15 results on '"Ashley, D."'
Search Results
2. Longitudinal changes in brain metabolites following pediatric concussion
- Author
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Parker L. La, Robyn Walker, Tiffany K. Bell, William Craig, Quynh Doan, Miriam H. Beauchamp, Roger Zemek, Keith Owen Yeates, Ashley D. Harris, and Pediatric Emergency Research Canada A-CAP study team
- Subjects
Medicine ,Science - Abstract
Abstract Concussion is commonly characterized by a cascade of neurometabolic changes following injury. Magnetic Resonance Spectroscopy (MRS) can be used to quantify neurometabolites non-invasively. Longitudinal changes in neurometabolites have rarely been studied in pediatric concussion, and fewer studies consider symptoms. This study examines longitudinal changes of neurometabolites in pediatric concussion and associations between neurometabolites and symptom burden. Participants who presented with concussion or orthopedic injury (OI, comparison group) were recruited. The first timepoint for MRS data collection was at a mean of 12 days post-injury (n = 545). Participants were then randomized to 3 (n = 243) or 6 (n = 215) months for MRS follow-up. Parents completed symptom questionnaires to quantify somatic and cognitive symptoms at multiple timepoints following injury. There were no significant changes in neurometabolites over time in the concussion group and neurometabolite trajectories did not differ between asymptomatic concussion, symptomatic concussion, and OI groups. Cross-sectionally, Choline was significantly lower in those with persistent somatic symptoms compared to OI controls at 3 months post-injury. Lower Choline was also significantly associated with higher somatic symptoms. Although overall neurometabolites do not change over time, choline differences that appear at 3 months and is related to somatic symptoms.
- Published
- 2024
- Full Text
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3. Consistency of frontal cortex metabolites quantified by magnetic resonance spectroscopy within overlapping small and large voxels
- Author
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DeMayo, Marilena M., McGirr, Alexander, Selby, Ben, MacMaster, Frank P., Debert, Chantel T., and Harris, Ashley D.
- Published
- 2023
- Full Text
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4. Consistency of frontal cortex metabolites quantified by magnetic resonance spectroscopy within overlapping small and large voxels
- Author
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Marilena M. DeMayo, Alexander McGirr, Ben Selby, Frank P. MacMaster, Chantel T. Debert, and Ashley D. Harris
- Subjects
Medicine ,Science - Abstract
Abstract Single voxel magnetic resonance spectroscopy (MRS) quantifies metabolites within a specified volume of interest. MRS voxels are constrained to rectangular prism shapes. Therefore, they must define a small voxel contained within the anatomy of interest or include not of interest neighbouring tissue. When studying cortical regions without clearly demarcated boundaries, e.g. the dorsolateral prefrontal cortex (DLPFC), it is unclear how representative a larger voxel is of a smaller volume within it. To determine if a large voxel is representative of a small voxel placed within it, this study quantified total N-Acetylaspartate (tNAA), choline, glutamate, Glx (glutamate and glutamine combined), myo-inositol, and creatine in two overlapping MRS voxels in the DLPFC, a large (30×30x30 mm) and small (15×15x15 mm) voxel. Signal-to-noise ratio (SNR) and tissue type factors were specifically investigated. With water-referencing, only myo-inositol was significantly correlated between the two voxels, while all metabolites showed significant correlations with creatine-referencing. SNR had a minimal effect on the correspondence between voxels, while tissue type showed substantial influence. This study demonstrates substantial variability of metabolite estimates within the DLPFC. It suggests that when small anatomical structures are of interest, it may be valuable to spend additional acquisition time to obtain specific, localized data.
