43 results on '"Harada, Y."'
Search Results
2. Efficient two-step photocarrier generation in bias-controlled InAs/GaAs quantum dot superlattice intermediate-band solar cells
- Author
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Kada, T., primary, Asahi, S., additional, Kaizu, T., additional, Harada, Y., additional, Tamaki, R., additional, Okada, Y., additional, and Kita, T., additional
- Published
- 2017
- Full Text
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3. Characteristics of pebble shape and the amount of pebble abrasion measured with a replica reproduced on a curling rink.
- Author
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Yanagi S, Kameda T, Harada Y, and Sado K
- Abstract
The shape of pebbles on a curling rink was measured using a replica of the ice surface of the rink to understand the characteristics of pebbles after being in contact with stones. We focused on pebbles with flat tops for which the average shape was 3.81 mm in diameter at the lower base, 1.16 mm in diameter at the upper surface, 0.12 mm in maximum height, and 5.4° in contact angle. A scratch of about 1 µm in depth and 40 µm in width (traces of pebbles cut by a running band at the bottom of the stone) was observed on the upper surface. The pebbles were also found to have a moderate lower base diameter that preferentially contacted the nipper or stone due to its large maximum height value immediately after formation. Experiments to determine the amount of pebble abrasion associated with the passing of stones revealed that the average height of their upper surface decreased by 1 µm and the area of the upper surface increased by 0.21 mm
2 for each stone passing as the stone cut the pebbles., (© 2024. The Author(s).)- Published
- 2024
- Full Text
- View/download PDF
4. Nucleobindin 2 inhibits senescence in gastric carcinoma.
- Author
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Ishibashi Y, Itoh T, Oguri Y, Hashimura M, Yokoi A, Matsumoto T, Harada Y, Fukagawa N, Hayashi M, Ono M, Kusano C, and Saegusa M
- Subjects
- Female, Humans, Male, Apoptosis, Cell Line, Tumor, Cell Movement, Cell Proliferation, Gene Expression Regulation, Neoplastic, Prognosis, Cellular Senescence, Nucleobindins metabolism, Stomach Neoplasms pathology, Stomach Neoplasms genetics, Stomach Neoplasms metabolism
- Abstract
Here, we focused on the role of Nucleobindin 2 (NUCB2), a multifunctional protein, in gastric carcinoma (GC) progression. NUCB2 expression was investigated in 150 GC cases (20 non-invasive (pT1) and 130 invasive (pT2/pT3/pT4) tumors) by immunohistochemistry (IHC), and in situ hybridization for detection of the mRNA in 21 cases. Using GC cell lines, we determined whether NUCB2 expression was associated with specific cellular phenotypes. In GC clinical samples, NUCB2 was transcriptionally upregulated when compared to normal tissues. High NUCB2 expression was associated with clinicopathological factors including deep tumor invasion, lymphovascular invasion, lymph node metastasis, and advanced clinical stages, and was a significant independent predictor of unfavorable progression-free survival in 150 non-invasive and invasive GC patients. Similar findings were also evident in 72 invasive GC cases in which patients received post-operative chemotherapy, but not in 58 invasive tumors from patients who did not receive the chemotherapy. In cell lines, NUCB2 knockout inhibited proliferation, susceptibility to apoptosis, and migration capability by inducting cellular senescence; this was consistent with higher proliferation and apoptotic indices in the NUCB2 IHC-high compared to NUCB2 IHC-low GC cases. NUCB2-dependent inhibition of senescence in GC engenders aggressive tumor behavior by modulating proliferation, apoptosis, and migration., (© 2024. The Author(s).)
- Published
- 2024
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5. Effective generation mechanisms of tropical instability waves as represented by high-resolution coupled atmosphere-ocean prediction experiments.
- Author
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Toyoda T, Urakawa LS, Aiki H, Nakano H, Shindo E, Yoshimura H, Kawakami Y, Sakamoto K, Yamagami A, Ushijima Y, Harada Y, Kobayashi C, Tomita H, Tozuka T, and Yamanaka G
- Abstract
Cusp-shaped fluctuations of the sea surface temperature (SST) front in the tropical Pacific, now known as tropical instability waves (TIWs), were discovered by remote sensing in the 1970s. Their discovery was followed by both theoretical and analytical studies, which, along with in situ observations, identified several possible generation mechanisms. Although modeling studies have shown that TIWs strongly influence the heat budget, their influence on local variations of realistically initialized predictions is not yet understood. We here evaluate a series of medium-range (up to ~ 10 days) coupled atmosphere-ocean predictions by a coupled model with different horizontal resolutions. Observational SST, surface wind stress, heat flux, and pressure data showed that representation of temporally and spatially local variations was improved by resolving fine-scale SST variations around the initialized coarse-scale SST front fluctuations of TIWs. Our study thus demonstrates the advantage of using high-resolution coupled models for medium-range predictions. In addition, analysis of TIW energetics showed two dominant sources of energy to anticyclonic eddies: barotropic instability between equatorial zonal currents and baroclinic instability due to intense density fronts. In turn, the eddy circulation strengthened both instabilities in the resolved simulations. This revealed feedback process refines our understanding of the generation mechanisms of TIWs., (© 2023. Springer Nature Limited.)
- Published
- 2023
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6. Benefits of pancreatic parenchymal endoscopic ultrasonography in predicting microscopic precancerous lesions of pancreatic cancer.
- Author
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Yamakawa K, Inomata N, Masuda A, Takenaka M, Toyama H, Sofue K, Sakai A, Kobayashi T, Tanaka T, Tsujimae M, Ashina S, Gonda M, Abe S, Masuda S, Uemura H, Kohashi S, Nagao K, Harada Y, Miki M, Irie Y, Juri N, Shiomi H, Kanzawa M, Itoh T, Fukumoto T, and Kodama Y
- Subjects
- Humans, Endosonography methods, Retrospective Studies, Pancreas diagnostic imaging, Pancreas pathology, Metaplasia pathology, Pancreatic Neoplasms, Pancreatic Neoplasms diagnostic imaging, Pancreatic Neoplasms pathology, Precancerous Conditions diagnostic imaging, Precancerous Conditions pathology, Carcinoma in Situ pathology, Carcinoma, Pancreatic Ductal pathology
- Abstract
Pancreatic cancer primarily arises from microscopic precancerous lesions, such as pancreatic intraepithelial neoplasia (PanIN) and acinar-to-ductal metaplasia (ADM). However, no established method exists for predicting pancreatic precancerous conditions. Endoscopic ultrasonography (EUS) can detect changes in pancreatic parenchymal histology, including fibrosis. This study aimed to elucidate the relationship between pancreatic parenchymal EUS findings and microscopic precancerous lesions. We retrospectively analyzed 114 patients with pancreatobiliary tumors resected between 2010 and 2020 and evaluated the association between pancreatic parenchymal EUS findings and the number of PanIN, ADM, and pancreatic duct gland (PDG). Of the 114 patients, 33 (29.0%), 55 (48.2%), and 26 (22.8%) had normal EUS findings, hyperechoic foci/stranding without lobularity, and hyperechoic foci/stranding with lobularity, respectively. Multivariate analyses revealed that abnormal EUS findings were significantly associated with the frequency of PanIN (hyperechoic foci/stranding without lobularity: OR [95% CI] = 2.7 [1.0-7.3], with lobularity: 6.5 [1.9-22.5], P
trend = 0.01) and ADM (hyperechoic foci/stranding without lobularity: 3.1 [1.1-8.2], with lobularity: 9.7 [2.6-36.3], Ptrend = 0.003) but not with PDG (hyperechoic foci/stranding without lobularity: 2.2 [0.8-5.8], with lobularity: 3.2 [1.0-10.2], Ptrend = 0.12). We observed a trend toward a significantly higher number of precancerous lesions in the following order: normal findings, hyperechoic foci/stranding without lobularity, and hyperechoic foci/stranding with lobularity. Pancreatic parenchymal EUS findings were associated with the increased frequency of PanIN and ADM. Lobularity may help predict the increased number of precancerous lesions., (© 2023. The Author(s).)- Published
- 2023
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7. Resistance training rejuvenates aging skin by reducing circulating inflammatory factors and enhancing dermal extracellular matrices.
- Author
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Nishikori S, Yasuda J, Murata K, Takegaki J, Harada Y, Shirai Y, and Fujita S
- Subjects
- Middle Aged, Humans, Female, Skin metabolism, Extracellular Matrix metabolism, Aging, Fibroblasts metabolism, Skin Aging, Resistance Training
- Abstract
Aerobic training (AT) is suggested to be an effective anti-aging strategy for skin aging. However, the respective effects of resistance training (RT) have not been studied. Therefore, we compared the effects of AT and RT on skin aging in a 16-week intervention in 61 healthy sedentary middle-aged Japanese women. Data from 56 women were available for analysis. Both interventions significantly improved skin elasticity and upper dermal structure, and RT also improved dermal thickness. After the training intervention, expression of dermal extracellular matrix-related genes was increased in normal human primary dermal fibroblasts. AT and RT had different effects on circulating levels of factors, such as cytokines, hormones in serum, and metabolites, and RT increased dermal biglycan (BGN). To our knowledge, this is the first report to show different effects of AT and RT on skin aging and identify the key factors involved in RT-induced skin rejuvenation., (© 2023. The Author(s).)
