23 results on '"A. Gajos"'
Search Results
2. Conducting online virtual environment experiments with uncompensated, unsupervised samples
- Author
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Bernd Huber and Krzysztof Z. Gajos
- Subjects
Male ,Man-Computer Interface ,Computer science ,Social Sciences ,02 engineering and technology ,computer.software_genre ,Computer Architecture ,Mathematical and Statistical Techniques ,Learning and Memory ,Human–computer interaction ,0202 electrical engineering, electronic engineering, information engineering ,Psychology ,Child ,Multidisciplinary ,Ecology ,Negotiating ,Applied Mathematics ,Statistics ,05 social sciences ,Virtual Reality ,Middle Aged ,Physical Sciences ,Medicine ,Engineering and Technology ,Female ,Mobile device ,Spatial Navigation ,Research Article ,Adult ,Computer and Information Sciences ,Adolescent ,Ecological Metrics ,Science ,Virtual reality ,Research and Analysis Methods ,Online Systems ,Ultimatum Game ,050105 experimental psychology ,Young Adult ,Human Learning ,Game Theory ,Immersion (virtual reality) ,Humans ,Learning ,0501 psychology and cognitive sciences ,Statistical Methods ,Aged ,Behavior ,Analysis of Variance ,Computers ,Ecology and Environmental Sciences ,Cognitive Psychology ,Biology and Life Sciences ,Species Diversity ,020207 software engineering ,Nontherapeutic Human Experimentation ,Replication (computing) ,Virtual machine ,Human Factors Engineering ,Cognitive Science ,computer ,Cell Phone ,Mathematics ,User Interfaces ,Neuroscience - Abstract
Web-based experimentation with uncompensated and unsupervised samples allows for a larger and more diverse sample population, more generalizable results, and faster theory to experiment cycle. Given that participants are unsupervised, it is still unknown whether the data collected in such settings would be of sufficiently high quality to support robust conclusions. Therefore, we investigated the feasibility of conducting such experiments online using virtual environment technologies. We conducted a conceptual replication of two prior experiments that have been conducted in virtual environments. Our results replicate findings previously obtained in conventional laboratory settings. These results hold across different device types of participants (ranging from desktop, through mobile devices to immersive virtual reality headsets), suggesting that experiments can be conducted online with uncompensated samples in virtual environments.
- Published
- 2020
3. Pentoxifylline Inhibits WNT Signalling in β-Cateninhigh Patient-Derived Melanoma Cell Populations
- Author
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Marcin Talar, Malgorzata Czyz, Salem Chouaib, Anna Gajos-Michniewicz, and Beata Talar
- Subjects
0301 basic medicine ,Melanomas ,medicine.medical_treatment ,Cancer Treatment ,lcsh:Medicine ,Gene Expression ,Apoptosis ,Pentoxifylline ,0302 clinical medicine ,Spectrum Analysis Techniques ,Cancer immunotherapy ,Medicine and Health Sciences ,lcsh:Science ,Melanoma ,Wnt Signaling Pathway ,Cells, Cultured ,beta Catenin ,Cultured Tumor Cells ,Staining ,Multidisciplinary ,biology ,Cell Death ,Wnt signaling pathway ,Cell Staining ,Flow Cytometry ,Oncology ,Cell Processes ,Spectrophotometry ,030220 oncology & carcinogenesis ,Platelet aggregation inhibitor ,Melanoma Cells ,Biological Cultures ,Immunotherapy ,Cytophotometry ,medicine.drug ,Research Article ,Beta-catenin ,Immunology ,Research and Analysis Methods ,Cancer Immunotherapy ,03 medical and health sciences ,medicine ,Genetics ,Humans ,lcsh:R ,Cancers and Neoplasms ,Biology and Life Sciences ,Cell Biology ,Cell Cultures ,medicine.disease ,CTGF ,030104 developmental biology ,Specimen Preparation and Treatment ,biology.protein ,Cancer research ,lcsh:Q ,Clinical Immunology ,Clinical Medicine ,Platelet Aggregation Inhibitors - Abstract
Background The heterogeneity of melanoma needs to be addressed and combination therapies seem to be necessary to overcome intrinsic and acquired resistance to newly developed immunotherapies and targeted therapies. Although the role of WNT/β-catenin pathway in melanoma was early demonstrated, its contribution to the lack of the melanoma patient response to treatment was only recently recognized. Using patient-derived melanoma cell populations, we investigated the influence of pentoxifylline on melanoma cells with either high or low expression of β-catenin. Findings Our results indicate that pentoxifylline inhibits the activity of the canonical WNT pathway in melanoma cell populations with high basal activity of this signalling. This is supported by lowered overall activity of transcription factors TCF/LEF and reduced nuclear localisation of active β-catenin. Moreover, treatment of β-cateninhigh melanoma cell populations with pentoxifylline induces downregulation of genes that are targets of the WNT/β-catenin pathway including connective tissue growth factor (CTGF) and microphthalmia-associated transcription factor (MITF-M), a melanocyte- and melanoma cell-specific regulator. Conclusions These results suggest that pentoxifylline, a drug approved by the FDA in the treatment of peripheral arterial disease, might be tested in a subset of melanoma patients with elevated activity of β-catenin. This pharmaceutical might be tested as an adjuvant drug in combination therapies when the response to immunotherapy is prevented by high activity of the WNT/β-catenin pathway.
