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The mapping of invasive plant species is essential for effective ecosystem control and planning, especially in protected areas. One of the widespread invasive plants that threatens the species richness of Natura 2000 habitats in Europe is the large-leaved lupine (Lupinus polyphyllus). In our study, this species was identified at two Natura 2000 sites in southern Poland using airborne HySpex hyperspectral images, and support vector machine (SVM) and random forest (RF) classifiers. Aerial and field campaigns were conducted three times during the 2016 growing season (May, August, and September). An iterative accuracy assessment was performed, and the influence of the number of minimum noise fraction (MNF) bands on the obtained accuracy of lupine identification was analyzed. The highest accuracies were obtained for the August campaign using 30 MNF bands as input data (median F1 score for lupine was 0.82–0.85), with lower accuracies for the May (F1 score: 0.77–0.81) and September (F1 score: 0.78–0.80) campaigns. The use of more than 30 MNF bands did not significantly increase the classification accuracy. The SVM and RF algorithms allowed us to obtain comparable results in both research areas (OA: 89–94%). The method of the multiple classification and thresholding of frequency images allowed the results of many predictions to be included in the final map. [ABSTRACT FROM AUTHOR]

One of the key issues in wetland monitoring is mapping vegetation. Remote sensing and machine learning are used to acquire vegetation maps, which, due to the development of sensors and data processing and analysis methods, have increasingly high accuracy. The objectives of this study were to test: (i) which of the textural information (TI) features have the highest information potential for identifying wetland communities; and (ii) whether the use of TI improves the accuracy of wetland communities mapping using hyperspectral (HS) and Airborne Laser Scanning (ALS) data. The analysis indicated that the mean and entropy features of the Gray Level Co-occurrence Matrix had the highest potential to differentiate between various wetland communities. Adding these features to the dataset resulted in a small increase (0.005) in average F1 accuracy based on HS data and 0.011 for HS and ALS scenarios in wetland communities classification, and adding TI improved the delineation of patch boundaries. A higher increase was noted for forest and scrub vegetation (by 0.019 for the HS scenario and 0.022 for the HS and ALS scenario) and rushes (only for the HS and ALS scenario 0.017). It can be concluded that it is reasonable to use textural information for mapping wetland communities, especially for areas with a high proportion of scrub and forest and rushes vegetation included in the analysis. [ABSTRACT FROM AUTHOR]

Europe's mountain forests, which are naturally valuable areas due to their high biodiversity and well-preserved natural characteristics, are experiencing major alterations, so an important component of monitoring is obtaining up-to-date information concerning species composition, extent, and location. An important aspect of mapping tree stands is the selection of remote sensing data that vary in temporal, spectral, and spatial resolution, as well as in open and commercial access. For the Tatra Mountains area, which is a unique alpine ecosystem in central Europe, we classified 13 woody species by iterative machine learning methods using random forest (RF) and support vector machine (SVM) algorithms of more than 1000 polygons collected in the field. For this task, we used free Sentinel-2 multitemporal satellite data (10 m pixel size, 12 spectral bands, and 21 acquisition dates), commercial PlanetScope data (3 m pixel size, 8 spectral bands, and 3 acquisitions dates), and airborne HySpex hyperspectral data (2 m pixel size, 430 spectral bands, and a single acquisition) with fusion of the data of topographic derivatives based on Shuttle Radar Topography Mission (SRTM) and airborne laser scanning (ALS) data. The iterative classification method achieved the highest F1-score with HySpex (0.95 RF; 0.92 SVM) imagery, but the multitemporal Sentinel-2 data cube, which consisted of 21 scenes, offered comparable results (0.93 RF; 0.89 SVM). The three images of the high-resolution PlanetScope produced slightly less accurate results (0.89 RF; 0.87 SVM). [ABSTRACT FROM AUTHOR]

