1. Accurate information transmission through dynamic biochemical signaling networks
- Author
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Selimkhanov, Jangir, Taylor, Brooks, Yao, Jason, Pilko, Anna, Albeck, John, Hoffmann, Alexander, Tsimring, Lev, and Wollman, Roy
- Subjects
Biochemistry and Cell Biology ,Biological Sciences ,1.1 Normal biological development and functioning ,Calcium Signaling ,Cell Line ,Computer Simulation ,Extracellular Signal-Regulated MAP Kinases ,Humans ,MAP Kinase Signaling System ,NF-kappa B ,Signal Transduction ,Signal-To-Noise Ratio ,Single-Cell Analysis ,Systems Biology ,General Science & Technology - Abstract
Stochasticity inherent to biochemical reactions (intrinsic noise) and variability in cellular states (extrinsic noise) degrade information transmitted through signaling networks. We analyzed the ability of temporal signal modulation--that is, dynamics--to reduce noise-induced information loss. In the extracellular signal-regulated kinase (ERK), calcium (Ca(2+)), and nuclear factor kappa-B (NF-κB) pathways, response dynamics resulted in significantly greater information transmission capacities compared to nondynamic responses. Theoretical analysis demonstrated that signaling dynamics has a key role in overcoming extrinsic noise. Experimental measurements of information transmission in the ERK network under varying signal-to-noise levels confirmed our predictions and showed that signaling dynamics mitigate, and can potentially eliminate, extrinsic noise-induced information loss. By curbing the information-degrading effects of cell-to-cell variability, dynamic responses substantially increase the accuracy of biochemical signaling networks.
- Published
- 2014