- Published
- 2016
4. Type of Inflammation Differentially Affects Expression of Interleukin 1β and 6, Tumor Necrosis Factor-α and Toll-Like Receptors in Subclinical Endometritis in Mares
- Author
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Marta J. Siemieniuch, Marcin Nowak, Kiyoshi Okuda, Anna Z. Szóstek, Roland Kozdrowski, and Katarzyna Gajos
- Subjects
0301 basic medicine ,Transcription, Genetic ,Physiology ,Biopsy ,animal diseases ,Interleukin-1beta ,lcsh:Medicine ,Pathology and Laboratory Medicine ,Immune Receptors ,Biochemistry ,Endometrium ,Animal Cells ,Immune Physiology ,Medicine and Health Sciences ,lcsh:Science ,Immune Response ,Toll-like Receptors ,Progesterone ,Connective Tissue Cells ,Mammals ,Innate Immune System ,Immune System Proteins ,Multidisciplinary ,Connective Tissue ,Vertebrates ,Cytokines ,Female ,Tumor necrosis factor alpha ,Biological Cultures ,Endometritis ,Anatomy ,Cellular Types ,medicine.symptom ,Research Article ,Signal Transduction ,medicine.medical_specialty ,endocrine system ,Equines ,Immunology ,Surgical and Invasive Medical Procedures ,Inflammation ,Biology ,Research and Analysis Methods ,03 medical and health sciences ,Signs and Symptoms ,Immune system ,Diagnostic Medicine ,Internal medicine ,medicine ,Animals ,Horses ,Interleukin 6 ,Tissue Cultures ,Tumor Necrosis Factor-alpha ,Uterus ,lcsh:R ,Organisms ,Reproductive System ,Biology and Life Sciences ,Proteins ,Cell Biology ,Molecular Development ,medicine.disease ,TLR2 ,Biological Tissue ,030104 developmental biology ,Endocrinology ,Immune System ,Amniotes ,biology.protein ,TLR4 ,Horse Diseases ,lcsh:Q ,Stromal Cells ,Chronic Endometritis ,Developmental Biology - Abstract
Mares that fail to conceive or lose their embryos, without showing typical signs of clinical endometritis, should be suspected of subclinical endometritis (SE). In this study, the question was addressed: does SE fully activate selected mechanisms of innate immunity in mares? For this aim, expression of mRNAs for Toll-like Receptor 2 and 4 (TLR 2/4), interleukin 1β (IL-1β), interleukin 6 (IL-6) and tumor necrosis factor α (TNF) was examined in control mares versus either mares suffering from chronic endometritis (ChE) or subacute suppurative endometritis (SSE). The concentrations of IL-1β, IL-6 and TNF-α in supernatants from endometrial tissue cultures after 4 h incubation were measured using the enzyme immunoassay (EIA) method. Eighty-two warmblood mares, of known breeding history, were enrolled in this study. Based on histopathological assessment, mares were classified as suffering from ChE, SSE or as being healthy. In addition, immuno-localization of both TLR2 and TLR4 as well as TNF-α was investigated in the equine endometria. The mRNA expression of TLR2 (P < 0.01), IL-1β (P < 0.0001), IL-6 (P < 0.0001) and TLR4 and TNF (P < 0.05) was up-regulated in endometria of mares suffering from SSE compared with unaffected mares. Concentrations of IL-6 and TNF-α were increased only in mares exhibiting SSE, compared with unaffected (P < 0.01 for both) and ChE mares (P < 0.05 for both). Immuno-localization of TNF-α and TLRs was confirmed, both in unaffected and SE-affected endometria, and was present in the luminal and glandular epithelia and stromal cells. The severity of inflammation impacts the immune response and fosters activation of innate immunity mechanisms, as observed in the endometria of mares. The intracellular localization of TLRs and TNF-α in the endometria indicates a key role of endometrial epithelial and stromal cells in the immune response and inflammation.
