28 results on '"Qian B"'
Search Results
2. Evidence of s-wave superconductivity in the noncentrosymmetric La7Ir3
- Author
-
Li, B., primary, Xu, C. Q., additional, Zhou, W., additional, Jiao, W. H., additional, Sankar, R., additional, Zhang, F. M., additional, Hou, H. H., additional, Jiang, X. F., additional, Qian, B., additional, Chen, B., additional, Bangura, A. F., additional, and Xu, Xiaofeng, additional
- Published
- 2018
- Full Text
- View/download PDF
3. Effects of exenatide on urinary albumin in overweight/obese patients with T2DM: a randomized clinical trial
- Author
-
Chao Kang, Qiao Qiao, Qiang Tong, Qian Bai, Chen Huang, Rong Fan, Hui Wang, Kanakaraju Kaliannan, Jian Wang, and Jing Xu
- Subjects
Medicine ,Science - Abstract
Abstract In this study, we investigated the effect of exenatide (EXE), a glucagon-like peptide (GLP)-1 receptor agonist, on kidney function, obesity indices, and glucose control in overweight/obese patients with type 2 diabetes mellitus (T2DM). A total of 159 overweight/obese patients with T2DM were randomized to the EXE group or insulin glargine (GLAR) control group for a total treatment period of 24 weeks. EXE intervention significantly reduced the urine albumin concentration (UAC) at week 12 and 24 endpoints (P
- Published
- 2021
- Full Text
- View/download PDF
4. Intermartensitic Transformation and Enhanced Exchange Bias in Pd (Pt) -doped Ni-Mn-Sn alloys
- Author
-
Dong, S. Y., primary, Chen, J. Y., additional, Han, Z. D., additional, Fang, Y., additional, Zhang, L., additional, Zhang, C. L., additional, Qian, B., additional, and Jiang, X. F., additional
- Published
- 2016
- Full Text
- View/download PDF
5. Combined transcriptomic and lipidomic analysis reveals aberrant lipid metabolism in central nervous system hemangioblastomas
- Author
-
Qiguang Wang, Wenke Liu, Si Zhang, Zuoyu Liang, Linhong Jiang, Aiqin Xue, Xiaobo Cen, and Qian Bu
- Subjects
Medicine ,Science - Abstract
Abstract Peritumoral cysts are commonly detected in the central nervous system tumors, especially hemangioblastomas (HBs). However, the molecular mechanisms driving their formation and propagation are still unknown. We conducted an integrated lipidomics and transcriptomics analysis on solid and cystic HB samples in order to elucidate the changes in the lipid profile and expression of lipid metabolism-related genes during cyst formation. Transcriptomic analysis revealed differential expression of several genes between the solid and cystic HBs, and those associated with lipid metabolism, such as ADCY4, MGLL, ACOT2, DGKG, SHC1 and LPAR2, were markedly dysregulated in the cystic HBs. The lipidomic analysis further showed a significant reduction in the abundance of triacylglycerol, ceramide, lysophosphatidylcholine and lysophosphatidylethanolamine, and an increase in phosphatidylcholine and phosphatidylethanolamine levels in the cystic HBs. Furthermore, bioinformatics analysis revealed altered lipid biosynthesis, glycerophospholipid metabolism and phospholipase activity in the cystic HBs. Taken together, our findings indicate that cyst formation in HBs is related with aberrant lipid metabolism.
- Published
- 2021
- Full Text
- View/download PDF
6. Association between tobacco smoke exposure and serum parathyroid hormone levels among US adults (NHANES 2003-2006).
- Author
-
Hu L, Qian B, Bing K, Mei L, Ruan S, and Qu X
- Subjects
- Humans, Male, Adult, Female, Middle Aged, United States epidemiology, Aged, Young Adult, Parathyroid Hormone blood, Cotinine blood, Nutrition Surveys, Tobacco Smoke Pollution adverse effects
- Abstract
Tobacco smoke exposure has been demonstrated to impede bone remodeling and diminish bone density, yet research regarding its correlation with parathyroid hormone (PTH) remains limited. This study aims to investigate the relationship between tobacco smoke exposure and serum PTH levels in adults aged 20 years and older. This study included 7,641 participants from two cycles of the National Health and Nutrition Examination Survey (NHANES, United States, 2003- 2006). Reflect tobacco smoke exposure through serum cotinine levels, and use an adjusted weighted multivariate linear regression model to test the independent linear relationship between serum cotinine and PTH. Stratified analysis was conducted to validate the sensitivity of the conclusions. Smooth curve fitting and threshold effect analysis were performed to assess the non-linear relationship. After comprehensive adjustment using weighted multivariate regression analysis, a negative correlation was found between serum cotinine and PTH levels. The interaction p-values in subgroup analyses were all greater than 0.05. Moreover, smooth curve fitting indicated a non-linear relationship between serum cotinine and PTH, with a turning point observed. Our research indicates that tobacco smoke exposure is negatively correlated and independent of serum parathyroid hormone levels, indicating that long-term tobacco smoke exposure may lead to parathyroid dysfunction in adults., (© 2024. The Author(s).)
- Published
- 2024
- Full Text
- View/download PDF
7. Identification of subgroups and development of prognostic risk models along the glycolysis-cholesterol synthesis axis in lung adenocarcinoma.
