8 results on '"Zarra I"'
Search Results
2. Cloning and expression pattern of a gene encoding an alpha-xylosidase active against xyloglucan oligosaccharides from Arabidopsis.
- Author
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Sampedro, J, Sieiro, C, Revilla, G, González-Villa, T, and Zarra, I
- Abstract
An alpha-xylosidase active against xyloglucan oligosaccharides was purified from cabbage (Brassica oleracea var. capitata) leaves. Two peptide sequences were obtained from this protein, the N-terminal and an internal one, and these were used to identify an Arabidopsis gene coding for an alpha-xylosidase that we propose to call AtXYL1. It has been mapped to a region of chromosome I between markers at 100.44 and 107.48 cM. AtXYL1 comprised three exons and encoded a peptide that was 915 amino acids long, with a potential signal peptide of 22 amino acids and eight possible N-glycosylation sites. The protein encoded by AtXYL1 showed the signature regions of family 31 glycosyl hydrolases, which comprises not only alpha-xylosidases, but also alpha-glucosidases. The alpha-xylosidase activity is present in apoplastic extractions from Arabidopsis seedlings, as suggested by the deduced signal peptide. The first eight leaves from Arabidopsis plants were harvested to analyze alpha-xylosidase activity and AtXYL1 expression levels. Both increased from older to younger leaves, where xyloglucan turnover is expected to be higher. When this gene was introduced in a suitable expression vector and used to transform Saccharomyces cerevisiae, significantly higher alpha-xylosidase activity was detected in the yeast cells. alpha-Glucosidase activity was also increased in the transformed cells, although to a lesser extent. These results show that AtXYL1 encodes for an apoplastic alpha-xylosidase active against xyloglucan oligosaccharides that probably also has activity against p-nitrophenyl-alpha-D-glucoside.
- Published
- 2001
- Full Text
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3. Soluble and Membrane-Bound β-Glucosidases Are Involved in Trimming the Xyloglucan Backbone.
- Author
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Sampedro J, Valdivia ER, Fraga P, Iglesias N, Revilla G, and Zarra I
- Subjects
- Gene Expression Regulation, Plant, Genetic Complementation Test, Glucuronidase metabolism, Mutation genetics, Protein Binding, Solubility, alpha-L-Fucosidase metabolism, Arabidopsis enzymology, Arabidopsis metabolism, Arabidopsis Proteins metabolism, Cell Membrane enzymology, Glucans metabolism, Xylans metabolism, beta-Glucosidase metabolism
- Abstract
In many flowering plants, xyloglucan is a major component of primary cell walls, where it plays an important role in growth regulation. Xyloglucan can be degraded by a suite of exoglycosidases that remove specific sugars. In this work, we show that the xyloglucan backbone, formed by (1→4)-linked β-d-glucopyranosyl residues, can be attacked by two different Arabidopsis (Arabidopsis thaliana) β-glucosidases from glycoside hydrolase family 3. While BGLC1 (At5g20950; for β-glucosidase active against xyloglucan 1) is responsible for all or most of the soluble activity, BGLC3 (At5g04885) is usually a membrane-anchored protein. Mutations in these two genes, whether on their own or combined with mutations in other exoglycosidase genes, resulted in the accumulation of partially digested xyloglucan subunits, such as GXXG, GXLG, or GXFG. While a mutation in BGLC1 had significant effects on its own, lack of BGLC3 had only minor effects. On the other hand, double bglc1 bglc3 mutants revealed a synergistic interaction that supports a role for membrane-bound BGLC3 in xyloglucan metabolism. In addition, bglc1 bglc3 was complemented by overexpression of either BGLC1 or BGLC3 In overexpression lines, BGLC3 activity was concentrated in a microsome-enriched fraction but also was present in soluble form. Finally, both genes were generally expressed in the same cell types, although, in some cases, BGLC3 was expressed at earlier stages than BGLC1 We propose that functional specialization could explain the separate localization of both enzymes, as a membrane-bound β-glucosidase could specifically digest soluble xyloglucan without affecting the wall-bound polymer., (© 2017 American Society of Plant Biologists. All Rights Reserved.)
- Published
- 2017
- Full Text
- View/download PDF
4. AtBGAL10 is the main xyloglucan β-galactosidase in Arabidopsis, and its absence results in unusual xyloglucan subunits and growth defects.
