5 results on '"Hadfield, Jarrod"'
Search Results
2. Changes in temperature alter the potential outcomes of virus host shifts
- Author
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Roberts, Katherine E., Hadfield, Jarrod D., Sharma, Manmohan D., and Longdon, Ben
- Subjects
0106 biological sciences ,0301 basic medicine ,Male ,Metabolic Analysis ,Atmospheric Science ,Pathogenesis ,Pathology and Laboratory Medicine ,01 natural sciences ,Medicine and Health Sciences ,Drosophilidae ,Critical thermal maximum ,Pathogen ,lcsh:QH301-705.5 ,Phylogeny ,Data Management ,Climatology ,biology ,Drosophila Melanogaster ,Temperature ,Eukaryota ,Animal Models ,Viral Load ,Phylogenetics ,Insects ,Chemistry ,Bioassays and Physiological Analysis ,Experimental Organism Systems ,Host-Pathogen Interactions ,Physical Sciences ,Emerging infectious disease ,Drosophila ,Disease Susceptibility ,Viral load ,Research Article ,lcsh:Immunologic diseases. Allergy ,Computer and Information Sciences ,Arthropoda ,Climate Change ,Immunology ,Zoology ,Research and Analysis Methods ,010603 evolutionary biology ,Microbiology ,Host Specificity ,03 medical and health sciences ,Greenhouse Gases ,Model Organisms ,Virology ,Basal Metabolic Rate Measurement ,Genetics ,Animals ,RNA Viruses ,Environmental Chemistry ,Evolutionary Systematics ,Molecular Biology ,Taxonomy ,Evolutionary Biology ,Host (biology) ,Ecology and Environmental Sciences ,Chemical Compounds ,Organisms ,Biology and Life Sciences ,Carbon Dioxide ,biology.organism_classification ,Invertebrates ,Viral Replication ,030104 developmental biology ,Viral replication ,lcsh:Biology (General) ,13. Climate action ,Atmospheric Chemistry ,Earth Sciences ,Animal Studies ,Parasitology ,lcsh:RC581-607 ,Viral Transmission and Infection - Abstract
Host shifts–where a pathogen jumps between different host species–are an important source of emerging infectious disease. With on-going climate change there is an increasing need to understand the effect changes in temperature may have on emerging infectious disease. We investigated whether species’ susceptibilities change with temperature and ask if susceptibility is greatest at different temperatures in different species. We infected 45 species of Drosophilidae with an RNA virus and measured how viral load changes with temperature. We found the host phylogeny explained a large proportion of the variation in viral load at each temperature, with strong phylogenetic correlations between viral loads across temperature. The variance in viral load increased with temperature, while the mean viral load did not. This suggests that as temperature increases the most susceptible species become more susceptible, and the least susceptible less so. We found no significant relationship between a species’ susceptibility across temperatures, and proxies for thermal optima (critical thermal maximum and minimum or basal metabolic rate). These results suggest that whilst the rank order of species susceptibilities may remain the same with changes in temperature, some species may become more susceptible to a novel pathogen, and others less so., Author summary Emerging infectious diseases are often the result of a host shift, where a pathogen jumps from one host species into another. Understanding the factors underlying host shifts is a major goal for infectious disease research. This effort has been further complicated by the fact that host-parasite interactions are now taking place in a period of unprecedented global climatic warming. Here, we ask how host shifts are affected by temperature by carrying out experimental infections using an RNA virus across a wide range of related species, at three different temperatures. We find that as temperature increases the most susceptible species become more susceptible, and the least susceptible less so. This has important consequences for our understanding of host shift events in a changing climate as it suggests that temperature changes may affect the likelihood of a host shift into certain species.