- Published
- 2016
5. Novel scintillating material 2-(4-styrylphenyl)benzoxazole for the fully digital and MRI compatible J-PET tomograph based on plastic scintillators
- Author
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Wieczorek, Anna, primary, Dulski, Kamil, additional, Niedźwiecki, Szymon, additional, Alfs, Dominika, additional, Białas, Piotr, additional, Curceanu, Catalina, additional, Czerwiński, Eryk, additional, Danel, Andrzej, additional, Gajos, Aleksander, additional, Głowacz, Bartosz, additional, Gorgol, Marek, additional, Hiesmayr, Beatrix, additional, Jasińska, Bożena, additional, Kacprzak, Krzysztof, additional, Kamińska, Daria, additional, Kapłon, Łukasz, additional, Kochanowski, Andrzej, additional, Korcyl, Grzegorz, additional, Kowalski, Paweł, additional, Kozik, Tomasz, additional, Krzemień, Wojciech, additional, Kubicz, Ewelina, additional, Kucharek, Mateusz, additional, Mohammed, Muhsin, additional, Pawlik-Niedźwiecka, Monika, additional, Pałka, Marek, additional, Raczyński, Lech, additional, Rudy, Zbigniew, additional, Rundel, Oleksandr, additional, Sharma, Neha G., additional, Silarski, Michał, additional, Uchacz, Tomasz, additional, Wiślicki, Wojciech, additional, Zgardzińska, Bożena, additional, Zieliński, Marcin, additional, and Moskal, Paweł, additional
- Published
- 2017
- Full Text
- View/download PDF
6. MCL-1, BCL-XL and MITF Are Diversely Employed in Adaptive Response of Melanoma Cells to Changes in Microenvironment
- Author
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Malgorzata Czyz, Mariusz L. Hartman, Anna Gajos-Michniewicz, and Beata Talar
- Subjects
Programmed cell death ,Cell Survival ,Science ,RNA Stability ,Cell ,bcl-X Protein ,Bcl-xL ,Biology ,medicine ,Tumor Microenvironment ,Humans ,Gene Silencing ,RNA, Messenger ,neoplasms ,Melanoma ,Tumor microenvironment ,Microphthalmia-Associated Transcription Factor ,Multidisciplinary ,medicine.disease ,Microphthalmia-associated transcription factor ,Gene Expression Regulation, Neoplastic ,medicine.anatomical_structure ,Apoptosis ,Cutaneous melanoma ,biology.protein ,Cancer research ,Medicine ,Myeloid Cell Leukemia Sequence 1 Protein ,Research Article ,Signal Transduction - Abstract
Melanoma cells can switch their phenotypes in response to microenvironmental insults. Heterogeneous melanoma populations characterized by long-term growth and a high self-renewal capacity can be obtained in vitro in EGF(+)bFGF(+) medium whilst invasive potential of melanoma cells is increased in serum-containing cultures. In the present study, we have shown that originally these patient-derived melanoma populations exhibit variable expression of pro-survival genes from the BCL-2 family and inhibitors of apoptosis (IAPs), and differ in the baseline MCL-1 transcript stability as well. While being transferred to serum-containing medium, melanoma cells are well protected from death. Immediate adaptive response of melanoma cells selectively involves a temporary MCL-1 increase, both at mRNA and protein levels, and BCL-XL can complement MCL-1, especially in MITFlow populations. Thus, the extent of MCL-1 and BCL-XL contributions seems to be cell context-dependent. An increase in MCL-1 level results from a transiently enhanced stability of its transcript, but not from altered protein turnover. Inhibition of MCL-1 preceding transfer to serum-containing medium caused the induction of cell death in a subset of melanoma cells, which confirms the involvement of MCL-1 in melanoma cell survival during the rapid alteration of growth conditions. Additionally, immediate response to serum involves the transient increase in MITF expression and inhibition of ERK-1/2 activity. Uncovering the mechanisms of adaptive response to rapid changes in microenvironment may extend our knowledge on melanoma biology, especially at the stage of dissemination.
- Published
- 2015
7. Screening for THAP1 Mutations in Polish Patients with Dystonia Shows Known and Novel Substitutions
- Author
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Ewa Golanska, Malgorzata Szybka, Pawel P. Liberski, Agata Gajos, Monika Sieruta, Andrzej Bogucki, Tomasz Kmiec, Stanisław Ochudło, and Monika Rudzińska
- Subjects
Proband ,Adult ,Male ,Adolescent ,Science ,DNA Mutational Analysis ,Biology ,Asymptomatic ,Cohort Studies ,Exon ,Young Adult ,Genotype ,medicine ,Humans ,Point Mutation ,Child ,Aged ,Dystonia ,Genetics ,Multidisciplinary ,Polymorphism, Genetic ,Point mutation ,Infant ,Nuclear Proteins ,Middle Aged ,medicine.disease ,PANK2 ,Phenotype ,DNA-Binding Proteins ,Child, Preschool ,Mutation ,Medicine ,Female ,Poland ,medicine.symptom ,Apoptosis Regulatory Proteins ,Research Article - Abstract
The aim of this study was to assess the presence of DYT6 mutations in Polish patients with isolated dystonia and to characterize their phenotype. We sequenced THAP1 exons 1, 2 and 3 including exon-intron boundaries and 5'UTR fragment in 96 non-DYT1 dystonia patients. In four individuals single nucleotide variations were identified. The coding substitutions were: c. 238A>G (p.Ile80Val), found in two patients, and c.167A>G (p.Glu56Gly), found in one patient. The same variations were present also in the patients' symptomatic as well as asymptomatic relatives. Mutation penetration in the analyzed families was 50-66.7%. In the fourth patient, a novel c.-249C>A substitution in the promoter region was identified. The patient, initially suspected of idiopathic isolated dystonia, finally presented with pantothenate kinase 2-associated neurodegeneration phenotype and was a carrier of two PANK2 mutations. This is the first identified NBIA1 case carrying mutations in both PANK2 and THAP1 genes. In all symptomatic THAP1 mutation carriers (four probands and their three affected relatives) the first signs of dystonia occurred before the age of 23. A primary localization typical for DYT6 dystonia was observed in six individuals. Five subjects developed the first signs of dystonia in the upper limb. In one patient the disease began from laryngeal involvement. An uncommon primary involvement of lower limb was noted in the THAP1 and PANK2 mutations carrier. Neither of these THAP1 substitutions were found in 150 unrelated healthy controls. To the contrary, we identified a heterozygous C/T genotype of c.57C>T single nucleotide variation (p.Pro19Pro, rs146087734) in one healthy control, but in none of the patients. Therefore, a previously proposed association between this substitution and DYT6 dystonia seems unlikely. We found also no significant difference between cases and controls in genotypes distribution of the two-nucleotide -237-236 GA>TT (rs370983900 & rs1844977763) polymorphism.