- Author
-
Jiang J, Qian B, Guo Y, and He Z
- Subjects
- Humans, Prognosis, Female, Male, Gene Expression Regulation, Neoplastic, Machine Learning, Middle Aged, Biomarkers, Tumor genetics, Biomarkers, Tumor metabolism, Glycolysis genetics, Adenocarcinoma of Lung genetics, Adenocarcinoma of Lung mortality, Adenocarcinoma of Lung pathology, Adenocarcinoma of Lung metabolism, Lung Neoplasms genetics, Lung Neoplasms metabolism, Lung Neoplasms pathology, Lung Neoplasms mortality, Cholesterol metabolism, Cholesterol biosynthesis
- Abstract
Lung cancer is one of the most dangerous malignant tumors affecting human health. Lung adenocarcinoma (LUAD) is the most common subtype of lung cancer. Both glycolytic and cholesterogenic pathways play critical roles in metabolic adaptation to cancer. A dataset of 585 LUAD samples was downloaded from The Cancer Genome Atlas database. We obtained co-expressed glycolysis and cholesterogenesis genes by selecting and clustering genes from Molecular Signatures Database v7.5. We compared the prognosis of different subtypes and identified differentially expressed genes between subtypes. Predictive outcome events were modeled using machine learning, and the top 9 most important prognostic genes were selected by Shapley additive explanation analysis. A risk score model was built based on multivariate Cox analysis. LUAD patients were categorized into four metabolic subgroups: cholesterogenic, glycolytic, quiescent, and mixed. The worst prognosis was the mixed subtype. The prognostic model had great predictive performance in the test set. Patients with LUAD were effectively typed by glycolytic and cholesterogenic genes and were identified as having the worst prognosis in the glycolytic and cholesterogenic enriched gene groups. The prognostic model can provide an essential basis for clinicians to predict clinical outcomes for patients. The model was robust on the training and test datasets and had a great predictive performance., (© 2024. The Author(s).)
- Published
- 2024
- Full Text
- View/download PDF
8. Nonlinear mechanical response analysis and convolutional neural network enabled diagnosis of single-span rotor bearing system.
- Author
-
Qian B, Cai Y, Ran Y, and Sun W
- Abstract
The wide application of rotating machinery has boosted the development of electricity and aviation, however, long-term operation can lead to a variety of faults. The use of different measures to deal with corresponding malfunctions is the key to generating benefits, so it is significant to carry out the fault diagnosis of rotating machinery. In this work, a test bench for single-span rotor bearings was established, three faults, including spindle bending, spindle crack without end loading and spindle crack with end loading, are experimental analyzed with basic mechanical response. Moreover, a diagnosis is performed using a convolutional neural network, according to the differences in mechanical responses of the three faults obtained from experiments. For three faults, the change in the properties of spindle itself results in different axis trajectories and spectra. Compared with spindle bending fault, spindle crack fault not only cause 1×, 2×, 3× frequency component excitation, also 4×, 5× frequency component excitation. Additionally, the classification accuracy of the training set and the test set under machine learning for the three types of working conditions is 100%. This indicates that the network can significantly identify signal features so as to make effective fault classification., (© 2024. The Author(s).)
- Published
- 2024
- Full Text
- View/download PDF
9. A pan-cancer analysis of anti-proliferative protein family genes for therapeutic targets in cancer.
- Author
-
Zhang S, Gu J, Shi LL, Qian B, Diao X, Jiang X, Wu J, Wu Z, and Shen A
- Subjects
- Humans, Oncogenes, Immunotherapy, Cognition, Computational Biology, Tumor Microenvironment genetics, Tumor Suppressor Proteins genetics, Neoplasms drug therapy, Neoplasms genetics, Immediate-Early Proteins
- Abstract
The recently discovered APRO (anti-proliferative protein) family encodes a group of trans-membrane glycoproteins and includes 6 members: TOB1, TOB2, BTG1, BTG2, BTG3 and BTG4. The APRO family is reportedly associated with the initiation and progression of cancers. This study aims to undertake a comprehensive investigation of the APRO family of proteins as a prognostic biomarker in various human tumors. We performed a pan-cancer analysis of the APRO family based on The Cancer Genome Atlas (TCGA). With the bioinformatics methods, we explored the prognostic value of the APRO family and the correlation between APRO family expression and tumor mutation burden (TMB), microsatellite instability (MSI), drug sensitivity, and immunotherapy in numerous cancers. Our results show that the APRO family was primarily down-regulated in cancer samples. The expression of APRO family members was linked with patient prognosis. In addition, APRO family genes showed significant association with immune infiltrate subtypes, tumor microenvironment, and tumor cell stemness. Finally, our study also demonstrated the relationship between APRO family genes and drug sensitivity. This study provides comprehensive information to understand the APRO family's role as an oncogene and predictor of survival in some tumor types., (© 2023. The Author(s).)