- Published
- 2023
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8. Chemical-state distributions in charged LiCoO 2 cathode particles visualized by soft X-ray spectromicroscopy.
- Author
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Zhang W, Hosono E, Asakura D, Yuzawa H, Ohigashi T, Kobayashi M, Kiuchi H, and Harada Y
- Abstract
Lithium-ion deintercalation/intercalation during charge/discharge processes is one of the essential reactions that occur in the layered cathodes of lithium-ion batteries, and the performance of the cathode can be expressed as the sum of the reactions that occur in the local area of the individual cathode particles. In this study, the spatial distributions of the chemical states present in prototypical layered LiCoO
2 cathode particles were determined at different charging conditions using scanning transmission X-ray microscopy (STXM) with a spatial resolution of approximately 100 nm. The Co L3 - and O K-edge X-ray absorption spectroscopy (XAS) spectra, extracted from the same area of the corresponding STXM images, at the initial state as well as after charging to 4.5 V demonstrate the spatial distribution of the chemical state changes depending on individual particles. In addition to the Co L3 -edge XAS spectra, the O K-edge XAS spectra of the initial and charged LiCoO2 particles are different, indicating that both the Co and O sites participate in charge compensation during the charging process possibly through the hybridization between the Co 3d and O 2p orbitals. Furthermore, the element maps of both the Co and O sites, derived from the STXM stack images, reveal the spatial distribution of the chemical states inside individual particles after charging to 4.5 V. The element mapping analysis suggests that inhomogeneous reactions occur on the active particles and confirm the existence of non-active particles. The results of this study demonstrate that an STXM-based spatially resolved electronic structural analysis method is useful for understanding the charging and discharging of battery materials., (© 2023. The Author(s).)- Published
- 2023
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9. Impact of gene alterations on clinical outcome in young adults with myelodysplastic syndromes.
- Author
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Konishi T, Sadato D, Toya T, Hirama C, Kishida Y, Nagata A, Yamada Y, Shingai N, Shimizu H, Najima Y, Kobayashi T, Haraguchi K, Okuyama Y, Harada H, Ohashi K, Harada Y, and Doki N
- Subjects
- Humans, Young Adult, Retrospective Studies, Neoplasm Recurrence, Local, Mutation, Transcription Factors genetics, Prognosis, Myelodysplastic Syndromes genetics, Myelodysplastic Syndromes pathology, Leukemia, Myeloid, Acute genetics
- Abstract
Young adults with myelodysplastic syndrome (MDS) are rare, and the clinical significance of driver mutations has not yet been analysed. We analysed the gene mutations and copy number alterations (CNAs) in younger MDS patients using next-generation sequencing, targeting 68 genes that were recurrently mutated in myeloid malignancies, to investigate the correlation between their genetic alterations and clinical outcomes. We enrolled 55 patients retrospectively (aged < 50 years). At least one mutation was detected in 56% of the patients. The most frequently mutated genes were ASXL1 and RUNX1, 13% each. We defined higher-risk patients as those with ≥ 2 mutations, except for SF3B1 mutation, and/or CNA. The 3-year overall survival (OS) in patients with a higher-risk was lower than that in those with a lower-risk (50.8% vs. 71.8%, P = 0.024). Among the 44 transplant recipients, patients with higher-risk had a significantly lower OS and tended to have a higher cumulative incidence of relapse (CIR) than those with a lower-risk (3-year OS: 38.0% vs. 64.4%, P = 0.039; 3-year CIR: 44.0% vs. 24.1%, P = 0.076). Our results showed that genetic aberrations can predict clinical outcomes in younger MDS patients, despite the low rate of genetic mutations., (© 2023. The Author(s).)
- Published
- 2023
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10. Generation of myocyte agonal Ca 2+ waves and contraction bands in perfused rat hearts following irreversible membrane permeabilisation.
- Author
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Morishita Y, Tamura S, Mochizuki K, Harada Y, Takamatsu T, Hosoi H, and Tanaka H
- Subjects
- Rats, Animals, Mitochondria, Sarcomeres, Calcium metabolism, Myocardial Contraction, Myocytes, Cardiac metabolism, Adenosine Triphosphate metabolism
- Abstract
Although irreversible cardiomyocyte injury provokes intracellular Ca
2+ ([Ca2+ ]i ) overload, the underlying dynamics of this response and its effects on cellular morphology remain unknown. We therefore visualised rapid-scanning confocal fluo4-[Ca2+ ]i dynamics and morphology of cardiomyocytes in Langendorff-perfused rat hearts following saponin-membrane permeabilisation. Our data demonstrate that 0.4% saponin-treated myocytes immediately exhibited high-frequency Ca2+ waves (131.3 waves/min/cell) with asynchronous, oscillatory contractions having a mean propagation velocity of 117.8 μm/s. These waves slowly decreased in frequency, developed a prolonged decay phase, and disappeared in 10 min resulting in high-static, fluo4-fluorescence intensity. The myocytes showing these waves displayed contraction bands, i.e., band-like actin-fibre aggregates with disruption of sarcomeric α-actinin. The contraction bands were not attenuated by the abolition of Ca2+ waves under pretreatment with ryanodine plus thapsigargin, but were partially attenuated by the calpain inhibitor MDL28170, while mechanical arrest of the myocytes by 2,3-butanedione monoxime completely attenuated contraction-band formation. The depletion of adenosine 5'-triphosphate by the mitochondrial electron uncoupler carbonyl cyanide 4-trifluoromethoxy phenylhydrazone also attenuated Ca2+ waves and contraction bands. Overall, saponin-induced myocyte [Ca2+ ]i overload provokes agonal Ca2+ waves and contraction bands. Contraction bands are not the direct consequence of the waves but are caused by cross-bridge interactions of the myocytes under calpain-mediated proteolysis., (© 2023. The Author(s).)- Published
- 2023
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11. Pharmacological effects of caffeine on ventilation in adult zebrafish under free-swimming conditions.
- Author
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Harada Y, Soh Z, Wakitani S, Yoshida M, and Tsuji T
- Subjects
- Animals, Swimming, Hydrocortisone pharmacology, Respiration, Behavior, Animal, Zebrafish physiology, Caffeine pharmacology
- Abstract
The zebrafish is widely used as a model in biological studies. In particular, the heart rate and cortisol levels of zebrafish are commonly measured to elucidate the pharmacological effects of chemical substances. Meanwhile, although ventilation is also an important physiological index reflecting emotion-like states, few studies have evaluated the effects of chemicals on ventilation in adult zebrafish. In this study, we assessed whether it is possible to evaluate the pharmacological effects elicited by caffeine in adult zebrafish under free-swimming conditions. We measured the ventilation in adult zebrafish exposed to multiple concentrations of caffeine under restraint and free-swimming conditions and evaluated the pharmacological effects of caffeine using linear mixed model analysis. In addition, results of electrocardiogram analysis and swimming speeds were compared with those in previous reports to ensure that an appropriate dose of caffeine was administered. Under restraint conditions, caffeine significantly decreased heart rate and increased ventilation in a concentration-dependent manner. Under free-swimming conditions, the ventilation rate significantly increased with increasing caffeine concentration. These results indicate that the pharmacological effects elicited by chemicals on ventilation can be evaluated in free-swimming zebrafish., (© 2022. The Author(s).)
- Published
- 2022
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12. Advantage of endoscopic papillectomy for ampullary tumors as an alternative treatment for pancreatoduodenectomy.