- Published
- 2023
- Full Text
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5. Delirium severity does not differ between medical and surgical intensive care units after adjusting for medication use
- Author
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Damaris Ortiz, Heidi L. Lindroth, Tyler Braly, Anthony J. Perkins, Sanjay Mohanty, Ashley D. Meagher, Sikandar H. Khan, Malaz A. Boustani, and Babar A. Khan
- Subjects
Medicine ,Science - Abstract
Abstract Severe delirium is associated with an increased risk of mortality, institutionalization, and length of stay. Few studies have examined differences in delirium severity between different populations of critically ill patients. The objective of the study was to compare delirium severity and the presence of the four core features between adults in the surgical intensive care unit (SICU) and medical intensive care unit (MICU) while controlling for variables known to be associated with delirium. This is a secondary analysis of two parallel randomized multi-center trials conducted from March 2009 to January 2015 at 3 Indianapolis hospitals. A total of 474 adults with delirium were included in the analysis. Subjects were randomized in a 1:1 ratio in random blocks of 4 by a computer program. Patients were randomized to either haloperidol prescribing or de-prescribing regimen vs usual care. Delirium severity was assessed daily or twice-daily using the CAM-ICU-7 beginning after 24 h of ICU admission and until discharge from the hospital, death, or 30 days after enrollment. Secondary outcomes included hospital length of stay, hospital and 30-day mortality, and delirium-related adverse events. These outcomes were compared between SICU and MICU settings for this secondary analysis. Out of 474 patients, 237 were randomized to intervention. At study enrollment, the overall cohort had a mean age of 59 (SD 16) years old, was 54% female, 44% African-American, and 81% were mechanically ventilated upon enrollment. MICU participants were significantly older and severely ill with a higher premorbid cognitive and physical dysfunction burden. In univariate analysis, SICU participants had significantly higher mean total CAM-ICU-7 scores, corresponding to delirium severity, (4.15 (2.20) vs 3.60 (2.32), p = 0.02), and a lower mean RASS score (− 1.79 (1.28) vs − 1.53 (1.27), p
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- 2022
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6. Delirium severity does not differ between medical and surgical intensive care units after adjusting for medication use
- Author
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Ortiz, Damaris, Lindroth, Heidi L., Braly, Tyler, Perkins, Anthony J., Mohanty, Sanjay, Meagher, Ashley D., Khan, Sikandar H., Boustani, Malaz A., and Khan, Babar A.
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- 2022
- Full Text
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7. A model species for agricultural pest genomics: the genome of the Colorado potato beetle, Leptinotarsa decemlineata (Coleoptera: Chrysomelidae).
- Author
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Schoville, Sean D, Chen, Yolanda H, Andersson, Martin N, Benoit, Joshua B, Bhandari, Anita, Bowsher, Julia H, Brevik, Kristian, Cappelle, Kaat, Chen, Mei-Ju M, Childers, Anna K, Childers, Christopher, Christiaens, Olivier, Clements, Justin, Didion, Elise M, Elpidina, Elena N, Engsontia, Patamarerk, Friedrich, Markus, García-Robles, Inmaculada, Gibbs, Richard A, Goswami, Chandan, Grapputo, Alessandro, Gruden, Kristina, Grynberg, Marcin, Henrissat, Bernard, Jennings, Emily C, Jones, Jeffery W, Kalsi, Megha, Khan, Sher A, Kumar, Abhishek, Li, Fei, Lombard, Vincent, Ma, Xingzhou, Martynov, Alexander, Miller, Nicholas J, Mitchell, Robert F, Munoz-Torres, Monica, Muszewska, Anna, Oppert, Brenda, Palli, Subba Reddy, Panfilio, Kristen A, Pauchet, Yannick, Perkin, Lindsey C, Petek, Marko, Poelchau, Monica F, Record, Éric, Rinehart, Joseph P, Robertson, Hugh M, Rosendale, Andrew J, Ruiz-Arroyo, Victor M, Smagghe, Guy, Szendrei, Zsofia, Thomas, Gregg WC, Torson, Alex S, Vargas Jentzsch, Iris M, Weirauch, Matthew T, Yates, Ashley D, Yocum, George D, Yoon, June-Sun, and Richards, Stephen
- Subjects
Animals ,Insect Proteins ,Transcription Factors ,DNA Transposable Elements ,Genetics ,Population ,Genomics ,Pest Control ,Biological ,Evolution ,Molecular ,Phylogeny ,Gene Expression Regulation ,RNA Interference ,Insecticide Resistance ,Multigene Family ,Agriculture ,Female ,Male ,Solanum tuberosum ,Genome ,Insect ,Host-Parasite Interactions ,Genetic Variation ,Molecular Sequence Annotation ,Coleoptera ,Genetics ,Population ,Pest Control ,Biological ,Evolution ,Molecular ,Genome ,Insect ,Biochemistry and Cell Biology ,Other Physical Sciences - Abstract
The Colorado potato beetle is one of the most challenging agricultural pests to manage. It has shown a spectacular ability to adapt to a variety of solanaceaeous plants and variable climates during its global invasion, and, notably, to rapidly evolve insecticide resistance. To examine evidence of rapid evolutionary change, and to understand the genetic basis of herbivory and insecticide resistance, we tested for structural and functional genomic changes relative to other arthropod species using genome sequencing, transcriptomics, and community annotation. Two factors that might facilitate rapid evolutionary change include transposable elements, which comprise at least 17% of the genome and are rapidly evolving compared to other Coleoptera, and high levels of nucleotide diversity in rapidly growing pest populations. Adaptations to plant feeding are evident in gene expansions and differential expression of digestive enzymes in gut tissues, as well as expansions of gustatory receptors for bitter tasting. Surprisingly, the suite of genes involved in insecticide resistance is similar to other beetles. Finally, duplications in the RNAi pathway might explain why Leptinotarsa decemlineata has high sensitivity to dsRNA. The L. decemlineata genome provides opportunities to investigate a broad range of phenotypes and to develop sustainable methods to control this widely successful pest.
