissue Plasminogen Activator, Placenta metabolism, Fibrinolysis physiology, Embolism, Amniotic Fluid, Abruptio Placentae, Blood Coagulation Disorders, Carboxypeptidase B2
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Amniotic fluid embolism (AFE) and placental abruption (PA) are typical obstetric diseases associated with disseminated intravascular coagulation (DIC). AFE is more likely to be complicated with enhanced fibrinolysis than PA. AFE may have an additional mechanism activating fibrinolytic cascade. We aimed to compare the coagulation/fibrinolysis factors among AFE, PA, and peripartum controls. We assessed AFE cases registered in the Japanese AFE Registry, and PA cases complicated with DIC (severe PA) and peripartum controls recruited at our hospital. The following factors in plasma were compared: prothrombin fragment 1 + 2 (PF1 + 2), plasmin α2-plasmin inhibitor complex (PIC), tissue factor (TF), tissue plasminogen activator (tPA), annexin A2 (AnnA2), total thrombin activatable fibrinolysis inhibitor (TAFI) including its activated form (TAFIa), and plasminogen activator inhibitor-type 1 (PAI-1). PF1 + 2 and PIC were markedly increased in both AFE (n = 27) and severe PA (n = 12) compared to controls (n = 23), without significant difference between those disease groups; however, PIC in AFE showed a tendency to elevate relative to PF1 + 2, compared with severe PA. AFE had significantly increased tPA and decreased total TAFI levels compared with severe PA and controls, which might be associated with further plasmin production in AFE and underlie its specific fibrinolytic activation pathway., (© 2024. The Author(s).)
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- 2024
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15. Assessment of the renal angina index in patients hospitalized in a cardiac intensive care unit.
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Sakaguchi E, Naruse H, Ishihara Y, Hattori H, Yamada A, Kawai H, Muramatsu T, Tsuboi Y, Fujii R, Suzuki K, Ishii J, Saito K, Sarai M, Yanase M, Ozaki Y, and Izawa H
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- Child, Humans, Aged, Prospective Studies, Intensive Care Units, Creatinine, Critical Illness, Risk Factors, Intensive Care Units, Pediatric, Acute Kidney Injury etiology
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The renal angina index (RAI) is a validated scoring tool for predicting acute kidney injury (AKI). We investigated the efficacy of the RAI in 2436 heterogeneous patients (mean age, 70 years) treated in cardiac intensive care units (CICUs). The RAI was calculated from creatinine and patient condition scores. AKI was diagnosed by the Kidney Disease: Improving Global Outcome criteria. The primary and secondary endpoints were the development of severe AKI and all-cause mortality, respectively. Four hundred thirty-three patients developed AKI, 87 of them severe. In multivariate analyses, the RAI was a significant independent predictor of severe AKI. During the 12-month follow-up period, 210 patients suffered all-cause death. Elevated RAI was independently associated with all-cause mortality, as was NT-proBNP (p < 0.001). The RAI is a potent predictor not only of severe AKI but also of adverse outcomes and substantially improved the 12-month risk stratification of patients hospitalized in CICUs., (© 2024. The Author(s).)
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- 2024
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16. A novel deep learning model for a computed tomography diagnosis of coronary plaque erosion.
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Park S, Yuki H, Niida T, Suzuki K, Kinoshita D, McNulty I, Broersen A, Dijkstra J, Lee H, Kakuta T, Ye JC, and Jang IK
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- Humans, Coronary Angiography methods, Tomography, X-Ray Computed, Coronary Vessels diagnostic imaging, Coronary Artery Disease diagnostic imaging, Deep Learning, Plaque, Atherosclerotic diagnostic imaging
- Abstract
Patients with acute coronary syndromes caused by plaque erosion might be managed conservatively without stenting. Currently, the diagnosis of plaque erosion requires an invasive imaging procedure. We sought to develop a deep learning (DL) model that enables an accurate diagnosis of plaque erosion using coronary computed tomography angiography (CTA). A total of 532 CTA scans from 395 patients were used to develop a DL model: 426 CTA scans from 316 patients for training and internal validation, and 106 separate scans from 79 patients for validation. Momentum Distillation-enhanced Composite Transformer Attention (MD-CTA), a novel DL model that can effectively process the entire set of CTA scans to diagnose plaque erosion, was developed. The novel DL model, compared to the convolution neural network, showed significantly improved AUC (0.899 [0.841-0.957] vs. 0.724 [0.622-0.826]), sensitivity (87.1 [70.2-96.4] vs. 71.0 [52.0-85.8]), and specificity (85.3 [75.3-92.4] vs. 68.0 [56.2-78.3]), respectively, for the patient-level prediction. Similar results were obtained at the slice-level prediction AUC (0.897 [0.890-0.904] vs. 0.757 [0.744-0.770]), sensitivity (82.2 [79.8-84.3] vs. 68.9 [66.2-71.6]), and specificity (80.1 [79.1-81.0] vs. 67.3 [66.3-68.4]), respectively. This newly developed DL model enables an accurate CT diagnosis of plaque erosion, which might enable cardiologists to provide tailored therapy without invasive procedures.Clinical Trial Registration: http://www.clinicaltrials.gov , NCT04523194., (© 2023. The Author(s).)
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- 2023
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17. Fine-grained interplanetary dust input during the Turonian (Late Cretaceous): evidence from osmium isotope and platinum group elements.
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Matsumoto H, Ishikawa A, Coccioni R, Frontalini F, and Suzuki K
- Abstract
The Turonian age (~ 90-94 Ma) was the hottest geological interval in the Cretaceous and also marked by the K3 event, a pronounced enrichment of
3 He in pelagic sediments (i.e., massive input of extraterrestrial materials). Here, we present Os isotopic (187 Os/188 Os) and platinum group element (PGE) data from Turonian sedimentary records. After a sharp unradiogenic shift during the end-Cenomanian oceanic anoxic event 2, the187 Os/188 Os ratios declined continuously throughout the Turonian, which could be ascribed to the formations of several large igneous provinces (LIPs). Because the interval with the most unradiogenic187 Os/188 Os ratios (i.e., enhanced LIP volcanism) does not correspond to the warmest interval during the mid-Cretaceous, additional sources of CO2 , such as subduction zone volcanism or the kimberlite formation, may explain the Cretaceous Thermal Maximum. As Os isotope ratios do not show any sharp unradiogenic shifts and PGE concentrations do not exhibit a pronounced enrichment, an influx of fine-grained cosmic dust to the Earth's surface, possibly from the long-period comet showers, can be inferred at the time of the3 He enrichment during the mid-Turonian K3 event. Our findings highlight the different behaviors of3 He and PGE information in the sedimentary rocks during the input of fined-grained extraterrestrial materials., (© 2023. The Author(s).)- Published
- 2023
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18. Antiproliferative effects of D-allose associated with reduced cell division frequency in glioblastoma.
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Suzuki K, Ogawa D, Kanda T, Fujimori T, Shibayama Y, Rahman A, Ye J, Ohsaki H, Akimitsu K, Izumori K, Tamiya T, Nishiyama A, and Miyake K
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- Humans, Cell Proliferation, Glucose metabolism, Cell Division, Apoptosis, Cell Line, Tumor, Glioblastoma drug therapy, Carcinoma, Non-Small-Cell Lung, Lung Neoplasms, Liver Neoplasms
- Abstract
Recent studies have shown that D-allose, a rare sugar, elicits antitumor effects on different types of solid cancers, such as hepatocellular carcinoma, non-small-cell lung cancer, and squamous cell carcinoma of the head and neck. In this study, we examined the effects of D-allose on the proliferation of human glioblastoma (GBM) cell lines (i.e., U251MG and U87MG) in vitro and in vivo and the underlying mechanisms. D-allose treatment inhibited the proliferation of U251MG and U87MG cells in a dose-dependent manner (3-50 mM). However, D-allose treatment did not affect cell cycles or apoptosis in these cells but significantly decreased the cell division frequency in both GBM cell lines. In a subcutaneous U87MG cell xenograft model, intraperitoneal injection of D-allose (100 mg/kg/day) significantly reduced the tumor volume in 28 days. These data indicate that D-allose-induced reduction in cell proliferation is associated with a subsequent decrease in the number of cell divisions, independent of cell-cycle arrest and apoptosis. Thus, D-allose could be an attractive additive to therapeutic strategies for GBM., (© 2023. The Author(s).)
