4 results on '"Caroline H. Ko"'
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2. Emergence of Noise-Induced Oscillations in the Central Circadian Pacemaker
- Author
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Yujiro Richard Yamada, Joseph S. Takahashi, David K. Welsh, Caroline H. Ko, Eric E. Zhang, Martin R. Ralph, Andrew C. Liu, Daniel B. Forger, Ethan D. Buhr, and Steve A. Kay
- Subjects
General Immunology and Microbiology ,QH301-705.5 ,business.industry ,Noise induced ,General Neuroscience ,Data_MISCELLANEOUS ,Correction ,Pattern recognition ,Biology ,General Biochemistry, Genetics and Molecular Biology ,ComputingMethodologies_PATTERNRECOGNITION ,Data_FILES ,Artificial intelligence ,Biology (General) ,General Agricultural and Biological Sciences ,business ,Circadian pacemaker - Abstract
The files for Datasets S1 and S5 were switched. The file that appears as Dataset S1 should be Dataset S5, and the file that appears as Dataset S5 should be Dataset S1. The legends appear in the correct order. Likewise, the file that appears as Dataset S2 should be Dataset S6, and the file that appears as Dataset S6 should be Dataset S2. These legends also appear in the correct order.
- Published
- 2010
- Full Text
- View/download PDF
3. Emergence of noise-induced oscillations in the central circadian pacemaker
- Author
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Andrew C. Liu, Eric E. Zhang, Martin R. Ralph, Yujiro Richard Yamada, Joseph S. Takahashi, David K. Welsh, Caroline H. Ko, Steve A. Kay, Ethan D. Buhr, Daniel B. Forger, and Mignot, Emmanuel
- Subjects
Circadian clock ,Neuroscience/Neural Homeostasis ,Cell Communication ,Medical and Health Sciences ,Quantitative Biology::Cell Behavior ,Tissue Culture Techniques ,Mice ,0302 clinical medicine ,Cyclic AMP ,Biology (General) ,Computer Science::Databases ,Mice, Knockout ,Neurons ,0303 health sciences ,Chronobiology ,Suprachiasmatic nucleus ,General Neuroscience ,Quantitative Biology::Molecular Networks ,food and beverages ,ARNTL Transcription Factors ,Period Circadian Proteins ,Biological Sciences ,Bacterial circadian rhythms ,Circadian Rhythm ,PER2 ,Suprachiasmatic Nucleus ,General Agricultural and Biological Sciences ,Sleep Research ,Research Article ,medicine.medical_specialty ,endocrine system ,QH301-705.5 ,1.1 Normal biological development and functioning ,Quantitative Biology::Tissues and Organs ,Knockout ,Computational Biology/Transcriptional Regulation ,Biology ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,Underpinning research ,Internal medicine ,Circadian Clocks ,medicine ,Animals ,Circadian rhythm ,030304 developmental biology ,Stochastic Processes ,General Immunology and Microbiology ,Quantitative Biology::Neurons and Cognition ,Agricultural and Veterinary Sciences ,Neurosciences ,Endocrinology ,Light effects on circadian rhythm ,nervous system ,Neuroscience ,030217 neurology & neurosurgery ,Developmental Biology - Abstract
Computational modeling and experimentation explain how intercellular coupling and intracellular noise can generate oscillations in a mammalian neuronal network even in the absence of cell-autonomous oscillators., Bmal1 is an essential transcriptional activator within the mammalian circadian clock. We report here that the suprachiasmatic nucleus (SCN) of Bmal1-null mutant mice, unexpectedly, generates stochastic oscillations with periods that overlap the circadian range. Dissociated SCN neurons expressed fluctuating levels of PER2 detected by bioluminescence imaging but could not generate circadian oscillations intrinsically. Inhibition of intercellular communication or cyclic-AMP signaling in SCN slices, which provide a positive feed-forward signal to drive the intracellular negative feedback loop, abolished the stochastic oscillations. Propagation of this feed-forward signal between SCN neurons then promotes quasi-circadian oscillations that arise as an emergent property of the SCN network. Experimental analysis and mathematical modeling argue that both intercellular coupling and molecular noise are required for the stochastic rhythms, providing a novel biological example of noise-induced oscillations. The emergence of stochastic circadian oscillations from the SCN network in the absence of cell-autonomous circadian oscillatory function highlights a previously unrecognized level of circadian organization., Author Summary The suprachiasmatic nucleus (SCN) is the master circadian pacemaker in mammals that controls and coordinates physiological processes in a daily manner. The SCN is composed of a network of cells, with each cell acting as an autonomous oscillator. In isolated individual cells, timekeeping is not precise because of the inherent randomness in the biochemical reactions within each cell, involving its core clock components. However, in the SCN network, precise rhythms can emerge because of intercellular coupling. In this article, we study a loss-of-function mutation of BMAL1, a core clock component, which eliminates timekeeping in isolated cells. Surprisingly, in both experiments and mathematical simulations, we find that noisy rhythms emerge from the SCN network even in the presence of this BMAL1 mutation. This random yet coordinated timekeeping has not been observed in previous modeling and experimental work and indicates that a network of cells can utilize noise to help compensate for loss of a physiological function. In normal function, the SCN network mitigates any variability observed in individual cellular rhythms and produces a precise and rhythmic network timekeeping signal. When the individual cells are no longer rhythmic, the coupling pathways within the SCN network can propagate stochastic rhythms that are a reflection of both feed-forward coupling mechanisms and intracellular noise. Thus, in a manner analogous to central pattern generators in neural circuits, rhythmicity can arise as an emergent property of the network in the absence of component pacemaker or oscillator cells.
- Published
- 2010
- Full Text
- View/download PDF
4. Emergence of noise-induced oscillations in the central circadian pacemaker.
- Author
-
Caroline H Ko, Yujiro R Yamada, David K Welsh, Ethan D Buhr, Andrew C Liu, Eric E Zhang, Martin R Ralph, Steve A Kay, Daniel B Forger, and Joseph S Takahashi
- Subjects
Biology (General) ,QH301-705.5 - Abstract
Bmal1 is an essential transcriptional activator within the mammalian circadian clock. We report here that the suprachiasmatic nucleus (SCN) of Bmal1-null mutant mice, unexpectedly, generates stochastic oscillations with periods that overlap the circadian range. Dissociated SCN neurons expressed fluctuating levels of PER2 detected by bioluminescence imaging but could not generate circadian oscillations intrinsically. Inhibition of intercellular communication or cyclic-AMP signaling in SCN slices, which provide a positive feed-forward signal to drive the intracellular negative feedback loop, abolished the stochastic oscillations. Propagation of this feed-forward signal between SCN neurons then promotes quasi-circadian oscillations that arise as an emergent property of the SCN network. Experimental analysis and mathematical modeling argue that both intercellular coupling and molecular noise are required for the stochastic rhythms, providing a novel biological example of noise-induced oscillations. The emergence of stochastic circadian oscillations from the SCN network in the absence of cell-autonomous circadian oscillatory function highlights a previously unrecognized level of circadian organization.
- Published
- 2010
- Full Text
- View/download PDF
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