- Published
- 2023
- Full Text
- View/download PDF
10. Prognostic analysis of cutaneous Kaposi sarcoma based on a competing risk model.
- Author
-
Qian B, Qian Y, Xiao P, and Guo L
- Subjects
- Humans, Prognosis, Nomograms, Area Under Curve, SEER Program, Sarcoma, Kaposi epidemiology, Skin Neoplasms epidemiology
- Abstract
The data regarding the prognosis of cutaneous Kaposi sarcoma (KS) was limited. The current study aimed to explore the risk factors and develop a predictive model for the prognosis of cutaneous KS patients. Data were extracted from Surveillance, Epidemiology, and End Results database from 2000 to 2018 and randomly divided into training and validation cohort. The Kaplan-Meier analysis, cumulative incidence function based on the competing risk model and Fine-Gray multivariable regression model was used to identify the prognostic factors and then construct a 5-, 10-, and 15-year KS-specific death (KSSD) nomogram for patients. The concordance index (C-index), area under the curve (AUC) of operating characteristics and calibration plots were used to evaluate the performance of the model. The clinical utility of the model was measured by decision curve analysis (DCA). In 2257 cutaneous KS patients identified from database, the overall median survival time was about 13 years. Radiotherapy (p = 0.013) and surgery (p < 0.001) could lower the KSSD, while chemotherapy (p = 0.042) and surgery (p < 0.001) could increase the overall survival (OS) of patients with metastatic and localized lesions, respectively. Race, number of lesions, surgery, extent of disease, year of diagnosis and age were identified as risk factors associated with cutaneous KS-specific survival. Performance of the nomogram was validated by calibration and discrimination, with C-index values of 0.709 and AUC for 5-, 10-, and 15-year-KSSD of 0.739, 0.728 and 0.725 respectively. DCA indicated that the nomogram had good net benefits in clinical scenarios. Using a competing-risk model, this study firstly identified the prognostic factors, and constructed a validated nomogram to provide individualized assessment and reliable prognostic prediction for cutaneous KS patients., (© 2023. Springer Nature Limited.)
- Published
- 2023
- Full Text
- View/download PDF
11. Identification of MIR600HG/hsa-miR-342-3p/ANLN network as a potential prognosis biomarker associated with lmmune infiltrates in pancreatic cancer.
- Author
-
Qian B, Liu Q, Wang C, Lu S, Ke S, Yin B, Li X, Yu H, Wu Y, and Ma Y
- Subjects
- Humans, Biomarkers, Pancreatic Neoplasms, MicroRNAs genetics, Pancreatic Neoplasms genetics
- Abstract
Pancreatic cancer is one of the tumors with the worst prognosis, causing serious harm to human health. The RNA network and immune response play an important role in tumor progression. While a systematic RNA network linked to the tumor immune response remains to be further explored in pancreatic cancer. Based on The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) databases, the MIR600HG/hsa-miR-342-3p/ANLN network was determined. WB and IHC were used to confirm the high expression of ANLN in pancreatic cancer. The prognostic model based on the RNA network could effectively predict the survival prognosis of patients. The analysis of immune infiltration showed that the MIR600HG/hsa-miR-342-3p/ANLN network altered the level of infiltration of T helper 2 (Th2) and effector memory T (Tem) cells. Furthermore, we found that the chemokines chemokine ligand (CCL) 5 and CCL14 may play a key role in immune cell infiltration mediated by the RNA network. In conclusion, this study constructed a prognostic model based on the MIR600HG/hsa-miR-342-3p/ANLN network and found that it may function in tumor immunity., (© 2023. Springer Nature Limited.)
- Published
- 2023
- Full Text
- View/download PDF
12. Liquid tumor microenvironment enhances WNT signaling pathway of peritoneal metastasis of gastric cancer.
- Author
-
Xu H, Hao Z, Wang Y, Zhang D, Li J, Chen L, Yao N, Qian B, Peng X, and Zhan X
- Subjects
- Humans, Wnt Signaling Pathway, Tumor Microenvironment, Peritoneum, Stomach Neoplasms, Peritoneal Neoplasms
- Abstract
Gastric cancer remains one of the most prevalent tumors worldwide and peritoneal metastasis is responsible for approximately 60% of death in advanced gastric cancer patients. However, the underlying mechanism of peritoneal metastasis is poorly understood. We have established organoids derived from malignant ascites (MA) of gastric cancer patients and noticed that MA supernatant could strongly increase the colony formation of organoids. Thus, we realized the interaction between exfoliated cancer cells (ECCs) and liquid tumor microenvironment contributes to peritoneal metastasis. Further, we designed a medium component control test which proved that exosomes derived from MA could not enhance the growth of organoids. Using Immunofluorescence and confocal imaging as well as dual-luciferase reporter assay, our data showed WNT signaling pathway was upregulated by high concentrations of WNT ligands (wnt3a and wnt5a), which was verified by ELISA. Besides, suppressing WNT signaling pathway diminished the growth promoting function of MA supernatant. This result implicated WNT signaling pathway as a potential therapeutic target for peritoneal metastasis of gastric cancer., (© 2023. The Author(s).)
- Published
- 2023
- Full Text
- View/download PDF
13. Sex differences in hepatic ischemia‒reperfusion injury: a cross-sectional study.
- Author
-
Li Z, Lu S, Qian B, Meng Z, Zhou Y, Chen D, Chen B, Yang G, and Ma Y
- Subjects
- Humans, Male, Female, Cross-Sectional Studies, Liver, Estrogens, Gonadal Hormones, Sex Characteristics, Reperfusion Injury
- Abstract
Several studies have shown that males suffer more severe damage than females in the process of ischemia and reperfusion of the brain, heart and kidney. Accordingly, our study will reveal the correlation between the severity of hepatic ischemia‒reperfusion injury (HIRI) and sex, and preliminarily analyze the underlying mechanism. A total of 75 patients who were considered to have "benign liver tumors" at the initial admission and underwent partial hepatectomy were enrolled. We identified potential differences between different groups and discussed the correlation between the severity of HIRI and sex through a comparative analysis. Results showed that HIRI was more severe in males than in females, especially in younger patients. To explore whether estrogen level differences are the main reason for the sex differences in HIRI, we further revealed that HIRI in premenopausal females was more severe than that in postmenopausal females. By comparing the levels of gonadal hormones, we speculated that multiple gonadal hormones, including follicle-stimulating hormone, luteinizing hormone and testosterone, may jointly participate in the regulation of sex differences in HIRI together with estrogen., (© 2023. The Author(s).)
