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Background and Aims: Due to their high water use efficiency, Crassulacean acid metabolism (CAM) plants are of environmental and economic importance in the arid and semiarid regions of the world. Moreover, many CAM plants (e.g., Agave tequilana) have attractive qualities for biofuel production such as a relatively low lignin content and high amount of soluble carbohydrates. However, the current estimates of CAM productivity are based on empirical stress indices that create large uncertainties. As a first step towards a more accurate quantification of CAM productivity, this paper introduces a new model that couples both soil and atmosphere conditions to CAM photosynthesis. Methods: The new CAM model is based upon well established C photosynthesis models coupled to a nonlinear circadian rhythm oscillator for the control of the photosynthesis carbon fluxes. The leaf-level dynamics are coupled to a simple, yet realistic description of the soil-plant-atmosphere continuum, including a plant water capacitance module. Results: The resulting model reproduces the four phases of CAM photosynthes is and the evolution of their dynamics during a soil moisture drydown, as a function of soil type, plant features, and climatic conditions. Conclusion: The results help quantify the impact of soil water availability on CAM carbon assimilation and transpiration flux. [ABSTRACT FROM AUTHOR]

Despite the observed impact of water stress on photosynthesis, some of the most used models of CO2 assimilation in C3 and C4 functional types do not directly account for it. We discuss an extension of these models, which explicitly includes the metabolic and diffusive limitations due to water stress on photosynthesis. Functional relationships describing the photosynthetic processes and CO2 diffusion inside leaves are modified to account for leaf water status on the basis of experimental results available in the literature. Extensive comparison with data shows that the model is suitable to describe the reduction in CO2 assimilation rate with decreasing leaf water potentials in various species. A simultaneous analysis of photosynthesis, transpiration and soil moisture dynamics is then carried out to explore the actual impact of drought on different photosynthesis processes and on the overall plant activity. The model well reproduces measured CO2 assimilation rate as a function of soil moisture and could be useful to formulate hypotheses for detailed experiments as well as to simulate in detail transpiration and photosynthesis dynamics under water stress. [ABSTRACT FROM AUTHOR]