Recent developments in computer hardware made it possible to assess the viability of permutation-based approaches in image classification. Such approaches sample a reference dataset multiple times in order to train an arbitrary number of machine learning models while assessing their accuracy. So-called iterative accuracy assessment techniques or Monte-Carlo-based approaches can be a useful tool when it comes to assessment of algorithm/model performance but are lacking when it comes to actual image classification and map creation. Due to the multitude of models trained, one has to somehow reason which one of them, if any, should be used in the creation of a map. This poses an interesting challenge since there is a clear disconnect between algorithm assessment and the act of map creation. Our work shows one of the ways this disconnect can be bridged. We calculate how often a given pixel was classified as given class in all variations of a multitude of post-classification images delivered by models trained during the iterative assessment procedure. As a classification problem, a mapping of Calamagrostis epigejos, Rubus spp., Solidago spp. invasive plant species using three HySpex hyperspectral datasets collected in June, August and September was used. As a classification algorithm, the support vector machine approach was chosen, with training hyperparameters obtained using a grid search approach. The resulting maps obtained F1-scores ranging from 0.87 to 0.89 for Calamagrostis epigejos, 0.89 to 0.97 for Rubus spp. and 0.99 for Solidago spp.

A pilot study for mapping the Arctic wetlands was conducted in the Yukon Flats National Wildlife Refuge (Refuge), Alaska. It included commissioning the HySpex VNIR-1800 and the HySpex SWIR-384 imaging spectrometers in a single-engine Found Bush Hawk aircraft, planning the flight times, direction, and speed to minimize the strong bidirectional reflectance distribution function (BRDF) effects present at high latitudes and establishing improved data processing workflows for the high-latitude environments. Hyperspectral images were acquired on two clear-sky days in early September, 2018, over three pilot study areas that together represented a wide variety of vegetation and wetland environments. Steps to further minimize BRDF effects and achieve a higher geometric accuracy were added to adapt and improve the Hyspex data processing workflow, developed by the German Aerospace Center (DLR), for high-latitude environments. One-meter spatial resolution hyperspectral images, that included a subset of only 120 selected spectral bands, were used for wetland mapping. A six-category legend was established based on previous U.S. Geological Survey (USGS) and U.S. Fish and Wildlife Service (USFWS) information and maps, and three different classification methods—hybrid classification, spectral angle mapper, and maximum likelihood—were used at two selected sites. The best classification performance occurred when using the maximum likelihood classifier with an averaged Kappa index of 0.95; followed by the spectral angle mapper (SAM) classifier with a Kappa index of 0.62; and, lastly, by the hybrid classifier showing lower performance with a Kappa index of 0.51. Recommendations for improvements of future work include the concurrent acquisition of LiDAR or RGB photo-derived digital surface models as well as detailed spectra collection for Alaska wetland cover to improve classification efforts.

Shadows are frequently observable in high-resolution images, raising challenges in image interpretation, such as classification and object detection. In this paper, we propose a novel framework for shadow detection and restoration of atmospherically corrected hyperspectral images based on nonlinear spectral unmixing. The mixture model is applied pixel-wise as a nonlinear combination of endmembers related to both pure sunlit and shadowed spectra, where the former are manually selected from scenes and the latter are derived from sunlit spectra following physical assumptions. Shadowed pixels are restored by simulating their exposure to sunlight through a combination of sunlit endmembers spectra, weighted by abundance values. The proposed framework is demonstrated on real airborne hyperspectral images. A comprehensive assessment of the restored images is carried out both visually and quantitatively. With respect to binary shadow masks, our framework can produce soft shadow detection results, keeping the natural transition of illumination conditions on shadow boundaries. Our results show that the framework can effectively detect shadows and restore information in shadowed regions.

The study was focused on a plant native to Poland, the European dewberry Rubus caesius L., which is a species with the ability to become excessively abundant within its original range, potentially causing significant changes in ecosystems, including biodiversity loss. Monitoring plant distributions over large areas requires mapping that is fast, reliable, and repeatable. For Rubus, different types of data were successfully used for classification, but most of the studies used data with a very high spectral resolution. The aim of this study was to indicate, using hyperspectral and Light Detection and Ranging (LiDAR) data, the main functional trait crucial for R. caesius differentiation from non-Rubus. This analysis was carried out with consideration of the seasonal variability and different percentages of R. caesius in the vegetation patches. The analysis was based on hyperspectral HySpex images and Airborne Laser Scanning (ALS) products. Data were acquired during three campaigns: early summer, summer, and autumn. Differentiation based on Linear Discriminate Analysis (LDA) and Non-Parametric Multivariate Analysis of Variance (NPMANOVA) analysis was successful for each of the analysed campaigns using optical data, but the ALS data were less useful for identification. The analysis indicated that selected spectral ranges (VIS, red-edge, and parts of the NIR and possibly SWIR ranges) can be useful for differentiating R. caesius from non-Rubus. The most useful indices were ARI1, CRI1, ARVI, GDVI, CAI, NDNI, and MRESR. The obtained results indicate that it is possible to classify R. caesius using images with lower spectral resolution than hyperspectral data.