- Published
- 2023
- Full Text
- View/download PDF
14. Efficacy of salmeterol and magnesium isoglycyrrhizinate combination treatment in rats with chronic obstructive pulmonary disease.
- Author
-
Yang Y, Huang L, Tian C, and Qian B
- Subjects
- Administration, Inhalation, Albuterol therapeutic use, Androstadienes pharmacology, Animals, Anti-Inflammatory Agents therapeutic use, Drug Combinations, Fluticasone pharmacology, Fluticasone therapeutic use, Rats, Salmeterol Xinafoate pharmacology, Salmeterol Xinafoate therapeutic use, Saponins, Triterpenes, Bronchodilator Agents adverse effects, Pulmonary Disease, Chronic Obstructive
- Abstract
The most classic treatment recommended in the current chronic obstructive pulmonary disease (COPD) guidelines is glucocorticoid and β2 receptor agonist combination, such as salmeterol xinafoate and fluticasone propionate (Sal/Flu), causing many adverse reactions due to hormones. Magnesium isoglycyrrhizinate (MgIG) is an anti-inflammatory glycyrrhizic acid preparation for treating chronic inflammation, contributing to its structure is similar to steroidal anti-inflammatory drugs. In this study, we successfully established COPD rat model by endotracheal-atomized lipopolysaccharide exposure and cigarette smoke induction, as characterized by lung function decline. We discovered that salmeterol xinafoate/MgIG combination could alleviated lung inflammation infiltration, airway wall thickness (AWT) and the secretion of bronchial mucin MUC5AC of COPD rats more than salmeterol xinafoate, MgIG, or salmeterol xinafoate and fluticasone propionate treatment did, as well as reduced inflammatory cells (white blood cells, neutrophils and lymphocytes) accumulation in bronchoalveolar lavage fluid and decreased TNF-α, IL-6 and IL-1β production in the serum of COPD rats. Finally, we found that Moreover, the mechanism involved might be related to the suppression of JAK/STAT signaling pathway. Overall, our studies suggested that MgIG might be a potential alternative adjuvant drug for fluticasone propionate for the clinical treatment of patients with COPD., (© 2022. The Author(s).)
- Published
- 2022
- Full Text
- View/download PDF
15. Effectiveness of using representative subsets of global climate models in future crop yield projections.
- Author
-
Qian B, Jing Q, Cannon AJ, Smith W, Grant B, Semenov MA, Xu YP, and Ma D
- Abstract
Representative subsets of global climate models (GCMs) are often used in climate change impact studies to account for uncertainty in ensemble climate projections. However, the effectiveness of such subsets has seldom been assessed for the estimations of either the mean or the spread of the full ensembles. We assessed two different approaches that were employed to select 5 GCMs from a 20-member ensemble of GCMs from the CMIP5 ensemble for projecting canola and spring wheat yields across Canada under RCP 4.5 and 8.5 emission scenarios in the periods 2040-2069 and 2070-2099, based on crop simulation models. Averages and spreads of the simulated crop yields using the 5-GCM subsets selected by T&P and KKZ approaches were compared with the full 20-GCM ensemble. Our results showed that the 5-GCM subsets selected by the two approaches could produce full-ensemble means with a relative absolute error of 2.9-4.7% for canola and 1.5-2.2% for spring wheat, and covers 61.8-91.1% and 66.1-80.8% of the full-ensemble spread for canola and spring wheat, respectively. Our results also demonstrated that both approaches were very likely to outperform a subset of randomly selected 5 GCMs in terms of a smaller error and a larger range., (© 2021. The Author(s).)
- Published
- 2021
- Full Text
- View/download PDF
16. Study on laser powder bed fusion of nickel-base alloy of G-surface structure: scanning strategy, properties and compression properties.
- Author
-
Qian B, Fan H, Zhang J, Li T, Xi J, and Qiu Z
- Abstract
Aiming at laser powder bed fusion of GH3536 nickel base alloy, the effects of different scanning strategies on microstructure, porosity and mechanical properties were explored. In the aspect of microstructure and micro hardness of the sample, three scanning strategies had little difference; in the aspect of macro mechanical properties of the sample, the slope subarea scanning was better than the helix and island scanning. On this basis, the slope subarea scanning was selected as the optimal scanning strategy to form the G-surface structure, and the compression performance of G-surface was studied. The results showed that: (1) the compression performance of G-surface structure was smaller than that of solid structure, The compression strength of G-surface can only reach about 20% of solid structure: the average strength value of G-surface is 220 MPa, solid structure is 1.1 GMpa; while G-surface structure had a smooth compression curve, which indicated the good energy absorption characteristics; (2) with the increase of wall thickness, the mechanical performance of G-surface structure was also enhanced, while the energy absorption capacity was constantly reduced; (3) with the same wall thickness, the compression performance of sample in building direction (BD) is higher than that in horizontal direction (HD).
