1. Genotyping of German and Austrian Taylorella equigenitalis isolates using repetitive extragenic palindromic (REP) PCR and pulsed-field gel electrophoresis (PFGE)
- Author
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Beatrix Stessl, Joachim Spergser, Norman Mauder, Michaela Maurer, R. Sting, Brigitte Martin, Falk Melzer, Klaus Banzhaf, Igor Loncaric, Peter Kopp, Christoph Seeh, and Astrid Raßbach
- Subjects
0301 basic medicine ,Male ,Genotype ,040301 veterinary sciences ,Polymerase Chain Reaction ,0403 veterinary science ,03 medical and health sciences ,Germany ,Taylorella asinigenitalis ,Pulsed-field gel electrophoresis ,Animals ,Horses ,Taylorella equigenitalis ,Genotyping ,Genetics ,Gel electrophoresis ,General Veterinary ,biology ,Inverted Repeat Sequences ,Palindrome ,04 agricultural and veterinary sciences ,biology.organism_classification ,Electrophoresis, Gel, Pulsed-Field ,030104 developmental biology ,Taylorella ,Austria ,Female ,Horse Diseases ,Gram-Negative Bacterial Infections - Abstract
A total of 124 Taylorella (T.) equigenitalis and five T. asinigenitalis field isolates collected between 2002 and 2014 were available for genotyping using REP- (repetitive extragenic palindromic) PCR and PFGE (pulsed-field gel electrophoresis). The study comprised 79 T. equigenitalis field isolates originating from ten defined breeds of German horses and revealed a spectrum of five REP (rep-E1-E4, rep-E3a) and 15 PFGE (TE-A1-A9, TE-B1-B3, TE-C, TE-E1, and TE-E2) genotypes. T. equigenitalis field isolates (n = 40) obtained from Austrian Lipizzaner horses were differentiated into three REP (rep-E1, rep-E3a, and rep-E4) and three PFGE genotypes (TE-A2, TE-A5, and TE-D); those isolated from four Austrian Trotters belonged to the REP/PFGE genotype rep-E2/TE-A1. Interestingly, a T. equigenitalis isolate recovered from a Holsteiner stallion living in South Africa revealed the REP/PFGE genotype rep-E1/TE-A5 which was otherwise exclusively present in the majority of Austrian Lipizzaner horses in our study. The type strain included in this study revealed the genotype REP/PFGE rep-E1/TE-F. Six strains of T. asinigenitalis including the type strain were separated into three REP (rep-A1-A3) and six PFGE genotypes (TA-A1, TA-A2, TA-A3, TA-B, TA-C, TA-D). Overall, the generated REP and PFGE genotypes showed a good correlation, whereas REP-PCR proved to be a suitable method for molecular epidemiological screening of T. equigenitalis and T. asinigenitalis isolates that should be differentiated in detail by genotyping using PFGE.
- Published
- 2016