- Author
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Abe S, Sakai A, Masuda A, Miki M, Harada Y, Nagao K, Inomata N, Kohashi S, Uemura H, Masuda S, Ashina S, Gonda M, Yamakawa K, Tsujimae M, Yamada Y, Tanaka T, Kobayashi T, Nakano R, Shiomi H, Tsugawa D, Yanagimoto H, Ajiki T, Kanzawa M, Fukumoto T, Itoh T, and Kodama Y
- Subjects
- Humans, Pancreaticoduodenectomy adverse effects, Retrospective Studies, Sphincterotomy, Endoscopic adverse effects, Treatment Outcome, Adenoma pathology, Ampulla of Vater pathology, Ampulla of Vater surgery, Common Bile Duct Neoplasms pathology, Duodenal Neoplasms pathology, Pancreatic Neoplasms pathology
- Abstract
Endoscopic papillectomy for early ampullary tumors is considered a minimally invasive and useful alternative to pancreatoduodenectomy; however, its indications remain unclear. This study aimed to clarify the advantages of endoscopic papillectomy by investigating the clinical outcomes of patients who underwent endoscopic papillectomy or pancreatoduodenectomy for early ampullary tumors. Patients diagnosed with early ampullary tumors (adenoma, Tis, T1a) who underwent endoscopic papillectomy or pancreatoduodenectomy between June 2008 and October 2019 were included, and their clinical outcomes were analyzed. Seventy-four patients (34 patients with adenomas and 40 patients with adenocarcinomas) were divided into two groups, namely endoscopic papillectomy (n = 43) and pancreatoduodenectomy (n = 31). The estimated 5-year overall survival rate of all early ampullary tumors was 92%. Complete resection rate was significantly lower for endoscopic papillectomy patients versus pancreatoduodenectomy patients (48.8% vs. 100%; p < 0.001). Recurrence was more common in the endoscopic papillectomy group compared to the pancreatoduodenectomy group (16.3% vs. 3.2%; p = 0.128), but all recurrences were controllable by endoscopic treatment. The median length of hospital stay for the endoscopic papillectomy group was significantly shorter compared to the endoscopic papillectomy group (11 days vs. 42 days; p < 0.001). The Comprehensive Complication Index was significantly lower in the endoscopic papillectomy group compared to the pancreatoduodenectomy group (14.8 vs 22.6%; p = 0.002). Endoscopic papillectomy for early ampullary tumors is useful and may be an alternative treatment for pancreatoduodenectomy in selected cases., (© 2022. The Author(s).)
- Published
- 2022
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13. Automatic worm detection to solve overlapping problems using a convolutional neural network.
- Author
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Mori S, Tachibana Y, Suzuki M, and Harada Y
- Subjects
- Neural Networks, Computer
- Abstract
The nematode Caenorhabditis elegans is a powerful experimental model to investigate vital functions of higher organisms. We recently established a novel method, named "pond assay for the sensory systems (PASS)", that dramatically improves both the evaluation accuracy of sensory response of worms and the efficiency of experiments. This method uses many worms in numbers that are impractical to count manually. Although several automated detection systems have been introduced, detection of overlapped worms remains difficult. To overcome this problem, we developed an automated worm detection system based on a deep neural network (DNN). Our DNN was based on a "YOLOv4″ one-stage detector with one-class classification (OCC) and multi-class classification (MCC). The OCC defined a single class for worms, while the MCC defined four classes for the number of overlapped worms. For the training data, a total of 2000 model sub-images were prepared by manually drawing square worm bounding boxes from 150 images. To make simulated images, a total of 10-80 model images for each class were randomly selected and randomly placed on a simulated microscope field. A total of 19,000 training datasets and 1000 validation datasets with a ground-truth bounding-box were prepared. We evaluated detection accuracy using 150 images, which were different from the training data. Evaluation metrics were detection error, precision, recall, and average precision (AP). Precision values were 0.91 for both OCC and MCC. However, the recall value for MCC (= 0.93) was higher than that for OCC (= 0.79). The number of detection errors for OCC increased with increasing the ground truth; however, that for MCC was independent of the ground truth. AP values were 0.78 and 0.90 for the OCC and the MCC, respectively. Our worm detection system with MCC provided better detection accuracy for large numbers of worms with overlapping positions than that with the OCC., (© 2022. The Author(s).)
- Published
- 2022
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14. BMP signaling suppresses Gemc1 expression and ependymal differentiation of mouse telencephalic progenitors.
- Author
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Omiya H, Yamaguchi S, Watanabe T, Kuniya T, Harada Y, Kawaguchi D, and Gotoh Y
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- Animals, Cell Cycle Proteins metabolism, Embryonic Stem Cells metabolism, Ependyma metabolism, Mice, Mice, Inbred C57BL, Mice, Inbred ICR, Neural Stem Cells metabolism, Neurogenesis, Telencephalon metabolism, Bone Morphogenetic Proteins metabolism, Cell Cycle Proteins antagonists & inhibitors, Cell Differentiation, Embryonic Stem Cells cytology, Ependyma cytology, Neural Stem Cells cytology, Telencephalon cytology
- Abstract
The lateral ventricles of the adult mammalian brain are lined by a single layer of multiciliated ependymal cells, which generate a flow of cerebrospinal fluid through directional beating of their cilia as well as regulate neurogenesis through interaction with adult neural stem cells. Ependymal cells are derived from a subset of embryonic neural stem-progenitor cells (NPCs, also known as radial glial cells) that becomes postmitotic during the late embryonic stage of development. Members of the Geminin family of transcriptional regulators including GemC1 and Mcidas play key roles in the differentiation of ependymal cells, but it remains largely unclear what extracellular signals regulate these factors and ependymal differentiation during embryonic and early-postnatal development. We now show that the levels of Smad1/5/8 phosphorylation and Id1/4 protein expression-both of which are downstream events of bone morphogenetic protein (BMP) signaling-decline in cells of the ventricular-subventricular zone in the mouse lateral ganglionic eminence in association with ependymal differentiation. Exposure of postnatal NPC cultures to BMP ligands or to a BMP receptor inhibitor suppressed and promoted the emergence of multiciliated ependymal cells, respectively. Moreover, treatment of embryonic NPC cultures with BMP ligands reduced the expression level of the ependymal marker Foxj1 and suppressed the emergence of ependymal-like cells. Finally, BMP ligands reduced the expression levels of Gemc1 and Mcidas in postnatal NPC cultures, whereas the BMP receptor inhibitor increased them. Our results thus implicate BMP signaling in suppression of ependymal differentiation from NPCs through regulation of Gemc1 and Mcidas expression during embryonic and early-postnatal stages of mouse telencephalic development.
- Published
- 2021
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15. The importance of the surface roughness and running band area on the bottom of a stone for the curling phenomenon.
- Author
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Kameda T, Shikano D, Harada Y, Yanagi S, and Sado K
- Abstract
Curling is a sport in which players deliver a cylindrical granite stone on an ice sheet in a curling hall toward a circular target located 28.35 m away. The stone gradually moves laterally, or curls, as it slides on ice. Although several papers have been published to propose a mechanism of the curling phenomenon for the last 100 years, no established theory exists on the subject, because detailed measurements on a pebbled ice surface and a curling stone sliding on ice and detailed theoretical model calculations have yet to be available. Here we show using our precise experimental data that the curl distance is primarily determined by the surface roughness and the surface area of the running band on the bottom of a stone and that the ice surface condition has smaller effects on the curl distance. We also propose a possible mechanism affecting the curling phenomena of a curing stone based on our results. We expect that our findings will form the basis of future curling theories and model calculations regarding the curling phenomenon of curling stones. Using the relation between the curl distance and the surface roughness of the running band in this study, the curl distance of a stone sliding on ice in every curling hall can be adjusted to an appropriate value by changing the surface roughness of the running band on the bottom of a stone.
- Published
- 2020
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16. Molecular Orientation in a Variable-Focus Liquid Crystal Lens Induced by Ultrasound Vibration.
- Author
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Harada Y, Koyama D, Fukui M, Emoto A, Nakamura K, and Matsukawa M
- Abstract
A method to estimate orientation direction of liquid crystal molecules three-dimensionally under ultrasound excitation was proposed and the relationship between the ultrasound vibration and the molecular orientation was discussed. Our group have reported a technique to control orientation direction of liquid crystal molecules using ultrasound vibration which could be applied to an optical variable-focus liquid crystal lens. The lens consisted of a liquid crystal layer sandwiched by two glass circular discs and a piezoelectric ring. Ultrasound vibration induces change in the refractive index of the lens, enabling the variable-focus function. The three-dimensional orientation direction of the liquid crystal molecules in the lens was predicted from the transmitted light distributions under the crossed Nicol conditions. The liquid crystal molecules were inclined from vertical alignment by the ultrasound vibration, and larger ultrasound vibration gave larger inclination of the molecules. There was a strong correlation between the distributions of ultrasound vibration and the liquid crystal molecular orientation; the molecular orientation was changed remarkably between the antinodal and nodal parts of the ultrasound flexural vibration on the glass plate and the molecules aligned towards the antinode.
- Published
- 2020
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17. Deep-UV excitation fluorescence microscopy for detection of lymph node metastasis using deep neural network.
- Author
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Matsumoto T, Niioka H, Kumamoto Y, Sato J, Inamori O, Nakao R, Harada Y, Konishi E, Otsuji E, Tanaka H, Miyake J, and Takamatsu T
- Subjects
- Algorithms, Biopsy, Fluorescent Antibody Technique, Humans, Image Interpretation, Computer-Assisted, Image Processing, Computer-Assisted, Immunohistochemistry, Machine Learning, Software, Lymph Nodes pathology, Lymphatic Metastasis pathology, Microscopy, Fluorescence, Neural Networks, Computer
- Abstract
Deep-UV (DUV) excitation fluorescence microscopy has potential to provide rapid diagnosis with simple technique comparing to conventional histopathology based on hematoxylin and eosin (H&E) staining. We established a fluorescent staining protocol for DUV excitation fluorescence imaging that has enabled clear discrimination of nucleoplasm, nucleolus, and cytoplasm. Fluorescence images of metastasis-positive/-negative lymph nodes of gastric cancer patients were used for patch-based training with a deep neural network (DNN) based on Inception-v3 architecture. The performance on small patches of the fluorescence images was comparable with that of H&E images. Gradient-weighted class activation mapping analysis revealed the areas where the trained model identified metastatic lesions in the images containing cancer cells. We extended the method to large-size image analysis enabling accurate detection of metastatic lesions. We discuss usefulness of DUV excitation fluorescence imaging with the aid of DNN analysis, which is promising for assisting pathologists in assessment of lymph node metastasis.