- Published
- 2021
- Full Text
- View/download PDF
17. Predictive model for the 5-year survival status of osteosarcoma patients based on the SEER database and XGBoost algorithm.
- Author
-
Jiang J, Pan H, Li M, Qian B, Lin X, and Fan S
- Subjects
- Disease-Free Survival, Female, Humans, Male, Predictive Value of Tests, SEER Program, Survival Rate, Bone Neoplasms mortality, Databases, Factual, Machine Learning, Models, Biological, Osteosarcoma mortality
- Abstract
Osteosarcoma is the most common bone malignancy, with the highest incidence in children and adolescents. Survival rate prediction is important for improving prognosis and planning therapy. However, there is still no prediction model with a high accuracy rate for osteosarcoma. Therefore, we aimed to construct an artificial intelligence (AI) model for predicting the 5-year survival of osteosarcoma patients by using extreme gradient boosting (XGBoost), a large-scale machine-learning algorithm. We identified cases of osteosarcoma in the Surveillance, Epidemiology, and End Results (SEER) Research Database and excluded substandard samples. The study population was 835 and was divided into the training set (n = 668) and validation set (n = 167). Characteristics selected via survival analyses were used to construct the model. Receiver operating characteristic (ROC) curve and decision curve analyses were performed to evaluate the prediction. The accuracy of the prediction model was excellent both in the training set (area under the ROC curve [AUC] = 0.977) and the validation set (AUC = 0.911). Decision curve analyses proved the model could be used to support clinical decisions. XGBoost is an effective algorithm for predicting 5-year survival of osteosarcoma patients. Our prediction model had excellent accuracy and is therefore useful in clinical settings.
- Published
- 2021
- Full Text
- View/download PDF
18. Three-dimensional reconstruction of laryngeal cancer with whole organ serial immunohistochemical sections.
- Author
-
Tian J, Qian B, Zhang S, Guo R, Zhang H, Jeannon JP, Jin R, Feng X, Zhan Y, Liu J, He P, Guo J, Li L, Jia Y, Huang F, and Wang B
- Subjects
- Aged, Humans, Immunohistochemistry, Male, Image Processing, Computer-Assisted methods, Imaging, Three-Dimensional methods, Laryngeal Neoplasms diagnostic imaging
- Abstract
Three-dimensional (3D) image reconstruction of tumors based on serial histological sectioning is one of the most powerful methods for accurate high-resolution visualization of tumor structures. However, 3D histological reconstruction of whole tumor has not yet been achieved. We established a high-resolution 3D model of molecular marked whole laryngeal cancer by optimizing the currently available techniques. A series of 5,388 HE stained or immunohistochemically stained whole light microscopic images (200 ×) were acquired (15.61 TB).The data set of block-face images (96.2 GB) was also captured. Direct volume rendering of serial 6.25 × light microscopy images did not demonstrate the major characteristics of the laryngeal cancer as expected. Based on fusion of two datasets, the accurate boundary of laryngeal tumor bulk was visualized in an anatomically realistic context. In the regions of interest, micro tumor structure, budding, cell proliferation and tumor lymph vessels were well represented in 3D after segmentation, which highlighted the advantages of 3D reconstruction of light microscopy images. In conclusion, generating 3D digital histopathological images of a whole solid tumor based on current technology is feasible. However, data mining strategy should be developed for complete utilization of the large amount of data generated.
- Published
- 2020
- Full Text
- View/download PDF
19. A Genome-Wide Analysis of the Penumbral Volume in Inbred Mice following Middle Cerebral Artery Occlusion.
- Author
-
Rudy RF, Charoenvimolphan N, Qian B, Berndt A, Friedlander RM, Weiss ST, and Du R
- Subjects
- Alleles, Animals, Biomarkers, Biopsy, Brain Ischemia etiology, Brain Ischemia metabolism, Brain Ischemia pathology, Disease Models, Animal, Infarction, Middle Cerebral Artery, Mice, Polymorphism, Single Nucleotide, Stroke metabolism, Disease Susceptibility, Genetic Association Studies, Genome-Wide Association Study, Stroke etiology, Stroke pathology
- Abstract
Following ischemic stroke, the penumbra, at-risk neural tissue surrounding the core infarct, survives for a variable period of time before progressing to infarction. We investigated genetic determinants of the size of penumbra in mice subjected to middle cerebral artery occlusion (MCAO) using a genome-wide approach. 449 male mice from 33 inbred strains underwent MCAO for 6 hours (215 mice) or 24 hours (234 mice). A genome-wide association study using genetic data from the Mouse HapMap project was performed to examine the effects of genetic variants on the penumbra ratio, defined as the ratio of the infarct volume after 6 hours to the infarct volume after 24 hours of MCAO. Efficient mixed model analysis was used to account for strain interrelatedness. Penumbra ratio differed significantly by strain (F = 2.7, P < 0.001) and was associated with 18 significant SNPs, including 6 protein coding genes. We have identified 6 candidate genes for penumbra ratio: Clint1, Nbea, Smtnl2, Rin3, Dclk1, and Slc24a4.
