33 results on '"Barbosa DA"'
Search Results
2. Yield of soybean genotypes identified through GGE biplot and path analysis
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Silva, Welder José dos Santos, primary, Alcântara Neto, Francisco de, additional, Al-Qahtani, Wahidah H., additional, Okla, Mohammad K., additional, Al-Hashimi, Abdulrahman, additional, Vieira, Paulo Fernando de Melo Jorge, additional, Gravina, Geraldo de Amaral, additional, Zuffo, Alan Mario, additional, Dutra, Alexson Filgueiras, additional, Carvalho, Leonardo Castelo Branco, additional, Sousa, Ricardo Silva de, additional, Pereira, Arthur Prudêncio de Araujo, additional, Leite, Wallace de Sousa, additional, Silva Júnior, Gabriel Barbosa da, additional, Silva, Adriana Conceição da, additional, Leite, Marcos Renan Lima, additional, Lustosa Sobrinho, Renato, additional, and AbdElgawad, Hamada, additional
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- 2022
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3. Heterogeneity of variance and genetic parameters for milk production in cattle, using Bayesian inference.
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Júnior, Raimundo Nonato Colares Camargo, Fernandes, Luane da Silva, do Carmo Panetto, João Cláudio, Barbosa da Silva, Marcos Vinicius Gualberto, de Araújo, Cláudio Vieira, Maciel e Silva, André Guimarães, Felipe Marques, José Ribamar, Silva, Welligton Conceição da, de Araújo, Simone Inoe, Castro, Sâmia Rubielle Silva de, Silva, Lilian Kátia Ximenes, Castro, Simone Vieira, and Júnior, José de Brito Lourenço
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MILK yield ,BAYESIAN field theory ,FIXED effects model ,GIBBS sampling ,GENETIC correlations ,HETEROGENEITY ,CATTLE breeds ,HOLSTEIN-Friesian cattle - Abstract
The goal of this study was to verify the effect of heterogeneity of variance (HV) on milk production in up to 305 days of lactation (L305) of daughters of Girolando, Gir and Holstein sires, as well as in the genetic evaluation of these sires and their progenies. in Brazil. The model included contemporary groups (consisting of herd, year and calving season) as a fixed effect, cow age at calving (linear and quadratic effects) and heterozygosity (linear effect) as covariates, in addition to the random effects of direct additive genetic and environmental, permanent and residual. The first analysis consisted of the single-trait animal model, with L305 records (disregarding HV). The second considered classes of standard deviations (SD): two-trait model including low and high classes (considering HV), according to the standardized means of L305 for herd-year of calving. The low SD class was composed of herds with SD equal to or less than zero and the high class with positive SD values. Estimates of (co)variance components and breeding values were obtained separately for each scenario using Bayesian inference via Gibbs sampling. Different heritability was estimated. Higher for the high DP class in the Gir (0.20) and Holstein (0.15) breeds, not occurring the same in the Girolando breed, with a lower value among the classes for the high DP (0.10). High values of genetic correlations were also found between low and high SD classes (0.88; 0.85 and 0.79) for the Girolando, Gir and Holstein breeds, respectively. Like the order correlations (Spearman) which were also high for the three breeds analyzed (equal to or above 0.92). Thus, the presence of HV had a smaller impact for L305 and did not affect the genetic evaluation of sires. [ABSTRACT FROM AUTHOR]
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- 2023
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4. Understanding the contribution of soybean crop residues inoculated with Bradyrhizobium spp. and not harvested on nitrogen supply in off-season corn cultivars
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Alan Mario Zuffo, Rafael Felippe Ratke, Mohammad K. Okla, Abdulrahman Al-Hashimi, Jorge González Aguilera, Amanda Camila Silva Trento, Natielly Pereira da Silva, Edicarlos Damacena de Souza, Bruna Karolayne Andrade Nogueira, Jéssica Heloiza Coutinho, Fábio Steiner, Francisco de Alcântara Neto, Gabriel Barbosa da Silva Júnior, Francisco Charles dos Santos Silva, Renato Lustosa Sobrinho, and Hamada AbdElgawad
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Soil ,Multidisciplinary ,Nitrogen ,Agriculture ,Fabaceae ,Bradyrhizobium ,Seasons ,Soybeans ,Fertilizers ,Zea mays ,Biology - Abstract
Excessive rainfall in the soybean preharvest period can make mechanized crop harvesting technically and economically unfeasible, causing 100% losses in soybean grain yield. An alternative to reduce the economic losses of farmers would be using unharvested soybean crop residues as a source of nitrogen (N) for the subsequent corn crop. However, a question that still needs to be understood is whether the amount of N released from unharvested soybean residues (straw and grains) is sufficient to meet all the nutritional demand for this nutrient in the off-season corn. Therefore, this study investigated the impact of unharvested soybean crop residue persistence on the yield response of off-season corn crop (Zea mays L.) to the application of N fertilizer rates when grown in tropical Cerrado soils of medium and high fertility. Four simple corn hybrids (SYN7G17 TL, 30F53VYHR, B2433PWU, and AG 8700 PRO3) were grown in soils of medium fertility and medium acidity level (UFMS 1) and high fertility and low acidity level (UFMS 2) and fertilized with five of N fertilizer rates (0, 40, 80, 120, and 160 kg ha–1 of N) applied at 30 days after emergence (DAE). Canonical correlation analysis (CCA) was used to investigate the interrelationships between the groups of independent (agricultural production areas, corn cultivars, and N application rates) and dependent (corn agronomic traits) variables. Crop residues remaining on the soil surface from soybeans not harvested and inoculated with Bradyrhizobium spp. can supply most of the nitrogen requirement of off-season corn grown in succession, especially in tropical soils of medium fertility. However, in high-fertility tropical soils, the maximum grain yield potential of off-season corn cultivars can be obtained with the application of mineral N fertilizer in supplement the amount of nitrogen released from unharvested soybean residues. Therefore, the N requirement depends on the corn cultivar and the agricultural production area. However, our results show that when off-season corn is grown on unharvested soybean residues, nitrogen fertilization in topdressing can be dispensed. The agricultural area with high fertility soil (UFMS 2) enhances the grain yield of the off-season corn crop. The corn cultivar AG 8700 PRO3 has a higher thousand-grain mass and high grain yield potential under Brazilian Cerrado conditions.
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- 2022
5. Clozapine prevented social interaction deficits and reduced c-Fos immunoreactivity expression in several brain areas of rats exposed to acute restraint stress
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Rodolpho Pereira de Oliveira, José Simões de Andrade, Marianna Spina, João Vítor Chamon, Paulo Henrique Dias Silva, Ana Keyla Werder, Daniela Ortolani, Lucas de Santana Cardoso Thomaz, Simone Romariz, Daniel Araki Ribeiro, Beatriz Monteiro Longo, Regina Célia Spadari, Milena de Barros Viana, Liana Melo-Thomas, Isabel Cristina Céspedes, and Regina Cláudia Barbosa da Silva
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Restraint, Physical ,Multidisciplinary ,nervous system - Abstract
In the present study, we evaluate the effect of acute restraint stress (15 min) of male Wistar rats on social interaction measurements and c-Fos immunoreactivity (c-Fos-ir) expression, a marker of neuronal activity, in areas involved with the modulation of acute physical restraint in rats, i.e., the paraventricular nucleus of the hypothalamus (PVN), median raphe nucleus (MnR), medial prefrontal cortex (mPFC), cingulate prefrontal cortex (cPFC), nucleus accumbens (NaC), hippocampus (CA3), lateral septum (LS) and medial amygdala (MeA). We considered the hypothesis that restraint stress exposure could promote social withdrawal induced by the activation of the hypothalamic-pituitary-adrenocortical (HPA) axis, and increase c-Fos expression in these limbic forebrain areas investigated. In addition, we investigated whether pretreatment with the atypical antipsychotic clozapine (5 mg/kg; I.P.) could attenuate or block the effects of restraint on these responses. We found that restraint stress induced social withdrawal, and increased c-Fos-ir in these areas, demonstrating that a single 15 min session of physical restraint of rats effectively activated the HPA axis, representing an effective tool for the investigation of neuronal activity in brain regions sensitive to stress. Conversely, pretreatment with clozapine, prevented social withdrawal and reduced c-Fos expression. We suggest that treatment with clozapine exerted a preventive effect in the social interaction deficit, at least in part, by blocking the effect of restraint stress in brain regions that are known to regulate the HPA-axis, including the cerebral cortex, hippocampus, hypothalamus, septum and amygdala. Further experiments will be done to confirm this hypothesis.