- Published
- 2015
8. Gene expression profiling identifies microphthalmia-associated transcription factor (MITF) and Dickkopf-1 (DKK1) as regulators of microenvironment-driven alterations in melanoma phenotype
- Author
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Muhammad Zaeem Noman, Mariusz L. Hartman, Beata Talar, Anna Gajos-Michniewicz, Salem Chouaib, and Malgorzata Czyz
- Subjects
Melanomas ,Serum ,Skin Neoplasms ,Cell Count ,RNA interference ,Cell Signaling ,Molecular Cell Biology ,Basic Cancer Research ,Medicine and Health Sciences ,Tumor Microenvironment ,Melanoma ,Wnt Signaling Pathway ,WNT Signaling Cascade ,beta Catenin ,Regulation of gene expression ,Multidisciplinary ,Microphthalmia-associated transcription factor ,Phenotype ,Signaling Cascades ,Up-Regulation ,Gene Expression Regulation, Neoplastic ,Oncology ,Intercellular Signaling Peptides and Proteins ,Medicine ,Epigenetics ,Research Article ,Signal Transduction ,Science ,DNA transcription ,Malignant Skin Neoplasms ,Dermatology ,Biology ,Cell Line, Tumor ,Spheroids, Cellular ,Genetics ,Gene silencing ,Humans ,Neoplasm Invasiveness ,MLANA ,Gene Silencing ,Cell Proliferation ,Melanins ,Tumor microenvironment ,Microphthalmia-Associated Transcription Factor ,Biology and life sciences ,Gene Expression Profiling ,Cancers and Neoplasms ,Cell Biology ,Culture Media ,Gene expression profiling ,Cancer research ,Gene expression ,BCL2-related protein A1 - Abstract
BackgroundThe diversity of functional phenotypes observed within a tumor does not exclusively result from intratumoral genetic heterogeneity but also from the response of cancer cells to the microenvironment. We have previously demonstrated that the morphological and functional phenotypes of melanoma can be dynamically altered upon external stimuli.FindingsIn the present study, transcriptome profiles were generated to explore the molecules governing phenotypes of melanospheres grown in the bFGF(+)EGF(+) serum-free cultures and monolayers maintained in the serum-containing medium. Higher expression levels of MITF-dependent genes that are responsible for differentiation, e.g., TYR and MLANA, and stemness-related genes, e.g., ALDH1A1, were detected in melanospheres. These results were supported by the observation that the melanospheres contained more pigmented cells and cells exerting the self-renewal capacity than the monolayers. In addition, the expression of the anti-apoptotic, MITF-dependent genes e.g., BCL2A1 was also higher in the melanospheres. The enhanced activity of MITF in melanospheres, as illustrated by the increased expression of 74 MITF-dependent genes, identified MITF as a central transcriptional regulator in melanospheres. Importantly, several genes including MITF-dependent ones were expressed in melanospheres and original tumors at similar levels. The reduced MITF level in monolayers might be partially explained by suppression of the Wnt/β-catenin pathway, and DKK1, a secreted inhibitor of this pathway, was highly up-regulated in monolayers in comparison to melanospheres and original tumors. Furthermore, the silencing of DKK1 in monolayers increased the percentage of cells with self-renewing capacity.ConclusionsOur study indicates that melanospheres can be used to unravel the molecular pathways that sustain intratumoral phenotypic heterogeneity. Melanospheres directly derived from tumor specimens more accurately mirrored the morphology and gene expression profiles of the original tumors compared to monolayers. Therefore, melanospheres represent a relevant preclinical tool to study new anticancer treatment strategies.