- Published
- 2019
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18. Spatiotemporal Characteristics of 360-Degree Basic Attention.
- Author
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Harada Y and Ohyama J
- Abstract
The spatiotemporal characteristics of basic attention are important for understanding attending behaviours in real-life situations, and they are useful for evaluating the accessibility of visual information. However, although people are encircled by their 360-degree surroundings in real life, no study has addressed the general characteristics of attention to 360-degree surroundings. Here, we conducted an experiment using virtual reality technology to examine the spatiotemporal characteristics of attention in a highly controlled basic visual context consisting of a 360-degree surrounding. We measured response times and gaze patterns during the 360-degree search task and examined the spatial distribution of attention and its temporal variations in a 360-degree environment based on the participants' physical position. Data were collected from both younger adults and older adults to consider age-related differences. The results showed the fundamental spatiotemporal characteristics of 360-degree attention, which can be used as basic criteria to analyse the structure of exogenous effects on attention in complex 360-degree surroundings in real-life situations. For practical purposes, we created spherical criteria maps of 360-degree attention, which are useful for estimating attending behaviours to 360-degree environmental information or for evaluating visual information design in living environments, workspaces, or other real-life contexts.
- Published
- 2019
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19. A PQ-loop protein Ypq2 is involved in the exchange of arginine and histidine across the vacuolar membrane of Saccharomyces cerevisiae.
- Author
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Kawano-Kawada M, Manabe K, Ichimura H, Kimura T, Harada Y, Ikeda K, Tanaka S, Kakinuma Y, and Sekito T
- Subjects
- Adenosine Triphosphate metabolism, Amino Acid Motifs, Amino Acid Sequence, Membrane Transport Proteins chemistry, Membrane Transport Proteins genetics, Mutation genetics, Proline metabolism, Protons, Saccharomyces cerevisiae Proteins chemistry, Saccharomyces cerevisiae Proteins genetics, Arginine metabolism, Histidine metabolism, Intracellular Membranes metabolism, Membrane Transport Proteins metabolism, Saccharomyces cerevisiae metabolism, Saccharomyces cerevisiae Proteins metabolism, Vacuoles metabolism
- Abstract
In nutrient-rich conditions, basic amino acids are actively accumulated into the vacuoles by H
+ -coupled transporters in Saccharomyces cerevisiae. In addition to the H+ -coupled systems, the existence of an exchanger for arginine and histidine was indicated by kinetic analysis using isolated vacuolar membrane vesicles; however, the gene(s) involved in the activity has not been identified. Here, we show that the uptake activity of arginine driven by an artificially imposed histidine gradient decreased significantly by the disruption of the gene encoding vacuolar PQ-loop protein Ypq2, but not by those of Ypq1 and Ypq3. The exchange activity was restored by the expression of YPQ2. Furthermore, the substitution of a conserved proline residue, Pro29, in Ypq2 greatly decreased the exchange activity. These results suggest that Ypq2 is responsible for the exchange activity of arginine and histidine across the vacuolar membrane, and the conserved proline residue in the PQ-loop motif is required for the activity.- Published
- 2019
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20. Microscopic photoelectron analysis of single crystalline LiCoO 2 particles during the charge-discharge in an all solid-state lithium ion battery.
- Author
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Akada K, Sudayama T, Asakura D, Kitaura H, Nagamura N, Horiba K, Oshima M, Hosono E, and Harada Y
- Abstract
We report synchrotron-based operando soft X-ray microscopic photoelectron spectroscopy under charge-discharge control of single crystalline LiCoO
2 (LCO) particles as an active electrode material for an all solid-state lithium-ion battery (LIB). Photoelectron mapping and the photoelectron spectrum of a selected microscopic region are obtained by a customized operando cell for LIBs. During the charge process, a more effective Li extraction from a side facet of the single crystalline LCO particle than from the central part is observed, which ensures the reliability of the system as an operando microscopic photoelectron analyzer that can track changes in the electronic structure of a selected part of the active particle. Based on these assessments, the no drastic change in the Co 2p XPS spectra during charge-discharge of LCO supports that the charge-polarization may occur at the oxygen side by strong hybridization between Co 3d and O 2p orbitals. The success of tracking the electronic-structure change at each facet of a single crystalline electrode material during charge-discharge is a major step toward the fabrication of innovative active electrode materials for LIBs.- Published
- 2019
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- View/download PDF
21. A TLR-CXCL1 pathway in DRG neurons induces neutrophil accumulation in the DRG and mechanical allodynia in EAE mice.
- Author
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Zhang J, Harada Y, and Hayashi Y
- Subjects
- Animals, Chemokine CXCL1 genetics, Disease Models, Animal, Disease Susceptibility, Encephalomyelitis, Autoimmune, Experimental, Gene Expression Regulation, Hyperalgesia physiopathology, Mice, Myelin-Oligodendrocyte Glycoprotein pharmacology, Peptide Fragments pharmacology, Signal Transduction, Toll-Like Receptors genetics, Chemokine CXCL1 metabolism, Ganglia, Spinal metabolism, Hyperalgesia etiology, Hyperalgesia metabolism, Neutrophils metabolism, Sensory Receptor Cells metabolism, Toll-Like Receptors metabolism
- Abstract
Multiple sclerosis (MS) is a potentially disabling disease of the central nervous system. Approximately half of the patients with MS experience severe pain; however, currently available therapeutics provide only insufficient relief. The mechanisms underlying the generation of neuropathic pain in patients with MS are not fully understood. Recently, we found that neutrophil elastase from accumulated neutrophils in the dorsal root ganglion (DRG) sensitizes DRG neurons and induces mechanical allodynia in a mouse model of experimental autoimmune encephalomyelitis (EAE). However, the mechanism underlying neutrophil accumulation in the DRG after myelin oligodendrocyte glycoprotein (MOG
35-55 , immunogenic peptide) immunization remains unclear. Here, we found that C-X-C motif ligand 1 (CXCL1) was upregulated in DRG neurons after MOG35-55 immunization. Increased expression of CXCL1 protein was also observed in primary cultured DRG neurons treated with MOG35-55 , which was mediated through toll-like receptor 4 (TLR4). Gene silencing of TLR4 or CXCL1 in DRG neurons significantly attenuated neutrophil accumulation in the DRG and mechanical allodynia during the preclinical phase of EAE (around day 5 after immunization). Our results thus suggest that a TLR4-CXCL1 pathway in DRG neurons triggers neutrophil recruitment in the DRG and subsequent mechanical allodynia in response to MOG35-55 .- Published
- 2019
- Full Text
- View/download PDF
22. Evolutionary history of the medaka long-wavelength sensitive genes and effects of artificial regression by gene loss on behavioural photosensitivity.
- Author
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Harada Y, Matsuo M, Kamei Y, Goto M, and Fukamachi S
- Subjects
- Adaptation, Ocular, Amino Acid Sequence, Animals, Evolution, Molecular, Fish Proteins chemistry, Gene Deletion, Gene Duplication, Light, Oryzias physiology, Phylogeny, Rod Opsins chemistry, Fish Proteins genetics, Oryzias genetics, Rod Opsins genetics
- Abstract
Tandem gene duplication has led to an expansion of cone-opsin repertoires in many fish, but the resulting functional advantages have only been conjectured without empirical demonstration. Medaka (Oryzias latipes and O. sakaizumii) have eight (two red, three green, two blue, and one violet) cone opsin genes. Absorbance maxima (λ
max ) of the proteins vary from 356 nm to 562 nm, but those of the red opsins (long-wavelength sensitive; LWS) are nearly identical, obscuring the necessity of their coexistence. Here, we compared the LWSa and LWSb loci of these sister species and found that the gene duplication occurred long before the latipes-sakaizumii speciation (4-18 million years ago), and the high sequence similarity between the paralogues is the result of at least two events of gene conversion. These repetitive gene conversions would indicate the importance for medaka of retaining two identical LWSs in the genome. However, a newly established medaka mutant with a single LWS showed no defect in LWS expression or behavioural red-light sensitivity, demonstrating functional redundancy of the paralogs. Thus, as with many other genes after whole-genome duplication, the redundant LWS might be on the way to being lost from the current cone opsin repertoire. Thus, non-allelic gene conversion may temporarily provide an easier and more frequent solution than gene loss for reducing genetic diversity, which should be considered when assessing history of gene evolution by phylogenetic analyses.- Published