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- 2020
6. Lipopolysaccharide triggers different transcriptional signatures in taurine and indicine cattle macrophages: Reactive oxygen species and potential outcomes to the development of immune response to infections
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Felipe de Oliveira Vieira, Marcos Vinícius Gualberto Barbosa da Silva, Raquel Morais de Paiva Daibert, Hyago Passe Pereira, Marta Fonseca Martins, Humberto M. Brandão, Eugenio D. Hottz, Daniele Ribeiro de Lima Reis Faza, Carlos Alberto Oliveira de Biagi Junior, W. A. Carvalho, Mariana Brandi Mendonça Pinheiro, and Marco Antonio Machado
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0301 basic medicine ,Lipopolysaccharides ,Chemokine ,Molecular biology ,Gene Expression ,Breeding ,White Blood Cells ,Sequencing techniques ,Animal Cells ,Medicine and Health Sciences ,Gene Regulatory Networks ,Immune Response ,Mammals ,Toll-like receptor ,education.field_of_study ,Multidisciplinary ,biology ,PARASITISMO ,Nitric oxide synthase 2 ,Eukaryota ,Software Engineering ,Cell Differentiation ,RNA sequencing ,04 agricultural and veterinary sciences ,Ruminants ,Vertebrates ,Medicine ,Engineering and Technology ,Cellular Types ,Extracellular matrix organization ,Research Article ,Computer and Information Sciences ,Science ,Immune Cells ,Population ,Immunology ,Macrophage polarization ,Proinflammatory cytokine ,Computer Software ,03 medical and health sciences ,Signs and Symptoms ,Species Specificity ,Bovines ,Genetics ,Animals ,education ,Inflammation ,Blood Cells ,Sequence Analysis, RNA ,Gene Expression Profiling ,Macrophages ,0402 animal and dairy science ,Organisms ,Biology and Life Sciences ,Cell Biology ,Macrophage Activation ,040201 dairy & animal science ,Research and analysis methods ,030104 developmental biology ,Molecular biology techniques ,Gene Expression Regulation ,Amniotes ,TLR4 ,biology.protein ,Cattle ,Clinical Medicine ,Reactive Oxygen Species ,Zoology ,Developmental Biology - Abstract
Macrophages are classified upon activation as classical activated M1 and M2 anti-inflammatory regulatory populations. This macrophage polarization is well characterized in humans and mice, but M1/M2 profile in cattle has been far less explored.Bos primigeniustaurus (taurine) andBos primigenius indicus(indicine) cattle display contrasting levels of resistance to infection and parasitic diseases such as C57BL/6J and Balb/c murine experimental models of parasite infection outcomes based on genetic background. Thus, we investigated the differential gene expression profile of unstimulated and LPS stimulated monocyte-derived macrophages (MDMs) from Holstein (taurine) and Gir (indicine) breeds using RNA sequencing methodology. For unstimulated MDMs, the contrast between Holstein and Gir breeds identified 163 Differentially Expressed Genes (DEGs) highlighting the higher expression of C-C chemokine receptor type five(CCR5) andBOLA-DQgenes in Gir animals. LPS-stimulated MDMs from Gir and Holstein animals displayed 1,257 DEGs enriched for cell adhesion and inflammatory responses. Gir MDMs cells displayed a higher expression of M1 related genes likeNitric Oxide Synthase 2(NOS2),Toll like receptor 4(TLR4),Nuclear factor NF-kappa-B 2(NFKB2) in addition to higher levels of transcripts for proinflammatory cytokines, chemokines, complement factors and the acute phase protein Serum Amyloid A (SAA). We also showed that gene expression of inflammatory M1 population markers, complement and SAA genes was higher in Gir in buffy coat peripheral cells in addition to nitric oxide concentration in MDMs supernatant and animal serum. Co-expression analyses revealed that Holstein and Gir animals showed different transcriptional signatures in the MDMs response to LPS that impact on cell cycle regulation, leukocyte migration and extracellular matrix organization biological processes. Overall, the results suggest that Gir animals show a natural propensity to generate a more pronounced M1 inflammatory response than Holstein, which might account for a faster immune response favouring resistance to many infection diseases.
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- 2020
7. Hidden fungal diversity from the Neotropics: Geastrum hirsutum, G. schweinitzii (Basidiomycota, Geastrales) and their allies
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Julieth O. Sousa, Monique Gardes, Christophe Lécuru, Pierre-Arthur Moreau, Bianca Denise Barbosa da Silva, María P. Martín, Mélanie Roy, Iuri Goulart Baseia, Thiago Accioly, Universidade Federal do Rio Grande do Norte [Natal] (UFRN), Impact de l'environnement chimique sur la santé humaine - ULR 4483 (IMPECS), Université de Lille-Centre Hospitalier Régional Universitaire [Lille] (CHRU Lille), Université de Lille, Droit et Santé, Université Fédérale de Bahia (UFBA), Evolution et Diversité Biologique (EDB), Institut de Recherche pour le Développement (IRD)-Université Toulouse III - Paul Sabatier (UT3), Université de Toulouse (UT)-Université de Toulouse (UT)-Centre National de la Recherche Scientifique (CNRS), Real Jardín Botánico de Madrid (RJB), Spanish National Research Council (CSIC), Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (Brasil), Conselho Nacional de Desenvolvimento Científico e Tecnológico (Brasil), Agence Nationale de la Recherche (France), Office National des Forêts (France), Direction de l'Environnement, de l'Aménagement et du Logement de la Martinique, Accioly, Thiago, Martín, María P., IMT Lille Douai, Institut Catholique Lille, Univ. Artois, Université de Lille, IMPact de l'Environnement Chimique sur la Santé humaine (IMPECS) - EA 4483, Universidade Federal do Rio Grande do Norte [Natal] [UFRN], Université Fédérale de Bahia [UFBA], Evolution et Diversité Biologique [EDB], Real Jardín Botánico de Madrid [RJB], Accioly, Thiago [0000-0002-5880-9174], and Martín, María P. [0000-0002-1235-4418]
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0106 biological sciences ,Topography ,Species Delimitation ,Light ,Speciation ,Forests ,[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics, Phylogenetics and taxonomy ,01 natural sciences ,DNA barcoding ,030308 mycology & parasitology ,Medicine and Health Sciences ,DNA, Fungal ,Phylogeny ,[SDV.MP.MYC]Life Sciences [q-bio]/Microbiology and Parasitology/Mycology ,Data Management ,Islands ,0303 health sciences ,Multidisciplinary ,Ecology ,Phylogenetic tree ,biology ,Physics ,Electromagnetic Radiation ,Fungal genetics ,Phylogenetic Analysis ,Terrestrial Environments ,Phylogenetics ,Phylogeography ,Physical Sciences ,Medicine ,Taxonomy (biology) ,Warts ,Geastrum ,Research Article ,Computer and Information Sciences ,Evolutionary Processes ,Forest Ecology ,Science ,Dermatology ,010603 evolutionary biology ,Ecosystems ,Geastrales ,03 medical and health sciences ,Species Specificity ,Cryptic Speciation ,Botany ,DNA Barcoding, Taxonomic ,Evolutionary Systematics ,Taxonomy ,Tropical Climate ,Landforms ,Evolutionary Biology ,Basidiomycota ,Ecology and Environmental Sciences ,Genetic Variation ,Biology and Life Sciences ,Geomorphology ,15. Life on land ,biology.organism_classification ,Earth Sciences ,Americas - Abstract
Taxonomy of Geastrum species in the neotropics has been subject to divergent opinions among specialists. In our study, type collections were reassessed and compared with recent collections in order to delimit species in Geastrum, sect. Myceliostroma, subsect. Epigaea. A thorough review of morphologic features combined with barcode and phylogenetic analyses (ITS and LSU nrDNA) revealed six new species (G. neoamericanum, G. rubellum, G. brunneocapillatum, G. baculicrystallum, G. rubropusillum and G. courtecuissei). In additon, the presence of hairs on the exoperidium, a commonly used feature to diagnose Geastrum species, proved to be ineffective because it is a derived character within subsect. Epigaea., This work was supported by: (TA and JS) Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES—Brazil) for the PhD scholarships awarded to Thiago Accioly and Julieth Sousa (PDSE-2017); (IGB and MPM) Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq—Brazil, Projeto Pesquisador Visitante Especial PVE/407474/2013–7, María P. Martín and Iuri G. Baseia); (PAM, MR and MG) The French Laboratories of Excellence Labex TULIP (ANR-10-LABX-41; ANR-11-IDEX-0002-02) and Labex CEBA (ANR-10-LABX-25-01), the National Forest Office (ONF, France), the program ANR E-TRICEL (National Research Agency, France) and the DREAL Martinique (France) provided financial support for this study.