In this study, an in situ application for identifying neodymium (Nd) enriched surface materials that uses multitemporal hyperspectral images is presented (HySpex sensor). Because of the narrow shape and shallow absorption depth of the neodymium absorption feature, a method was developed for enhancing and extracting the necessary information for neodymium from image spectra, even under illumination conditions that are not optimal. For this purpose, the two following approaches were developed: (1) reducing noise and analyzing changing illumination conditions by averaging multitemporal image scenes and (2) enhancing the depth of the desired absorption band by deconvolving every image spectrum with a Gaussian curve while the rest of the spectrum remains unchanged (Richardson-Lucy deconvolution). To evaluate these findings, nine field samples from the Fen complex in Norway were analyzed using handheld X-ray fluorescence devices and by conducting detailed laboratory-based geochemical rare earth element determinations. The result is a qualitative outcrop map that highlights zones that are enriched in neodymium. To reduce the influences of non-optimal illumination, particularly at the studied site, a minimum of seven single acquisitions is required. Sharpening the neodymium absorption band allows for robust mapping, even at the outer zones of enrichment. From the geochemical investigations, we found that iron oxides decrease the applicability of the method. However, iron-related absorption bands can be used as secondary indicators for sulfidic ore zones that are mainly enriched with rare earth elements. In summary, we found that hyperspectral spectroscopy is a noninvasive, fast and cost-saving method for determining neodymium at outcrop surfaces.

In this study, an in situ application for identifying neodymium (Nd) enriched surface materials that uses multitemporal hyperspectral images is presented (HySpex sensor). Because of the narrow shape and shallow absorption depth of the neodymium absorption feature, a method was developed for enhancing and extracting the necessary information for neodymium from image spectra, even under illumination conditions that are not optimal. For this purpose, the two following approaches were developed: (1) reducing noise and analyzing changing illumination conditions by averaging multitemporal image scenes and (2) enhancing the depth of the desired absorption band by deconvolving every image spectrum with a Gaussian curve while the rest of the spectrum remains unchanged (Richardson-Lucy deconvolution). To evaluate these findings, nine field samples from the Fen complex in Norway were analyzed using handheld X-ray fluorescence devices and by conducting detailed laboratory-based geochemical rare earth element determinations. The result is a qualitative outcrop map that highlights zones that are enriched in neodymium. To reduce the influences of non-optimal illumination, particularly at the studied site, a minimum of seven single acquisitions is required. Sharpening the neodymium absorption band allows for robust mapping, even at the outer zones of enrichment. From the geochemical investigations, we found that iron oxides decrease the applicability of the method. However, iron-related absorption bands can be used as secondary indicators for sulfidic ore zones that are mainly enriched with rare earth elements. In summary, we found that hyperspectral spectroscopy is a noninvasive, fast and cost-saving method for determining neodymium at outcrop surfaces. [ABSTRACT FROM AUTHOR]

Recent developments in computer hardware made it possible to assess the viability of permutation-based approaches in image classification. Such approaches sample a reference dataset multiple times in order to train an arbitrary number of machine learning models while assessing their accuracy. So-called iterative accuracy assessment techniques or Monte-Carlo-based approaches can be a useful tool when it comes to assessment of algorithm/model performance but are lacking when it comes to actual image classification and map creation. Due to the multitude of models trained, one has to somehow reason which one of them, if any, should be used in the creation of a map. This poses an interesting challenge since there is a clear disconnect between algorithm assessment and the act of map creation. Our work shows one of the ways this disconnect can be bridged. We calculate how often a given pixel was classified as given class in all variations of a multitude of post-classification images delivered by models trained during the iterative assessment procedure. As a classification problem, a mapping of Calamagrostis epigejos, Rubus spp., Solidago spp. invasive plant species using three HySpex hyperspectral datasets collected in June, August and September was used. As a classification algorithm, the support vector machine approach was chosen, with training hyperparameters obtained using a grid search approach. The resulting maps obtained F1-scores ranging from 0.87 to 0.89 for Calamagrostis epigejos, 0.89 to 0.97 for Rubus spp. and 0.99 for Solidago spp. [ABSTRACT FROM AUTHOR]