- 2019
- Full Text
- View/download PDF
23. Uric acid enhances alteplase-mediated thrombolysis as an antioxidant.
- Author
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Kikuchi K, Setoyama K, Tanaka E, Otsuka S, Terashi T, Nakanishi K, Takada S, Sakakima H, Ampawong S, Kawahara KI, Nagasato T, Hosokawa K, Harada Y, Yamamoto M, Kamikokuryo C, Kiyama R, Morioka M, Ito T, Maruyama I, and Tancharoen S
- Subjects
- Adult, Animals, Antioxidants therapeutic use, Area Under Curve, Disease Models, Animal, Endothelial Cells cytology, Endothelial Cells drug effects, Endothelial Cells metabolism, Female, Fibrin Fibrinogen Degradation Products analysis, Humans, Ischemia drug therapy, Ischemia pathology, Male, Microscopy, Video, Oxidative Stress drug effects, ROC Curve, Rats, Rats, Sprague-Dawley, Tissue Plasminogen Activator therapeutic use, Uric Acid therapeutic use, Young Adult, Antioxidants pharmacology, Fibrinolysis drug effects, Tissue Plasminogen Activator pharmacology, Uric Acid pharmacology
- Abstract
Uric acid (UA) therapy may prevent early ischemic worsening after acute stroke in thrombolysis patients. The aim of this study was to examine the influence of UA on the thrombolytic efficacy of alteplase in human blood samples by measuring thrombolysis under flow conditions using a newly developed microchip-based flow-chamber assay. Human blood samples from healthy volunteers were exposed to UA, alteplase, or a combination of UA and alteplase. Whole blood and platelet-rich plasma were perfused over a collagen- and thromboplastin-coated microchip, and capillary occlusion was monitored with a video microscope and flow-pressure sensor. The area under the curve (extent of thrombogenesis or thrombolysis) at 30 minutes was 92% lower in the UA-alteplase-treated group compared with the alteplase-treated group. D-dimers were measured to evaluate these effects in human platelet-poor plasma samples. Although hydrogen peroxide significantly decreased the elevation of D-dimers by alteplase, UA significantly inhibited the effect of hydrogen peroxide. Meanwhile, rat models of thromboembolic cerebral ischemia were treated with either alteplase or UA-alteplase combination therapy. Compared with alteplase alone, the combination therapy reduced the infarct volume and inhibited haemorrhagic transformation. UA enhances alteplase-mediated thrombolysis, potentially by preventing oxidative stress, which inhibits fibrinolysis by alteplase in thrombi.
- Published
- 2018
- Full Text
- View/download PDF
24. Label-free Evaluation of Myocardial Infarct in Surgically Excised Ventricular Myocardium by Raman Spectroscopy.
- Author
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Yamamoto T, Minamikawa T, Harada Y, Yamaoka Y, Tanaka H, Yaku H, and Takamatsu T
- Subjects
- Cardiac Surgical Procedures, Cardiomyopathies pathology, Cardiomyopathies surgery, Diagnosis, Differential, Feasibility Studies, Heart Ventricles pathology, Heart Ventricles surgery, Humans, Image Interpretation, Computer-Assisted methods, Models, Cardiovascular, Myocardial Infarction pathology, Myocardial Infarction surgery, Predictive Value of Tests, Prognosis, Plastic Surgery Procedures, Sensitivity and Specificity, Software, Cardiomyopathies diagnostic imaging, Heart Ventricles diagnostic imaging, Myocardial Infarction diagnostic imaging, Myocardium pathology, Spectrum Analysis, Raman methods
- Abstract
Understanding the viability of the ischemic myocardial tissue is a critical issue in determining the appropriate surgical procedure for patients with chronic heart failure after myocardial infarction (MI). Conventional MI evaluation methods are; however, preoperatively performed and/or give an indirect information of myocardial viability such as shape, color, and blood flow. In this study, we realize the evaluation of MI in patients undergoing cardiac surgery by Raman spectroscopy under label-free conditions, which is based on intrinsic molecular constituents related to myocardial viability. We identify key signatures of Raman spectra for the evaluation of myocardial viability by evaluating the infarct border zone myocardium that were excised from five patients under surgical ventricular restoration. We also obtain a prediction model to differentiate the infarcted myocardium from the non-infarcted myocardium by applying partial least squares regression-discriminant analysis (PLS-DA) to the Raman spectra. Our prediction model enables identification of the infarcted tissues and the non-infarcted tissues with sensitivities of 99.98% and 99.92%, respectively. Furthermore, the prediction model of the Raman images of the infarct border zone enabled us to visualize boundaries between these distinct regions. Our novel application of Raman spectroscopy to the human heart would be a useful means for the detection of myocardial viability during surgery.
- Published
- 2018
- Full Text
- View/download PDF
25. Characterization of membrane penetration and cytotoxicity of C9orf72-encoding arginine-rich dipeptides.
- Author
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Kanekura K, Harada Y, Fujimoto M, Yagi T, Hayamizu Y, Nagaoka K, and Kuroda M
- Subjects
- Amino Acid Sequence, C9orf72 Protein chemistry, Cell Death drug effects, Cell Membrane drug effects, Cell Nucleolus metabolism, Dipeptides chemistry, HEK293 Cells, HeLa Cells, Humans, Hydrogen-Ion Concentration, Protein Biosynthesis drug effects, RNA metabolism, Arginine metabolism, C9orf72 Protein metabolism, C9orf72 Protein toxicity, Cell Membrane metabolism, Cell-Penetrating Peptides metabolism, Cell-Penetrating Peptides toxicity, Dipeptides metabolism
- Abstract
Cell-penetrating peptides (CPPs) including arginine-rich peptides are attracting a lot of attention due to their potential as a novel intracellular drug delivery tool without substantial toxicity. On the other hand, disease-associated arginine-rich CPPs, such as poly-PR and poly-GR translated from C9orf72 gene, also efficiently enter neuronal cells and then kill them. Although both non-harmful CPPs and harmful poly-PR/GR penetrate the plasma membrane using same arginine residues, little is known about the factors which determine the toxicity of the pathogenic CPPs. Here, we show that poly-PR and poly-GR, but not other Arg-rich CPPs, specifically distributed to nucleolus via interaction with RNA. Importantly, C9orf72-dipeptides, but not other Arg-rich CPPs, caused inhibition of protein translation and cell death. Raising extracellular pH enhanced the cell penetration of poly-PR. The repeat number of (PR) affected the secondary structure and determined the intracellular delivery rate and neurotoxicity, and enforced intracellular delivery of non-penetrating short poly-PR peptide caused cell death, suggesting that modulation of extracellular environment to inhibit the uptake of Arg-rich dipeptides might be a drug target against poly-PR/GR-mediated neurotoxicity.
- Published
- 2018
- Full Text
- View/download PDF
26. Assessing the Nature of the Distribution of Localised States in Bulk GaAsBi.
- Author
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Wilson T, Hylton NP, Harada Y, Pearce P, Alonso-Álvarez D, Mellor A, Richards RD, David JPR, and Ekins-Daukes NJ
- Abstract
A comprehensive assessment of the nature of the distribution of sub band-gap energy states in bulk GaAsBi is presented using power and temperature dependent photoluminescence spectroscopy. The observation of a characteristic red-blue-red shift in the peak luminescence energy indicates the presence of short-range alloy disorder in the material. A decrease in the carrier localisation energy demonstrates the strong excitation power dependence of localised state behaviour and is attributed to the filling of energy states furthest from the valence band edge. Analysis of the photoluminescence lineshape at low temperature presents strong evidence for a Gaussian distribution of localised states that extends from the valence band edge. Furthermore, a rate model is employed to understand the non-uniform thermal quenching of the photoluminescence and indicates the presence of two Gaussian-like distributions making up the density of localised states. These components are attributed to the presence of microscopic fluctuations in Bi content, due to short-range alloy disorder across the GaAsBi layer, and the formation of Bi related point defects, resulting from low temperature growth.
- Published
- 2018
- Full Text
- View/download PDF
27. Enrichment of ODMR-active nitrogen-vacancy centres in five-nanometre-sized detonation-synthesized nanodiamonds: Nanoprobes for temperature, angle and position.
- Author
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Sotoma S, Terada D, Segawa TF, Igarashi R, Harada Y, and Shirakawa M
- Abstract
The development of sensors to estimate physical properties, and their temporal and spatial variation, has been a central driving force in scientific breakthroughs. In recent years, nanosensors based on quantum measurements, such as nitrogen-vacancy centres (NVCs) in nanodiamonds, have been attracting much attention as ultrastable, sensitive, accurate and versatile physical sensors for quantitative cellular measurements. However, the nanodiamonds currently available for use as sensors have diameters of several tens of nanometres, much larger than the usual size of a protein. Therefore, their actual applications remain limited. Here we show that NVCs in an aggregation of 5-nm-sized detonation-synthesized nanodiamond treated by Krüger's surface reduction (termed DND-OH) retains the same characteristics as observed in larger diamonds. We show that the negative charge at the NVC are stabilized, have a relatively long T
2 spin relaxation time of up to 4 μs, and are applicable to thermosensing, one-degree orientation determination and nanometric super-resolution imaging. Our results clearly demonstrate the significant potential of DND-OH as a physical sensor. Thus, DND-OH will raise new possibilities for spatiotemporal monitoring of live cells and dynamic biomolecules in individual cells at single-molecule resolution.- Published
- 2018
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- View/download PDF
28. Increasing conversion efficiency of two-step photon up-conversion solar cell with a voltage booster hetero-interface.