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- 2019
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8. Exercise Training Prevents Cardiovascular Derangements Induced by Fructose Overload in Developing Rats
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Raquel Sirvente, Jonas Pereira Nunes, Susana Llesuy, Kátia De Angelis, Vera Farah, Maikon Barbosa da Silva, Mariana Morris, Danielle da Silva Dias, Daniela Farah, Patricia Fiorino, Maria Claudia Irigoyen, and Michelle Sartori
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Male ,ESTRES OXIDATIVO ,lcsh:Medicine ,Hemodynamics ,Blood Pressure ,030204 cardiovascular system & hematology ,Protein oxidation ,Fructoses ,Cardiovascular System ,Vascular Medicine ,Biochemistry ,Antioxidants ,purl.org/becyt/ford/1 [https] ,chemistry.chemical_compound ,0302 clinical medicine ,Heart Rate ,PATOLOGIA CARDIOVASCULAR ,Medicine and Health Sciences ,Medicine ,Public and Occupational Health ,lcsh:Science ,Multidisciplinary ,Organic Compounds ,Monosaccharides ,Hematology ,Glutathione ,Sports Science ,Chemistry ,Physical Sciences ,CIENCIAS NATURALES Y EXACTAS ,Research Article ,Cardiac function curve ,medicine.medical_specialty ,Otras Ciencias Biológicas ,Carbohydrates ,030209 endocrinology & metabolism ,Fructose ,Ciencias Biológicas ,03 medical and health sciences ,Internal medicine ,Physical Conditioning, Animal ,Heart rate ,Aerobic exercise ,Animals ,Rats, Wistar ,Sports and Exercise Medicine ,purl.org/becyt/ford/1.6 [https] ,Exercise ,Nutrition ,SOBREDOSIS DE FRUCTOSA ,business.industry ,lcsh:R ,Organic Chemistry ,Chemical Compounds ,Biology and Life Sciences ,Physical Activity ,Cell Biology ,medicine.disease ,Rats ,Diet ,Oxidative Stress ,Blood pressure ,Endocrinology ,chemistry ,Physical Fitness ,lcsh:Q ,Metabolic syndrome ,business ,Peptides - Abstract
The risks of chronic diseases associated with the increasing consumption of fructose-laden foods are amplified by the lack of regular physical activity and have become a serious public health issue worldwide. Moreover, childhood eating habits are strongly related to metabolic syndrome in adults. Thus, we aimed to investigate the preventive role of exercise training undertaken concurrently with a high fructose diet on cardiac function, hemodynamics, cardiovascular autonomic modulation and oxidative stress in male rats after weaning. Male Wistar rats were divided into 4 groups (n = 8/group): Sedentary control (SC), Trained control (TC), Sedentary Fructose (SF) and Trained Fructose (TF). Training was performed on a treadmill (8 weeks, 40-60% of maximum exercise test). Evaluations of cardiac function, hemodynamics, cardiovascular autonomic modulation and oxidative stress in plasma and in left ventricle (LV) were performed. Chronic fructose overload induced glucose intolerance and an increase in white adipose tissue (WAT) weight, in myocardial performance index (MPI) (SF:0.42±0.04 vs. SC:0.24±0.05) and in arterial pressure (SF:122±3 vs. SC:113±1 mmHg) associated with increased cardiac and vascular sympathetic modulation. Fructose also induced unfavorable changes in oxidative stress profile (plasmatic protein oxidation- SF:3.30±0.09 vs. SC:1.45±0.08 nmol/mg prot; and LV total antioxidant capacity (TRAP)-SF: 2.5±0.5 vs. SC:12.7±1.7 uM trolox). The TF group showed reduced WAT, glucose intolerance, MPI (0.35±0.04), arterial pressure (118±2mmHg), sympathetic modulation, plasmatic protein oxidation and increased TRAP when compared to SF group. Therefore, our findings indicate that cardiometabolic dysfunctions induced by fructose overload early in life may be prevented by moderate aerobic exercise training. Fil: Farah, Daniela. Universidade Presbiteriana Mackenzie; Brasil. Hospital Das Clinicas. Instituto Do Coracao; Brasil Fil: Nunes, Jonas. Universidade Presbiteriana Mackenzie; Brasil Fil: Sartori, Michelle. Universidade Nove de Julho; Brasil. Hospital Das Clinicas. Instituto Do Coracao; Brasil Fil: Da Silva Dias, Danielle. Universidade Nove de Julho; Brasil Fil: Sirvente, Raquel. Hospital Das Clinicas. Instituto Do Coracao; Brasil Fil: Silva, Maikon B.. Hospital Das Clinicas. Instituto Do Coracao; Brasil Fil: Fiorino, Patrícia. Universidade Presbiteriana Mackenzie; Brasil Fil: Morris, Mariana. Nova Southeastern University; Estados Unidos Fil: Llesuy, Susana Francisca. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Houssay. Instituto de Bioquímica y Medicina Molecular. Universidad de Buenos Aires. Facultad Medicina. Instituto de Bioquímica y Medicina Molecular; Argentina Fil: Farah, Vera. Universidade Presbiteriana Mackenzie; Brasil Fil: Irigoyen, Maria Cláudia. Hospital Das Clinicas. Instituto Do Coracao; Brasil Fil: De Angelis, Kátia. Universidade Nove de Julho; Brasil
- Published
- 2016
9. Study on the introgression of beef breeds in Canchim cattle using single nucleotide polymorphism markers
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Luciana Correia de Almeida Regitano, Changxi Li, Flavio S Schenkel, D.J.A. Santos, Priscila Arrigucci Bernardes, T.C.S. Chud, Maur�cio Mello De Alencar, Ricardo Vieira Ventura, Marcos Vinícius Gualberto Barbosa da Silva, Ricardo Zanella, Maurício A. Mudadu, Marcos Eli Buzanskas, Dan�sio Prado Munari, Universidade Estadual Paulista (Unesp), Beef Improvement Opportunities (BIO), Universidade de São Paulo (USP), Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA), Universidade de Passo Fundo, University of Alberta, Agriculture and Agri-Food Canada, Centre for Genetic Improvement of Livestock (CGIL), Marcos Eli Buzanskas, Unesp, Ricardo Vieira Ventura, USP, Tatiane Cristina Seleguim Chud, Unesp, Priscila Arrigucci Bernardes, Unesp, Daniel Jordan de Abreu Santos, Unesp, LUCIANA CORREIA DE ALMEIDA REGITANO, CPPSE, MAURICIO MELLO DE ALENCAR, CPPSE, MAURICIO DE ALVARENGA MUDADU, CNPTIA, Ricardo Zanella, UPF, MARCOS VINICIUS GUALBERTO B SILVA, CNPGL, Changxi Li, University of Alberta, Flavio Schramm Schenke, University of Guelph, and Danísio Prado Munari, Unesp.
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0301 basic medicine ,Male ,Linkage disequilibrium ,Heredity ,Heterosis ,Introgression ,lcsh:Medicine ,Breeding ,Linkage Disequilibrium ,polymorphism ,beef cattle ,Mathematical and Statistical Techniques ,lcsh:Science ,Genetics ,Mammals ,Principal Component Analysis ,Multidisciplinary ,Heterozygosity ,Agriculture ,Ruminants ,Zebu ,Breed ,Genetic Mapping ,Vertebrates ,Physical Sciences ,Body Composition ,Female ,Statistics (Mathematics) ,Research Article ,Evolutionary Processes ,Livestock ,Single-nucleotide polymorphism ,Variant Genotypes ,Biology ,Research and Analysis Methods ,Polymorphism, Single Nucleotide ,03 medical and health sciences ,Quantitative Trait, Heritable ,Bovines ,Genetic model ,Hybrid Vigor ,Animals ,Statistical Methods ,Genetic Association Studies ,Evolutionary Biology ,Population Biology ,lcsh:R ,Organisms ,Biology and Life Sciences ,Red Meat ,Canchim cattle ,030104 developmental biology ,Amniotes ,Multivariate Analysis ,Hybridization, Genetic ,lcsh:Q ,Cattle ,Purebred ,Zebus ,Mathematics ,Population Genetics - Abstract
Made available in DSpace on 2018-12-11T17:31:25Z (GMT). No. of bitstreams: 0 Previous issue date: 2017-02-01 Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES) Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq) The aim of this study was to evaluate the level of introgression of breeds in the Canchim (CA: 62.5% Charolais-37.5% Zebu) and MA genetic group (MA: 65.6% Charolais-34.4% Zebu) cattle using genomic information on Charolais (CH), Nelore (NE), and Indubrasil (IB) breeds. The number of animals used was 395 (CA and MA), 763 (NE), 338 (CH), and 37 (IB). The Bovine 50SNP BeadChip from Illumina panel was used to estimate the levels of introgression of breeds considering the Maximum likelihood, Bayesian, and Single Regression method. After genotype quality control, 32,308 SNPs were considered in the analysis. Furthermore, three thresholds to prune out SNPs in linkage disequilibrium higher than 0.10, 0.05, and 0.01 were considered, resulting in 15,286, 7,652, and 1,582 SNPs, respectively. For k = 2, the proportion of taurine and indicine varied from the expected proportion based on pedigree for all methods studied. For k = 3, the Regression method was able to differentiate the animals in three main clusters assigned to each purebred breed, showing more reasonable according to its biological viewpoint. Analyzing the data considering k = 2 seems to be more appropriate for Canchim-MA animals due to its biological interpretation. The usage of 32,308 SNPs in the analyses resulted in similar findings between the estimated and expected breed proportions. Using the Regression approach, a contribution of Indubrasil was observed in Canchim-MA when k = 3 was considered. Genetic parameter estimation could account for this breed composition information as a source of variation in order to improve the accuracy of genetic models. Our findings may help assemble appropriate reference populations for genomic prediction for Canchim-MA in order to improve prediction accuracy. Using the information on the level of introgression in each individual could also be useful in breeding or crossing design to improve individual heterosis in crossbred cattle. Departamento de Ci�ncias Exatas Universidade Estadual Paulista (Unesp) Faculdade de Ci�ncias Agrarias e Veterinarias Beef Improvement Opportunities (BIO) Departamento de Ci�ncias Basicas Universidade de S�o Paulo (USP) Faculdade de Zootecnia e Engenharia de Alimentos (FZEA) Departamento de Zootecnia Universidade Estadual Paulista (Unesp) Faculdade de Ci�ncias Agrarias e Veterinarias Embrapa Southeast Livestock Embrapa Agricultural Informatics Faculdade de Agronomia e Medicina Veterin�ria Universidade de Passo Fundo Embrapa Dairy Cattle Department of Agricultural Food and Nutritional Science University of Alberta Lacombe Research and Development Centre Agriculture and Agri-Food Canada, 6000 C and E Trail Department of Animal and Poultry Science University of Guelph Centre for Genetic Improvement of Livestock (CGIL) Departamento de Ci�ncias Exatas Universidade Estadual Paulista (Unesp) Faculdade de Ci�ncias Agrarias e Veterinarias Departamento de Zootecnia Universidade Estadual Paulista (Unesp) Faculdade de Ci�ncias Agrarias e Veterinarias CAPES: 02663/09-0 CNPq: 449564/2014-2