- Published
- 2018
3. The causes and consequences of changes in virulence following pathogen host shifts
- Author
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Longdon, Ben, Hadfield, Jarrod D., Day, Jonathan P., Smith, Sophia C L, McGonigle, John E., Cogni, Rodrigo, Cao, Chuan, Jiggins, Francis M., Day, Jonathan [0000-0002-4386-3020], Jiggins, Francis [0000-0001-7470-8157], and Apollo - University of Cambridge Repository
- Subjects
Virulence ,Reverse Transcriptase Polymerase Chain Reaction ,QH301-705.5 ,education ,Viral Load ,RC581-607 ,Host Specificity ,Animals ,RNA Viruses ,Drosophila ,Immunologic diseases. Allergy ,Biology (General) ,Phylogeny ,Research Article - Abstract
Emerging infectious diseases are often the result of a host shift, where the pathogen originates from a different host species. Virulence—the harm a pathogen does to its host—can be extremely high following a host shift (for example Ebola, HIV, and SARs), while other host shifts may go undetected as they cause few symptoms in the new host. Here we examine how virulence varies across host species by carrying out a large cross infection experiment using 48 species of Drosophilidae and an RNA virus. Host shifts resulted in dramatic variation in virulence, with benign infections in some species and rapid death in others. The change in virulence was highly predictable from the host phylogeny, with hosts clustering together in distinct clades displaying high or low virulence. High levels of virulence are associated with high viral loads, and this may determine the transmission rate of the virus., Author Summary Many emerging infectious diseases are the result of a host shift, with the pathogen jumping into the new host from another species. Virulence—the harm a pathogen does to its host—can be extremely high following a host shift (for example HIV, SARs and Ebola), while other host shifts may go undetected as they cause few symptoms in the new host. We have found that variation in virulence following host shifts can be extremely large and were highly predictable from the host phylogeny, with hosts clustering together in distinct clades displaying high or low virulence. These changes in virulence result from changes in viral load, and therefore the transmission potential of the virus. This suggests there is no clear rule to predict whether a pathogen will be virulent in a novel host. However, it does suggest a simple rule of thumb may be that if a pathogen causes high levels of virulence in any given host species, it will typically cause similar levels of virulence in closely related hosts.
- Published
- 2015
4. Host Phylogeny Determines Viral Persistence and Replication in Novel Hosts
- Author
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Longdon, Ben, primary, Hadfield, Jarrod D., additional, Webster, Claire L., additional, Obbard, Darren J., additional, and Jiggins, Francis M., additional
- Published
- 2011
- Full Text
- View/download PDF
5. The Contribution of Viral Genotype to Plasma Viral Set-Point in HIV Infection.
- Author
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Hodcroft, Emma, Hadfield, Jarrod D., Fearnhill, Esther, Phillips, Andrew, Dunn, David, O'Shea, Siobhan, Pillay, Deenan, and Leigh Brown, Andrew J.
- Subjects
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HIV infection genetics , *VIRAL genetics , *VIRAL load , *EPIDEMIC research , *QUANTITATIVE genetics - Abstract
Disease progression in HIV-infected individuals varies greatly, and while the environmental and host factors influencing this variation have been widely investigated, the viral contribution to variation in set-point viral load, a predictor of disease progression, is less clear. Previous studies, using transmission-pairs and analysis of phylogenetic signal in small numbers of individuals, have produced a wide range of viral genetic effect estimates. Here we present a novel application of a population-scale method based in quantitative genetics to estimate the viral genetic effect on set-point viral load in the UK subtype B HIV-1 epidemic, based on a very large data set. Analyzing the initial viral load and associated pol sequence, both taken before anti-retroviral therapy, of 8,483 patients, we estimate the proportion of variance in viral load explained by viral genetic effects to be 5.7% (CI 2.8–8.6%). We also estimated the change in viral load over time due to selection on the virus and environmental effects to be a decline of 0.05 log10 copies/mL/year, in contrast to recent studies which suggested a reported small increase in viral load over the last 20 years might be due to evolutionary changes in the virus. Our results suggest that in the UK epidemic, subtype B has a small but significant viral genetic effect on viral load. By allowing the analysis of large sample sizes, we expect our approach to be applicable to the estimation of the genetic contribution to traits in many organisms. [ABSTRACT FROM AUTHOR]
- Published
- 2014
- Full Text
- View/download PDF
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