- Author
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Asahi S, Kusaki K, Harada Y, and Kita T
- Abstract
Development of high-efficiency solar cells is one of the attractive challenges in renewable energy technologies. Photon up-conversion can reduce the transmission loss and is one of the promising concepts which improve conversion efficiency. Here we present an analysis of the conversion efficiency, which can be increased by up-conversion in a single-junction solar cell with a hetero-interface that boosts the output voltage. We confirm that an increase in the quasi-Fermi gap and substantial photocurrent generation result in a high conversion efficiency.
- Published
- 2018
- Full Text
- View/download PDF
29. Direct conversion of human fibroblasts to brown adipocytes by small chemical compounds.
- Author
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Takeda Y, Harada Y, Yoshikawa T, and Dai P
- Subjects
- Adipocytes, Brown metabolism, Adult, Biomarkers, Cells, Cultured, Female, Fibroblasts metabolism, Gene Expression, Humans, Immunohistochemistry, Male, Middle Aged, Mitochondria drug effects, Mitochondria genetics, Mitochondria metabolism, Organ Specificity, Oxygen Consumption, Uncoupling Protein 1 genetics, Uncoupling Protein 1 metabolism, Adipocytes, Brown cytology, Cell Transdifferentiation drug effects, Fibroblasts cytology, Fibroblasts drug effects
- Abstract
Brown adipocytes play an important role in human energy metabolism and prevention of obesity and diabetes. Induced pluripotent stem cells (iPSCs) represent a promising source for brown adipocytes; however, exogenous gene induction is generally required for iPSCs generation, which might cause undesired effects particularly in long-term treatment after transplantation. We have previously reported a cocktail of six small chemical compounds that enables a conversion of human fibroblasts into chemical compound-induced neuronal cells (CiNCs). Here, we report that modified combinations of the chemical compounds and rosiglitazone, a PPARγ agonist, afforded direct conversion of human fibroblasts into brown adipocytes. The chemical compound-induced brown adipocytes (ciBAs) exhibit induction of human brown adipocyte-specific genes such as Ucp1, Ckmt1, Cited1 and other adipocyte-specific genes such as Fabp4, AdipoQ, and Pparγ. Treatment with either isoproterenol or Forskolin further induced the expression of Ucp1, suggesting that β adrenergic receptor signalling in ciBAs could be functional for induction of thermogenic genes. Moreover, oxygen consumption rates were elevated in ciBAs along with increase of cellular mitochondria. Our findings might provide an easily accessible approach for generating human brown adipocytes from fibroblasts and offer therapeutic potential for the management of obesity, diabetes, and related metabolic disorders.
- Published
- 2017
- Full Text
- View/download PDF
30. Wetting Induced Oxidation of Pt-based Nano Catalysts Revealed by In Situ High Energy Resolution X-ray Absorption Spectroscopy.
- Author
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Cui YT, Harada Y, Niwa H, Hatanaka T, Nakamura N, Ando M, Yoshida T, Ishii K, Matsumura D, Oji H, Ofuchi H, and Oshima M
- Abstract
In situ high energy resolution fluorescence detection X-ray absorption spectroscopy (HERFD-XAS) was used to systematically evaluate interactions of H
2 O and O2 adsorbed on Pt and Pt3 Co nanoparticle catalysts in different particle sizes. The systematic increase in oxidation due to adsorption of different species (H2 O adsorption2 adsorption 2 + H 2 O coadsorption) suggests that cooperative behavior between O2 and H2 O adsorptions is responsible for the overpotential induced by hydrated species in fuel cells. From the alloying and particle size effects, it is found that both strength of O2 /H2 O adsorption and their cooperative effect upon coadsorption are responsible for the specific activity of Pt catalysts.- Published
- 2017
- Full Text
- View/download PDF
31. Rapid and accurate peripheral nerve imaging by multipoint Raman spectroscopy.
- Author
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Kumamoto Y, Harada Y, Tanaka H, and Takamatsu T
- Subjects
- Animals, Connective Tissue diagnostic imaging, Male, Rats, Rats, Wistar, Sensitivity and Specificity, Optical Imaging methods, Peripheral Nerves diagnostic imaging, Spectrum Analysis, Raman methods
- Abstract
Raman spectroscopy allows label-free, minimally invasive, and accurate detection of peripheral nerves. However, the conventional Raman imaging technique is time-consuming when measuring a large area of a sample. Establishing a method for rapidly acquiring spatial distribution of a bundle of peripheral nerve fibers is an essential step for Raman spectroscopy towards application in clinical surgery. Here we present a multipoint Raman spectroscopic technique for rapid peripheral nerve imaging. In only 5 seconds, spectra at 32 points situated on ex vivo rat peripheral nerve bundles and adjoining connective tissues were acquired. Principal component regression and discriminant analysis of spectra revealed that the sensitivity, specificity and accuracy for nerve detection were 85.8%, 96.0%, and 90.8%, respectively. Of 158 peripheral nerves, 152 (96.2%) showed ratio of the number of nerve-positive prediction points to the total measurement points being 0.4 or larger, whereas 119 (99.2%) connective tissues among 120 showed ratio smaller than 0.4. Based on the ratio and a bright-field image of the sample, accurate visualization of peripheral nerves was implemented. The results indicated that the multipoint Raman spectroscopic technique is capable of rapid and accurate peripheral nerve imaging.
- Published
- 2017
- Full Text
- View/download PDF
32. Label-free detection of myocardial ischaemia in the perfused rat heart by spontaneous Raman spectroscopy.
- Author
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Ohira S, Tanaka H, Harada Y, Minamikawa T, Kumamoto Y, Matoba S, Yaku H, and Takamatsu T
- Subjects
- Animals, Ischemic Preconditioning, Myocardial, Membrane Potential, Mitochondrial, Mitochondria metabolism, Myocardial Ischemia physiopathology, Myocardium metabolism, Myocardium pathology, Oxygen Consumption, Rats, Time-Lapse Imaging, Myocardial Ischemia diagnosis, Myocardial Ischemia metabolism, Spectrum Analysis, Raman methods
- Abstract
Raman spectroscopy, which identifies intrinsic molecular constituents, has a potential for determining myocardial viability under label-free conditions. However, its suitability for evaluating myocardial ischaemia is undetermined. Focusing on cytochromes, i.e., representative molecules reflecting mitochondrial activity, we tested whether Raman spectroscopy is applicable for evaluating myocardial ischaemia especially during early ischaemic phase. We obtained spontaneous Raman spectra of the subepicardial myocardium in the Langendorff-perfused rat heart upon 532-nm excitation before and during the "stopped-flow," global ischaemia. Semi-quantitative values of the peak intensities at 750 and 1127 cm
-1 , which reflect reduced cytochromes c and b, increased immediately and progressively after induction of the stopped flow, indicating progressive reduction of the mitochondrial respiration. Such spectral changes emerged before the loss of 1) mitochondrial membrane potentials measured by the fluorescence intensity of tetramethyl rhodamine ethyl ester or 2) staining of the triphenyl tetrazolium chloride dye in the myocardium. The progressive increases in the Raman peaks by stopped flow were significantly retarded by ischaemic preconditioning. Sequential measurements of the peak intensities at 750 and 1127 cm-1 enabled early detection of the myocardial ischaemia based on the mitochondrial functions. These data suggest that Raman spectroscopy offers the potential to evaluate acute ischaemic heart under label-free conditions., Competing Interests: The authors declare no competing financial interests.- Published
- 2017
- Full Text
- View/download PDF
33. Simplified and optimized multispectral imaging for 5-ALA-based fluorescence diagnosis of malignant lesions.
- Author
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Minamikawa T, Matsuo H, Kato Y, Harada Y, Otsuji E, Yanagisawa A, Tanaka H, and Takamatsu T
- Subjects
- Aminolevulinic Acid administration & dosage, Biotransformation, Cell Line, Tumor, Collagen chemistry, Colorectal Neoplasms pathology, Colorectal Neoplasms surgery, Flavins chemistry, Fluorescent Dyes administration & dosage, Humans, Lymph Node Excision, Lymph Nodes pathology, Lymph Nodes surgery, Lymphatic Metastasis, Optical Imaging, Protoporphyrins metabolism, Signal-To-Noise Ratio, Software, Aminolevulinic Acid metabolism, Colorectal Neoplasms diagnostic imaging, Fluorescent Dyes metabolism, Image Processing, Computer-Assisted methods, Lymph Nodes diagnostic imaging, Protoporphyrins chemistry
- Abstract
5-aminolevulinic acid (5-ALA)-based fluorescence diagnosis is now clinically applied for accurate and ultrarapid diagnosis of malignant lesions such as lymph node metastasis during surgery. 5-ALA-based diagnosis evaluates fluorescence intensity of a fluorescent metabolite of 5-ALA, protoporphyrin IX (PPIX); however, the fluorescence of PPIX is often affected by autofluorescence of tissue chromophores, such as collagen and flavins. In this study, we demonstrated PPIX fluorescence estimation with autofluorescence elimination for 5-ALA-based fluorescence diagnosis of malignant lesions by simplified and optimized multispectral imaging. We computationally optimized observation wavelength regions for the estimation of PPIX fluorescence in terms of minimizing prediction error of PPIX fluorescence intensity in the presence of typical chromophores, collagen and flavins. By using the fluorescence intensities of the optimized wavelength regions, we verified quantitative detection of PPIX fluorescence by using chemical mixtures of PPIX, flavins, and collagen. Furthermore, we demonstrated detection capability by using metastatic and non-metastatic lymph nodes of colorectal cancer patients. These results suggest the potential and usefulness of the background-free estimation method of PPIX fluorescence for 5-ALA-based fluorescence diagnosis of malignant lesions, and we expect this method to be beneficial for intraoperative and rapid cancer diagnosis.