- Published
- 2016
10. Fluoride Intensifies Hypercaloric Diet-Induced ER Oxidative Stress and Alters Lipid Metabolism
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Tânia Mary Cestari, Marília Afonso Rabelo Buzalaf, Mileni da Silva Fernandes, Tamara Teodoro Araujo, Heloísa Aparecida Barbosa da Silva Pereira, Flávia Godoy Iano, Camila Peres Buzalaf, and Aline Dionizio
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Male ,0301 basic medicine ,Steatosis ,Physiology ,lcsh:Medicine ,Pathology and Laboratory Medicine ,medicine.disease_cause ,Biochemistry ,Cytopathology ,Fluorides ,chemistry.chemical_compound ,0302 clinical medicine ,Blood plasma ,Medicine and Health Sciences ,lcsh:Science ,Multidisciplinary ,ESTRESSE OXIDATIVO ,Chemistry ,Liver Diseases ,Fatty liver ,Hematology ,Endoplasmic Reticulum Stress ,Lipids ,Body Fluids ,Cholesterol ,Blood ,Liver metabolism ,Liver ,030220 oncology & carcinogenesis ,Anatomy ,Fluoride ,Research Article ,medicine.medical_specialty ,Gastroenterology and Hepatology ,Blood Plasma ,03 medical and health sciences ,Internal medicine ,medicine ,Animals ,Nutrition ,lcsh:R ,Biology and Life Sciences ,Lipid metabolism ,Cell Biology ,Lipid Metabolism ,medicine.disease ,Diet ,Rats ,Fatty Liver ,Oxidative Stress ,Metabolism ,030104 developmental biology ,Endocrinology ,Anatomical Pathology ,lcsh:Q ,Energy Intake ,Biomarkers ,Oxidative stress - Abstract
The role of fluoride (F) in oxidative stress is well reported, but its effects on the lipid metabolism has not been completely explored Background Here, we evaluated the relationship of diet and F-induced oxidative stress to lipid metabolism in the liver of rats eating normocaloric or hypercaloric diets for two time periods (20 or 60 days). Methods Seventy-two 21-day-old Wistar rats were divided into 2 groups (n = 36) based on the type of diet they were eating; each of these groups was then further divided into another two groups (n = 18) based on the time periods of either 20 or 60 days, for a total of four groups. Each of these was divided into 3 subgroups (n = 6 animals/subgroup), dependent on the dose of F administered in the drinking water (0 mg/L(control), 15 mg/L or 50 mg/L). After the experimental period, blood samples and the liver were collected. Plasma samples were analyzed for HDL, cholesterol and triglycerides. Western blots were performed to probe for GRP78, Erp29, SOD2, Apo-E and SREBP in hepatic tissues. Results As expected,the expression of target proteins involved in oxidative stress increased in the F-treated groups, especially in liver tissue obtained from animals eating a hypercaloric diet. Most changes in the lipid levels and pathological conditions were seen earlier in the time period, at day 20. The morphometric analyses showed a reduction in steatosis in groups on ahypercaloric diet and treated with 50 mg F/L compared to the control, while no changes were obtained in normocaloric-fed rats. Accordingly, plasma TG was reduced in the F-treated group. The reduced expression of Apo-E in a time- and diet-dependent pattern may account for the particular decrease in steatosis in hypercaloric-fed F-treated rats. Conclusions These results suggest that F changes liver lipid homeostasis, possibly because of the induction of oxidative stress, which seems to be higher in animals fed hypercaloric diets.
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- 2016
11. Effect of pequi (Caryocar brasiliense) and juçara (Euterpe edulis) waste extract on oxidation process stability in broiler meat treated by UV-C
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Marion Pereira da Costa, Jasmim Valéria Arcanjo Araujo, Daniel A. Moreira, Fabricio Alves Barbosa da Silva, Carlos Adam Conte-Junior, Jéssica Diogo Baltar, Bruna Leal Rodrigues, Renata Torrezan, and Beatriz da Silva Frasao
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Time Factors ,Antioxidant ,Light ,Protein Extraction ,medicine.medical_treatment ,Protein oxidation ,Biochemistry ,01 natural sciences ,Antioxidants ,chemistry.chemical_compound ,Animal Products ,Specimen Storage ,Medicine and Health Sciences ,Butylated hydroxytoluene ,Food science ,Extraction Techniques ,Principal Component Analysis ,Multidisciplinary ,biology ,Physics ,Fatty Acids ,Chemical Reactions ,food and beverages ,Agriculture ,04 agricultural and veterinary sciences ,Hydrogen-Ion Concentration ,Lipids ,040401 food science ,Chemistry ,Physical Sciences ,Medicine ,Oxidation-Reduction ,Research Article ,Ultraviolet radiation ,Meat ,Euterpe ,Ultraviolet Rays ,Science ,Research and Analysis Methods ,Caryocar brasiliense ,0404 agricultural biotechnology ,Electromagnetic radiation ,Lipid oxidation ,Oxidation ,medicine ,Animals ,Nutrition ,Euterpe edulis ,Waste Products ,Plant Extracts ,010401 analytical chemistry ,Broiler ,Biology and Life Sciences ,Proteins ,biology.organism_classification ,Diet ,0104 chemical sciences ,chemistry ,Food ,Storage and Handling ,Anthocyanin ,Ultraviolet C ,Chickens ,Ericales - Abstract
The aim of this study was to determine the potential for waste extracts from the pequi (Caryocar brasiliense) and juçara (Euterpe edulis) to reduce oxidatiove processes in antibiotic-free broiler meat. The use of natural antioxidants extracted from fruit-processing wastes has been neglected. Although these residues contain high amounts of these bioactive compounds, they are often discarded by industry. Meat samples were exposed previously submitted to UV-C radiation at 1.161 mW / cm2 for 10 minutes to accelerate the rancidity process. Pequi and juçara waste extracts were obtained by microwave-assisted extraction (MAE). A total of four conditions were tested using antibiotic-free broiler thighs and drumstick meat: BN-with no antioxidant (negative control), BP-with BHT (Butylated hydroxytoluene) (positive control), BE-with juçara extract, BC-with pequi extract. The color, pH, lipid and protein oxidation (days 0, 2, 4, 6, 8 and 10), antioxidant contents and activity (days 0 and 10), and proximal composition and fatty acid profile (day 0) were tested, followed by principal component analysis (PCA). Pequi waste extract presented the highest antioxidant content and activity. BE and BC treatments presented the highest total phenolic (TPC) and flavonoid (TFC) content, and BE presented the highest total monomeric anthocyanin content (TAC). TFC increased during storage in all treatments. The waste extracts of C. brasiliense presented the highest antioxidant activity against lipid oxidation in the antibiotic-free broiler meat. Moreover, both extracts presented high antioxidant activity against protein oxidation. Although the pequi peel extract had a better effect in terms of suppressing both types of oxidation, either this extract or the jussara waste extract could be used as a technological strategy to reduce the oxidative processes in antibiotic-free broiler meat for the poultry industry. Thus, waste extracts can be a potential technology to reduce the oxidative processes in antibiotic-free broiler meat.
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- 2018
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12. Single nucleotide variants and InDels identified from whole-genome re-sequencing of Guzerat, Gyr, Girolando and Holstein cattle breeds
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Stafuzza, Nedenia Bonvino, primary, Zerlotini, Adhemar, additional, Lobo, Francisco Pereira, additional, Yamagishi, Michel Eduardo Beleza, additional, Chud, Tatiane Cristina Seleguim, additional, Caetano, Alexandre Rodrigues, additional, Munari, Danísio Prado, additional, Garrick, Dorian J., additional, Machado, Marco Antonio, additional, Martins, Marta Fonseca, additional, Carvalho, Maria Raquel, additional, Cole, John Bruce, additional, and Barbosa da Silva, Marcos Vinicius Gualberto, additional
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- 2017
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13. Genome-wide scan of gastrointestinal nematode resistance in closed Angus population selected for minimized influence of MHC
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Eui-Soo Kim, Marcos Vinícius Gualberto Barbosa da Silva, Louis C. Gasbarre, Tad S. Sonstegard, and Curtis P. Van Tassell
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Male ,Candidate gene ,Nematoda ,Gastrointestinal Diseases ,Science ,Population ,Cattle Diseases ,Genome-wide association study ,Locus (genetics) ,Biology ,Feces ,Parasite Egg Count ,Animals ,Genetic Predisposition to Disease ,Allele ,education ,Nematode Infections ,Disease Resistance ,Genetics ,education.field_of_study ,Multidisciplinary ,Marker-assisted selection ,Genetic marker ,Medicine ,Cattle ,Female ,Biomarkers ,Genome-Wide Association Study ,Research Article - Abstract
Genetic markers associated with parasite indicator traits are ideal targets for study of marker assisted selection aimed at controlling infections that reduce herd use of anthelminthics. For this study, we collected gastrointestinal (GI) nematode fecal egg count (FEC) data from post-weaning animals of an Angus resource population challenged to a 26 week natural exposure on pasture. In all, data from 487 animals was collected over a 16 year period between 1992 and 2007, most of which were selected for a specific DRB1 allele to reduce the influence of potential allelic variant effects of the MHC locus. A genome-wide association study (GWAS) based on BovineSNP50 genotypes revealed six genomic regions located on bovine Chromosomes 3, 5, 8, 15 and 27; which were significantly associated (-log10 p=4.3) with Box-Cox transformed mean FEC (BC-MFEC). DAVID analysis of the genes within the significant genomic regions suggested a correlation between our results and annotation for genes involved in inflammatory response to infection. Furthermore, ROH and selection signature analyses provided strong evidence that the genomic regions associated BC-MFEC have not been affected by local autozygosity or recent experimental selection. These findings provide useful information for parasite resistance prediction for young grazing cattle and suggest new candidate gene targets for development of disease-modifying therapies or future studies of host response to GI parasite infection.