- Published
- 2023
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19. Development of a mobile laboratory system in hydrogen fuel cell buses and evaluation of the performance for COVID-19 RT-PCR testing.
- Author
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Okude M, Suzuki K, Naito A, Ebashi A, Kusama T, Kiyotaki J, Akashi Y, Kiyasu Y, Kurihara Y, Notake S, Takanashi M, Setoyama T, Kawakami Y, and Suzuki H
- Subjects
- Humans, SARS-CoV-2 genetics, COVID-19 Nucleic Acid Testing, COVID-19 Testing, Motor Vehicles, Sensitivity and Specificity, COVID-19 diagnosis
- Abstract
We designed and developed two new types of hydrogen fuel cell (HFC) buses (motorcoach and minibus) with a mobile laboratory system. Feasibility studies have been performed for mobile laboratory testing, particularly for the laboratory performance of COVID-19 RT-PCR (PCR). We evaluated the driving range capability, PCR sample size capacity, turnaround time (TAT), and analytical performance for the detection of SARS-CoV-2. Saliva samples were used for the current study, and the analytical performance was compared with that of the reference PCR. The estimated driving range and sample size capacity of the HFC and HFC minibus were 432 km and 2847 samples, respectively, for the HFC motorcoach and 313 km and 1949 samples for the HFC minibus. For the TAT, the median time between sample submission and completion of PCR was 86 min for the motorcoach and 76 min for the minibus, and the median time between sample submission and electronic reporting of the result to each visitor was 182 min for the motorcoach and 194 min for the minibus. A secondary analysis of 1574 HFC mobile laboratory testing samples was conducted, and all negative samples were found to be negative by reference PCR. Furthermore, all samples were confirmed to be positive by reference PCR or other molecular examinations., (© 2023. Springer Nature Limited.)
- Published
- 2023
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20. Investigation of the relationship between intradialytic hypotension during hemodialysis and serum syndecan-1 concentration.
- Author
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Oiwa H, Okada H, Suzuki K, Sumi K, Yoshida S, Suzuki K, Ishihara T, Kitagaki H, Kimura K, Naito Y, Chiba N, Kuroda A, Uchida A, Fukuda H, Kawasaki Y, Minamiyama T, Nishio A, Shimada T, Kamidani R, Miura T, Tochibora R, Yamamoto S, Kinomura Y, Kitagawa Y, Fukuta T, Miyake T, Yoshida T, Suzuki A, Tetsuka N, Tomita H, Nawa T, and Ogura S
- Subjects
- Humans, Retrospective Studies, Endothelial Cells, Renal Dialysis adverse effects, Syndecan-1, Hypotension etiology
- Abstract
Intradialytic hypotension and arrhythmias are complications of hemodialysis. They are associated with decreased intravascular volume due to reduced ultrafiltration volume, cardiac function, and arterial tone. The vascular endothelial glycocalyx, which exists on the surface of healthy vascular endothelial cells and maintains vascular permeability, has been suggested to be impaired by hemodialysis. This single-center retrospective study evaluated the association between syndecan-1, an endothelial glycocalyx dysfunction marker, and complications of hemodialysis. We enrolled 92 patients who underwent outpatient hemodialysis at Gifu Seiryu Hospital from April to July 2022 (346 hemodialysis sessions). The median duration and time of hemodialysis were 40 months and 4.1 h, respectively. Median serum syndecan-1 levels were 67.7 ng/mL before and 98.3 ng/mL after hemodialysis. Hemodialysis complications were noted in 68 sessions, all of which were hypotension. No correlation between pre-hemodialysis syndecan-1 levels and the incidence of complications was observed. However, a positive correlation between the amount of change in syndecan-1 levels before and after hemodialysis and the incidence of hemodialysis complications was noted. Conversely, syndecan-1 levels did not correlate with brain or atrial natriuretic peptides, suggesting that impairment of the vascular endothelial glycocalyx may be a possible cause of intradialytic hypotension and may be useful in preventing intradialytic hypotension., (© 2023. Springer Nature Limited.)
- Published
- 2023
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21. Qualitative study of the association between psychosocial health and physical activity/sleep quality in toddlers.
- Author
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Tsuyuki C, Suzuki K, Seo K, Ke D, Tsuge K, Deng P, Lu D, and Naito H
- Subjects
- Female, Humans, Child, Preschool, Retrospective Studies, China epidemiology, Exercise, Sleep Quality, Sleep
- Abstract
Physical activity and sleep are important factors of mental and physical health in children, with some reports indicating that their effects can persist into adulthood. However, there is limited research on the qualitative aspects of physical activity and sleep in preschool children, particularly in those aged < 3 years. Therefore, to elucidate the association between psychosocial health and physical activity/sleep in early childhood in terms of qualitative aspects, we conducted a retrospective cohort study in 2985 3-year-old children (37.2 ± 0.75 months) in Shanghai, China. An analysis using structural equation modeling indicated that current physical activity had a direct and moderate impact on current psychosocial health evaluated using the Strength and Difficulties Questionnaire. In particular, past physical activity had an indirect and mild effect on current psychosocial health via current physical activity in girls. However, regardless of sex, past sleep quality had slight impact on current psychosocial health, not only indirectly via current sleep quality, but also directly. These findings highlight the importance of considering the qualitative aspects of physical activity and sleep quality as significant factors influencing the current and future psychosocial health of children, even at a very early age (< 3 years)., (© 2023. Springer Nature Limited.)
- Published
- 2023
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22. Comparing the contribution of each clinical indicator in predictive models trained on 980 subacute stroke patients: a retrospective study.
- Author
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Miyazaki Y, Kawakami M, Kondo K, Tsujikawa M, Honaga K, Suzuki K, and Tsuji T
- Subjects
- Humans, Retrospective Studies, Hand Strength, Hospitalization, Life Style, Body Fluids, Stroke diagnosis
- Abstract
Post-stroke disability affects patients' lifestyles after discharge, and it is essential to predict functional recovery early in hospitalization to allow time for appropriate decisions. Previous studies reported important clinical indicators, but only a few clinical indicators were analyzed due to insufficient numbers of cases. Although review articles can exhaustively identify many prognostic factors, it remains impossible to compare the contribution of each predictor. This study aimed to determine which clinical indicators contribute more to predicting the functional independence measure (FIM) at discharge by comparing standardized coefficients. In this study, 980 participants were enrolled to build predictive models with 32 clinical indicators, including the stroke impairment assessment set (SIAS). Trunk function had the most significant standardized coefficient of 0.221. The predictive models also identified easy FIM sub-items, SIAS, and grip strength on the unaffected side as having positive standardized coefficients. As for the predictive accuracy of this model, R
2 was 0.741. This is the first report that included FIM sub-items separately in post-stroke predictive models with other clinical indicators. Trunk function and easy FIM sub-items were included in the predictive model with larger positive standardized coefficients. This predictive model may predict prognosis with high accuracy, fewer clinical indicators, and less effort to predict., (© 2023. The Author(s).)- Published
- 2023
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23. Operando ESR observation in thermally activated delayed fluorescent organic light-emitting diodes.
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Yumoto S, Katsumata J, Osawa F, Wada Y, Suzuki K, Kaji H, and Marumoto K
- Abstract
Organic light-emitting diodes (OLEDs) using thermally activated delayed fluorescence (TADF) materials have advantages over OLEDs using conventional fluorescent materials or high-cost phosphorescent materials, including higher efficiency and lower cost. To attain further high device performance, clarifying internal charge states in OLEDs at a microscopic viewpoint is crucial; however, only a few such studies have been performed. Here, we report a microscopic investigation into internal charge states in OLEDs with a TADF material by electron spin resonance (ESR) at a molecular level. We observed operando ESR signals of the OLEDs and identified their origins due to a hole-transport material PEDOT:PSS, gap states at an electron-injection layer, and a host material CBP in the light-emitting layer by performing density functional theory calculation and studying thin films used in the OLEDs. The ESR intensity varied with increasing applied bias before and after the light emission. We find leakage electrons in the OLED at a molecular level, which is suppressed by a further electron-blocking layer MoO
3 between the PEDOT:PSS and light-emitting layer, resulting in the enhancement of luminance with a low-voltage drive. Such microscopic information and applying our method to other OLEDs will further improve the OLED performance from the microscopic viewpoint., (© 2023. The Author(s).)- Published
- 2023
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24. Cellular immunity reflects the persistent symptoms among COVID-19 recovered patients in Japan.