- Published
- 2018
8. Macromolecule suppressed GABA levels show no relationship with age in a pediatric sample
- Author
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Tiffany Bell, Mehak Stokoe, and Ashley D. Harris
- Subjects
Medicine ,Science - Abstract
Abstract The inhibitory neurotransmitter γ-Aminobutyric acid (GABA) plays a crucial role in cortical development. Therefore, characterizing changes in GABA levels during development has important implications for the study of healthy development and developmental disorders. Brain GABA levels can be measured non-invasively using GABA-edited magnetic resonance spectroscopy (MRS). However, the most commonly used editing technique to measure GABA results in contamination of the GABA signal with macromolecules (MM). Therefore, GABA measured using this technique is often referred to as GABA+ . While few in number, previous studies have shown GABA+ levels increase with age during development. However, these studies are unable to specify whether it is specifically GABA that is increasing or, instead, if levels of MM increase. In this study, we use a GABA-editing technique specifically designed to suppress the MM signal (MM-supp GABA). We find no relationship between MM-supp GABA and age in healthy children aged 7–14 years. These findings suggest that the relationship between GABA+ and age is driven by changes in MM levels, not by changes in GABA levels. Moreover, these findings highlight the importance of accounting for MM levels in MRS quantification.
- Published
- 2021
- Full Text
- View/download PDF
9. The biomarker HE4 (WFDC2) promotes a pro-angiogenic and immunosuppressive tumor microenvironment via regulation of STAT3 target genes
- Author
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Nicole E. James, Jenna B. Emerson, Ashley D. Borgstadt, Lindsey Beffa, Matthew T. Oliver, Virginia Hovanesian, Anze Urh, Rakesh K. Singh, Rachael Rowswell-Turner, Paul A. DiSilvestro, Joyce Ou, Richard G. Moore, and Jennifer R. Ribeiro
- Subjects
Medicine ,Science - Abstract
Abstract Epithelial ovarian cancer (EOC) is a highly lethal gynecologic malignancy arising from the fallopian tubes that has a high rate of chemoresistant recurrence and low five-year survival rate. The ovarian cancer biomarker HE4 is known to promote proliferation, metastasis, chemoresistance, and suppression of cytotoxic lymphocytes. In this study, we sought to examine the effects of HE4 on signaling within diverse cell types that compose the tumor microenvironment. HE4 was found to activate STAT3 signaling and promote upregulation of the pro-angiogenic STAT3 target genes IL8 and HIF1A in immune cells, ovarian cancer cells, and endothelial cells. Moreover, HE4 promoted increases in tube formation in an in vitro model of angiogenesis, which was also dependent upon STAT3 signaling. Clinically, HE4 and IL8 levels positively correlated in ovarian cancer patient tissue. Furthermore, HE4 serum levels correlated with microvascular density in EOC tissue and inversely correlated with cytotoxic T cell infiltration, suggesting that HE4 may cause deregulated blood vessel formation and suppress proper T cell trafficking in tumors. Collectively, this study shows for the first time that HE4 has the ability to affect signaling events and gene expression in multiple cell types of the tumor microenvironment, which could contribute to angiogenesis and altered immunogenic responses in ovarian cancer.