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- 2014
14. Proteomic analysis of liver in rats chronically exposed to fluoride
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Aline de Lima Leite, Camila Peres-Buzalaf, Heloísa Aparecida Barbosa da Silva Pereira, Marília Afonso Rabelo Buzalaf, Tania Mary Cestari, Janete Gualiume Vaz Madureira Lobo, and Senda Charone
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Apolipoprotein E ,Male ,Proteomics ,medicine.medical_specialty ,Proteome ,Drinking ,Weanling ,lcsh:Medicine ,Biology ,Fluorides ,FÍGADO (ANÁLISE) ,Apolipoproteins E ,Lipid droplet ,Internal medicine ,Heat shock protein ,medicine ,Ingestion ,Animals ,lcsh:Science ,Heat-Shock Proteins ,Multidisciplinary ,lcsh:R ,Reproducibility of Results ,Lipid metabolism ,Lipid Metabolism ,Rats ,Blot ,Endocrinology ,Liver ,Toxicity ,Immunology ,lcsh:Q ,Research Article - Abstract
Fluoride (F) is a potent anti-cariogenic element, but when ingestion is excessive, systemic toxicity may be observed. This can occur as acute or chronic responses, depending on both the amount of F and the time of exposure. The present study identified the profile of protein expression possibly associated with F-induced chronic hepatotoxicity. Weanling male Wistar rats (three-weeks old) were divided into three groups and treated with drinking water containing 0, 5 or 50 mg/L F for 60 days (n=6/group). At this time point, serum and livers were collected for F analysis, which was done using the ion-sensitive electrode, after hexamethyldisiloxane-facilitated diffusion. Livers were also submitted to histological and proteomic analyses (2D-PAGE followed by LC-MS/MS). Western blotting was done for confirmation of the proteomic data A dose-response was observed in serum F levels. In the livers, F levels were significantly increased in the 50 mg/L F group compared to groups treated with 0 and 5 mg/L F. Liver morphometric analysis did not reveal alterations in the cellular structures and lipid droplets were present in all groups. Proteomic quantitative intensity analysis detected 33, 44, and 29 spots differentially expressed in the comparisons between control vs. 5 mg/L F, control vs. 50 mg/L F, and 5 mg/L vs. 50 mg/L F, respectively. From these, 92 proteins were successfully identified. In addition, 18, 1, and 5 protein spots were shown to be exclusive in control, 5, and 50 mg/L F, respectively. Most of proteins were related to metabolic process and pronounced alterations were seen for the high-F level group. In F-treated rats, changes in the apolipoprotein E (ApoE) and GRP-78 expression may account for the F-induced toxicity in the liver. This can contribute to understanding the molecular mechanisms underlying hepatoxicity induced by F, by indicating key-proteins that should be better addressed in future studies.
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- 2013
15. Correction: Proteomic Analysis of Liver in Rats Chronically Exposed to Fluoride
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Senda Charone, Aline de Lima Leite, Tania Mary Cestari, Camila Peres-Buzalaf, Heloísa Aparecida Barbosa da Silva Pereira, Marília Afonso Rabelo Buzalaf, and Janete Gualiume Vaz Madureira Lobo
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Multidisciplinary ,business.industry ,Science ,lcsh:R ,Correction ,lcsh:Medicine ,computer.software_genre ,Bioinformatics ,chemistry.chemical_compound ,chemistry ,Medicine ,lcsh:Q ,Artificial intelligence ,lcsh:Science ,business ,computer ,Fluoride ,Natural language processing - Abstract
Due to issues in the typesetting process, there were errors in Figures 3,4, and 6. Correct versions of these Figures are available below. Figure 3: Figure 4: Figure 6
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- 2013
16. Weight cycling enhances adipose tissue inflammatory responses in male mice
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Carlos Alberto Mandarim-de-Lacerda, Julio C. Fraulob-Aquino, Jessica Rodrigues Lopes, Sandra Barbosa-da-Silva, and Marcia Barbosa Aguila
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Male ,medicine.medical_specialty ,Anatomy and Physiology ,Panniculitis ,Mouse ,Immunology ,Adipokine ,Adipose tissue ,lcsh:Medicine ,Inflammation ,Weight Gain ,Mice ,Model Organisms ,Adipokines ,Weight loss ,Internal medicine ,Immune Physiology ,Weight Loss ,medicine ,Animals ,Obesity ,lcsh:Science ,Biology ,Nutrition ,Multidisciplinary ,business.industry ,Leptin ,lcsh:R ,Immunity ,Animal Models ,Glucose Tolerance Test ,medicine.disease ,Lipids ,Endocrinology ,Adipose Tissue ,Immune System ,Cytokines ,Medicine ,Carbohydrate Metabolism ,Resistin ,Clinical Immunology ,lcsh:Q ,medicine.symptom ,business ,Weight gain ,Dyslipidemia ,Research Article - Abstract
BACKGROUND: Obesity is associated with low-grade chronic inflammation attributed to dysregulated production, release of cytokines and adipokines and to dysregulated glucose-insulin homeostasis and dyslipidemia. Nutritional interventions such as dieting are often accompanied by repeated bouts of weight loss and regain, a phenomenon known as weight cycling (WC). METHODS: In this work we studied the effects of WC on the feed efficiency, blood lipids, carbohydrate metabolism, adiposity and inflammatory markers in C57BL/6 male mice that WC two or three consecutive times by alternation of a high-fat (HF) diet with standard chow (SC). RESULTS: The body mass (BM) grew up in each cycle of HF feeding, and decreased after each cycle of SC feeding. The alterations observed in the animals feeding HF diet in the oral glucose tolerance test, in blood lipids, and in serum and adipose tissue expression of adipokines were not recuperated after WC. Moreover, the longer the HF feeding was (two, four and six months), more severe the adiposity was. After three consecutive WC, less marked was the BM reduction during SC feeding, while more severe was the BM increase during HF feeding. CONCLUSION: In conclusion, the results of the present study showed that both the HF diet and WC are relevant to BM evolution and fat pad remodeling in mice, with repercussion in blood lipids, homeostasis of glucose-insulin and adipokine levels. The simple reduction of the BM during a WC is not able to recover the high levels of adipokines in the serum and adipose tissue as well as the pro-inflammatory cytokines enhanced during a cycle of HF diet. These findings are significant because a milieu with altered adipokines in association with WC potentially aggravates the chronic inflammation attributed to dysregulated production and release of adipokines in mice.