- Published
- 2016
- Full Text
- View/download PDF
34. Pt-free carbon-based fuel cell catalyst prepared from spherical polyimide for enhanced oxygen diffusion.
- Author
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Nabae Y, Nagata S, Hayakawa T, Niwa H, Harada Y, Oshima M, Isoda A, Matsunaga A, Tanaka K, and Aoki T
- Abstract
The development of a non-precious metal (NPM) fuel cell catalyst is extremely important to achieve globalization of polymer electrolyte fuel cells due to the cost and scarcity of platinum. Here, we report on a NPM cathode catalyst prepared by the pyrolysis of spherical polyimide nanoparticles that contain small amounts of Fe additive. 60 nm diameter Fe-containing polyimide nanoparticles were successfully synthesized by the precipitation polymerization of pyromellitic acid dianhydride and 1,3,5-tris(4-aminophenyl)benzene with Fe(acac)3 (acac = acetylacetonate) as an additive. The particles were subsequently carbonized by multistep pyrolysis to obtain the NPM catalyst while retaining the small particle size. The catalyst has good performance and promising durability for fuel cell applications. The fuel cell performance under a 0.2 MPa air atmosphere at 80 °C of 1.0 A cm(-2) at 0.46 V is especially remarkable and better than that previously reported.
- Published
- 2016
- Full Text
- View/download PDF
35. Synergistic effect of ATP for RuvA-RuvB-Holliday junction DNA complex formation.
- Author
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Iwasa T, Han YW, Hiramatsu R, Yokota H, Nakao K, Yokokawa R, Ono T, and Harada Y
- Subjects
- Bacterial Proteins genetics, DNA Helicases chemistry, Escherichia coli genetics, Escherichia coli Proteins chemistry, Models, Biological, Protein Binding, Protein Transport, Adenosine Triphosphatases metabolism, Bacterial Proteins metabolism, DNA Helicases metabolism, DNA, Bacterial metabolism, DNA, Cruciform metabolism, Escherichia coli metabolism, Escherichia coli Proteins metabolism
- Abstract
The Escherichia coli RuvB hexameric ring motor proteins, together with RuvAs, promote branch migration of Holliday junction DNA. Zero mode waveguides (ZMWs) constitute of nanosized holes and enable the visualization of a single fluorescent molecule under micromolar order of the molecules, which is applicable to characterize the formation of RuvA-RuvB-Holliday junction DNA complex. In this study, we used ZMWs and counted the number of RuvBs binding to RuvA-Holliday junction DNA complex. Our data demonstrated that different nucleotide analogs increased the amount of Cy5-RuvBs binding to RuvA-Holliday junction DNA complex in the following order: no nucleotide, ADP, ATPγS, and mixture of ADP and ATPγS. These results suggest that not only ATP binding to RuvB but also ATP hydrolysis by RuvB facilitates a stable RuvA-RuvB-Holliday junction DNA complex formation.
- Published
- 2015
- Full Text
- View/download PDF
36. Ex vivo peripheral nerve detection of rats by spontaneous Raman spectroscopy.
- Author
-
Minamikawa T, Harada Y, and Takamatsu T
- Subjects
- Adipose Tissue chemistry, Adipose Tissue pathology, Animals, Discriminant Analysis, Male, Muscle, Skeletal chemistry, Muscle, Skeletal pathology, Nerve Fibers, Myelinated chemistry, Nerve Fibers, Myelinated pathology, Peripheral Nerves pathology, Principal Component Analysis, Rats, Rats, Wistar, Peripheral Nerves chemistry, Spectrum Analysis, Raman
- Abstract
Nerve-sparing surgery is increasingly being applied to avoid functional deficits of the limbs and organs following surgery. Peripheral nerves that should be preserved are, however, sometimes misidentified due to similarity of shape and color to non-nerve tissues. To avoid misidentification of peripheral nerves, development of an in situ nerve detection method is desired. In this study, we report the label-free detection of ex vivo peripheral nerves of Wistar rats by using Raman spectroscopy. We obtained Raman spectra of peripheral nerves (myelinated and unmyelinated nerves) and their adjacent tissues of Wistar rats without any treatment such as fixation and/or staining. For the identification of tissue species and further analysis of spectral features, we proposed a principal component regression-based discriminant analysis with representative Raman spectra of peripheral nerves and their adjacent tissues. Our prediction model selectively detected myelinated nerves and unmyelinated nerves of Wistar rats with respective sensitivities of 95.5% and 88.3% and specificities of 99.4% and 93.5%. Furthermore, important spectral features for the identification of tissue species were revealed by detailed analysis of principal components of representative Raman spectra of tissues. Our proposed approach may provide a unique and powerful tool for peripheral nerve detection for nerve-sparing surgery in the future.
- Published
- 2015
- Full Text
- View/download PDF
37. Interaction of Cx43 with Hsc70 regulates G1/S transition through CDK inhibitor p27.
- Author
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Hino H, Dai P, Yoshida T, Hatakeyama T, Harada Y, Otsuji E, Okuda T, and Takamatsu T
- Subjects
- Cell Nucleus metabolism, Cell Proliferation, Cyclin D1 metabolism, Cyclin-Dependent Kinase 4 metabolism, Humans, Multiprotein Complexes metabolism, Protein Binding, Protein Transport, Up-Regulation, Connexin 43 metabolism, Cyclin-Dependent Kinase Inhibitor p27 metabolism, G1 Phase, HSC70 Heat-Shock Proteins metabolism, S Phase
- Abstract
Connexin 43 (Cx43) functions as a cell growth suppressor. We have demonstrated that Cx43 interacts with heat shock cognate protein 70 (Hsc70) for regulating cell proliferation. Hsc70 interacts with CDK inhibitor p27, which regulates the assembly and subcellular localization of cyclin D1-CDK4-p27 complex. However, the involvement of p27 with Cx43-mediated cell cycle suppression is still poorly understood. Here, we report that nuclear accumulation of p27 is reduced by overexpression of Cx43, and that this reduction is restored by co-overexpression with Hsc70. We found that Cx43 competes with p27 for binding to Hsc70, and as a result, decreases the level of Hsc70 in cyclin D1-CDK4-p27 complex, leading to prevention of the nuclear translocation of the complex and the G1/S transition. Collectively, our findings suggest that, in Cx43 up-regulation, which is most likely an emergency measure, Cx43-Hsc70 interaction regulates cell cycle G1/S progression through a novel mechanism by which Cx43-Hsc70 interaction prevents the nuclear accumulation of p27 through controlling the nuclear translocation of cyclin D1-CDK4-p27 complex.
- Published
- 2015
- Full Text
- View/download PDF
38. Combining TGF-β signal inhibition and connexin43 silencing for iPSC induction from mouse cardiomyocytes.
- Author
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Dai P, Harada Y, Miyachi H, Tanaka H, Kitano S, Adachi T, Suzuki T, Hino H, and Takamatsu T
- Subjects
- Animals, Cell Differentiation physiology, Cellular Reprogramming physiology, Female, Genetic Vectors metabolism, Kruppel-Like Factor 4, Kruppel-Like Transcription Factors metabolism, Mice, Mice, Inbred C57BL, Mice, Inbred ICR, Octamer Transcription Factor-3 metabolism, Proto-Oncogene Proteins c-myc metabolism, SOXB1 Transcription Factors metabolism, Transcription Factors metabolism, Connexin 43 metabolism, Gene Silencing physiology, Induced Pluripotent Stem Cells metabolism, Induced Pluripotent Stem Cells physiology, Myocytes, Cardiac metabolism, Myocytes, Cardiac physiology, Transforming Growth Factor beta metabolism
- Abstract
The reprogramming of differentiated cells into induced pluripotent stem cells (iPSCs) can be achieved by ectopic expression of defined transcription factors (Oct3/4, Sox2, Klf4 and c-Myc). However, to date, some iPSCs have been generated using viral vectors; thus, unexpected insertional mutagenesis in the target cells would be a potential risk. Here we report reprogramming of siPSCs (gene silencing-induced pluripotent stem cells) from mouse neonatal cardiomyocytes (CMs) by combining TGF-β signal inhibition and connexin43 (Cx43) silencing, and show that siPSCs show pluripotency in vitro and in vivo. Our novel non-insertional mutagenesis technique may provide a means for iPSC generation.
