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2 results on '"Chuansong Zhan"'

1. The Transcript Profile of a Traditional Chinese Medicine, Atractylodes lancea, Revealing Its Sesquiterpenoid Biosynthesis of the Major Active Components.

Author

Shakeel Ahmed, Chuansong Zhan, Yanyan Yang, Xuekui Wang, Tewu Yang, Zeying Zhao, Qiyun Zhang, Xiaohua Li, and Xuebo Hu

Subjects
Medicine, Science
Abstract

Atractylodes lancea (Thunb.) DC., named "Cangzhu" in China, which belongs to the Asteraceae family. In some countries of Southeast Asia (China, Thailand, Korea, Japan etc.) its rhizome, commonly called rhizoma atractylodis, is used to treat many diseases as it contains a variety of sesquiterpenoids and other components of medicinal importance. Despite its medicinal value, the information of the sesquiterpenoid biosynthesis is largely unknown. In this study, we investigated the transcriptome analysis of different tissues of non-model plant A. lancea by using short read sequencing technology (Illumina). We found 62,352 high quality unigenes with an average sequence length of 913 bp in the transcripts of A. Lancea. Among these, 43,049 (69.04%), 30,264 (48.53%), 26,233 (42.07%), 17,881 (28.67%) and 29,057(46.60%) unigenes showed significant similarity (E-value

Published
2016
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2. The Transcript Profile of a Traditional Chinese Medicine, Atractylodes lancea, Revealing Its Sesquiterpenoid Biosynthesis of the Major Active Components

Author

Xuekui Wang, Shakeel Ahmed, Xuebo Hu, Xiaohua Li, Yanyan Yang, Tewu Yang, Zeying Zhao, Chuansong Zhan, and Qiyun Zhang

Subjects
0301 basic medicine, Leaves, lcsh:Medicine, Gene Expression, Plant Science, Biochemistry, Terpene, Database and Informatics Methods, Medicine, Chinese Traditional, lcsh:Science, Multidisciplinary, biology, Organic Compounds, Plant Anatomy, Gene Ontologies, Genomics, Chemistry, Physical Sciences, Atractylodes lancea, Sesquiterpenes, Transcriptome Analysis, Sequence Analysis, Research Article, Sequence Databases, Research and Analysis Methods, Biosynthesis, Polymorphism, Single Nucleotide, 03 medical and health sciences, Sequence Motif Analysis, Botany, Genetics, RNA, Messenger, KEGG, Molecular Biology Techniques, Sequencing Techniques, Molecular Biology, Terpenes, Gene Expression Profiling, lcsh:R, Organic Chemistry, Chemical Compounds, Computational Biology, Biology and Life Sciences, Atractylodes, Asteraceae, biology.organism_classification, Genome Analysis, Terpenoid, Rhizome, Biosynthetic Pathways, Gene expression profiling, 030104 developmental biology, Biological Databases, lcsh:Q, Microsatellite Repeats
Abstract

Atractylodes lancea (Thunb.) DC., named "Cangzhu" in China, which belongs to the Asteraceae family. In some countries of Southeast Asia (China, Thailand, Korea, Japan etc.) its rhizome, commonly called rhizoma atractylodis, is used to treat many diseases as it contains a variety of sesquiterpenoids and other components of medicinal importance. Despite its medicinal value, the information of the sesquiterpenoid biosynthesis is largely unknown. In this study, we investigated the transcriptome analysis of different tissues of non-model plant A. lancea by using short read sequencing technology (Illumina). We found 62,352 high quality unigenes with an average sequence length of 913 bp in the transcripts of A. Lancea. Among these, 43,049 (69.04%), 30,264 (48.53%), 26,233 (42.07%), 17,881 (28.67%) and 29,057(46.60%) unigenes showed significant similarity (E-value

Published
2016

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