1. Large-Scale Phenomics Identifies Primary and Fine-Tuning Roles for CRKs in Responses Related to Oxidative Stress
- Author
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Gildas Bourdais, Paweł Burdiak, Adrien Gauthier, Lisette Nitsch, Jarkko Salojärvi, Channabasavangowda Rayapuram, Niina Idänheimo, Kerri Hunter, Sachie Kimura, Ebe Merilo, Aleksia Vaattovaara, Krystyna Oracz, David Kaufholdt, Andres Pallon, Damar Tri Anggoro, Dawid Glów, Jennifer Lowe, Ji Zhou, Omid Mohammadi, Tuomas Puukko, Andreas Albert, Hans Lang, Dieter Ernst, Hannes Kollist, Mikael Brosché, Jörg Durner, Jan Willem Borst, David B Collinge, Stanisław Karpiński, Michael F Lyngkjær, Silke Robatzek, Michael Wrzaczek, Jaakko Kangasjärvi, CRK Consortium, Department of Agricultural Sciences, Biosciences, Bioinformatics for Molecular Biology and Genomics (BMBG), Viikki Plant Science Centre (ViPS), Receptor-Ligand Signaling Group, Plant Biology, Plant-Fungal Interactions Group, Plant stress and natural variation, Plant ROS-Signalling, Institut de Recherche en Horticulture et Semences (IRHS), Université d'Angers (UA)-Institut National de la Recherche Agronomique (INRA)-AGROCAMPUS OUEST, Plante - microbe - environnement : biochimie, biologie cellulaire et écologie (PMEBBCE), Etablissement National d'Enseignement Supérieur Agronomique de Dijon (ENESAD)-Institut National de la Recherche Agronomique (INRA)-Université de Bourgogne (UB)-Centre National de la Recherche Scientifique (CNRS), University of Oulu, Physiologie des Semences, Université Pierre et Marie Curie - Paris 6 (UPMC), Fisico-Quimica Biologica, Universidade Federal do Rio de Janeiro (UFRJ), Institute of Biochemical Plant Pathology (BIOP), German Research Center for Environmental Health - Helmholtz Center München (GmbH), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), Centre National de la Recherche Scientifique (CNRS)-Université de Bourgogne (UB)-Institut National de la Recherche Agronomique (INRA)-Etablissement National d'Enseignement Supérieur Agronomique de Dijon (ENESAD), AGROCAMPUS OUEST-Institut National de la Recherche Agronomique (INRA)-Université d'Angers (UA), and Universidade Federal do Rio de Janeiro [Rio de Janeiro] (UFRJ)
- Subjects
0106 biological sciences ,Cancer Research ,[SDV]Life Sciences [q-bio] ,Arabidopsis ,protein-kinase ,Pseudomonas syringae ,01 natural sciences ,Biochemistry ,Adapter molecule crk ,light acclimation ,Phenomics ,Gene Expression Regulation, Plant ,Arabidopsis thaliana ,transcriptional regulation ,Genetics (clinical) ,ComputingMilieux_MISCELLANEOUS ,Regulation of gene expression ,0303 health sciences ,biology ,EPS-1 ,1184 Genetics, developmental biology, physiology ,flagellin perception ,Adaptation, Physiological ,Cell biology ,receptor-like kinase ,multiple sequence alignment ,Signal Transduction ,Research Article ,DNA, Bacterial ,Xanthine Oxidase ,lcsh:QH426-470 ,stomatal immunity ,Protein domain ,Biochemie ,arabidopsis-thaliana ,Protein Serine-Threonine Kinases ,pseudomonas-syringae ,03 medical and health sciences ,Ascomycota ,Genetics ,[SDV.BV]Life Sciences [q-bio]/Vegetal Biology ,[SDV.BBM]Life Sciences [q-bio]/Biochemistry, Molecular Biology ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics ,030304 developmental biology ,Plant Diseases ,Arabidopsis Proteins ,biology.organism_classification ,cell-death ,[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacy ,Oxidative Stress ,lcsh:Genetics ,Adaptation ,Reactive Oxygen Species ,Function (biology) ,010606 plant biology & botany - Abstract
Cysteine-rich receptor-like kinases (CRKs) are transmembrane proteins characterized by the presence of two domains of unknown function 26 (DUF26) in their ectodomain. The CRKs form one of the largest groups of receptor-like protein kinases in plants, but their biological functions have so far remained largely uncharacterized. We conducted a large-scale phenotyping approach of a nearly complete crk T-DNA insertion line collection showing that CRKs control important aspects of plant development and stress adaptation in response to biotic and abiotic stimuli in a non-redundant fashion. In particular, the analysis of reactive oxygen species (ROS)-related stress responses, such as regulation of the stomatal aperture, suggests that CRKs participate in ROS/redox signalling and sensing. CRKs play general and fine-tuning roles in the regulation of stomatal closure induced by microbial and abiotic cues. Despite their great number and high similarity, large-scale phenotyping identified specific functions in diverse processes for many CRKs and indicated that CRK2 and CRK5 play predominant roles in growth regulation and stress adaptation, respectively. As a whole, the CRKs contribute to specificity in ROS signalling. Individual CRKs control distinct responses in an antagonistic fashion suggesting future potential for using CRKs in genetic approaches to improve plant performance and stress tolerance., Author Summary Receptor-like kinases (RLKs) are important regulators in signal transduction in plants. However, the large number of RLKs and their high sequence similarity has hampered the analysis of RLKs. One of the largest subgroups of RLKs, the cysteine-rich receptor-like kinases (CRKs), has been suggested to be involved in mediating the effects of reactive oxygen species (ROS). While ROS are recognized as important signalling elements with a large variety of roles in plants, their ligands and achievement of signalling specificity remain unknown. Using insertion mutants we analysed the roles of CRKs in plant development and stress responses and show that CRKs have important roles as mediators of signalling specificity during regulation of stomatal aperture. Our study shows that, despite their large number and high sequence conservation, individual CRKs have intriguingly distinct functions in different aspects of plant life. This makes the CRKs promising candidates for future studies of their biochemical function.
- Published
- 2015
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