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Autotrophic picoplankton (0.2–2 μm) can be a significant contributor to primary production and hence play an important role in carbon flow. The phytoplankton community structure in the Baltic Sea is very region specific and the understanding of the composition and dynamics of pico-size phytoplankton is generally poor. The main objective of this study was to determine the contribution of picoeukaryotic algae and their taxonomic com- position in late summer phytoplankton community of the West-Estonian Archipelago Sea. We found that about 20% of total chlorophyll a (Chl a) in this area belongs to autotrophic picoplankton. With increasing total Chl a, the Chl a of autotrophic picoplankton increased while its contribution in total Chl a decreased. Picoeukaryotes play an important role in the coastal area of the Baltic Sea where they constituted around 50% of the total autotrophic picoplankton biomass. The most abundant groups of picoeukaryotic algae were cryptophytes (16%), chlorophytes (13%) and diatoms (9%). Picocyanobacteria were clearly dominated by phycoerythrin containing Synechococcus. The parallel use of different assessment methods (CHEMTAX and flow cytometry) revealed the share of eukaryotic and prokaryotic part of autotrophic picoplankton. We gratefully thank Dr. Tiit Kutser (Estonian Marine Institute, Uni- versity of Tartu) for organizing the cruises and helping with the sample collection and Karolin Teeveer for providing microscopy counts. This work was supported by Estonian Ministry of Education and Research (IUT 21-02); Estonian Science Foundation (ETF9102, ETF8576); Swiss Grant for Programme “Enhancing public environmental monitoring ca- pacities” and Estonian Doctoral School of Earth Sciences and Ecology. We are thankful for the two reviewers who provided excellent advice to improve this manscript. We gratefully thank Dr. Tiit Kutser (Estonian Marine Institute, Uni- versity of Tartu) for organizing the cruises and helping with the sample collection and Karolin Teeveer for providing microscopy counts. This work was supported by Estonian Ministry of Education and Research (IUT 21-02); Estonian Science Foundation (ETF9102, ETF8576); Swiss Grant for Programme “Enhancing public environmental monitoring ca- pacities” and Estonian Doctoral School of Earth Sciences and Ecology. We are thankful for the two reviewers who provided excellent advice to improve this manscript.

Knowledge about dissolved oxygen (DO) and carbon dioxide (CO2) distribution in lakes has increased considerably over the last decades. However, studies about high resolution dynamics of dissolved CO2 in different types of lakes over daily or weekly time scales are still very scarce. We measured summertime vertical DO and CO2 profiles at sub-hourly intervals during one week in eight Estonian lakes representing different lake types according to European Water Framework Directive. The lakes showed considerable differences in thermal stratification and vertical distribution of dissolved oxygen and CO2 as well as different diurnal dynamics over the measurement period. We observed a continuous CO2 supersaturation in the upper mixed layer of the alkalitrophic (calcareous groundwater-fed) lake and the dark soft-water lake showing them as CO2 emitting "chimneys" although with different underlying mechanisms. In three lake types strong undersaturation with CO2 occurred in the surface layer characterising them as CO2 sinks for the measurement period while in another three types the surface layer CO2 was mostly in equilibrium with the atmosphere. Factor analysis showed that DO% in the surface layer and the strength of its relationship with CO2% were positively related to alkalinity and negatively to trophic state and DOC gradients, whereas deeper lakes were characterised by higher surface concentration but smaller spatial and temporal variability of CO2. Multiple regression analysis revealed lake area, maximum depth and the light attenuation coefficient as variables affecting the largest number of gas regime indicators. We conclude that the trophic status of lakes in combination with type specific features such as morphometry, alkalinity and colour (DOC) determines the distribution and dynamics of dissolved CO2 and DO, which therefore may indicate functional differences in carbon cycling among lakes.

We aimed at quantifying the importance of limnological variables in the decadal rise of cyanobacteria biomass in shallow hemiboreal lakes. We constructed estimates of cyanobacteria (blue-green algae) biomass in a large, eutrophic lake (Estonia, Northeastern Europe) from a database comprising 28 limnological variables and spanning more than 50 years of monitoring. Using a dual-model approach consisting in a boosted regression trees (BRT) followed by a generalized least squares (GLS) model, our results revealed that six variables were most influential for assessing the variance of cyanobacteria biomass. Cyanobacteria response to nitrate concentration and rotifer abundance was negative, whereas it was positive to pH, temperature, cladoceran and copepod biomass. Response to total phosphorus (TP) and total phosphorus to total nitrogen ratio was very weak, which suggests that actual in-lake TP concentration is still above limiting values. The most efficient GLS model, which explained nearly two thirds (r2 = 0.65) of the variance of cyanobacteria biomass included nitrate concentration, water temperature and pH. The very high number of observations (maximum n = 525) supports the robustness of the models. Our results suggest that the decadal rise of blue-green algae in shallow lakes lies in the interaction between cultural eutrophication and global warming which bring in-lake physical and chemical conditions closer to cyanobacteria optima. This research was supported by Start-Up Per- sonal Research Grant PUT 777 to FC and IUT 21-2 of the Estonian Ministry of Education and Research and by MARS project (Managing Aquatic ecosystems and water Resources under multiple Stress) funded under the EU 7th Framework Programme, Theme 6 (Environment including Climate Change), Contract No.: 603378 (http://www.mars- project.eu). This research was supported by Start-Up Per- sonal Research Grant PUT 777 to FC and IUT 21-2 of the Estonian Ministry of Education and Research and by MARS project (Managing Aquatic ecosystems and water Resources under multiple Stress) funded under the EU 7th Framework Programme, Theme 6 (Environment in- cluding Climate Change), Contract No.: 603378 (http://www.mars- project.eu).