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- 2012
17. Proteomic Analysis of Gastrocnemius Muscle in Rats with Streptozotocin-Induced Diabetes and Chronically Exposed to Fluoride
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Lima Leite, Aline, primary, Gualiume Vaz Madureira Lobo, Janete, additional, Barbosa da Silva Pereira, Heloísa Aparecida, additional, Silva Fernandes, Mileni, additional, Martini, Tatiani, additional, Zucki, Fernanda, additional, Sumida, Dóris Hissako, additional, Rigalli, Alfredo, additional, and Buzalaf, Marília Afonso Rabelo, additional
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- 2014
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18. Proteomic Analysis of Gastrocnemius Muscle in Rats with Streptozotocin-Induced Diabetes and Chronically Exposed to Fluoride
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Mileni da Silva Fernandes, Alfredo Rigalli, Tatiani Martini, Janete Gualiume Vaz Madureira Lobo, Heloísa Aparecida Barbosa da Silva Pereira, Marília Afonso Rabelo Buzalaf, Aline de Lima Leite, Fernanda Zucki, Doris Hissako Sumida, Universidade de São Paulo (USP), Universidade Federal de São Carlos (UFSCar), Universidade Estadual Paulista (Unesp), and Rosario Natl Univ
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Male ,Proteomics ,medicine.medical_treatment ,lcsh:Medicine ,FLUORIDE ,Biochemistry ,Fluorides ,Glucose homeostasis ,Protein Interaction Maps ,PROTEÍNAS MUSCULARES ,lcsh:Science ,Protein Metabolism ,Multidisciplinary ,purl.org/becyt/ford/3.1 [https] ,Bioquímica y Biología Molecular ,INSULIN ,Medicina Básica ,Carbohydrate Metabolism ,PROTEOMICS ,purl.org/becyt/ford/3 [https] ,medicine.symptom ,Research Article ,INSULIN RESISTANCE ,Muscle contraction ,medicine.drug ,medicine.medical_specialty ,CIENCIAS MÉDICAS Y DE LA SALUD ,Biology ,Diabetes Mellitus, Experimental ,Gastrocnemius muscle ,Insulin resistance ,Internal medicine ,parasitic diseases ,medicine ,Animals ,Rats, Wistar ,Muscle, Skeletal ,Protein Interactions ,Dose-Response Relationship, Drug ,Drinking Water ,Insulin ,lcsh:R ,Biology and Life Sciences ,Proteins ,Molecular Sequence Annotation ,medicine.disease ,Streptozotocin ,Rats ,Gene Ontology ,Metabolism ,Endocrinology ,Gluconeogenesis ,biology.protein ,lcsh:Q ,GLUT4 - Abstract
Administration of high doses of fluoride (F) can alter glucose homeostasis and lead to insulin resistance (IR). This study determined the profile of protein expression in the gastrocnemius muscle of rats with streptozotocin- induced diabetes that were chronically exposed to F. Male Wistar rats (60 days old) were randomly distributed into two groups of 18 animals. In one group, diabetes was induced through the administration of streptozotocin. Each group (D-diabetic and ND-non-diabetic) was further divided into 3 subgroups each of which was exposed to a different F concentration via drinking water (0 ppm, 10 ppm or 50 ppm F, as NaF). After 22 days of treatment, the gastrocnemius muscle was collected and submitted to proteomic analysis (2D-PAGE followed by LC-MS/MS). Protein functions were classified by the GO biological process (ClueGO v2.0.7+Clupedia v1.0.8) and protein-protein interaction networks were constructed (PSICQUIC, Cytoscape). Quantitative intensity analysis of the proteomic data revealed differential expression of 75 spots for ND0 vs. D0, 76 for ND10 vs. D10, 58 spots for ND50 vs. D50, 52 spots for D0 vs. D10 and 38 spots for D0 vs. D50. The GO annotations with the most significant terms in the comparisons of ND0 vs. D0, ND10 vs. D10, ND50 vs. D50, D0 vs. D10 and D0 vs. D50, were muscle contraction, carbohydrate catabolic processes, generation of precursor metabolites and energy, NAD metabolic processes and gluconeogenesis, respectively. Analysis of subnetworks revealed that, in all comparisons, proteins with fold changes interacted with GLUT4. GLUT4 interacting proteins, such as MDH and the stress proteins HSPB8 and GRP78, exhibited decreased expression when D animals were exposed to F. The presence of the two stress proteins indicates an increase in IR, which might worsen diabetes. Future studies should evaluate whether diabetic animals treated with F have increased IR, as well as which molecular mechanisms are involved. Fil: Lima Leite, Aline. Universidade Federal do São Carlos; Brasil. Universidade de Sao Paulo; Brasil Fil: Lobo, Janete Gualiume Vaz Madureira. Universidade de Sao Paulo; Brasil Fil: Pereira, Heloísa Aparecida Barbosa Da Silva. Universidade Federal do São Carlos; Brasil Fil: Fernandes, Mileni Silva. Universidade Federal do São Carlos; Brasil Fil: Martini, Tatiani. Universidade de Sao Paulo; Brasil Fil: Zucki, Fernanda. Universidade de Sao Paulo; Brasil Fil: Hissako Sumida, Dóris. Universidade Estadual Paulista Julio de Mesquita Filho; Brasil Fil: Rigalli, Alfredo. Universidad Nacional de Rosario; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario; Argentina Fil: Rabelo Buzalaf, Marilia Afonso. Universidade de Sao Paulo; Brasil
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- 2014
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19. Correction: Proteomic Analysis of Liver in Rats Chronically Exposed to Fluoride
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Pereira, HeloÃsa Aparecida Barbosa da Silva, primary, Leite, Aline de Lima, additional, Charone, Senda, additional, Lobo, Janete Gualiume Vaz Madureira, additional, Cestari, Tania Mary, additional, Peres-Buzalaf, Camila, additional, and Buzalaf, MarÃlia Afonso Rabelo, additional
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- 2013
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20. Proteomic Analysis of Liver in Rats Chronically Exposed to Fluoride
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Pereira, Heloísa Aparecida Barbosa da Silva, primary, Leite, Aline de Lima, additional, Charone, Senda, additional, Lobo, Janete Gualiume Vaz Madureira, additional, Cestari, Tania Mary, additional, Peres-Buzalaf, Camila, additional, and Buzalaf, Marília Afonso Rabelo, additional
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- 2013
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21. Weight Cycling Enhances Adipose Tissue Inflammatory Responses in Male Mice
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Barbosa-da-Silva, Sandra, primary, Fraulob-Aquino, Julio C., additional, Lopes, Jessica R., additional, Mandarim-de-Lacerda, Carlos A., additional, and Aguila, Marcia B., additional
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- 2012
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22. Diversity of Neotropical stalked-puffball: Two new species of Tulostoma with reticulated spores
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Tiara Sousa Cabral, Bianca Denise Barbosa da Silva, Ruby Vargas-Isla, Jadson José Souza de Oliveira, Jorge Alves da Silva Ferreira, Laís Castro, María Paz Martín, and Noemia Kazue Ishikawa
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Medicine ,Science - Published
- 2023
23. Temporal assessment of entomological surveillance of Trypanosoma cruzi vectors in an endemic area of northeastern Brazil.
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George Harisson Felinto Sampaio, Andressa Noronha Barbosa da Silva, Christiane Carlos Araújo de Negreiros, Nathan Ravi Medeiros Honorato, Rand Randall Martins, Lúcia Maria Abrantes Aguiar, Letícia Mikardya Lima Sales, Carlos Ramon do Nascimento Brito, Paulo Marcos da Matta Guedes, Antonia Claudia Jácome da Câmara, and Lúcia Maria da Cunha Galvão
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Medicine ,Science - Abstract
Entomological surveillance is essential for the control of triatomines and the prevention of Trypanosoma cruzi infection in humans and domestic animals. Thus, the objective of this study was to evaluate entomological indicators and triatomine control during the period from 2005 to 2015 in an endemic area in the state of Rio Grande do Norte, Brazil. This observational and retrospective study was developed based on data analysis related to active entomological surveillance activities and chemical control of infested housing units (HU) in the Agreste mesoregion of the state of Rio Grande do Norte, Brazil, in the period between 2005 to 2015. The quantitative analysis of housing units surveyed for entomological indicators was performed by linear regression of random effects (p < 0.05). The effect of the number of HU surveyed on the entomological indicators was analyzed by fitting a linear random effects regression model and an increasing intradomiciliary colonization rate was significant. In the period evaluated 92,156 housing units were investigated and the presence of triatomines was reported in 4,639 (5.0%). A total of 4,653 specimens of triatomines were captured and the species recorded were Triatoma pseudomaculata (n = 1,775), Triatoma brasiliensis (n = 1,569), Rhodnius nasutus (n = 741) and Panstrongylus lutzi (n = 568), with an index of natural infection by T. cruzi of 2.2%. Only 53.1% of the infested HU were subjected to chemical control. Moreover, there was a decrease in the total number of HU surveyed over time associated with an increase in the index of intradomiciliary colonization (p = 0.004). These data demonstrated that entomological surveillance and control of vectors in the Agreste mesoregion of the state has been discontinued, emphasizing the need for more effective public policies to effectively control the vectors, in order to avoid the exposure of humans and domestic animals to the risk of T. cruzi infection.
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- 2023
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24. Yield of soybean genotypes identified through GGE biplot and path analysis
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Welder José dos Santos Silva, Francisco de Alcântara Neto, Wahidah H. Al-Qahtani, Mohammad K. Okla, Abdulrahman Al-Hashimi, Paulo Fernando de Melo Jorge Vieira, Geraldo de Amaral Gravina, Alan Mario Zuffo, Alexson Filgueiras Dutra, Leonardo Castelo Branco Carvalho, Ricardo Silva de Sousa, Arthur Prudêncio de Araujo Pereira, Wallace de Sousa Leite, Gabriel Barbosa da Silva Júnior, Adriana Conceição da Silva, Marcos Renan Lima Leite, Renato Lustosa Sobrinho, and Hamada AbdElgawad
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Medicine ,Science - Abstract
Genotype × environment (G×E) interaction is an important source of variation in soybean yield, which can significantly influence selection in breeding programs. This study aimed to select superior soybean genotypes for performance and yield stability, from data from multi-environment trials (METs), through GGE biplot analysis that combines the main effects of the genotype (G) plus the genotype-by-environment (G×E) interaction. As well as, through path analysis, determine the direct and indirect influences of yield components on soybean grain yield, as a genotype selection strategy. Eight soybean genotypes from the breeding program of Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA) were evaluated in field trials using a randomized block experimental design, in an 8 x 8 factorial scheme with four replications in eight different environments of the Cerrado of Northeastern Brazil during two crop seasons. Phenotypic performance data were measured for the number of days to flowering (NDF), height of first pod insertion (HPI), final plant height (FPH), number of days to maturity (NDM), mass of 100 grains (M100) and grain yield (GY). The results revealed that the variance due to genotype, environment, and G×E interaction was highly significant (P < 0.001) for all traits. The ST820RR, BRS 333RR, BRS SambaíbaRR, M9144RR and M9056RR genotypes exhibited the greatest GY stability in the environments studied. However, only the BRS 333RR genotype, followed by the M9144RR, was able to combine good productive performance with high yield stability. The study also revealed that the HPI and the NDM are traits that should be prioritized in the selection of soybean genotypes due to the direct and indirect effects on the GY.