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Miyata Y, Suzuki K, Nagano T, Iida K, Hasegawa T, Uga H, and Matsuoka H
- Subjects
- Humans, Retrospective Studies, Japan epidemiology, Ligands, Immunity, Cellular, Interleukin-6, Vascular Endothelial Growth Factor A, COVID-19
- Abstract
Coronavirus disease (COVID-19) often causes persistent symptoms long after infection, referred to as "long COVID" or post-acute COVID-19 syndrome (PACS). This phenomenon has been studied primarily concerning B-cell immunity, while the involvement of T-cell immunity is still unclear. This retrospective study aimed to examine the relationship among the number of symptoms, cytokine levels, and the Enzyme-linked immunosorbent spot (ELISPOT) assay data in patients with COVID-19. To examine inflammatory conditions, plasma interleukin (IL)-6, IL-10, IL-18, chemokine ligand 9 (CXCL9), chemokine ligand 3 (CCL3), and vascular endothelial growth factor (VEGF) levels were analyzed using plasma obtained from COVID-19 recovery patients and healthy controls (HC). These levels were significantly higher in the COVID-19 group than those in the HC group. ELISPOT assays were performed to investigate the correlation between COVID-19 persistent symptoms and T-cell immunity. Cluster analysis of ELISPOT categorized COVID-19 recovery patients in the ELISPOT-high and -low groups, based on the values of S1, S2, and N. The number of persistent symptoms was significantly higher in the ELISPOT-low group than those in the ELISPOT-high group. Thus, T cell immunity is critical for the rapid elimination of COVID-19 persistent symptoms, and its measurement immediately after COVID-19 recovery might predict long-term COVID-19 or PACS., (© 2023. The Author(s).)
- Published
- 2023
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25. Wound healing responses of urinary extravasation after urethral injury.
- Author
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Hyuga T, Fujimoto K, Hashimoto D, Tanabe K, Kubo T, Nakamura S, Ueda Y, Fujita-Jimbo E, Muramatsu K, Suzuki K, Osaka H, Asamura S, Moriya K, Nakai H, and Yamada G
- Subjects
- Animals, Mice, Urethra, Cell Proliferation, Wound Healing, Urethral Stricture, Body Fluids
- Abstract
The post-surgical fluid leakage from the tubular tissues is a critical symptom after gastrointestinal or urinary tract surgeries. Elucidating the mechanism for such abnormalities is vital in surgical and medical science. The exposure of the fluid such as peritonitis due to urinary or gastrointestinal perforation has been reported to induce severe inflammation to the surrounding tissue. However, there have been no reports for the tissue responses by fluid extravasation and assessment of post-surgical and injury complication processes is therefore vital. The current model mouse study aims to investigate the effect of the urinary extravasation of the urethral injuries. Analyses on the urinary extravasation affecting both urethral mesenchyme and epithelium and the resultant spongio-fibrosis/urethral stricture were performed. The urine was injected from the lumen of urethra exposing the surrounding mesenchyme after the injury. The wound healing responses with urinary extravasation were shown as severe edematous mesenchymal lesions with the narrow urethral lumen. The epithelial cell proliferation was significantly increased in the wide layers. The mesenchymal spongio-fibrosis was induced by urethral injury with subsequent extravasation. The current report thus offers a novel research tool for surgical sciences on the urinary tract., (© 2023. The Author(s).)
- Published
- 2023
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26. New insights into raceway cultivation of Euglena gracilis under long-term semi-continuous nitrogen starvation.
- Author
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Bakku RK, Yamamoto Y, Inaba Y, Hiranuma T, Gianino E, Amarianto L, Mahrous W, Suzuki H, and Suzuki K
- Subjects
- Photosynthesis, Biomass, Euglena gracilis
- Abstract
This study aimed to investigate the physiological responses of Euglena gracilis (E. gracilis) when subjected to semicontinuous N-starvation (N-) for an extended period in open ponds. The results indicated that the growth rates of E. gracilis under the N- condition (11 ± 3.3 g m
-2 d-1 ) were higher by 23% compared to the N-sufficient (N+, 8.9 ± 2.8 g m-2 d-1 ) condition. Furthermore, the paramylon content of E.gracilis was above 40% (w/w) of dry biomass in N- condition compared to N+ (7%) condition. Interestingly, E. gracilis exhibited similar cell numbers regardless of nitrogen concentrations after a certain time point. Additionally, it demonstrated relatively smaller cell size over time, and unaffected photosynthetic apparatus under N- condition. These findings suggest that there is a tradeoff between cell growth and photosynthesis in E. gracilis, as it adapts to semi-continuous N- conditions without a decrease in its growth rate and paramylon productivity. Notably, to the author's knowledge, this is the only study reporting high biomass and product accumulation by a wild-type E. gracilis strain under N- conditions. This newly identified long-term adaptation ability of E. gracilis may offer a promising direction for the algal industry to achieve high productivity without relying on genetically modified organisms., (© 2023. The Author(s).)- Published
- 2023
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27. Estimation of silent phenotypes of calf antibiotic dysbiosis.
- Author
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Okada S, Inabu Y, Miyamoto H, Suzuki K, Kato T, Kurotani A, Taguchi Y, Fujino R, Shiotsuka Y, Etoh T, Tsuji N, Matsuura M, Tsuboi A, Saito A, Masuya H, Kikuchi J, Nagasawa Y, Hirose A, Hayashi T, Ohno H, and Takahashi H
- Subjects
- Animals, Cattle, Dysbiosis, Feces microbiology, Bacteria, Butyrates, Animal Feed analysis, Diet veterinary, Anti-Bacterial Agents pharmacology, Chlortetracycline pharmacology
- Abstract
Reducing antibiotic usage among livestock animals to prevent antimicrobial resistance has become an urgent issue worldwide. This study evaluated the effects of administering chlortetracycline (CTC), a versatile antibacterial agent, on the performance, blood components, fecal microbiota, and organic acid concentrations of calves. Japanese Black calves were fed with milk replacers containing CTC at 10 g/kg (CON group) or 0 g/kg (EXP group). Growth performance was not affected by CTC administration. However, CTC administration altered the correlation between fecal organic acids and bacterial genera. Machine learning (ML) methods such as association analysis, linear discriminant analysis, and energy landscape analysis revealed that CTC administration affected populations of various types of fecal bacteria. Interestingly, the abundance of several methane-producing bacteria at 60 days of age was high in the CON group, and the abundance of Lachnospiraceae, a butyrate-producing bacterium, was high in the EXP group. Furthermore, statistical causal inference based on ML data estimated that CTC treatment affected the entire intestinal environment, potentially suppressing butyrate production, which may be attributed to methanogens in feces. Thus, these observations highlight the multiple harmful impacts of antibiotics on the intestinal health of calves and the potential production of greenhouse gases by calves., (© 2023. The Author(s).)
- Published
- 2023
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28. Creation of low cost, simple, and easy-to-use training kit for the dura mater suturing in endoscopic transnasal pituitary/skull base surgery.
- Author
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Hattori Y, Ishisaka E, Tahara S, Suzuki K, Teramoto S, and Morita A
- Subjects
- Humans, Endoscopy, Dura Mater surgery, Sutures, Skull Base surgery, Neurosurgical Procedures, Pituitary Diseases surgery
- Abstract
Training kits for laparoscopes for deep suturing under endoscopes are commercially available; however, previously reported training kits for endoscopic transnasal transsphenoidal pituitary/skull base surgery (eTSS) were not available in the market. Moreover, the previously reported low cost, self-made kit has the drawback of being unrealistic. This study aimed to create a low cost training kit for eTSS dura mater suturing that was as close to real as possible. Most necessary items were obtained from the 100-yen store ($1 store) or from everyday supplies. As an alternative to the endoscope, a stick-type camera was used. Through the assembly of the materials, a simple and easy-to-use training kit was created, which is almost identical to the actual dural suturing situation. In eTSS, a simple and easy-to-use training kit for dural suturing was successfully created at a low cost. This kit is expected to be used for deep suture operations and the development of surgical instruments for training., (© 2023. The Author(s).)
- Published
- 2023
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29. Impact of coronavirus disease 2019 pandemic on breast cancer surgery using the National Database of Japan.