- Author
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Sampedro J, Gianzo C, Iglesias N, Guitián E, Revilla G, and Zarra I
- Subjects
- Agrobacterium tumefaciens genetics, Arabidopsis genetics, Arabidopsis growth & development, Arabidopsis Proteins metabolism, Cell Wall enzymology, Cell Wall genetics, Enzyme Activation, Flowers growth & development, Gene Expression Regulation, Plant, Genes, Plant, Genes, Reporter, Mutagenesis, Insertional, Phenotype, Phylogeny, Pichia genetics, Plant Leaves enzymology, Plant Leaves genetics, Plant Leaves growth & development, Plant Stems enzymology, Plant Stems genetics, Plant Stems growth & development, Promoter Regions, Genetic, Xylosidases metabolism, beta-Galactosidase genetics, Arabidopsis enzymology, Arabidopsis Proteins genetics, Glucans metabolism, Xylans metabolism, Xylosidases genetics, beta-Galactosidase metabolism
- Abstract
In growing cells, xyloglucan is thought to connect cellulose microfibrils and regulate their separation during wall extension. In Arabidopsis (Arabidopsis thaliana), a significant proportion of xyloglucan side chains contain β-galactose linked to α-xylose at O2. In this work, we identified AtBGAL10 (At5g63810) as the gene responsible for the majority of β-galactosidase activity against xyloglucan. Xyloglucan from bgal10 insertional mutants was found to contain a large proportion of unusual subunits, such as GLG and GLLG. These subunits were not detected in a bgal10 xyl1 double mutant, deficient in both β-galactosidase and α-xylosidase. Xyloglucan from bgal10 xyl1 plants was enriched instead in XXLG/XLXG and XLLG subunits. In both cases, changes in xyloglucan composition were larger in the endoglucanase-accessible fraction. These results suggest that glycosidases acting on nonreducing ends digest large amounts of xyloglucan in wild-type plants, while plants deficient in any of these activities accumulate partly digested subunits. In both bgal10 and bgal10 xyl1, siliques and sepals were shorter, a phenotype that could be explained by an excess of nonreducing ends leading to a reinforced xyloglucan network. Additionally, AtBGAL10 expression was examined with a promoter-reporter construct. Expression was high in many cell types undergoing wall extension or remodeling, such as young stems, abscission zones, or developing vasculature, showing good correlation with α-xylosidase expression.
- Published
- 2012
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5. MYB46 modulates disease susceptibility to Botrytis cinerea in Arabidopsis.
- Author
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Ramírez V, Agorio A, Coego A, García-Andrade J, Hernández MJ, Balaguer B, Ouwerkerk PB, Zarra I, and Vera P
- Subjects
- Arabidopsis immunology, Arabidopsis microbiology, Arabidopsis Proteins genetics, Binding Sites, Cell Wall chemistry, Gene Expression Profiling, Gene Expression Regulation, Plant, Host-Pathogen Interactions, Immunity, Innate, Lignin metabolism, Mutagenesis, Insertional, Oligonucleotide Array Sequence Analysis, Plant Diseases immunology, Plant Diseases microbiology, Plant Immunity, Plants, Genetically Modified genetics, Plants, Genetically Modified immunology, Plants, Genetically Modified microbiology, Promoter Regions, Genetic, RNA, Plant, Transcription Factors genetics, Arabidopsis genetics, Arabidopsis Proteins metabolism, Botrytis pathogenicity, Plant Diseases genetics, Transcription Factors metabolism
- Abstract
In this study, we show that the Arabidopsis (Arabidopsis thaliana) transcription factor MYB46, previously described to regulate secondary cell wall biosynthesis in the vascular tissue of the stem, is pivotal for mediating disease susceptibility to the fungal pathogen Botrytis cinerea. We identified MYB46 by its ability to bind to a new cis-element located in the 5' promoter region of the pathogen-induced Ep5C gene, which encodes a type III cell wall-bound peroxidase. We present genetic and molecular evidence indicating that MYB46 modulates the magnitude of Ep5C gene induction following pathogenic insults. Moreover, we demonstrate that different myb46 knockdown mutant plants exhibit increased disease resistance to B. cinerea, a phenotype that is accompanied by selective transcriptional reprogramming of a set of genes encoding cell wall proteins and enzymes, of which extracellular type III peroxidases are conspicuous. In essence, our results substantiate that defense-related signaling pathways and cell wall integrity are interconnected and that MYB46 likely functions as a disease susceptibility modulator to B. cinerea through the integration of cell wall remodeling and downstream activation of secondary lines of defense.
- Published
- 2011
- Full Text
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6. Lack of α-xylosidase activity in Arabidopsis alters xyloglucan composition and results in growth defects.