- Published
- 2014
9. Pentoxifylline Inhibits WNT Signalling in β-Cateninhigh Patient-Derived Melanoma Cell Populations
- Author
-
Talar, Beata, primary, Gajos-Michniewicz, Anna, additional, Talar, Marcin, additional, Chouaib, Salem, additional, and Czyz, Malgorzata, additional
- Published
- 2016
- Full Text
- View/download PDF
10. Type of Inflammation Differentially Affects Expression of Interleukin 1β and 6, Tumor Necrosis Factor-α and Toll-Like Receptors in Subclinical Endometritis in Mares
- Author
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Siemieniuch, Marta J., primary, Szóstek, Anna Z., additional, Gajos, Katarzyna, additional, Kozdrowski, Roland, additional, Nowak, Marcin, additional, and Okuda, Kiyoshi, additional
- Published
- 2016
- Full Text
- View/download PDF
11. Possible association between suicide committed under influence of ethanol and a variant in the AUTS2 gene
- Author
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Aleksandra Pawlak, Izabela Chojnicka, Pawe lstrok Krajewski, Grażyna Broda, Krzysztof Gajos, Marcin Fudalej, Rafał Płoski, Piotr Stawiński, Sylwia Fudalej, Marcin Wojnar, and Katarzyna Strawa
- Subjects
Male ,Gene Identification and Analysis ,lcsh:Medicine ,Poison control ,Social and Behavioral Sciences ,Suicide prevention ,0302 clinical medicine ,Gene Frequency ,Sociology ,Genotype ,lcsh:Science ,Genes, Dominant ,Genetics ,Psychiatry ,0303 health sciences ,education.field_of_study ,Multidisciplinary ,Substance Abuse ,Middle Aged ,Suicide ,Mental Health ,Cohort ,Medicine ,Female ,Research Article ,Adult ,medicine.medical_specialty ,Alcohol Drinking ,Population ,Neuropsychiatric Disorders ,Polymorphism, Single Nucleotide ,White People ,Molecular Genetics ,03 medical and health sciences ,Internal medicine ,medicine ,Humans ,Allele ,education ,Allele frequency ,Genotyping ,Biology ,Alleles ,Genetic Association Studies ,030304 developmental biology ,Ethanol ,business.industry ,lcsh:R ,Proteins ,Human Genetics ,Cytoskeletal Proteins ,Endocrinology ,Genetics of Disease ,Genetic Polymorphism ,lcsh:Q ,business ,030217 neurology & neurosurgery ,Population Genetics ,Transcription Factors - Abstract
BACKGROUND: rs6943555 in AUTS2 has been shown to modulate ethanol consumption. We hypothesized that rs6943555 might be associated with completed suicide. METHODS: We genotyped rs6943555 in 625 completed suicides and 3861 controls using real-time TaqMan Allelic Discrimination Assay. All individuals were Polish Caucasians. RESULTS: We detected an association between suicide and rs6943555 A allele (OR = 1.17, P = 0.018 for allelic comparison, OR = 1.24, P = 0.013 for dominant, and OR = 1.18, P = 0.020 for co-dominant model of inheritance). The association remained significant after adjusting for age and gender (co-dominant: P = 0.002 and dominant model: P = 0.001). After stratifying suicides according to blood ethanol concentration (BAC≤ 20 mg/dl and BAC > 20 mg/dl) the association remained significant only for cases who committed suicide under influence of alcohol (co-dominant: OR = 1.37, P = 0.004 and dominant model: OR = 1.45, P = 0.006). To validate this finding we genotyped another cohort of 132 cases. We reproduced the association between rs6943555 A allele and suicide under influence of ethanol (allelic comparison: OR = 1.55, P = 0.023; co-dominant : OR = 1.54, P = 0.031; dominant model: OR = 1.84, P = 0.015). Analyzing pooled suicides with BAC >20 mg/dl (N = 300) we found the association of rs6943555 A allele not only vs. controls (allelic OR = 1.41, P = 0.00029) but also vs. cases with BAC ≤ 20 mg/dl (N = 449, allelic OR = 1.33, P = 0.019). CONCLUSIONS: In our study rs6943555 A allele is associated with suicide committed after drinking ethanol shortly before death. The rs6943555 A allele may be linked to adverse emotional reaction to ethanol, which could explain the association with lower consumption in general population as well as the predisposition to suicide under influence of ethanol. Language: en
- Published
- 2012
12. Screening for THAP1 Mutations in Polish Patients with Dystonia Shows Known and Novel Substitutions
- Author
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Golanska, Ewa, primary, Gajos, Agata, additional, Sieruta, Monika, additional, Szybka, Malgorzata, additional, Rudzinska, Monika, additional, Ochudlo, Stanislaw, additional, Kmiec, Tomasz, additional, Liberski, Pawel P., additional, and Bogucki, Andrzej, additional
- Published
- 2015
- Full Text
- View/download PDF
13. MCL-1, BCL-XL and MITF Are Diversely Employed in Adaptive Response of Melanoma Cells to Changes in Microenvironment
- Author
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Hartman, Mariusz L., primary, Talar, Beata, additional, Gajos-Michniewicz, Anna, additional, and Czyz, Malgorzata, additional
- Published
- 2015
- Full Text
- View/download PDF
14. Gene Expression Profiling Identifies Microphthalmia-Associated Transcription Factor (MITF) and Dickkopf-1 (DKK1) as Regulators of Microenvironment-Driven Alterations in Melanoma Phenotype
- Author
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Hartman, Mariusz L., primary, Talar, Beata, additional, Noman, Muhammad Zaeem, additional, Gajos-Michniewicz, Anna, additional, Chouaib, Salem, additional, and Czyz, Malgorzata, additional
- Published
- 2014
- Full Text
- View/download PDF
15. Possible Association between Suicide Committed under Influence of Ethanol and a Variant in the AUTS2 Gene
- Author
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Chojnicka, Izabela, primary, Gajos, Krzysztof, additional, Strawa, Katarzyna, additional, Broda, Grażyna, additional, Fudalej, Sylwia, additional, Fudalej, Marcin, additional, Stawiński, Piotr, additional, Pawlak, Aleksandra, additional, Krajewski, Paweł, additional, Wojnar, Marcin, additional, and Płoski, Rafał, additional