- Author
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Fujita M, Hashimoto H, Nagashima K, Suzuki K, Kasai T, Yamaguchi K, Onouchi Y, Sato D, Fujisawa T, and Hata A
- Subjects
- Humans, Aged, Female, Mastectomy, Sentinel Lymph Node Biopsy methods, Japan epidemiology, Pandemics, Lymphatic Metastasis pathology, Neoplasm Staging, Lymph Node Excision, Axilla pathology, Breast Neoplasms epidemiology, Breast Neoplasms surgery, Breast Neoplasms pathology, COVID-19 epidemiology, COVID-19 pathology
- Abstract
Various countries have reported a decrease in breast cancer surgeries during the coronavirus disease 2019 (COVID-19) pandemic; however, inconsistent results have been reported in Japan. This study revealed changes in the number of surgeries during the pandemic using the National Database of Health Insurance Claims and Specific Health Checkups of Japan (NDB) from January 2015 to January 2021, where insurance claims data from Japan as a whole are comprehensively accumulated. The number of breast-conserving surgeries (BCS) without axillary lymph node dissection (ALND) significantly decreased in July (- 846; 95% confidence interval (CI) - 1190 to - 502) and October 2020 (- 540; 95% CI - 861 to - 218). No decrease was observed for other types of surgery, BCS with ALND, and mastectomy with or without ALND. In the age-specific subgroup analysis, significant and transient reduction in BCS without ALND was observed in all age groups (0-49, 50-69, and ≥ 70 years). The number of BCS without ALND significantly decreased for a relatively short period in the early pandemic stages, suggesting reduced surgery for patients with a relatively low stage of cancer. Some patients with breast cancer might have been left untreated during the pandemic, and an unfavorable prognosis would be a concern., (© 2023. The Author(s).)
- Published
- 2023
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- View/download PDF
30. Circulating tumor DNA in molecular assessment feasibly predicts early progression of pancreatic cancer that cannot be identified via initial imaging.
- Author
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Watanabe F, Suzuki K, Aizawa H, Endo Y, Takayama Y, Kakizawa N, Kato T, Noda H, and Rikiyama T
- Subjects
- Humans, Prognosis, Biomarkers, Tumor genetics, Mutation, Pancreatic Neoplasms, Circulating Tumor DNA genetics, Pancreatic Neoplasms diagnostic imaging, Pancreatic Neoplasms genetics
- Abstract
Molecular assessment using circulating tumor DNA (ctDNA) has not been well-defined. We recruited 61 pancreatic cancer (PC) patients who underwent initial computed tomography (CT) imaging study during first-line chemotherapy. Initial molecular assessment was performed using droplet digital PCR and defined as the change in KRAS-mutated ctDNA before and after treatments, which was classified into five categories: mNT, molecular negative; mCR, complete response; mPR, partial response; mSD, stable disease; mPD, progressive disease. Of 61 patients, 14 diagnosed with PD after initial CT imaging showed significantly worse therapeutic outcomes than 47 patients with disease control. In these 47 patients, initial molecular assessment exhibited significant differences in therapeutic outcomes between patients with and without ctDNA (mPD + mSD vs. mCR + mNT; 13.2 M vs. 21.7 M, P = 0.0029) but no difference between those with mPD and mSD + mCR + mNT, suggesting that the presence of ctDNA had more impact on the therapeutic outcomes than change in its number. Multivariate analysis revealed that it was the only independent prognostic factor (P = 0.0405). The presence of ctDNA in initial molecular assessment predicted early tumor progression and identified PC patients more likely to benefit from chemotherapy., (© 2023. The Author(s).)
- Published
- 2023
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31. A millimeter-wave automotive radar with high angular resolution for identification of closely spaced on-road obstacles.
- Author
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Sun R, Suzuki K, Owada Y, Takeda S, Umehira M, Wang X, and Kuroda H
- Abstract
Frequency-modulated continuous wave radar techniques typically have inadequate angular resolutions due to the limited aperture sizes of antenna arrays in spite of employing multiple-input multiple-output (MIMO) techniques. Therefore, despite the existence of multiple objects, angularly close objects with similar distances and relative velocities are recognized as one single object. Autonomous driving requires the accurate recognition of road conditions. This requirement is one of the critical issues to be solved to distinguish significantly close objects. This paper proposes a technique referred to as an antenna element space pseudo-peak suppressing (APPS) method to resolve angularly close targets. The proposed APPS method aims to identify closely spaced objects on roads. These angularly close targets cause a single peak in a spatial spectrum obtained by a beamformer-based angle estimation. The APPS considers this single peak as pseudo. The APPS radar cancels this pseudo peak from the spatial spectrum. Then, the obtained residual received signal is analyzed. With these procedures, the APPS identifies the number of targets. The APPS also estimates the target angles. The proposed APPS is experimentally validated using a typical single-chip MIMO-based radar evaluation board with three transmit (TX) and four receive (RX) antennas. The experimental results confirm that the proposed APPS successfully resolves angularly close pseudo targets with an angle difference of approximately [Formula: see text]., (© 2023. The Author(s).)
- Published
- 2023
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- View/download PDF
32. Association between pazopanib exposure and safety in Japanese patients with renal cell carcinoma or soft tissue sarcoma.
- Author
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Aoyama T, Nakano K, Yuasa T, Sugiyama E, Okawa T, Ito K, Azuma K, Hashimoto K, Furutani R, Hiraide M, Kobayashi K, Suzuki K, Tomomatsu J, Tajima M, Sato H, Hama T, and Takahashi S
- Subjects
- Humans, East Asian People, Indazoles therapeutic use, Angiogenesis Inhibitors therapeutic use, Carcinoma, Renal Cell drug therapy, Carcinoma, Renal Cell pathology, Sarcoma drug therapy, Soft Tissue Neoplasms drug therapy, Kidney Neoplasms drug therapy, Kidney Neoplasms chemically induced
- Abstract
The safety and effectiveness of pazopanib are related to plasma trough concentrations in renal cell carcinoma (RCC); however, data on pazopanib plasma trough concentrations with soft tissue sarcoma (STS) are limited. This study investigated the relationship between plasma trough concentrations and pazopanib safety in 45 Japanese patients with RCC or STS. Among the 33 patients included, the median pazopanib trough concentration was 37.5 (range, 12.1-67.6) µg/mL, which was not significantly different between Japanese RCC and STS patients. The plasma trough concentrations showed significant and positive correlations with aspartate aminotransferase and alanine aminotransferase values in blood samples taken for pharmacokinetic measurements after the administration. The incidence of pazopanib treatment discontinuation were significantly higher in RCC patients (p = 0.027). The primary reason for treatment discontinuation was hepatic dysfunction (5/6, 83.3%). Furthermore, this study revealed that pazopanib trough concentration was affected significantly by proton pump inhibitors but not by histamine 2-receptor blockers. In conclusion, the observed pazopanib trough levels and their safety in the Japanese RCC and STS populations in this study were similar to those of the global population. This is the first study to correlate the hepatotoxicity and pharmacokinetic property of pazopanib plasma trough levels by comparing Japanese patients with RCC or STS., (© 2023. The Author(s).)
- Published
- 2023
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- View/download PDF
33. Accuracy of breathing and radial pulse assessment by non-medical persons: an observational cross-sectional study.
- Author
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Suzuki K, Sakaniwa R, Endo N, Kubota M, Nakazawa M, Narikawa K, Ogawa S, and Yokota H
- Subjects
- Humans, Cross-Sectional Studies, Heart Rate, Radial Artery, Respiration, Respiratory Rate
- Abstract
Early recognition of cardiopulmonary arrest (CPA) expedites emergency calls and resuscitation and improves the survival rate of unresponsive individuals. However, the accuracy of breathing and radial artery pulse assessment by non-medical persons is poorly understood. The aim of this study was to determine the accuracy of breathing assessment and radial pulse palpation among 450 non-medical personnel using a high-fidelity simulator. We examined the accuracy of 10 second's assessment for breathing and radial pulse using a high-fidelity mannequin simulator, included 496 non-medical participants (school teachers) between 2016-2018. For a primary results, the sensitivity for the detection of the presence of the breathing and radial pulse was 96.2% (97.5% for sensitivity and 92.0% for specificity) and 91.7% (99.1% for sensitivity and 56.8% for specificity), respectively. Futher, breathing rate and radial pulse rate were strongly correlated with the assessments, with Spearman's correlation coefficients of 0.813 (P < 0.001) and 0.719 (P < 0.001), respectively. In contrast, radial pulse strength was weakly correlated with the assessment (coefficient of 0.288, P < 0.001). Our results suggested that non-medical persons would show high accuracy in detecting and measuring respiration and radial pulse, although they did not accurately determine radial pulse strength for the early recognition of CPA., (© 2023. The Author(s).)