- Author
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Sampedro J, Pardo B, Gianzo C, Guitián E, Revilla G, and Zarra I
- Subjects
- Arabidopsis growth & development, Arabidopsis Proteins genetics, Mutagenesis, Insertional, Mutation, Promoter Regions, Genetic, Seedlings genetics, Xylosidases genetics, Arabidopsis genetics, Arabidopsis Proteins metabolism, Glucans chemistry, Seedlings growth & development, Xylans chemistry, Xylosidases metabolism
- Abstract
Xyloglucan is the main hemicellulose in the primary cell walls of most seed plants and is thought to play a role in regulating the separation of cellulose microfibrils during growth. Xylose side chains block the degradation of the backbone, and α-xylosidase activity is necessary to remove them. Two Arabidopsis (Arabidopsis thaliana) mutant lines with insertions in the α-xylosidase gene AtXYL1 were characterized in this work. Both lines showed a reduction to undetectable levels of α-xylosidase activity against xyloglucan oligosaccharides. This reduction resulted in the accumulation of XXXG and XXLG in the liquid growth medium of Atxyl1 seedlings. The presence of XXLG suggests that it is a poor substrate for xyloglucan β-galactosidase. In addition, the polymeric xyloglucan of Atxyl1 lines was found to be enriched in XXLG subunits, with a concomitant decrease in XXFG and XLFG. This change can be explained by extensive exoglycosidase activity at the nonreducing ends of xyloglucan chains. These enzymes could thus have a larger role than previously thought in the metabolism of xyloglucan. Finally, Atxyl1 lines showed a reduced ability to control the anisotropic growth pattern of different organs, pointing to the importance of xyloglucan in this process. The promoter of AtXYL1 was shown to direct expression to many different organs and cell types undergoing cell wall modifications, including trichomes, vasculature, stomata, and elongating anther filaments.
- Published
- 2010
- Full Text
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7. Potential role for purple acid phosphatase in the dephosphorylation of wall proteins in tobacco cells.
- Author
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Kaida R, Serada S, Norioka N, Norioka S, Neumetzler L, Pauly M, Sampedro J, Zarra I, Hayashi T, and Kaneko TS
- Subjects
- Cells, Cultured, Glucans metabolism, Molecular Sequence Data, Phosphorylation, Proteome metabolism, Xylans metabolism, Xylosidases metabolism, beta-Glucosidase metabolism, Acid Phosphatase metabolism, Cell Wall metabolism, Glycoproteins metabolism, Plant Proteins metabolism, Nicotiana enzymology
- Abstract
It is not yet known whether dephosphorylation of proteins catalyzed by phosphatases occurs in the apoplastic space. In this study, we found that tobacco (Nicotiana tabacum) purple acid phosphatase could dephosphorylate the phosphoryl residues of three apoplastic proteins, two of which were identified as alpha-xylosidase and beta-glucosidase. The dephosphorylation and phosphorylation of recombinant alpha-xylosidase resulted in a decrease and an increase in its activity, respectively, when xyloglucan heptasaccharide was used as a substrate. Attempted overexpression of the tobacco purple acid phosphatase NtPAP12 in tobacco cells not only decreased the activity levels of the glycosidases but also increased levels of xyloglucan oligosaccharides and cello-oligosaccharides in the apoplast during the exponential phase. We suggest that purple acid phosphatase controls the activity of alpha-xylosidase and beta-glucosidase, which are responsible for the degradation of xyloglucan oligosaccharides and cello-oligosaccharides in the cell walls.
- Published
- 2010
- Full Text
- View/download PDF
8. AtFXG1, an Arabidopsis gene encoding alpha-L-fucosidase active against fucosylated xyloglucan oligosaccharides.
- Author
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de La Torre F, Sampedro J, Zarra I, and Revilla G
- Subjects
- Amino Acid Sequence, Arabidopsis genetics, Brassica genetics, Gene Expression Regulation, Enzymologic, Glycosides metabolism, Molecular Sequence Data, Plant Leaves genetics, Sequence Homology, Amino Acid, Substrate Specificity, alpha-L-Fucosidase genetics, alpha-L-Fucosidase isolation & purification, Arabidopsis enzymology, Brassica enzymology, Glucans, Plant Leaves enzymology, Polysaccharides metabolism, Xylans, alpha-L-Fucosidase metabolism
- Abstract
An alpha-L-fucosidase (EC 3.2.1.51) able to release the t-fucosyl residue from the side chain of xyloglucan oligosaccharides has been detected in the leaves of Arabidopsis plants. Moreover, an alpha-L-fucosidase with similar substrate specificity was purified from cabbage (Brassica oleracea) leaves to render a single band on SDS-PAGE. Two peptide sequences were obtained from this protein band, and they were used to identify an Arabidopsis gene coding for an alpha-fucosidase that we propose to call AtFXG1. In addition, an Arabidopsis gene with homology with known alpha-L-fucosidases has been also found, and we proposed to name it as AtFUC1. Both AtFXG1 and ATFUC1 were heterologously expressed in Pichia pastoris cells and the alpha-L-fucosidase activities secreted to the culture medium. The alpha-L-fucosidase encoded by AtFXG1 was active against the oligosaccharides from xyloglucan XXFG as well as against 2'-fucosyl-lactitol but not against p-nitrophenyl-alpha-L-fucopyranoside. However, the AtFUC1 heterologously expressed was active only against 2'-fucosyl-lactitol. Thus, the former must be related to xyloglucan metabolism.
- Published
- 2002
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