- Published
- 2013
- Full Text
- View/download PDF
16. Pentoxifylline Inhibits WNT Signalling in β-Cateninhigh Patient-Derived Melanoma Cell Populations.
- Author
-
Talar, Beata, Gajos-Michniewicz, Anna, Talar, Marcin, Chouaib, Salem, and Czyz, Malgorzata
- Subjects
- *
PENTOXIFYLLINE , *WNT signal transduction , *CATENINS , *CANCER immunotherapy , *MELANOMA , *CANCER cells , *PATIENTS - Abstract
Background: The heterogeneity of melanoma needs to be addressed and combination therapies seem to be necessary to overcome intrinsic and acquired resistance to newly developed immunotherapies and targeted therapies. Although the role of WNT/β-catenin pathway in melanoma was early demonstrated, its contribution to the lack of the melanoma patient response to treatment was only recently recognized. Using patient-derived melanoma cell populations, we investigated the influence of pentoxifylline on melanoma cells with either high or low expression of β-catenin. Findings: Our results indicate that pentoxifylline inhibits the activity of the canonical WNT pathway in melanoma cell populations with high basal activity of this signalling. This is supported by lowered overall activity of transcription factors TCF/LEF and reduced nuclear localisation of active β-catenin. Moreover, treatment of β-cateninhigh melanoma cell populations with pentoxifylline induces downregulation of genes that are targets of the WNT/β-catenin pathway including connective tissue growth factor (CTGF) and microphthalmia-associated transcription factor (MITF-M), a melanocyte- and melanoma cell-specific regulator. Conclusions: These results suggest that pentoxifylline, a drug approved by the FDA in the treatment of peripheral arterial disease, might be tested in a subset of melanoma patients with elevated activity of β-catenin. This pharmaceutical might be tested as an adjuvant drug in combination therapies when the response to immunotherapy is prevented by high activity of the WNT/β-catenin pathway. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
17. MCL-1, BCL-XL and MITF Are Diversely Employed in Adaptive Response of Melanoma Cells to Changes in Microenvironment.
- Author
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Hartman, Mariusz L., Talar, Beata, Gajos-Michniewicz, Anna, and Czyz, Malgorzata
- Subjects
MICROPHTHALMIA-associated transcription factor ,BCL genes ,MELANOMA diagnosis ,CANCER cell physiology ,POPULATION biology ,EPIDERMAL growth factor - Abstract
Melanoma cells can switch their phenotypes in response to microenvironmental insults. Heterogeneous melanoma populations characterized by long-term growth and a high self-renewal capacity can be obtained in vitro in EGF(+)bFGF(+) medium whilst invasive potential of melanoma cells is increased in serum-containing cultures. In the present study, we have shown that originally these patient-derived melanoma populations exhibit variable expression of pro-survival genes from the BCL-2 family and inhibitors of apoptosis (IAPs), and differ in the baseline MCL-1 transcript stability as well. While being transferred to serum-containing medium, melanoma cells are well protected from death. Immediate adaptive response of melanoma cells selectively involves a temporary MCL-1 increase, both at mRNA and protein levels, and BCL-X
L can complement MCL-1, especially in MITFlow populations. Thus, the extent of MCL-1 and BCL-XL contributions seems to be cell context-dependent. An increase in MCL-1 level results from a transiently enhanced stability of its transcript, but not from altered protein turnover. Inhibition of MCL-1 preceding transfer to serum-containing medium caused the induction of cell death in a subset of melanoma cells, which confirms the involvement of MCL-1 in melanoma cell survival during the rapid alteration of growth conditions. Additionally, immediate response to serum involves the transient increase in MITF expression and inhibition of ERK-1/2 activity. Uncovering the mechanisms of adaptive response to rapid changes in microenvironment may extend our knowledge on melanoma biology, especially at the stage of dissemination. [ABSTRACT FROM AUTHOR]- Published
- 2015
- Full Text
- View/download PDF
18. Possible Association between Suicide Committed under Influence of Ethanol and a Variant in the AUTS2 Gene.
- Author
-
Chojnicka, Izabela, Gajos, Krzysztof, Strawa, Katarzyna, Broda, Grażyna, Fudalej, Sylwia, Fudalej, Marcin, Stawiński, Piotr, Pawlak, Aleksandra, Krajewski, Paweł, Wojnar, Marcin, and Płoski, Rafał
- Subjects
- *
HUMAN genetic variation , *SUICIDAL behavior , *ALCOHOL drinking , *ETHANOL , *BIOLOGICAL assay , *COMPARATIVE studies , *GENETIC polymorphisms - Abstract
Background: rs6943555 in AUTS2 has been shown to modulate ethanol consumption. We hypothesized that rs6943555 might be associated with completed suicide. Methods: We genotyped rs6943555 in 625 completed suicides and 3861 controls using real-time TaqMan Allelic Discrimination Assay. All individuals were Polish Caucasians. Results: We detected an association between suicide and rs6943555 A allele (OR = 1.17, P = 0.018 for allelic comparison, OR = 1.24, P = 0.013 for dominant, and OR = 1.18, P = 0.020 for co-dominant model of inheritance). The association remained significant after adjusting for age and gender (co-dominant: P = 0.002 and dominant model: P = 0.001). After stratifying suicides according to blood ethanol concentration (BAC≤ 20 mg/dl and BAC > 20 mg/dl) the association remained significant only for cases who committed suicide under influence of alcohol (co-dominant: OR = 1.37, P = 0.004 and dominant model: OR = 1.45, P = 0.006). To validate this finding we genotyped another cohort of 132 cases. We reproduced the association between rs6943555 A allele and suicide under influence of ethanol (allelic comparison: OR = 1.55, P = 0.023; co-dominant : OR = 1.54, P = 0.031; dominant model: OR = 1.84, P = 0.015). Analyzing pooled suicides with BAC >20 mg/dl (N = 300) we found the association of rs6943555 A allele not only vs. controls (allelic OR = 1.41, P = 0.00029) but also vs. cases with BAC ≤ 20 mg/dl (N = 449, allelic OR = 1.33, P = 0.019). Conclusions: In our study rs6943555 A allele is associated with suicide committed after drinking ethanol shortly before death. The rs6943555 A allele may be linked to adverse emotional reaction to ethanol, which could explain the association with lower consumption in general population as well as the predisposition to suicide under influence of ethanol. [ABSTRACT FROM AUTHOR]
- Published
- 2013
- Full Text
- View/download PDF
19. Novel scintillating material 2-(4-styrylphenyl)benzoxazole for the fully digital and MRI compatible J-PET tomograph based on plastic scintillators.