- Published
- 2020
- Full Text
- View/download PDF
10. Macromolecule suppressed GABA levels show no relationship with age in a pediatric sample
- Author
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Bell, Tiffany, Stokoe, Mehak, and Harris, Ashley D.
- Published
- 2021
- Full Text
- View/download PDF
11. The biomarker HE4 (WFDC2) promotes a pro-angiogenic and immunosuppressive tumor microenvironment via regulation of STAT3 target genes
- Author
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James, Nicole E., Emerson, Jenna B., Borgstadt, Ashley D., Beffa, Lindsey, Oliver, Matthew T., Hovanesian, Virginia, Urh, Anze, Singh, Rakesh K., Rowswell-Turner, Rachael, DiSilvestro, Paul A., Ou, Joyce, Moore, Richard G., and Ribeiro, Jennifer R.
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- 2020
- Full Text
- View/download PDF
12. Macromolecule suppressed GABA levels show no relationship with age in a pediatric sample
- Author
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Ashley D. Harris, Mehak Stokoe, and Tiffany Bell
- Subjects
Male ,medicine.medical_specialty ,Magnetic Resonance Spectroscopy ,Adolescent ,Macromolecular Substances ,Science ,Article ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,medicine ,Humans ,Child ,gamma-Aminobutyric Acid ,Multidisciplinary ,Chemistry ,Age Factors ,Brain ,Neurochemistry ,Development of the nervous system ,Inhibitory neurotransmitter ,Magnetic Resonance Imaging ,Endocrinology ,nervous system ,Medicine ,Female ,030217 neurology & neurosurgery ,Algorithms ,Neuroscience - Abstract
The inhibitory neurotransmitter γ-Aminobutyric acid (GABA) plays a crucial role in cortical development. Therefore, characterizing changes in GABA levels during development has important implications for the study of healthy development and developmental disorders. Brain GABA levels can be measured non-invasively using GABA-edited magnetic resonance spectroscopy (MRS). However, the most commonly used editing technique to measure GABA results in contamination of the GABA signal with macromolecules (MM). Therefore, GABA measured using this technique is often referred to as GABA+ . While few in number, previous studies have shown GABA+ levels increase with age during development. However, these studies are unable to specify whether it is specifically GABA that is increasing or, instead, if levels of MM increase. In this study, we use a GABA-editing technique specifically designed to suppress the MM signal (MM-supp GABA). We find no relationship between MM-supp GABA and age in healthy children aged 7–14 years. These findings suggest that the relationship between GABA+ and age is driven by changes in MM levels, not by changes in GABA levels. Moreover, these findings highlight the importance of accounting for MM levels in MRS quantification.
- Published
- 2021
13. The biomarker HE4 (WFDC2) promotes a pro-angiogenic and immunosuppressive tumor microenvironment via regulation of STAT3 target genes
- Author
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Rachael B. Rowswell-Turner, Lindsey Beffa, Ashley D. Borgstadt, Jenna B. Emerson, Richard G. Moore, Jennifer R. Ribeiro, Virginia Hovanesian, Joyce J. Ou, Anze Urh, Paul DiSilvestro, Nicole E. James, Rakesh K. Singh, and Matthew T. Oliver
- Subjects
Adult ,STAT3 Transcription Factor ,Cancer microenvironment ,Angiogenesis ,T cell ,Science ,Article ,Metastasis ,WAP Four-Disulfide Core Domain Protein 2 ,Cell Movement ,Ovarian cancer ,medicine ,Biomarkers, Tumor ,Tumor Cells, Cultured ,Tumor Microenvironment ,Cytotoxic T cell ,Humans ,Cell Proliferation ,Tube formation ,Ovarian Neoplasms ,Tumor microenvironment ,Multidisciplinary ,Neovascularization, Pathologic ,business.industry ,Middle Aged ,medicine.disease ,Prognosis ,Gene Expression Regulation, Neoplastic ,medicine.anatomical_structure ,HIF1A ,Case-Control Studies ,Cancer research ,Medicine ,Female ,business ,Tumour angiogenesis ,Follow-Up Studies - Abstract