- Published
- 2014
- Full Text
- View/download PDF
39. Identification of a mammalian vesicular polyamine transporter.
- Author
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Hiasa M, Miyaji T, Haruna Y, Takeuchi T, Harada Y, Moriyama S, Yamamoto A, Omote H, and Moriyama Y
- Subjects
- Animals, Astrocytes metabolism, Biological Transport, Brain metabolism, Gene Expression, Gene Expression Profiling, Gene Knockdown Techniques, Humans, Mammals, Mice, Organ Specificity genetics, Protein Transport, Rats, Vesicular Biogenic Amine Transport Proteins antagonists & inhibitors, Vesicular Monoamine Transport Proteins antagonists & inhibitors, Vesicular Monoamine Transport Proteins genetics, Vesicular Monoamine Transport Proteins metabolism, Polyamines metabolism, Vesicular Biogenic Amine Transport Proteins genetics, Vesicular Biogenic Amine Transport Proteins metabolism
- Abstract
Spermine and spermidine act as neuromodulators upon binding to the extracellular site(s) of various ionotropic receptors, such as N-methyl-d-aspartate receptors. To gain access to the receptors, polyamines synthesized in neurons and astrocytes are stored in secretory vesicles and released upon depolarization. Although vesicular storage is mediated in an ATP-dependent, reserpine-sensitive fashion, the transporter responsible for this process remains unknown. SLC18B1 is the fourth member of the SLC18 transporter family, which includes vesicular monoamine transporters and vesicular acetylcholine transporter. Proteoliposomes containing purified human SLC18B1 protein actively transport spermine and spermidine by exchange of H(+). SLC18B1 protein is predominantly expressed in the hippocampus and is associated with vesicles in astrocytes. SLC18B1 gene knockdown decreased both SLC18B1 protein and spermine/spermidine contents in astrocytes. These results indicated that SLC18B1 encodes a vesicular polyamine transporter (VPAT).
- Published
- 2014
- Full Text
- View/download PDF
40. Real-time single-cell imaging of protein secretion.
- Author
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Shirasaki Y, Yamagishi M, Suzuki N, Izawa K, Nakahara A, Mizuno J, Shoji S, Heike T, Harada Y, Nishikomori R, and Ohara O
- Subjects
- Cell Membrane metabolism, Cells, Cultured, Fluoroimmunoassay, Humans, Interleukin-1beta metabolism, Interleukin-6 metabolism, Microscopy, Fluorescence, Monocytes metabolism, Molecular Imaging methods, Protein Transport, Single-Cell Analysis methods
- Abstract
Protein secretion, a key intercellular event for transducing cellular signals, is thought to be strictly regulated. However, secretion dynamics at the single-cell level have not yet been clarified because intercellular heterogeneity results in an averaging response from the bulk cell population. To address this issue, we developed a novel assay platform for real-time imaging of protein secretion at single-cell resolution by a sandwich immunoassay monitored by total internal reflection microscopy in sub-nanolitre-sized microwell arrays. Real-time secretion imaging on the platform at 1-min time intervals allowed successful detection of the heterogeneous onset time of nonclassical IL-1β secretion from monocytes after external stimulation. The platform also helped in elucidating the chronological relationship between loss of membrane integrity and IL-1β secretion. The study results indicate that this unique monitoring platform will serve as a new and powerful tool for analysing protein secretion dynamics with simultaneous monitoring of intracellular events by live-cell imaging.
- Published
- 2014
- Full Text
- View/download PDF
41. Connexin43 functions as a novel interacting partner of heat shock cognate protein 70.
- Author
-
Hatakeyama T, Dai P, Harada Y, Hino H, Tsukahara F, Maru Y, Otsuji E, and Takamatsu T
- Subjects
- Binding, Competitive, Cell Line, Cell Nucleus metabolism, Connexin 43 chemistry, Cyclin D1 metabolism, Cyclin-Dependent Kinase Inhibitor p27 metabolism, G1 Phase, HSC70 Heat-Shock Proteins chemistry, Humans, Protein Binding, Protein Interaction Domains and Motifs, Protein Transport, Proteolysis, S Phase, S-Phase Kinase-Associated Proteins metabolism, Connexin 43 metabolism, HSC70 Heat-Shock Proteins metabolism
- Abstract
Regulation of connexin43 (Cx43) expression affects cell proliferation, differentiation and apoptosis in a gap junctional intercellular communication (GJIC)-independent manner. However, the underlying mechanisms of Cx43-mediated cell cycle suppression are still poorly understood. To elucidate the molecular mechanism of Cx43-mediated cell cycle suppression, we searched for Cx43 interacting proteins by using a proteomics approach. Here, we have identified a Cx43-interacting protein, heat shock cognate protein 70 (Hsc70). We confirmed that Hsc70 directly binds to the C-terminus of Cx43, whereas Hsc54, a splice variant of Hsc70, does not, that Cx43 competes with cyclin D1 for binding to Hsc70, and that the nuclear accumulation of cyclin D1 is reduced by overexpression of Cx43 in a GJIC-independent manner, which is restored by co-overexpression with Hsc70. As a result, the cell proliferation is regulated by Cx43. Our results suggest that Cx43-Hsc70 interaction probably plays a critical role during G1/S progression.
- Published
- 2013
- Full Text
- View/download PDF
42. β-catenin is a molecular switch that regulates transition of cell-cell adhesion to fusion.
- Author
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Takezawa Y, Yoshida K, Miyado K, Sato M, Nakamura A, Kawano N, Sakakibara K, Kondo T, Harada Y, Ohnami N, Kanai S, Miyado M, Saito H, Takahashi Y, Akutsu H, and Umezawa A
- Subjects
- Animals, Base Sequence, Cadherins metabolism, DNA Primers, Female, Male, Mice, Mice, Inbred C57BL, Polymerase Chain Reaction, Sperm-Ovum Interactions, beta Catenin metabolism, Cell Adhesion physiology, Cell Fusion, beta Catenin physiology
- Abstract
When a sperm and an oocyte unite upon fertilization, their cell membranes adhere and fuse, but little is known about the factors regulating sperm-oocyte adhesion. Here we explored the role of β-catenin in sperm-oocyte adhesion. Biochemical analysis revealed that E-cadherin and β-catenin formed a complex in oocytes and also in sperm. Sperm-oocyte adhesion was impaired when β-catenin-deficient oocytes were inseminated with sperm. Furthermore, expression of β-catenin decreased from the sperm head and the site of an oocyte to which a sperm adheres after completion of sperm-oocyte adhesion. UBE1-41, an inhibitor of ubiquitin-activating enzyme 1, inhibited the degradation of β-catenin, and reduced the fusing ability of wild-type (but not β-catenin-deficient) oocytes. These results indicate that β-catenin is not only involved in membrane adhesion, but also in the transition to membrane fusion upon fertilization.
- Published
- 2011
- Full Text
- View/download PDF
43. Cytokine-based high log-scale expansion of functional human dendritic cells from cord-blood CD34-positive cells.
- Author
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Harada Y, Okada-Nakanishi Y, Ueda Y, Tsujitani S, Saito S, Fuji-Ogawa T, Iida A, Hasegawa M, Ichikawa T, and Yonemitsu Y
- Subjects
- CD11c Antigen metabolism, Cadherins metabolism, Cell Proliferation, Cells, Cultured, Fetal Blood cytology, Flow Cytometry, Humans, Immunotherapy, T-Lymphocytes metabolism, Antigens, CD34 metabolism, Cell Culture Techniques, Cytokines metabolism, Dendritic Cells cytology, Gene Expression Regulation
- Abstract
Dendritic cells (DCs) play a crucial role in maintaining the immune system. Though DC-based cancer immunotherapy has been suggested as a potential treatment for various kinds of malignancies, its clinical efficacies are still insufficient in many human trials. Issues that limit the clinical efficacy of DC-based immunotherapy, as well as the difficulty of the industrial production of DCs, are largely due to the limited number of autologous DCs available from each patient. We here established a possible breakthrough, a simple cytokine-based culture method to expand the log-scale order of functional human DCs. Floating cultivation of cord-blood CD34(+) cells under an optimized cytokine cocktail led these progenitor cells to stable log-scale proliferation and to DC differentiation. The expanded DCs had typical features of conventional myeloid DCs in vitro. Therefore, the concept of DC expansion should contribute significantly to the progress of DC immunotherapy.
- Published
- 2011
- Full Text
- View/download PDF
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