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- 2022
25. Clozapine prevented social interaction deficits and reduced c-Fos immunoreactivity expression in several brain areas of rats exposed to acute restraint stress
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Rodolpho Pereira de Oliveira, José Simões de Andrade, Marianna Spina, João Vítor Chamon, Paulo Henrique Dias Silva, Ana Keyla Werder, Daniela Ortolani, Lucas de Santana Cardoso Thomaz, Simone Romariz, Daniel Araki Ribeiro, Beatriz Monteiro Longo, Regina Célia Spadari, Milena de Barros Viana, Liana Melo-Thomas, Isabel Cristina Céspedes, and Regina Cláudia Barbosa da Silva
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Medicine ,Science - Abstract
In the present study, we evaluate the effect of acute restraint stress (15 min) of male Wistar rats on social interaction measurements and c-Fos immunoreactivity (c-Fos-ir) expression, a marker of neuronal activity, in areas involved with the modulation of acute physical restraint in rats, i.e., the paraventricular nucleus of the hypothalamus (PVN), median raphe nucleus (MnR), medial prefrontal cortex (mPFC), cingulate prefrontal cortex (cPFC), nucleus accumbens (NaC), hippocampus (CA3), lateral septum (LS) and medial amygdala (MeA). We considered the hypothesis that restraint stress exposure could promote social withdrawal induced by the activation of the hypothalamic-pituitary-adrenocortical (HPA) axis, and increase c-Fos expression in these limbic forebrain areas investigated. In addition, we investigated whether pretreatment with the atypical antipsychotic clozapine (5 mg/kg; I.P.) could attenuate or block the effects of restraint on these responses. We found that restraint stress induced social withdrawal, and increased c-Fos-ir in these areas, demonstrating that a single 15 min session of physical restraint of rats effectively activated the HPA axis, representing an effective tool for the investigation of neuronal activity in brain regions sensitive to stress. Conversely, pretreatment with clozapine, prevented social withdrawal and reduced c-Fos expression. We suggest that treatment with clozapine exerted a preventive effect in the social interaction deficit, at least in part, by blocking the effect of restraint stress in brain regions that are known to regulate the HPA-axis, including the cerebral cortex, hippocampus, hypothalamus, septum and amygdala. Further experiments will be done to confirm this hypothesis.
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- 2022
26. Lipopolysaccharide triggers different transcriptional signatures in taurine and indicine cattle macrophages: Reactive oxygen species and potential outcomes to the development of immune response to infections.
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Raquel Morais de Paiva Daibert, Carlos Alberto Oliveira de Biagi Junior, Felipe de Oliveira Vieira, Marcos Vinicius Gualberto Barbosa da Silva, Eugenio Damaceno Hottz, Mariana Brandi Mendonça Pinheiro, Daniele Ribeiro de Lima Reis Faza, Hyago Passe Pereira, Marta Fonseca Martins, Humberto de Mello Brandão, Marco Antônio Machado, and Wanessa Araújo Carvalho
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Medicine ,Science - Abstract
Macrophages are classified upon activation as classical activated M1 and M2 anti-inflammatory regulatory populations. This macrophage polarization is well characterized in humans and mice, but M1/M2 profile in cattle has been far less explored. Bos primigenius taurus (taurine) and Bos primigenius indicus (indicine) cattle display contrasting levels of resistance to infection and parasitic diseases such as C57BL/6J and Balb/c murine experimental models of parasite infection outcomes based on genetic background. Thus, we investigated the differential gene expression profile of unstimulated and LPS stimulated monocyte-derived macrophages (MDMs) from Holstein (taurine) and Gir (indicine) breeds using RNA sequencing methodology. For unstimulated MDMs, the contrast between Holstein and Gir breeds identified 163 Differentially Expressed Genes (DEGs) highlighting the higher expression of C-C chemokine receptor type five (CCR5) and BOLA-DQ genes in Gir animals. LPS-stimulated MDMs from Gir and Holstein animals displayed 1,257 DEGs enriched for cell adhesion and inflammatory responses. Gir MDMs cells displayed a higher expression of M1 related genes like Nitric Oxide Synthase 2 (NOS2), Toll like receptor 4 (TLR4), Nuclear factor NF-kappa-B 2 (NFKB2) in addition to higher levels of transcripts for proinflammatory cytokines, chemokines, complement factors and the acute phase protein Serum Amyloid A (SAA). We also showed that gene expression of inflammatory M1 population markers, complement and SAA genes was higher in Gir in buffy coat peripheral cells in addition to nitric oxide concentration in MDMs supernatant and animal serum. Co-expression analyses revealed that Holstein and Gir animals showed different transcriptional signatures in the MDMs response to LPS that impact on cell cycle regulation, leukocyte migration and extracellular matrix organization biological processes. Overall, the results suggest that Gir animals show a natural propensity to generate a more pronounced M1 inflammatory response than Holstein, which might account for a faster immune response favouring resistance to many infection diseases.
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- 2020
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27. Single nucleotide variants and InDels identified from whole-genome re-sequencing of Guzerat, Gyr, Girolando and Holstein cattle breeds.
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Nedenia Bonvino Stafuzza, Adhemar Zerlotini, Francisco Pereira Lobo, Michel Eduardo Beleza Yamagishi, Tatiane Cristina Seleguim Chud, Alexandre Rodrigues Caetano, Danísio Prado Munari, Dorian J Garrick, Marco Antonio Machado, Marta Fonseca Martins, Maria Raquel Carvalho, John Bruce Cole, and Marcos Vinicius Gualberto Barbosa da Silva
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Medicine ,Science - Abstract
Whole-genome re-sequencing, alignment and annotation analyses were undertaken for 12 sires representing four important cattle breeds in Brazil: Guzerat (multi-purpose), Gyr, Girolando and Holstein (dairy production). A total of approximately 4.3 billion reads from an Illumina HiSeq 2000 sequencer generated for each animal 10.7 to 16.4-fold genome coverage. A total of 27,441,279 single nucleotide variations (SNVs) and 3,828,041 insertions/deletions (InDels) were detected in the samples, of which 2,557,670 SNVs and 883,219 InDels were novel. The submission of these genetic variants to the dbSNP database significantly increased the number of known variants, particularly for the indicine genome. The concordance rate between genotypes obtained using the Bovine HD BeadChip array and the same variants identified by sequencing was about 99.05%. The annotation of variants identified numerous non-synonymous SNVs and frameshift InDels which could affect phenotypic variation. Functional enrichment analysis was performed and revealed that variants in the olfactory transduction pathway was over represented in all four cattle breeds, while the ECM-receptor interaction pathway was over represented in Girolando and Guzerat breeds, the ABC transporters pathway was over represented only in Holstein breed, and the metabolic pathways was over represented only in Gyr breed. The genetic variants discovered here provide a rich resource to help identify potential genomic markers and their associated molecular mechanisms that impact economically important traits for Gyr, Girolando, Guzerat and Holstein breeding programs.
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- 2017
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28. Study on the introgression of beef breeds in Canchim cattle using single nucleotide polymorphism markers.
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Marcos Eli Buzanskas, Ricardo Vieira Ventura, Tatiane Cristina Seleguim Chud, Priscila Arrigucci Bernardes, Daniel Jordan de Abreu Santos, Luciana Correia de Almeida Regitano, Maurício Mello de Alencar, Maurício de Alvarenga Mudadu, Ricardo Zanella, Marcos Vinícius Gualberto Barbosa da Silva, Changxi Li, Flavio Schramm Schenkel, and Danísio Prado Munari
- Subjects
Medicine ,Science - Abstract
The aim of this study was to evaluate the level of introgression of breeds in the Canchim (CA: 62.5% Charolais-37.5% Zebu) and MA genetic group (MA: 65.6% Charolais-34.4% Zebu) cattle using genomic information on Charolais (CH), Nelore (NE), and Indubrasil (IB) breeds. The number of animals used was 395 (CA and MA), 763 (NE), 338 (CH), and 37 (IB). The Bovine50SNP BeadChip from Illumina panel was used to estimate the levels of introgression of breeds considering the Maximum likelihood, Bayesian, and Single Regression method. After genotype quality control, 32,308 SNPs were considered in the analysis. Furthermore, three thresholds to prune out SNPs in linkage disequilibrium higher than 0.10, 0.05, and 0.01 were considered, resulting in 15,286, 7,652, and 1,582 SNPs, respectively. For k = 2, the proportion of taurine and indicine varied from the expected proportion based on pedigree for all methods studied. For k = 3, the Regression method was able to differentiate the animals in three main clusters assigned to each purebred breed, showing more reasonable according to its biological viewpoint. Analyzing the data considering k = 2 seems to be more appropriate for Canchim-MA animals due to its biological interpretation. The usage of 32,308 SNPs in the analyses resulted in similar findings between the estimated and expected breed proportions. Using the Regression approach, a contribution of Indubrasil was observed in Canchim-MA when k = 3 was considered. Genetic parameter estimation could account for this breed composition information as a source of variation in order to improve the accuracy of genetic models. Our findings may help assemble appropriate reference populations for genomic prediction for Canchim-MA in order to improve prediction accuracy. Using the information on the level of introgression in each individual could also be useful in breeding or crossing design to improve individual heterosis in crossbred cattle.