- Published
- 2023
- Full Text
- View/download PDF
34. Epithelial cell-derived cytokine TSLP activates regulatory T cells by enhancing fatty acid uptake.
- Author
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Kasuya T, Tanaka S, Tamura J, Etori K, Shoda J, Hattori K, Endo Y, Kitajima M, Kageyama T, Iwamoto T, Yokota M, Iwata A, Suto A, Suzuki K, Suzuki H, Ziegler SF, and Nakajima H
- Subjects
- Thymic Stromal Lymphopoietin, Epithelial Cells, Thymus Gland, Cytokines, T-Lymphocytes, Regulatory
- Abstract
Epithelial cells control a variety of immune cells by secreting cytokines to maintain tissue homeostasis on mucosal surfaces. Regulatory T (Treg) cells are essential for immune homeostasis and for preventing tissue inflammation; however, the precise molecular mechanisms by which epithelial cell-derived cytokines function on Treg cells in the epithelial tissues are not well understood. Here, we show that peripheral Treg cells preferentially respond to thymic stromal lymphoprotein (TSLP). Although TSLP does not affect thymic Treg differentiation, TSLP receptor-deficient induced Treg cells derived from naïve CD4
+ T cells are less activated in an adoptive transfer model of colitis. Mechanistically, TSLP activates induced Treg cells partially through mTORC1 activation and fatty acid uptake. Thus, TSLP modulates the activation status of induced Treg through the enhanced uptake of fatty acids to maintain homeostasis in the large intestine., (© 2023. The Author(s).)- Published
- 2023
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- View/download PDF
35. Effects of a monoclonal antibody against (pro)renin receptor on gliomagenesis.
- Author
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Fujimori T, Shibayama Y, Kanda T, Suzuki K, Ogawa D, Ishikawa R, Kadota K, Matsunaga T, Tamiya T, Nishiyama A, and Miyake K
- Subjects
- Mice, Animals, Humans, Prorenin Receptor, Antibodies, Monoclonal metabolism, Mice, Nude, Cell Line, Tumor, Wnt Signaling Pathway genetics, Cell Proliferation, beta Catenin metabolism, Gene Expression Regulation, Neoplastic, Glioblastoma drug therapy, Glioblastoma genetics, Glioma genetics
- Abstract
Glioblastoma is characterized by a strong self-renewal potential and poor differentiated state. We have reported previously that the (pro)renin receptor [(P)RR] is a potential target for glioma therapy by silencing the (P)RR gene. Here, we have examined the effects of a monoclonal antibody against (P)RR on gliomagenesis. Human glioma cell lines (U251MG and U87MG) and a glioma stem cell line (MGG23) were used for the in vitro study. The expressions of the Wnt/β-catenin signaling pathway (Wnt signaling pathway) components and stemness markers were measured by Western blotting. The effects of the (P)RR antibody on cell proliferation, sphere formation, apoptosis and migration were also examined. Subcutaneous xenografts were also examined in nude mice. Treatment with the (P)RR antibody reduced expression of Wnt signaling pathway components and stemness markers. Furthermore, the (P)RR antibody reduced cell proliferation and decreased sphere formation significantly. The treatment also suppressed migration and induced apoptosis. In a subcutaneous xenograft model, systemic administration of the (P)RR antibody reduced tumor volume significantly. These data show that treatment with the (P)RR antibody is a potential therapeutic strategy for treating glioblastoma., (© 2023. The Author(s).)
- Published
- 2023
- Full Text
- View/download PDF
36. Enhancement of DNA hypomethylation alterations by gastric and bile acids promotes chromosomal instability in Barrett's epithelial cell line.
- Author
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Abe I, Suzuki K, Kimura Y, Tamaki S, Endo Y, Ichida K, Muto Y, Watanabe F, Saito M, Konishi F, and Rikiyama T
- Subjects
- Humans, Cell Line, Chromosomal Instability, Epithelial Cells, Esophagogastric Junction, DNA, Bile Acids and Salts, Barrett Esophagus genetics
- Abstract
Gastric and bile acid reflux leads to chronic inflammation, resulting in methylation alterations in Barrett's esophagus (BE) together with chromosomal instability (CIN). We investigated DNA hypomethylation following acid exposure and confirmed its significance in BE-related carcinogenesis by inducing CIN in vitro. OACP4C, an esophageal cancer cell line, and CP-A, a non-dysplastic cell line originating from BE, were exposed to acidic conditions using deoxycholic acid. CP-A exhibited substantially increased DNA hypomethylation of alpha satellite sequences in the centromere region, as well as increased levels of alpha satellite transcripts, but no changes were observed in the long interspersed nucleotide element-1 sequences distributed throughout the entire genome. These changes were not clearly found in OACP4C. Copy number changes at specific chromosomes were identified in CP-A, along with an increased number of cells exhibiting abnormal segregations, whereas these changes were rarely observed in OACP4C. The changes were maintained after several cell divisions. These findings suggest that alpha satellites are likely targets of DNA hypomethylation induced by acid exposure. CP-A was more sensitive to acid exposure than OACP4C, indicating that acid-induced DNA hypomethylation is involved in cancer development rather than progression, which could be involved in the underlying mechanism of esophagogastric junction carcinoma development., (© 2022. The Author(s).)
- Published
- 2022
- Full Text
- View/download PDF
37. Reproducible and sensitive micro-tissue RNA sequencing from formalin-fixed paraffin-embedded tissues for spatial gene expression analysis.
- Author
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Matsunaga H, Arikawa K, Yamazaki M, Wagatsuma R, Ide K, Samuel AZ, Takamochi K, Suzuki K, Hayashi T, Hosokawa M, Kambara H, and Takeyama H
- Subjects
- Mice, Animals, Paraffin Embedding methods, Tissue Fixation methods, Formaldehyde, Sequence Analysis, RNA methods, Gene Expression Profiling methods, Transcriptome, RNA genetics, RNA analysis, MicroRNAs
- Abstract
Spatial transcriptome analysis of formalin-fixed paraffin-embedded (FFPE) tissues using RNA-sequencing (RNA-seq) provides interactive information on morphology and gene expression, which is useful for clinical applications. However, despite the advantages of long-term storage at room temperature, FFPE tissues may be severely damaged by methylene crosslinking and provide less gene information than fresh-frozen tissues. In this study, we proposed a sensitive FFPE micro-tissue RNA-seq method that combines the punching of tissue sections (diameter: 100 μm) and the direct construction of RNA-seq libraries. We evaluated a method using mouse liver tissues at two years after fixation and embedding and detected approximately 7000 genes in micro-punched tissue-spots (thickness: 10 μm), similar to that detected with purified total RNA (2.5 ng) equivalent to the several dozen cells in the spot. We applied this method to clinical FFPE specimens of lung cancer that had been fixed and embedded 6 years prior, and found that it was possible to determine characteristic gene expression in the microenvironment containing tumor and non-tumor cells of different morphologies. This result indicates that spatial gene expression analysis of the tumor microenvironment is feasible using FFPE tissue sections stored for extensive periods in medical facilities., (© 2022. The Author(s).)
- Published
- 2022
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38. High throughput method of 16S rRNA gene sequencing library preparation for plant root microbial community profiling.
- Author
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Kumaishi K, Usui E, Suzuki K, Kobori S, Sato T, Toda Y, Takanashi H, Shinozaki S, Noda M, Takakura A, Matsumoto K, Yamasaki Y, Tsujimoto H, Iwata H, and Ichihashi Y
- Subjects
- RNA, Ribosomal, 16S genetics, DNA, Bacterial genetics, Genes, rRNA, High-Throughput Nucleotide Sequencing methods, Soil, DNA, Plant Roots, Exonucleases genetics, Microbiota genetics
- Abstract
Microbiota are a major component of agroecosystems. Root microbiota, which inhabit the inside and surface of plant roots, play a significant role in plant growth and health. As next-generation sequencing technology allows the capture of microbial profiles without culturing the microbes, profiling of plant microbiota has become a staple tool in plant science and agriculture. Here, we have increased sample handling efficiency in a two-step PCR amplification protocol for 16S rRNA gene sequencing of plant root microbiota, improving DNA extraction using AMPure XP magnetic beads and PCR purification using exonuclease. These modifications reduce sample handling and capture microbial diversity comparable to that obtained by the manual method. We found a buffer with AMPure XP magnetic beads enabled efficient extraction of microbial DNA directly from plant roots. We also demonstrated that purification using exonuclease before the second PCR step enabled the capture of higher degrees of microbial diversity, thus allowing for the detection of minor bacteria compared with the purification using magnetic beads in this step. In addition, our method generated comparable microbiome profile data in plant roots and soils to that of using common commercially available DNA extraction kits, such as DNeasy PowerSoil Pro Kit and FastDNA SPIN Kit for Soil. Our method offers a simple and high-throughput option for maintaining the quality of plant root microbial community profiling., (© 2022. The Author(s).)