- Published
- 2019
- Full Text
- View/download PDF
20. Two-band and pauli-limiting effects on the upper critical field of 112-type iron pnictide superconductors.
- Author
-
Xing X, Zhou W, Wang J, Zhu Z, Zhang Y, Zhou N, Qian B, Xu X, and Shi Z
- Abstract
The temperature dependence of upper critical field μ
0 Hc2 of Ca0.83 La0.17 FeAs2 and Ca0.8 La0.2 Fe0.98 Co0.02 As2 single crystals are investigated by measuring the resistivity for the inter-plane (H//c) and in-plane (H//ab) directions in magnetic fields up to 60 T. It is found that μ0 Hc2 (T) of both crystals for H//c presents a sublinear temperature dependence with decreasing temperature, whereas the curve of μ0 Hc2 (T) for H//ab has a convex curvature and gradually tends to saturate at low temperatures. μ0 Hc2 (T) in both crystals deviates from the conventional Werthamer-Helfand-Hohenberg (WHH) theoretical model without considering spin paramagnetic effect for H//c and H//ab directions. Detailed analyses show that the behavior of μ0 Hc2 (T) in 112-type Iron-based superconductors (IBSs) is similar to that of most IBSs. Two-band model is required to fully reproduce the behavior of μ0 Hc2 (T) for H//c, while the effect of spin paramagnetic effect is responsible for the behavior of μ0 Hc2 (T) for H//ab.- Published
- 2017
- Full Text
- View/download PDF
21. KCC2 downregulation facilitates epileptic seizures.
- Author
-
Chen L, Wan L, Wu Z, Ren W, Huang Y, Qian B, and Wang Y
- Subjects
- Animals, Cells, Cultured, Convulsants adverse effects, Disease Models, Animal, Electroencephalography, Epilepsy chemically induced, Epilepsy genetics, Epilepsy metabolism, Genetic Predisposition to Disease, Humans, RNA, Small Interfering pharmacology, Rats, Rats, Sprague-Dawley, K Cl- Cotransporters, Down-Regulation, Epilepsy physiopathology, Symporters blood, Symporters genetics
- Abstract
GABA
A receptor-mediated inhibition depends on the maintenance of low level intracellular [Cl- ] concentration, which in adult depends on neuron specific K+ -Cl- cotransporter-2 (KCC2). Previous studies have shown that KCC2 was downregulated in both epileptic patients and various epileptic animal models. However, the temporal relationship between KCC2 downregulation and seizure induction is unclear yet. In this study, we explored the temporal relationship and the influence of KCC2 downregulation on seizure induction. Significant downregulation of plasma membrane KCC2 was directly associated with severe (Racine Score III and above) behavioral seizures in vivo, and occurred before epileptiform bursting activities in vitro induced by convulsant. Overexpression of KCC2 using KCC2 plasmid effectively enhanced resistance to convulsant-induced epileptiform bursting activities in vitro. Furthermore, suppression of membrane KCC2 expression, using shRNAKCC2 plasmid in vitro and shRNAKCC2 containing lentivirus in vivo, induced spontaneous epileptiform bursting activities in vitro and Racine III seizure behaviors accompanied by epileptic EEG in vivo. Our findings novelly demonstrated that altered expression of KCC2 is not the consequence of seizure occurrence but likely is the contributing factor.- Published
- 2017
- Full Text
- View/download PDF
22. Facile Synthesis of Nanoporous Pt-Y alloy with Enhanced Electrocatalytic Activity and Durability.
- Author
-
Cui R, Mei L, Han G, Chen J, Zhang G, Quan Y, Gu N, Zhang L, Fang Y, Qian B, Jiang X, and Han Z
- Abstract
Recently, Pt-Y alloy has displayed an excellent electrocatalytic activity for oxygen reduction reaction (ORR), and is regarded as a promising cathode catalyst for fuel cells. However, the bulk production of nanoscaled Pt-Y alloy with outstanding catalytic performance remains a great challenge. Here, we address the challenge through a simple dealloying method to synthesize nanoporous Pt-Y alloy (NP-PtY) with a typical ligament size of ~5 nm. By combining the intrinsic superior electrocatalytic activity of Pt-Y alloy with the special nanoporous structure, the NP-PtY bimetallic catalyst presents higher activity for ORR and ethanol oxidation reaction, and better electrocatalytic stability than the commercial Pt/C catalyst and nanoporous Pt alloy. The as-made NP-PtY holds great application potential as a promising electrocatalyst in proton exchange membrane fuel cells due to the advantages of facile preparation and excellent catalytic performance., Competing Interests: The authors declare no competing financial interests.
- Published
- 2017
- Full Text
- View/download PDF
23. Analysis of Microarray Data on Gene Expression and Methylation to Identify Long Non-coding RNAs in Non-small Cell Lung Cancer.
