1. 不同DNA聚合酶对运用ARTIC工作流的新型冠状病毒纳米孔测序的影响.
- Author
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李瑾慧, 李沛翰, 林彦锋, 王凯英, 李利忠, 邱少富, 李鹏, 宋宏彬, and 贾雷立
- Subjects
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COVID-19 , *DNA polymerases , *NUCLEIC acids , *SARS-CoV-2 , *WORKFLOW - Abstract
Objective: To verify whether the selection of different high-fidelity DNA polymerases has an impact on the results of nanopore sequencing of SARS-CoV-2 with ARTIC-nCoV network workflow. Methods: Multiplex PCR amplification of ARTIC-nCoV network workflow were performed on nucleic acid samples of two confirmed COVID-19 patients with KAPA HiFi HotStart ReadyMix, PrimeSTAR GXL DNA Polymerase or NEBNext High-Fidelity 2X PCR Master Mix. The amplicons were sequenced on Nanopore MinION platform, then were analyzed. Results: Under same conditions, different high-fidelity DNA polymerases lead to different results of quality inspection and sequencing quality. NEBNext High-Fidelity 2X PCR Master Mix is the best among the three enzymes in coverage and sequencing depth. Conclusion: NEBNext High-Fidelity 2X PCR Master Mix has better effect in nanopore sequencing with ARTIC-nCoV network workflow. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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