- Published
- 2022
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- View/download PDF
39. Reduction of glutamatergic activity through cholinergic dysfunction in the hippocampus of hippocampal cholinergic neurostimulating peptide precursor protein knockout mice.
- Author
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Suzuki K, Ohi Y, Sato T, Tsuda Y, Madokoro Y, Mizuno M, Adachi K, Uchida Y, Haji A, Ojika K, and Matsukawa N
- Subjects
- Mice, Animals, Mice, Knockout, Acetylcholine metabolism, Hippocampus metabolism, Cholinergic Agents metabolism, Phosphatidylethanolamine Binding Protein genetics, Alzheimer Disease metabolism
- Abstract
Cholinergic activation can enhance glutamatergic activity in the hippocampus under pathologic conditions, such as Alzheimer's disease. The aim of the present study was to elucidate the relationship between glutamatergic neural functional decline and cholinergic neural dysfunction in the hippocampus. We report the importance of hippocampal cholinergic neurostimulating peptide (HCNP) in inducing acetylcholine synthesis in the medial septal nucleus. Here, we demonstrate that HCNP-precursor protein (pp) knockout (KO) mice electrophysiologically presented with glutamatergic dysfunction in the hippocampus with age. The impairment of cholinergic function via a decrease in vesicular acetylcholine transporter in the pre-synapse with reactive upregulation of the muscarinic M1 receptor may be partly involved in glutamatergic dysfunction in the hippocampus of HCNP-pp KO mice. The results, in combination with our previous reports that show the reduction of hippocampal theta power through a decrease of a region-specific choline acetyltransferase in the stratum oriens of CA1 and the decrease of acetylcholine concentration in the hippocampus, may indicate the defined cholinergic dysfunction in HCNP-pp KO mice. This may also support that HCNP-pp KO mice are appropriate genetic models for cholinergic functional impairment in septo-hippocampal interactions. Therefore, according to the cholinergic hypothesis, the model mice might are potential partial pathological animal models for Alzheimer's disease., (© 2022. The Author(s).)
- Published
- 2022
- Full Text
- View/download PDF
40. Clinical frailty assessment might be associated with mortality in incident dialysis patients.
- Author
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Oki R, Hamasaki Y, Tsuji S, Suzuki K, Tsuneishi S, Imafuku M, Komaru Y, Miyamoto Y, Matsuura R, Doi K, and Nangaku M
- Subjects
- Humans, Male, Middle Aged, Aged, Aged, 80 and over, Female, Renal Dialysis, Retrospective Studies, Hospitalization, Geriatric Assessment, Frailty epidemiology
- Abstract
Frailty is associated with mortality in maintenance dialysis patients. For incident dialysis patients, we used the clinical frailty scale (CFS) to investigate frailty as related to mortality or hospitalization within 2 years. We retrospectively reviewed the medical records of patients initiating hemodialysis or peritoneal dialysis during 2016-2018. Based on those records, two dialysis nurses independently used a 9-point CFS (1 = "Very fit" to 9 = "Terminally ill") to assess each patient's frailty at dialysis initiation. Patients with a mean CFS value of 5 or higher were classified into the frail group. The 2-year survival rates or hospitalization-free rates after the initiation of dialysis were compared between the frail (mean CFS score ≥ 5) and non-frail (mean CFS score < 5) groups. The analysis included 155 incident dialysis patients with mean age of 66.7 ± 14.1 (71% male). Frailty was inferred for 39 (25%) patients at dialysis initiation. Kaplan-Meier analyses showed that the survival rate and hospitalization-free rate within 2 years were significantly lower in the frail group than in the non-frail group (p < 0.01). Cox proportional hazards regression analyses revealed the CFS score as associated with the occurrence of a composite outcome, independently of age (hazard ratio 1.34, 95% confidence interval 1.04-1.72). Frailty assessment based on clinical judgment using CFS might predict adverse outcomes in dialysis-initiated patients., (© 2022. The Author(s).)
- Published
- 2022
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- View/download PDF
41. Serum IL-1β predicts de novo hepatitis B virus reactivation during direct-acting antiviral therapy for hepatitis C, not during anti-cancer/immunosuppressive therapy.
- Author
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Kawagishi N, Suda G, Sakamori R, Matsui T, Onozawa M, Yang Z, Yoshida S, Ohara M, Kimura M, Kubo A, Maehara O, Fu Q, Hosoda S, Tokuchi Y, Suzuki K, Nakai M, Sho T, Morikawa K, Natsuizaka M, Ogawa K, Sakai H, Ohnishi S, Baba M, Takehara T, and Sakamoto N
- Subjects
- Antiviral Agents, Cytokines pharmacology, Hepacivirus genetics, Hepatitis B Surface Antigens, Hepatitis B virus genetics, Humans, Immunosuppression Therapy, Interleukins pharmacology, Virus Activation, Antineoplastic Agents therapeutic use, Coinfection, Hepatitis B complications, Hepatitis B drug therapy, Hepatitis B genetics, Hepatitis C complications, Hepatitis C drug therapy, Hepatitis C genetics, Hepatitis C, Chronic drug therapy, Interleukin-1beta blood
- Abstract
De novo hepatitis B virus (HBV) reactivation occurs during direct-acting antiviral (DAA) treatment in hepatitis C virus (HCV)-infected patients with resolved HBV infection. We evaluated the predictive factors, mechanical insight, and differences of cytokine levels during anti-cancer/immunosuppressive and DAA. Eleven, 35, and 19 HCV-infected patients with previous HBV infection with HBV reactivation during DAA treatment, previous HBV infection without HBV reactivation during DAA treatment, and without HBV infection resolution receiving DAA treatment, respectively, were enrolled. Clinical data and baseline cytokine levels were analyzed. Low baseline serum interleukin (IL)-1β levels predicted de novo HBV reactivation during DAA treatment (odds ratio: 47.6, 95% confidence interval: 6.94-333.3). HCV-infected patients with the IL-1β gene single nucleotide polymorphism rs16944 AA allele had significantly higher IL-1β levels; no HCV-infected patient with the IL-1β AA allele experienced HBV reactivation during DAA treatment. Compared to HCV-infected patients with HBV infection resolution, non-HCV infected patients with or without HBV reactivation during anti-cancer/immunosuppressive therapy or bone marrow transplantation had remarkably lower baseline IL-1β levels. Low IL-1β levels were not associated with HBV reactivation. IL-1β levels before DAA for HCV-infected patients with resolved HBV infection could predict HBV reactivation during DAA treatment., (© 2022. The Author(s).)
- Published
- 2022
- Full Text
- View/download PDF
42. Sequential organ failure assessment score as a predictor of the outcomes of patients hospitalized for classical or exertional heatstroke.
- Author
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Yokoyama K, Kaneko T, Ito A, Ieki Y, Kawamoto E, Suzuki K, Ishikura K, Imai H, Kanda J, and Yokobori S
- Subjects
- Adult, Critical Illness, Humans, Intensive Care Units, Prognosis, ROC Curve, Retrospective Studies, Heat Stroke diagnosis, Organ Dysfunction Scores
- Abstract
Heatstroke is a life-threatening event that affects people worldwide. Currently, there are no established tools to predict the outcomes of heatstroke. Although the Sequential Organ Failure Assessment (SOFA) score is a promising tool for judging the severity of critically ill patients. Therefore, in this study, we investigated whether the SOFA score could predict the outcome of patients hospitalized with severe heatstroke, including the classical and exertional types, by using data from a Japanese nationwide multicenter observational registry. We performed retrospective subanalyses of the Japanese Association for Acute Medicine heatstroke registry, 2019. Adults with a SOFA score ≥ 1 hospitalized for heatstroke were analyzed. We analyzed data for 225 patients. Univariate and multivariable analyses showed a significant difference in the SOFA score between non-survivors and survivors in classical and exertional heatstroke cases. The area under the receiver operating characteristic curve were 0.863 (classical) and 0.979 (exertional). The sensitivity and specificity of SOFA scores were 50.0% and 97.5% (classical), 66.7% and 97.5% (exertional), respectively, at a cutoff of 12.5, and 35.0% and 98.8% (classical), 33.3% and 100.0% (exertional), respectively, at a cutoff of 13.5. This study revealed that the SOFA score may predict mortality in patients with heatstroke and might be useful for assessing prognosis., (© 2022. The Author(s).)