- Author
-
Feng N, Ching T, Wang Y, Liu B, Lin H, Shi O, Zhang X, Zheng M, Zheng X, Gao M, Zheng ZJ, Yu H, Garmire L, and Qian B
- Subjects
- A549 Cells, Carcinoma, Non-Small-Cell Lung metabolism, Carcinoma, Non-Small-Cell Lung pathology, Cell Line, Cell Line, Tumor, Cell Proliferation genetics, Disease Progression, Female, HEK293 Cells, Humans, Lung Neoplasms metabolism, Lung Neoplasms pathology, Male, Oligonucleotide Array Sequence Analysis methods, RNA Interference, Survival Analysis, Carcinoma, Non-Small-Cell Lung genetics, DNA Methylation, Gene Expression Profiling methods, Gene Expression Regulation, Neoplastic, Lung Neoplasms genetics, RNA, Long Noncoding genetics
- Abstract
To identify what long non-coding RNAs (lncRNAs) are involved in non-small cell lung cancer (NSCLC), we analyzed microarray data on gene expression and methylation. Gene expression chip and HumanMethylation450BeadChip were used to interrogate genome-wide expression and methylation in tumor samples. Differential expression and methylation were analyzed through comparing tumors with adjacent non-tumor tissues. LncRNAs expressed differentially and correlated with coding genes and DNA methylation were validated in additional tumor samples using RT-qPCR and pyrosequencing. In vitro experiments were performed to evaluate lncRNA's effects on tumor cells. We identified 8,500 lncRNAs expressed differentially between tumor and non-tumor tissues, of which 1,504 were correlated with mRNA expression. Two of the lncRNAs, LOC146880 and ENST00000439577, were positively correlated with expression of two cancer-related genes, KPNA2 and RCC2, respectively. High expression of LOC146880 and ENST00000439577 were also associated with poor survival. Analysis of lncRNA expression in relation to DNA methylation showed that LOC146880 expression was down-regulated by DNA methylation in its promoter. Lowering the expression of LOC146880 or ENST00000439577 in tumor cells could inhibit cell proliferation, invasion and migration. Analysis of microarray data on gene expression and methylation allows us to identify two lncRNAs, LOC146880 and ENST00000439577, which may promote the progression of NSCLC.
- Published
- 2016
- Full Text
- View/download PDF
24. CXCL13/CXCR5 enhances sodium channel Nav1.8 current density via p38 MAP kinase in primary sensory neurons following inflammatory pain.
- Author
-
Wu XB, Cao DL, Zhang X, Jiang BC, Zhao LX, Qian B, and Gao YJ
- Subjects
- Animals, Cell Count, Chemokine CXCL13 genetics, Chemokine CXCL13 metabolism, Disease Models, Animal, Freund's Adjuvant toxicity, Ganglia, Spinal cytology, Ganglia, Spinal metabolism, Inflammation physiopathology, Male, Mice, Inbred ICR, Mice, Knockout, NAV1.8 Voltage-Gated Sodium Channel genetics, Receptors, CXCR5 genetics, Sensory Receptor Cells pathology, p38 Mitogen-Activated Protein Kinases metabolism, Inflammation metabolism, NAV1.8 Voltage-Gated Sodium Channel metabolism, Pain metabolism, Receptors, CXCR5 metabolism, Sensory Receptor Cells metabolism
- Abstract
CXCL13 is a B lymphocyte chemoattractant and activates CXCR5 receptor in the immune system. Here we investigated whether CXCL13/CXCR5 mediates inflammatory pain in dorsal root ganglia (DRG) and the underlying mechanisms. Peripheral injection of complete Freund's Adjuvant (CFA) increased the expression of CXCL13 and CXCR5 in DRG neurons. In Cxcr5
-/- mice, CFA-induced pain hypersensitivity were attenuated. Whole-cell patch-clamp recording showed that the excitability of dissociated DRG neurons was increased after CFA injection or CXCL13 incubation from wild-type (WT) mice, but not from Cxcr5-/- mice. Additionally, sodium channel Nav1.8 was co-expressed with CXCR5 in dissociated DRG neurons, and the increased neuronal excitability induced by CFA or CXCL13 was reduced by Nav1.8 blocker. Intrathecal injection of Nav1.8 blocker also attenuated intrathecal injection of CXCL13-induced pain hypersensitivity. Furthermore, CXCL13 increased Nav1.8 current density in DRG neurons, which was inhibited by p38 MAP kinase inhibitor. CFA and CXCL13 increased p38 phosphorylation in the DRG of WT mice but not Cxcr5-/- mice. Finally, intrathecal p38 inhibitor alleviated CXCL13-induced pain hypersensitivity. Taken together, these results demonstrated that CXCL13, upregulated by peripheral inflammation, acts on CXCR5 on DRG neurons and activates p38, which increases Nav1.8 current density and further contributes to the maintenance of inflammatory pain.- Published
- 2016
- Full Text
- View/download PDF
25. Serological detection and analysis of anti-VP1 responses against various enteroviruses (EV) (EV-A, EV-B and EV-C) in Chinese individuals.
- Author
-
Gao C, Ding Y, Zhou P, Feng J, Qian B, Lin Z, Wang L, Wang J, Zhao C, Li X, Cao M, Peng H, Rui B, and Pan W
- Subjects
- China epidemiology, Enterovirus Infections epidemiology, Enzyme-Linked Immunosorbent Assay, Humans, Viral Proteins, Antibodies, Viral, Antibody Formation, Enterovirus immunology, Enterovirus Infections immunology
- Abstract
The overall serological prevalence of EV infections based on ELISA remains unknown. In the present study, the antibody responses against VP1 of the EV-A species (enterovirus 71 (EV71), Coxsackievirus A16 (CA16), Coxsackievirus A5 (CA5) and Coxsackievirus A6 (CA6)), of the EV-B species (Coxsackievirus B3 (CB3)), and of the EV-C species (Poliovirus 1 (PV1)) were detected and analyzed by a NEIBM (novel evolved immunoglobulin-binding molecule)-based ELISA in Shanghai blood donors. The serological prevalence of anti-CB3 VP1 antibodies was demonstrated to show the highest level, with anti-PV1 VP1 antibodies at the second highest level, and anti-CA5, CA6, CA16 and EV71 VP1 antibodies at a comparatively low level. All reactions were significantly correlated at different levels, which were approximately proportional to their sequence similarities. Antibody responses against EV71 VP1 showed obvious differences with responses against other EV-A viruses. Obvious differences in antibody responses between August 2013 and May 2014 were revealed. These findings are the first to describe the detailed information of the serological prevalence of human antibody responses against the VP1 of EV-A, B and C viruses, and could be helpful for understanding of the ubiquity of EV infections and for identifying an effective approach for seroepidemiological surveillance based on ELISA.