- Author
-
Anna Wieczorek, Kamil Dulski, Szymon Niedźwiecki, Dominika Alfs, Piotr Białas, Catalina Curceanu, Eryk Czerwiński, Andrzej Danel, Aleksander Gajos, Bartosz Głowacz, Marek Gorgol, Beatrix Hiesmayr, Bożena Jasińska, Krzysztof Kacprzak, Daria Kamińska, Łukasz Kapłon, Andrzej Kochanowski, Grzegorz Korcyl, Paweł Kowalski, Tomasz Kozik, Wojciech Krzemień, Ewelina Kubicz, Mateusz Kucharek, Muhsin Mohammed, Monika Pawlik-Niedźwiecka, Marek Pałka, Lech Raczyński, Zbigniew Rudy, Oleksandr Rundel, Neha G Sharma, Michał Silarski, Tomasz Uchacz, Wojciech Wiślicki, Bożena Zgardzińska, Marcin Zieliński, and Paweł Moskal
- Subjects
Medicine ,Science - Abstract
A novel plastic scintillator is developed for the application in the digital positron emission tomography (PET). The novelty of the concept lies in application of the 2-(4-styrylphenyl)benzoxazole as a wavelength shifter. The substance has not been used as scintillator dopant before. A dopant shifts the scintillation spectrum towards longer wavelengths making it more suitable for applications in scintillators of long strips geometry and light detection with digital silicon photomultipliers. These features open perspectives for the construction of the cost-effective and MRI-compatible PET scanner with the large field of view. In this article we present the synthesis method and characterize performance of the elaborated scintillator by determining its light emission spectrum, light emission efficiency, rising and decay time of the scintillation pulses and resulting timing resolution when applied in the positron emission tomography. The optimal concentration of the novel wavelength shifter was established by maximizing the light output and it was found to be 0.05 ‰ for cuboidal scintillator with dimensions of 14 mm x 14 mm x 20 mm.
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- 2017
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20. Pentoxifylline Inhibits WNT Signalling in β-Cateninhigh Patient-Derived Melanoma Cell Populations.
- Author
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Beata Talar, Anna Gajos-Michniewicz, Marcin Talar, Salem Chouaib, and Malgorzata Czyz
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Medicine ,Science - Abstract
The heterogeneity of melanoma needs to be addressed and combination therapies seem to be necessary to overcome intrinsic and acquired resistance to newly developed immunotherapies and targeted therapies. Although the role of WNT/β-catenin pathway in melanoma was early demonstrated, its contribution to the lack of the melanoma patient response to treatment was only recently recognized. Using patient-derived melanoma cell populations, we investigated the influence of pentoxifylline on melanoma cells with either high or low expression of β-catenin.Our results indicate that pentoxifylline inhibits the activity of the canonical WNT pathway in melanoma cell populations with high basal activity of this signalling. This is supported by lowered overall activity of transcription factors TCF/LEF and reduced nuclear localisation of active β-catenin. Moreover, treatment of β-cateninhigh melanoma cell populations with pentoxifylline induces downregulation of genes that are targets of the WNT/β-catenin pathway including connective tissue growth factor (CTGF) and microphthalmia-associated transcription factor (MITF-M), a melanocyte- and melanoma cell-specific regulator.These results suggest that pentoxifylline, a drug approved by the FDA in the treatment of peripheral arterial disease, might be tested in a subset of melanoma patients with elevated activity of β-catenin. This pharmaceutical might be tested as an adjuvant drug in combination therapies when the response to immunotherapy is prevented by high activity of the WNT/β-catenin pathway.
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- 2016
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21. MCL-1, BCL-XL and MITF Are Diversely Employed in Adaptive Response of Melanoma Cells to Changes in Microenvironment.