- Published
- 2022
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43. Activation of recombinational repair in Ewing sarcoma cells carrying EWS-FLI1 fusion gene by chromosome translocation.
- Author
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Tanaka K, Suzuki K, Miyashita K, Wakasa K, Kawano M, Nakatsu Y, Tsumura H, Yoshida MA, and Oda S
- Subjects
- Cell Line, Tumor, Gene Expression Regulation, Neoplastic, Humans, Oncogene Proteins, Fusion genetics, Oncogene Proteins, Fusion metabolism, Proto-Oncogene Protein c-fli-1 genetics, Proto-Oncogene Protein c-fli-1 metabolism, RNA-Binding Protein EWS genetics, RNA-Binding Protein EWS metabolism, Translocation, Genetic, Neuroectodermal Tumors, Primitive, Peripheral, Sarcoma, Ewing pathology
- Abstract
Chromosome translocation (TL) is an important mode of genomic changes underlying human tumorigenesis, the detailed mechanisms of which are, however, still not well understood. The two major modalities of DNA double strand break repair, i.e. homologous recombination (HR) and non-homologous end-joining (NHEJ), have been hypothesized. In a typical TL
+ human neoplasm, Ewing sarcoma, which is frequently associated with t(11;22) TL encoding the EWS-FLI1 fusion gene, NHEJ has been regarded as a model to explain the disease-specific TL. Using comprehensive microarray approaches, we observed that expression of the HR genes, particularly of RAD51, is upregulated in TL+ Ewing sarcoma cell lines, WE-68 and SK-N-MC, as in the other TL+ tumor cell lines and one defective in DNA mismatch repair (MMR). The upregulated RAD51 expression indeed lead to frequent focus formation, which may suggest an activation of the HR pathway in these cells. Furthermore, sister chromatid exchange was frequently observed in the TL+ and MMR-defective cells. Intriguingly, ionizing irradiation revealed that the decrease of 53BP1 foci was significantly retarded in the Ewing sarcoma cell lines, suggesting that the NHEJ pathway may be less active in the cells. These observations may support an HR involvement, at least in part, to explain TL in Ewing sarcoma., (© 2022. The Author(s).)- Published
- 2022
- Full Text
- View/download PDF
44. Whole-exome analysis of 177 pediatric patients with undiagnosed diseases.
- Author
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Narita K, Muramatsu H, Narumi S, Nakamura Y, Okuno Y, Suzuki K, Hamada M, Yamaguchi N, Suzuki A, Nishio Y, Shiraki A, Yamamori A, Tsumura Y, Sawamura F, Kawaguchi M, Wakamatsu M, Kataoka S, Kato K, Asada H, Kubota T, Muramatsu Y, Kidokoro H, Natsume J, Mizuno S, Nakata T, Inagaki H, Ishihara N, Yonekawa T, Okumura A, Ogi T, Kojima S, Kaname T, Hasegawa T, Saitoh S, and Takahashi Y
- Subjects
- DNA Copy Number Variations, Dual Oxidases, Homozygote, Humans, Rare Diseases, Uniparental Disomy, Exome Sequencing, Exome, Undiagnosed Diseases
- Abstract
Recently, whole-exome sequencing (WES) has been used for genetic diagnoses of patients who remain otherwise undiagnosed. WES was performed in 177 Japanese patients with undiagnosed conditions who were referred to the Tokai regional branch of the Initiative on Rare and Undiagnosed Diseases (IRUD) (TOKAI-IRUD). This study included only patients who had not previously received genome-wide testing. Review meetings with specialists in various medical fields were held to evaluate the genetic diagnosis in each case, which was based on the guidelines of the American College of Medical Genetics and Genomics. WES identified diagnostic single-nucleotide variants in 66 patients and copy number variants (CNVs) in 11 patients. Additionally, a patient was diagnosed with Angelman syndrome with a complex clinical phenotype upon detection of a paternally derived uniparental disomy (UPD) [upd(15)pat] wherein the patient carried a homozygous DUOX2 p.E520D variant in the UPD region. Functional analysis confirmed that this DUOX2 variant was a loss-of-function missense substitution and the primary cause of congenital hypothyroidism. A significantly higher proportion of genetic diagnoses was achieved compared to previous reports (44%, 78/177 vs. 24-35%, respectively), probably due to detailed discussions and the higher rate of CNV detection., (© 2022. The Author(s).)
- Published
- 2022
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45. Local anesthetic lidocaine-inducible gene, growth differentiation factor-15 suppresses the growth of cancer cell lines.
- Author
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Haraguchi-Suzuki K, Kawabata-Iwakawa R, Suzuki T, Suto T, Takazawa T, and Saito S
- Subjects
- Anesthetics, Local pharmacology, Growth Differentiation Factor 9, HeLa Cells, Humans, Lidocaine pharmacology, Transforming Growth Factor beta metabolism, Growth Differentiation Factor 15 genetics, Neoplasms
- Abstract
Administration of local anesthetics, such as lidocaine, in the perioperative period improves outcomes of cancer patients. However, its precise mechanism is still unresolved. The growth of human cancer cell lines, including HeLa cells, are suppressed by lidocaine treatment. We identified that growth differentiation factor-15 (GDF-15) was commonly upregulated in lidocaine-treated cancer cell lines. GDF-15 is a divergent member of the transforming growth factor-β (TGF-β) superfamily and it is produced as an unprocessed pro-protein form and then cleaved to generate a mature form. In lidocaine-treated HeLa cells, increased production of GDF-15 in the endoplasmic reticulum (ER) was observed and unprocessed pro-protein form of GDF-15 was secreted extracellularly. Further, lidocaine induced apoptosis and apoptosis-inducible Tribbles homologue 3 (TRIB3) was also commonly upregulated in lidocaine-treated cancer cell lines. In addition, transcription factor C/EBP homologous protein (CHOP), which is a positive regulator of not only GDF-15 but TRIB3 was also induced by lidocaine. Lidocaine-induced growth suppression and apoptosis was suppressed by knockdown of GDF-15 or TRIB3 expression by small interference RNA (siRNA). These observations suggest that lidocaine suppresses the growth of cancer cells through increasing GDF-15 and TRIB3 expression, suggesting its potential application as cancer therapy., (© 2022. The Author(s).)
- Published
- 2022
- Full Text
- View/download PDF
46. RSPO3 is a novel contraction-inducible factor identified in an "in vitro exercise model" using primary human myotubes.
- Author
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Takahashi T, Li Y, Chen W, Nyasha MR, Ogawa K, Suzuki K, Koide M, Hagiwara Y, Itoi E, Aizawa T, Tsuchiya M, Suzuki N, Aoki M, and Kanzaki M
- Subjects
- Animals, Electric Stimulation, Humans, Interleukin-6 genetics, Mice, Muscle, Skeletal physiology, RNA, Messenger genetics, Muscle Contraction physiology, Muscle Fibers, Skeletal physiology, Thrombospondins genetics
- Abstract
The physiological significance of skeletal muscle as a secretory organ is now well known but we can only speculate as to the existence of as-yet-unidentified myokines, especially those upregulated in response to muscle contractile activity. We first attempted to establish an "insert-chamber based in vitro exercise model" allowing the miniature but high cell-density culture state enabling highly developed contractile human myotubes to be readily obtained by applying electric pulse stimulation (EPS). By employing this in vitro exercise model, we identified R-spondin 3 (RSPO3) as a novel contraction-inducible myokine produced by cultured human myotubes. Contraction-dependent muscular RSPO3 mRNA upregulation was confirmed in skeletal muscles of mice subjected to sciatic nerve mediated in situ contraction as well as those of mice after 2 h of running. Pharmacological in vitro experiments demonstrated a relatively high concentration of metformin (millimolar range) to suppress the contraction-inducible mRNA upregulation of human myokines including RSPO3, interleukin (IL)-6, IL-8 and CXCL1. Our data also suggest human RSPO3 to be a paracrine factor that may positively participate in the myogenesis processes of myoblasts and satellite cells. Thus, the "insert chamber-based in vitro exercise model" is a potentially valuable research tool for investigating contraction-inducible biological responses of human myotubes usually exhibiting poorer contractility development even in the setting of EPS treatment., (© 2022. The Author(s).)