Organic matter (OM) has numerous geochemical and ecological functions in inland waters and can affect water quality. Different parameters of aquatic OM are measured with various methods as no single analytical tool can provide definitive structural or functional information about it. In the present paper we review different OM met- rics used in the European Union (EU) lake surveillance monitoring programmes and assess their suitability to provide sufficient data about the brownification and enrichment with oxygen consuming substances in European lakes. In the EU Water Framework Directive (WFD), metrics of OM are not mandatory physico- chemical parameters, but only recommended parameters to characterize water transparency, oxygenation con- ditions or acidification status. Our analysis shows that, as lake OM is monitored under the WFD in only 14 coun- tries, no Europe-wide conclusions on the situation regarding brownification and organic enrichment can be drawn based on these data. Applied parameters in lake surveillance monitoring programmes are biochemical ox- ygen demand (BOD), chemical oxygen demand (COD), total organic carbon (TOC), dissolved organic carbon (DOC), water colour (WCol), and yellow substance. Different national OM metrics used avoid getting a broad pic- ture of lake OM concentration changes in Europe over the last decades. Furthermore, our results demonstrate that the possibilities to convert different OM parameters to each other are limited because empirical relationships between them are region-specific. OM sensors for continuous measurements and remote sensing surveys could improve the effectiveness of lake OM monitoring, especially its temporal and spatial representativeness. It would be highly suggested to include in lake monitoring programmes also methods (e.g. absorbance or fluorescence spectroscopy) allowing to characterize the composition of OM as it influences strongly the biogeochemical role of OM in lakes. This research was supported by Estonian Ministry of Education and Research through the institutional project IUT 21-2 and personal research grant PUT777, by the MARS project (Managing Aquatic ecosystems and water Resources under multiple Stress) funded under the 7th EU Framework Programme, Theme 6 (Environment including Climate Change), Contract No.: 603378 (http://www.mars-project.eu), by Estonian Science Founda tion grant ETF9102 and by national scholarship program Kristjan Jaak, which is funded and managed by Archimedes Foundation in collaboration with the Ministry of Education and Research. This research was supported by Estonian Ministry of Education and Research through the institutional project IUT 21-2 and personal research grant PUT777, by the MARS project (Managing Aquatic ecosystems and water Resources under multiple Stress) funded under the 7th EU Framework Programme, Theme 6 (Environment including Climate Change), Contract No.: 603378 (http://www.mars-project.eu), by Estonian Science Foundation grant ETF9102 and by national scholarship program Kristjan Jaak, which is funded and managed by Archimedes Foundation in collaboration with the Ministry of Education and Research.

Received 11 January 2022; Received in revised form 6 March 2022; Accepted 10 March 2022; Available online 17 March 2022; Editor: Jay Gan Sediment phosphorus (P) recycling is one of the key issues in lake water quality management. We studied sediment P mobility in Võrtsjärv, a large shallow lake in Estonia using both sorption experiments and long-term (1985–2020) monitoring data of the lake. Over the years studied, the lake has undergone a decline in external phosphorus loading (EL), while no improvement in phytoplankton indicators was observed. The results of the sorption experiments revealed that it may be successfully used as a tool to determine P forms involved in P retention, as up to 100%of the P fromthe water column was detected in sediments. Incubation of wet sediment is preferred to dry because of the sensitivity of organic P to desiccation. In the sediments of Võrtsjärv, the labile P (Lab-P) and iron bound (Fe-P) fractions are the major forms of the mobile pool that supply internal P load as sediment released P. The internal P load calculated from summer total P (TP) increases (ILin situ) in the water column was on average 42%, but could reach 240% of EL at extreme environmental conditions. ILin situ was correlated with the active area, which resembles the area involved in redox-related P release in polymictic lakes, and with the mean bottom shear stress in summer. ILin situ showed a similar decreasing pattern as the external P load over the years 1985–2020, and was likely driven by the decrease of the pool of releasable P. Similarly, the decreases in sediment loading by P retention in our P sorption experiment were associated with decreases in the concentration of the potentially mobile P forms (mainly Lab-P and Fe-P). These results show that changes in external P loading can successfully control internal P loading and are useful in water quality management of large lakes. We acknowledge the Estonian Research Council grants PRG709 and PRG1167, also European Union's Horizon 2020 research and innovation programme (project TREICLAKE) under grant agreement No 951963 for providing financial support for the project. We acknowledge the Estonian Research Council grants PRG709 and PRG1167, also European Union's Horizon 2020 research and innovation programme (project TREICLAKE) under grant agreement No 951963 for providing financial support for the project.