A pilot study for mapping the Arctic wetlands was conducted in the Yukon Flats National Wildlife Refuge (Refuge), Alaska. It included commissioning the HySpex VNIR-1800 and the HySpex SWIR-384 imaging spectrometers in a single-engine Found Bush Hawk aircraft, planning the flight times, direction, and speed to minimize the strong bidirectional reflectance distribution function (BRDF) effects present at high latitudes and establishing improved data processing workflows for the high-latitude environments. Hyperspectral images were acquired on two clear-sky days in early September, 2018, over three pilot study areas that together represented a wide variety of vegetation and wetland environments. Steps to further minimize BRDF effects and achieve a higher geometric accuracy were added to adapt and improve the Hyspex data processing workflow, developed by the German Aerospace Center (DLR), for high-latitude environments. One-meter spatial resolution hyperspectral images, that included a subset of only 120 selected spectral bands, were used for wetland mapping. A six-category legend was established based on previous U.S. Geological Survey (USGS) and U.S. Fish and Wildlife Service (USFWS) information and maps, and three different classification methods—hybrid classification, spectral angle mapper, and maximum likelihood—were used at two selected sites. The best classification performance occurred when using the maximum likelihood classifier with an averaged Kappa index of 0.95; followed by the spectral angle mapper (SAM) classifier with a Kappa index of 0.62; and, lastly, by the hybrid classifier showing lower performance with a Kappa index of 0.51. Recommendations for improvements of future work include the concurrent acquisition of LiDAR or RGB photo-derived digital surface models as well as detailed spectra collection for Alaska wetland cover to improve classification efforts. [ABSTRACT FROM AUTHOR]

The study was focused on a plant native to Poland, the European dewberry Rubus caesius L., which is a species with the ability to become excessively abundant within its original range, potentially causing significant changes in ecosystems, including biodiversity loss. Monitoring plant distributions over large areas requires mapping that is fast, reliable, and repeatable. For Rubus, different types of data were successfully used for classification, but most of the studies used data with a very high spectral resolution. The aim of this study was to indicate, using hyperspectral and Light Detection and Ranging (LiDAR) data, the main functional trait crucial for R. caesius differentiation from non-Rubus. This analysis was carried out with consideration of the seasonal variability and different percentages of R. caesius in the vegetation patches. The analysis was based on hyperspectral HySpex images and Airborne Laser Scanning (ALS) products. Data were acquired during three campaigns: early summer, summer, and autumn. Differentiation based on Linear Discriminate Analysis (LDA) and Non-Parametric Multivariate Analysis of Variance (NPMANOVA) analysis was successful for each of the analysed campaigns using optical data, but the ALS data were less useful for identification. The analysis indicated that selected spectral ranges (VIS, red-edge, and parts of the NIR and possibly SWIR ranges) can be useful for differentiating R. caesius from non-Rubus. The most useful indices were ARI1, CRI1, ARVI, GDVI, CAI, NDNI, and MRESR. The obtained results indicate that it is possible to classify R. caesius using images with lower spectral resolution than hyperspectral data. [ABSTRACT FROM AUTHOR]

Shadows are frequently observable in high-resolution images, raising challenges in image interpretation, such as classification and object detection. In this paper, we propose a novel framework for shadow detection and restoration of atmospherically corrected hyperspectral images based on nonlinear spectral unmixing. The mixture model is applied pixel-wise as a nonlinear combination of endmembers related to both pure sunlit and shadowed spectra, where the former are manually selected from scenes and the latter are derived from sunlit spectra following physical assumptions. Shadowed pixels are restored by simulating their exposure to sunlight through a combination of sunlit endmembers spectra, weighted by abundance values. The proposed framework is demonstrated on real airborne hyperspectral images. A comprehensive assessment of the restored images is carried out both visually and quantitatively. With respect to binary shadow masks, our framework can produce soft shadow detection results, keeping the natural transition of illumination conditions on shadow boundaries. Our results show that the framework can effectively detect shadows and restore information in shadowed regions. [ABSTRACT FROM AUTHOR]