- Published
- 2017
- Full Text
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29. Genome-wide association for growth traits in Canchim beef cattle.
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Marcos E Buzanskas, Daniela A Grossi, Ricardo V Ventura, Flávio S Schenkel, Mehdi Sargolzaei, Sarah L C Meirelles, Fabiana B Mokry, Roberto H Higa, Maurício A Mudadu, Marcos V G Barbosa da Silva, Simone C M Niciura, Roberto A A Torres, Maurício M Alencar, Luciana C A Regitano, and Danísio P Munari
- Subjects
Medicine ,Science - Abstract
Studies are being conducted on the applicability of genomic data to improve the accuracy of the selection process in livestock, and genome-wide association studies (GWAS) provide valuable information to enhance the understanding on the genetics of complex traits. The aim of this study was to identify genomic regions and genes that play roles in birth weight (BW), weaning weight adjusted for 210 days of age (WW), and long-yearling weight adjusted for 420 days of age (LYW) in Canchim cattle. GWAS were performed by means of the Generalized Quasi-Likelihood Score (GQLS) method using genotypes from the BovineHD BeadChip and estimated breeding values for BW, WW, and LYW. Data consisted of 285 animals from the Canchim breed and 114 from the MA genetic group (derived from crossings between Charolais sires and ½ Canchim + ½ Zebu dams). After applying a false discovery rate correction at a 10% significance level, a total of 4, 12, and 10 SNPs were significantly associated with BW, WW, and LYW, respectively. These SNPs were surveyed to their corresponding genes or to surrounding genes within a distance of 250 kb. The genes DPP6 (dipeptidyl-peptidase 6) and CLEC3B (C-type lectin domain family 3 member B) were highlighted, considering its functions on the development of the brain and skeletal system, respectively. The GQLS method identified regions on chromosome associated with birth weight, weaning weight, and long-yearling weight in Canchim and MA animals. New candidate regions for body weight traits were detected and some of them have interesting biological functions, of which most have not been previously reported. The observation of QTL reports for body weight traits, covering areas surrounding the genes (SNPs) herein identified provides more evidence for these associations. Future studies targeting these areas could provide further knowledge to uncover the genetic architecture underlying growth traits in Canchim cattle.
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- 2014
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30. Proteomic analysis of gastrocnemius muscle in rats with streptozotocin-induced diabetes and chronically exposed to fluoride.
- Author
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Aline Lima Leite, Janete Gualiume Vaz Madureira Lobo, Heloísa Aparecida Barbosa da Silva Pereira, Mileni Silva Fernandes, Tatiani Martini, Fernanda Zucki, Dóris Hissako Sumida, Alfredo Rigalli, and Marília Afonso Rabelo Buzalaf
- Subjects
Medicine ,Science - Abstract
Administration of high doses of fluoride (F) can alter glucose homeostasis and lead to insulin resistance (IR). This study determined the profile of protein expression in the gastrocnemius muscle of rats with streptozotocin-induced diabetes that were chronically exposed to F. Male Wistar rats (60 days old) were randomly distributed into two groups of 18 animals. In one group, diabetes was induced through the administration of streptozotocin. Each group (D-diabetic and ND-non-diabetic) was further divided into 3 subgroups each of which was exposed to a different F concentration via drinking water (0 ppm, 10 ppm or 50 ppm F, as NaF). After 22 days of treatment, the gastrocnemius muscle was collected and submitted to proteomic analysis (2D-PAGE followed by LC-MS/MS). Protein functions were classified by the GO biological process (ClueGO v2.0.7+Clupedia v1.0.8) and protein-protein interaction networks were constructed (PSICQUIC, Cytoscape). Quantitative intensity analysis of the proteomic data revealed differential expression of 75 spots for ND0 vs. D0, 76 for ND10 vs.D10, 58 spots for ND50 vs. D50, 52 spots for D0 vs. D10 and 38 spots for D0 vs. D50. The GO annotations with the most significant terms in the comparisons of ND0 vs. D0, ND10 vs. D10, ND50 vs. D50, D0 vs. D10 and D0 vs. D50, were muscle contraction, carbohydrate catabolic processes, generation of precursor metabolites and energy, NAD metabolic processes and gluconeogenesis, respectively. Analysis of subnetworks revealed that, in all comparisons, proteins with fold changes interacted with GLUT4. GLUT4 interacting proteins, such as MDH and the stress proteins HSPB8 and GRP78, exhibited decreased expression when D animals were exposed to F. The presence of the two stress proteins indicates an increase in IR, which might worsen diabetes. Future studies should evaluate whether diabetic animals treated with F have increased IR, as well as which molecular mechanisms are involved.
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- 2014
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31. Correction: Proteomic Analysis of Liver in Rats Chronically Exposed to Fluoride.
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Heloísa Aparecida Barbosa da Silva Pereira, Aline de Lima Leite, Senda Charone, Janete Gualiume Vaz Madureira Lobo, Tania Mary Cestari, Camila Peres-Buzalaf, and Marília Afonso Rabelo Buzalaf
- Subjects
Medicine ,Science - Published
- 2013
- Full Text
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32. Proteomic analysis of liver in rats chronically exposed to fluoride.
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Heloísa Aparecida Barbosa da Silva Pereira, Aline de Lima Leite, Senda Charone, Janete Gualiume Vaz Madureira Lobo, Tania Mary Cestari, Camila Peres-Buzalaf, and Marília Afonso Rabelo Buzalaf
- Subjects
Medicine ,Science - Abstract
Fluoride (F) is a potent anti-cariogenic element, but when ingestion is excessive, systemic toxicity may be observed. This can occur as acute or chronic responses, depending on both the amount of F and the time of exposure. The present study identified the profile of protein expression possibly associated with F-induced chronic hepatotoxicity. Weanling male Wistar rats (three-weeks old) were divided into three groups and treated with drinking water containing 0, 5 or 50 mg/L F for 60 days (n=6/group). At this time point, serum and livers were collected for F analysis, which was done using the ion-sensitive electrode, after hexamethyldisiloxane-facilitated diffusion. Livers were also submitted to histological and proteomic analyses (2D-PAGE followed by LC-MS/MS). Western blotting was done for confirmation of the proteomic data A dose-response was observed in serum F levels. In the livers, F levels were significantly increased in the 50 mg/L F group compared to groups treated with 0 and 5 mg/L F. Liver morphometric analysis did not reveal alterations in the cellular structures and lipid droplets were present in all groups. Proteomic quantitative intensity analysis detected 33, 44, and 29 spots differentially expressed in the comparisons between control vs. 5 mg/L F, control vs. 50 mg/L F, and 5 mg/L vs. 50 mg/L F, respectively. From these, 92 proteins were successfully identified. In addition, 18, 1, and 5 protein spots were shown to be exclusive in control, 5, and 50 mg/L F, respectively. Most of proteins were related to metabolic process and pronounced alterations were seen for the high-F level group. In F-treated rats, changes in the apolipoprotein E (ApoE) and GRP-78 expression may account for the F-induced toxicity in the liver. This can contribute to understanding the molecular mechanisms underlying hepatoxicity induced by F, by indicating key-proteins that should be better addressed in future studies.
- Published
- 2013
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33. Weight cycling enhances adipose tissue inflammatory responses in male mice.
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Sandra Barbosa-da-Silva, Julio C Fraulob-Aquino, Jessica R Lopes, Carlos A Mandarim-de-Lacerda, and Marcia B Aguila
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Medicine ,Science - Abstract
BACKGROUND: Obesity is associated with low-grade chronic inflammation attributed to dysregulated production, release of cytokines and adipokines and to dysregulated glucose-insulin homeostasis and dyslipidemia. Nutritional interventions such as dieting are often accompanied by repeated bouts of weight loss and regain, a phenomenon known as weight cycling (WC). METHODS: In this work we studied the effects of WC on the feed efficiency, blood lipids, carbohydrate metabolism, adiposity and inflammatory markers in C57BL/6 male mice that WC two or three consecutive times by alternation of a high-fat (HF) diet with standard chow (SC). RESULTS: The body mass (BM) grew up in each cycle of HF feeding, and decreased after each cycle of SC feeding. The alterations observed in the animals feeding HF diet in the oral glucose tolerance test, in blood lipids, and in serum and adipose tissue expression of adipokines were not recuperated after WC. Moreover, the longer the HF feeding was (two, four and six months), more severe the adiposity was. After three consecutive WC, less marked was the BM reduction during SC feeding, while more severe was the BM increase during HF feeding. CONCLUSION: In conclusion, the results of the present study showed that both the HF diet and WC are relevant to BM evolution and fat pad remodeling in mice, with repercussion in blood lipids, homeostasis of glucose-insulin and adipokine levels. The simple reduction of the BM during a WC is not able to recover the high levels of adipokines in the serum and adipose tissue as well as the pro-inflammatory cytokines enhanced during a cycle of HF diet. These findings are significant because a milieu with altered adipokines in association with WC potentially aggravates the chronic inflammation attributed to dysregulated production and release of adipokines in mice.
- Published
- 2012
- Full Text
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