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Abstract Typhoon Maysak (Julian in the Philippines) was a powerful tropical cyclone that strongly impacted coastal regions of the Sea of Japan on 2–4 September 2020. Destructive winds, violent storm waves, and intense rainfall occurred in Japan, on the Korean Peninsula, and in Far-Eastern Russia. Devastating coastal floods caused severe damage to coastal infrastructure and to ships and boats anchored in harbours and were responsible for numerous deaths. Our study indicates that the main reason for the destructive floods was the superposition of storm surge, extreme seiches (meteorological tsunamis), and surf beats. At various sites, different types of sea level oscillations prevailed depending on the atmospheric forcing, local topographic properties, and resonant shelf/coastal zone features. The principal forcing factors of these oscillations were atmospheric pressure and wind stress, but the exact generation mechanism of each specific type of oscillation was strongly site dependent. The uniqueness of the sea level response at each site is the main challenge in our understanding of the generation process and to the mitigation of the hazardous consequences of possible future events.