- Published
- 2016
- Full Text
- View/download PDF
26. Magnetoelectricity coupled exchange bias in BaMnF4.
- Author
-
Zhou S, Wang J, Chang X, Wang S, Qian B, Han Z, Xu Q, Du J, Wang P, and Dong S
- Abstract
Multiferroic BaMnF4 powder was prepared by hydrothermal method. Hysteretic field dependent magnetization curve at 5 K confirms the weak ferromagnetism aroused from the canted antiferromagnetic spins by magnetoelectric coupling. The blocking temperature of 65 K for exchange bias coincides well with the peak at 65 K in the zero-field cooled temperature-dependent magnetization curve, which has been assigned to the onset temperature of two-dimensional antiferromagnetism. An upturn kink of exchange field and coercivity with decreasing temperature was observed from 40 K to 20 K, which is consistent with the two-dimensional to three-dimensional antiferromagnetic transition at Néel temperature (~26 K). In contrast to the conventional mechanism of magnetization pinned by interfacial exchange coupling in multiphases, the exchange bias in BaMnF4 is argued to be a bulk effect in single phase, due to the magnetization pinned by the polarization through magnetoelectric coupling.
- Published
- 2015
- Full Text
- View/download PDF
27. Exploring molecular variation in Schistosoma japonicum in China.
- Author
-
Young ND, Chan KG, Korhonen PK, Min Chong T, Ee R, Mohandas N, Koehler AV, Lim YL, Hofmann A, Jex AR, Qian B, Chilton NB, Gobert GN, McManus DP, Tan P, Webster BL, Rollinson D, and Gasser RB
- Subjects
- Animals, China, Female, Genome-Wide Association Study, Humans, Male, Schistosomiasis japonica drug therapy, Schistosomiasis japonica epidemiology, Schistosomiasis japonica genetics, Genetic Variation, Genome, Helminth, Schistosoma japonicum genetics
- Abstract
Schistosomiasis is a neglected tropical disease that affects more than 200 million people worldwide. The main disease-causing agents, Schistosoma japonicum, S. mansoni and S. haematobium, are blood flukes that have complex life cycles involving a snail intermediate host. In Asia, S. japonicum causes hepatointestinal disease (schistosomiasis japonica) and is challenging to control due to a broad distribution of its snail hosts and range of animal reservoir hosts. In China, extensive efforts have been underway to control this parasite, but genetic variability in S. japonicum populations could represent an obstacle to eliminating schistosomiasis japonica. Although a draft genome sequence is available for S. japonicum, there has been no previous study of molecular variation in this parasite on a genome-wide scale. In this study, we conducted the first deep genomic exploration of seven S. japonicum populations from mainland China, constructed phylogenies using mitochondrial and nuclear genomic data sets, and established considerable variation between some of the populations in genes inferred to be linked to key cellular processes and/or pathogen-host interactions. Based on the findings from this study, we propose that verifying intraspecific conservation in vaccine or drug target candidates is an important first step toward developing effective vaccines and chemotherapies against schistosomiasis.
- Published
- 2015
- Full Text
- View/download PDF
28. Characterization of the antibody response against EV71 capsid proteins in Chinese individuals by NEIBM-ELISA.
- Author
-
Ding Y, Chen X, Qian B, Wu G, He T, Feng J, Gao C, Wang L, Wang J, Li X, Cao M, Peng H, Zhao C, and Pan W
- Subjects
- Adolescent, Adult, Antigens, Viral immunology, Child, Child, Preschool, China epidemiology, Cross Reactions immunology, Epitopes immunology, Humans, Infant, Infant, Newborn, Recombinant Proteins immunology, Seroepidemiologic Studies, Young Adult, Antibodies, Viral immunology, Capsid Proteins immunology, Enterovirus A, Human immunology, Enterovirus Infections epidemiology, Enterovirus Infections immunology, Enzyme-Linked Immunosorbent Assay methods
- Abstract
Human enterovirus 71 (EV71) has become the major pathogen of hand, foot, and mouth disease (HFMD) worldwide, while the anti-EV71 antibody responses other than neutralizing epitopes have not been characterized. In this study, EV71 capsid proteins VP1, VP3, VP0 and various VP1 antigens were constructed to analyze anti-EV71 response in severe HFMD cases, non-HFMD outpatient children and normal adults using a novel evolved immunoglobulin-binding molecule (NEIBM)-based ELISA. The high prevalence of antibody responses against all three capsid proteins was demonstrated, and anti-EV71 VP1 showed the main antibody response. Anti-EV71 VP1 antibody response was found to predominantly target to epitopes based on the common enterovirus cross-reactive sequence. Moreover, inhibition pattern against anti-EV71 VP1 reactions in three groups was obviously different. Taken together, these results firstly characterized the anti-EV71 antibody responses which are predominantly against VP1 epitopes based on common enterovirus cross-reactive sequence. This finding could be helpful for the better understanding of anti-EV71 humoral immunity and useful for seroepidemiological surveillance.
- Published
- 2015
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.