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Mariusz L Hartman, Beata Talar, Anna Gajos-Michniewicz, and Malgorzata Czyz
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Medicine ,Science - Abstract
Melanoma cells can switch their phenotypes in response to microenvironmental insults. Heterogeneous melanoma populations characterized by long-term growth and a high self-renewal capacity can be obtained in vitro in EGF(+)bFGF(+) medium whilst invasive potential of melanoma cells is increased in serum-containing cultures. In the present study, we have shown that originally these patient-derived melanoma populations exhibit variable expression of pro-survival genes from the BCL-2 family and inhibitors of apoptosis (IAPs), and differ in the baseline MCL-1 transcript stability as well. While being transferred to serum-containing medium, melanoma cells are well protected from death. Immediate adaptive response of melanoma cells selectively involves a temporary MCL-1 increase, both at mRNA and protein levels, and BCL-XL can complement MCL-1, especially in MITFlow populations. Thus, the extent of MCL-1 and BCL-XL contributions seems to be cell context-dependent. An increase in MCL-1 level results from a transiently enhanced stability of its transcript, but not from altered protein turnover. Inhibition of MCL-1 preceding transfer to serum-containing medium caused the induction of cell death in a subset of melanoma cells, which confirms the involvement of MCL-1 in melanoma cell survival during the rapid alteration of growth conditions. Additionally, immediate response to serum involves the transient increase in MITF expression and inhibition of ERK-1/2 activity. Uncovering the mechanisms of adaptive response to rapid changes in microenvironment may extend our knowledge on melanoma biology, especially at the stage of dissemination.
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- 2015
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22. Gene expression profiling identifies microphthalmia-associated transcription factor (MITF) and Dickkopf-1 (DKK1) as regulators of microenvironment-driven alterations in melanoma phenotype.
- Author
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Mariusz L Hartman, Beata Talar, Muhammad Zaeem Noman, Anna Gajos-Michniewicz, Salem Chouaib, and Malgorzata Czyz
- Subjects
Medicine ,Science - Abstract
BackgroundThe diversity of functional phenotypes observed within a tumor does not exclusively result from intratumoral genetic heterogeneity but also from the response of cancer cells to the microenvironment. We have previously demonstrated that the morphological and functional phenotypes of melanoma can be dynamically altered upon external stimuli.FindingsIn the present study, transcriptome profiles were generated to explore the molecules governing phenotypes of melanospheres grown in the bFGF(+)EGF(+) serum-free cultures and monolayers maintained in the serum-containing medium. Higher expression levels of MITF-dependent genes that are responsible for differentiation, e.g., TYR and MLANA, and stemness-related genes, e.g., ALDH1A1, were detected in melanospheres. These results were supported by the observation that the melanospheres contained more pigmented cells and cells exerting the self-renewal capacity than the monolayers. In addition, the expression of the anti-apoptotic, MITF-dependent genes e.g., BCL2A1 was also higher in the melanospheres. The enhanced activity of MITF in melanospheres, as illustrated by the increased expression of 74 MITF-dependent genes, identified MITF as a central transcriptional regulator in melanospheres. Importantly, several genes including MITF-dependent ones were expressed in melanospheres and original tumors at similar levels. The reduced MITF level in monolayers might be partially explained by suppression of the Wnt/β-catenin pathway, and DKK1, a secreted inhibitor of this pathway, was highly up-regulated in monolayers in comparison to melanospheres and original tumors. Furthermore, the silencing of DKK1 in monolayers increased the percentage of cells with self-renewing capacity.ConclusionsOur study indicates that melanospheres can be used to unravel the molecular pathways that sustain intratumoral phenotypic heterogeneity. Melanospheres directly derived from tumor specimens more accurately mirrored the morphology and gene expression profiles of the original tumors compared to monolayers. Therefore, melanospheres represent a relevant preclinical tool to study new anticancer treatment strategies.
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- 2014
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23. Possible association between suicide committed under influence of ethanol and a variant in the AUTS2 gene.
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Izabela Chojnicka, Krzysztof Gajos, Katarzyna Strawa, Grażyna Broda, Sylwia Fudalej, Marcin Fudalej, Piotr Stawiński, Aleksandra Pawlak, Paweł Krajewski, Marcin Wojnar, and Rafał Płoski
- Subjects
Medicine ,Science - Abstract
rs6943555 in AUTS2 has been shown to modulate ethanol consumption. We hypothesized that rs6943555 might be associated with completed suicide.We genotyped rs6943555 in 625 completed suicides and 3861 controls using real-time TaqMan Allelic Discrimination Assay. All individuals were Polish Caucasians.We detected an association between suicide and rs6943555 A allele (OR = 1.17, P = 0.018 for allelic comparison, OR = 1.24, P = 0.013 for dominant, and OR = 1.18, P = 0.020 for co-dominant model of inheritance). The association remained significant after adjusting for age and gender (co-dominant: P = 0.002 and dominant model: P = 0.001). After stratifying suicides according to blood ethanol concentration (BAC≤ 20 mg/dl and BAC > 20 mg/dl) the association remained significant only for cases who committed suicide under influence of alcohol (co-dominant: OR = 1.37, P = 0.004 and dominant model: OR = 1.45, P = 0.006). To validate this finding we genotyped another cohort of 132 cases. We reproduced the association between rs6943555 A allele and suicide under influence of ethanol (allelic comparison: OR = 1.55, P = 0.023; co-dominant : OR = 1.54, P = 0.031; dominant model: OR = 1.84, P = 0.015). Analyzing pooled suicides with BAC >20 mg/dl (N = 300) we found the association of rs6943555 A allele not only vs. controls (allelic OR = 1.41, P = 0.00029) but also vs. cases with BAC ≤ 20 mg/dl (N = 449, allelic OR = 1.33, P = 0.019).In our study rs6943555 A allele is associated with suicide committed after drinking ethanol shortly before death. The rs6943555 A allele may be linked to adverse emotional reaction to ethanol, which could explain the association with lower consumption in general population as well as the predisposition to suicide under influence of ethanol.
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- 2013
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