- Published
- 2022
- Full Text
- View/download PDF
47. Risk factors for unfavourable outcomes after shunt surgery in patients with idiopathic normal-pressure hydrocephalus.
- Author
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Kobayashi E, Kanno S, Kawakami N, Narita W, Saito M, Endo K, Iwasaki M, Kawaguchi T, Yamada S, Ishii K, Kazui H, Miyajima M, Ishikawa M, Mori E, Tominaga T, Tanaka F, and Suzuki K
- Subjects
- Humans, Prospective Studies, Risk Factors, Treatment Outcome, Hydrocephalus, Normal Pressure diagnosis, Hypertension epidemiology
- Abstract
A number of vascular risk factors (VRFs) have been reported to be associated with idiopathic normal-pressure hydrocephalus (iNPH), but it remains unclear whether these VRFs are related to patient outcomes after shunt surgery. Therefore, we investigated the risk factors for unfavourable outcomes after shunt surgery in iNPH patients using two samples from Tohoku University Hospital and from a multicentre prospective trial of lumboperitoneal (LP) shunt surgery for patients with iNPH (SINPHONI-2). We enrolled 158 iNPH patients. We compared the prevalence of VRFs and clinical measures between patients with favourable and unfavourable outcomes and identified predictors of unfavourable outcomes using multivariate logistic regression analyses. The presence of hypertension, longer disease duration, more severe urinary dysfunction, and a lower Evans' index were predictors of unfavourable outcomes after shunt surgery. In addition, hypertension and longer disease duration were also predictors in patients with independent walking, and a lower Evans' index was the only predictor in patients who needed assistance to walk or could not walk. Our findings indicate that hypertension is the only VRF related to unfavourable outcomes after shunt surgery in iNPH patients. Larger-scale studies are needed to elucidate the reason why hypertension can affect the irreversibility of symptoms after shunt placement., (© 2022. The Author(s).)
- Published
- 2022
- Full Text
- View/download PDF
48. IκBζ regulates the development of nonalcoholic fatty liver disease through the attenuation of hepatic steatosis in mice.
- Author
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Ishikawa H, Hayakawa M, Baatartsogt N, Kakizawa N, Ohto-Ozaki H, Maruyama T, Miura K, Suzuki K, Rikiyama T, and Ohmori T
- Subjects
- Adaptor Proteins, Signal Transducing metabolism, Animals, Diet, High-Fat, Lipid Metabolism, Liver metabolism, Mice, Mice, Inbred C57BL, Triglycerides metabolism, Non-alcoholic Fatty Liver Disease genetics, Non-alcoholic Fatty Liver Disease metabolism
- Abstract
IκBζ is a transcriptional regulator that augments inflammatory responses from the Toll-like receptor or interleukin signaling. These innate immune responses contribute to the progression of nonalcoholic fatty liver disease (NAFLD); however, the role of IκBζ in the pathogenesis of NAFLD remains elusive. We investigated whether IκBζ was involved in the progression of NAFLD in mice. We generated hepatocyte-specific IκBζ-deficient mice (Alb-Cre; Nfkbiz
fl/fl ) by crossing Nfkbizfl/fl mice with Alb-Cre transgenic mice. NAFLD was induced by feeding the mice a choline-deficient, L-amino acid-defined, high-fat diet (CDAHFD). CDAHFD-induced IκBζ expression in the liver was observed in Nfkbizfl/fl mice, but not in Alb-Cre; Nfkbizfl/fl mice. Contrary to our initial expectation, IκBζ deletion in hepatocytes accelerated the progression of NAFLD after CDAHFD treatment. Although the increased expression of inflammatory cytokines and apoptosis-related proteins by CDAHFD remained unchanged between Nfkbizfl/fl and Alb-Cre; Nfkbizfl/fl mice, early-stage steatosis of the liver was significantly augmented in Alb-Cre; Nfkbizfl/fl mice. Overexpression of IκBζ in hepatocytes via the adeno-associated virus vector attenuated liver steatosis caused by the CDAHFD in wild-type C57BL/6 mice. This preventive effect of IκBζ overexpression on steatosis was not observed without transcriptional activity. Microarray analysis revealed a correlation between IκBζ expression and the changes of factors related to triglyceride biosynthesis and lipoprotein uptake. Our data suggest that hepatic IκBζ attenuates the progression of NAFLD possibly through the regulation of the factors related to triglyceride metabolism., (© 2022. The Author(s).)- Published
- 2022
- Full Text
- View/download PDF
49. Overexpression of satellite RNAs in heterochromatin induces chromosomal instability and reflects drug sensitivity in mouse cancer cells.
- Author
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Tamaki S, Suzuki K, Abe I, Endo Y, Kakizawa N, Watanabe F, Saito M, Tsujinaka S, Miyakura Y, Ohta S, Tago K, Yanagisawa K, Konishi F, and Rikiyama T
- Subjects
- Animals, Camptothecin pharmacology, Chromosomal Instability, DNA Damage, Mice, RNA, Satellite, Heterochromatin genetics, Neoplasms
- Abstract
Overexpression of satellite RNAs in heterochromatin induces chromosomal instability (CIN) through the DNA damage response and cell cycle checkpoint activation. Although satellite RNAs may be therapeutic targets, the associated mechanisms underlying drug sensitivity are unknown. Here, we determined whether satellite RNAs reflect drug sensitivity to the topoisomerase I inhibitor camptothecin (CPT) via CIN induction. We constructed retroviral vectors expressing major satellite and control viruses, infected microsatellite stable mouse colon cancer cells (CT26) and MC38 cells harboring microsatellite instability, and assessed drug sensitivity after 48 h. Cells overexpressing satellite RNAs showed clear features of abnormal segregation, including micronuclei and anaphase bridging, and elevated levels of the DNA damage marker γH2AX relative to controls. Additionally, overexpression of satellite RNAs enhanced MC38 cell susceptibility to CPT [half-maximal inhibitory concentration: 0.814 μM (control) vs. 0.332 μM (MC38 cells with a major satellite), p = 0.003] but not that of CT26. These findings imply that MC38 cells, which are unlikely to harbor CIN, are more susceptible to CIN-induced CPT sensitivity than CT26 cells, which are characterized by CIN. Furthermore, CPT administration upregulated p53 levels but not those of p21, indicating that overexpression of major satellite transcripts likely induces CPT-responsive cell death rather than cellular senescence., (© 2022. The Author(s).)
- Published
- 2022
- Full Text
- View/download PDF
50. Cell-repellent polyampholyte for conformal coating on microstructures.
- Author
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Suzuki K, Hiroi Y, Abe-Fukasawa N, Nishino T, Shouji T, Katayama J, Kageyama T, and Fukuda J
- Subjects
- Animals, Cell Adhesion, Hydrophobic and Hydrophilic Interactions, Mice, Mice, Nude, Microscopy, Electron, Scanning, Coated Materials, Biocompatible chemistry
- Abstract
Repellent coatings are critical for the development of biomedical and analytical devices to prevent nonspecific protein and cell adhesion. In this study, prevelex (polyampholytes containing phosphate and amine units) was synthesized for the fine coating of microdevices for cell culture. The dip-coating of the prevelex on hydrophobic substrates altered their surfaces to be highly hydrophilic and electrically neutral. The range of prebake temperature (50-150 °C) after dip-coating was moderate and within a preferable range to treat typical materials for cell culture such as polystyrene and polydimethylsiloxane. Scanning electron microscopy revealed a conformal and ultra-thin film coating on the micro/nano structures. When compared with poly(2-hydroxyethyl methacrylate) and poly(2-methacryloyloxyethyl phosphorylcholine), prevelex exhibited better characteristics for coating on microwell array devices, thereby facilitating the formation of spheroids with uniform diameters using various cell types. Furthermore, to examine cellular functionalities, mouse embryonic epithelial and mesenchymal cells were seeded in a prevelex-coated microwell array device. The two types of cells formed hair follicle germ-like aggregates in the device. The aggregates were then transplanted to generate de novo hair follicles in nude mice. The coating material provided a robust and fine coating approach for the preparation of non-fouling surfaces for tissue engineering and biomedical applications., (© 2022. The Author(s).)
- Published
- 2022
- Full Text
- View/download PDF
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