Epithelial ovarian cancer (EOC) is a highly lethal gynecologic malignancy arising from the fallopian tubes that has a high rate of chemoresistant recurrence and low five-year survival rate. The ovarian cancer biomarker HE4 is known to promote proliferation, metastasis, chemoresistance, and suppression of cytotoxic lymphocytes. In this study, we sought to examine the effects of HE4 on signaling within diverse cell types that compose the tumor microenvironment. HE4 was found to activate STAT3 signaling and promote upregulation of the pro-angiogenic STAT3 target genes IL8 and HIF1A in immune cells, ovarian cancer cells, and endothelial cells. Moreover, HE4 promoted increases in tube formation in an in vitro model of angiogenesis, which was also dependent upon STAT3 signaling. Clinically, HE4 and IL8 levels positively correlated in ovarian cancer patient tissue. Furthermore, HE4 serum levels correlated with microvascular density in EOC tissue and inversely correlated with cytotoxic T cell infiltration, suggesting that HE4 may cause deregulated blood vessel formation and suppress proper T cell trafficking in tumors. Collectively, this study shows for the first time that HE4 has the ability to affect signaling events and gene expression in multiple cell types of the tumor microenvironment, which could contribute to angiogenesis and altered immunogenic responses in ovarian cancer.
- Published
- 2019
14. Growth Associated Protein 43 (GAP-43) as a Novel Target for the Diagnosis, Treatment and Prevention of Epileptogenesis
- Author
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Ashley D. Nemes, Qi-Gang Zhou, Zhong Ying, Katayoun Ayasoufi, Hoonkyo Suh, and Imad Najm
- Subjects
Male ,0301 basic medicine ,medicine.medical_specialty ,lcsh:Medicine ,Epileptogenesis ,Article ,Rats, Sprague-Dawley ,Small hairpin RNA ,03 medical and health sciences ,Epilepsy ,GAP-43 Protein ,0302 clinical medicine ,Text mining ,Seizures ,Internal medicine ,medicine ,Animals ,Ictal ,Gap-43 protein ,lcsh:Science ,Multidisciplinary ,biology ,business.industry ,lcsh:R ,Electroencephalography ,Cortical dysplasia ,medicine.disease ,Rats ,Malformations of Cortical Development ,Disease Models, Animal ,030104 developmental biology ,Endocrinology ,Gene Expression Regulation ,Excitatory postsynaptic potential ,biology.protein ,lcsh:Q ,business ,Biomarkers ,030217 neurology & neurosurgery - Abstract
We previously showed increased growth associated protein 43 (GAP-43) expression in brain samples resected from patients with cortical dysplasia (CD), which was correlated with duration of epilepsy. Here, we used a rat model of CD to examine the regulation of GAP-43 in the brain and serum over the course of epileptogenesis. Baseline GAP-43 expression was higher in CD animals compared to control non-CD rats. An acute seizure increased GAP-43 expression in both CD and control rats. However, GAP-43 expression decreased by day 15 post-seizure in control rats, which did not develop spontaneous seizures. In contrast, GAP-43 remained up-regulated in CD rats, and over 50% developed chronic epilepsy with increased GAP-43 levels in their serum. GAP-43 protein was primarily located in excitatory neurons, suggesting its functional significance in epileptogenesis. Inhibition of GAP-43 expression by shRNA significantly reduced seizure duration and severity in CD rats after acute seizures with subsequent reduction in interictal spiking. Serum GAP-43 levels were significantly higher in CD rats that developed spontaneous seizures. Together, these results suggest GAP-43 as a key factor promoting epileptogenesis, a possible therapeutic target for treatment of progressive epilepsy and a potential biomarker for epilepsy progression in CD.
- Published
- 2017
15. Growth Associated Protein 43 (GAP-43) as a Novel Target for the Diagnosis, Treatment and Prevention of Epileptogenesis
- Author
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Nemes, Ashley D., primary, Ayasoufi, Katayoun, additional, Ying, Zhong, additional, Zhou, Qi-Gang, additional, Suh, Hoonkyo, additional, and Najm, Imad M., additional
- Published
- 2017
- Full Text
- View/download PDF
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