10 results on '"Gerald Pattenden"'
Search Results
2. Novel polyoxazole-based cyclopeptides from Streptomyces sp. Total synthesis of the cyclopeptide YM-216391 and synthetic studies towards telomestatin
- Author
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Jon Deeley, Gerald Pattenden, and Anna Bertram
- Subjects
chemistry.chemical_classification ,Spectrometry, Mass, Electrospray Ionization ,Dipeptide ,Stereochemistry ,Carboxylic acid ,Organic Chemistry ,Total synthesis ,Biochemistry ,Telomestatin ,Peptides, Cyclic ,chemistry.chemical_compound ,chemistry ,Amide ,HATU ,Physical and Theoretical Chemistry ,Thiazole ,Oxazoles ,Oxazole - Abstract
A convergent, complementary, synthetic approach to the contiguously linked tris-oxazole units 10, 11 and 12 in telomestatin (1) and YM-216391 (2) is described. The route involves coupling reactions between oxazole 4-carboxylic acids, viz 16a, 16c, 16d and oxazole 2-substituted methylamines, viz 16b, 16e, 17, leading to the amides 18 and 21, followed by cyclodehydrations to the corresponding bis-oxazole oxazolines, e.g. 19, and oxidations of the latter using well-established protocols. The tris-oxazoles 11 and 12 were next converted stepwise into the hexa-oxazole bis-macrolactams 33. Although the bis-macrolactams 33 (cf. 28) could be converted into the corresponding oxazoline-hexa-oxazoles 34 and to the enamides 35, neither of these intermediates could be elaborated to the hepta-oxazole 30en route to telomestatin 1. Likewise, neither the hexa-oxazole 47 or application of an intramolecular Hantzsch oxazole ring-forming reaction from 44b allowed access to the advanced polyoxazole-macrolactam intermediates 48 and 30a, respectively, towards telomestatin. Combination of the tris-oxazole based methylamine 70 with the dipeptide carboxylic acid 71 derived from D-valine and L-isoleucine, leads to the corresponding amide which, in two straightforward steps, is converted into the -amino acid 78. Macrolactamisation of 78, using HATU, next produces the cyclopeptide 79 which is then elaborated to the thiazole and oxazole based cyclopeptide YM-216391 (2). The synthetic cyclopeptide 2 is shown to be the enantiomer of the natural product isolated from Streptomyces nobilis.
- Published
- 2008
3. Total synthesis of (-)-ulapualide A, a novel tris-oxazole macrolide from marine nudibranchs, based on some biosynthesis speculation
- Author
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James G. K. Yee, Gary M. Walker, James Kempson, Gerald Pattenden, Neil J. Ashweek, and Charles Baker-Glenn
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Models, Molecular ,Magnetic Resonance Spectroscopy ,Stereochemistry ,Molecular Conformation ,Oxazoline ,Crystallography, X-Ray ,Biochemistry ,Aldehyde ,chemistry.chemical_compound ,Species Specificity ,Biomimetics ,HATU ,Animals ,Physical and Theoretical Chemistry ,Imide ,Oxazoles ,Oxazole ,chemistry.chemical_classification ,Carbon Isotopes ,Organic Chemistry ,Enantioselective synthesis ,Total synthesis ,Stereoisomerism ,Reference Standards ,chemistry ,Mollusca ,Enone - Abstract
A new, second generation, total synthesis of ulapualide A (1), whose stereochemistry was recently determined from X-ray analysis of its complex with the protein actin, is described. The synthesis is designed and based on some speculation of the biosynthetic origin of the contiguous tris-oxazole unit in ulapualide A, alongside that of the related co-metabolites that contain only two oxazole rings, e.g. 6 and 7. The mono-oxazole carboxylic acid 67b and the mono-oxazole secondary 55b alcohol which, together, contain all of the 10 asymmetric centres in the natural metabolite, were first elaborated using a combination of contemporary asymmetric synthesis protocols. Esterification of 67b with 55b under Yamaguchi conditions gave the ester 77 which was then converted into the omega-amino acid 18a following simultaneous deprotection of the t-butyl ester and the N-Boc protecting groups. Macrolactamisation of 18a, using HATU, now gave the key intermediate macrolactam 17, containing two of the three oxazole rings in ulapualide A (1). A number of procedures were used to introduce the third oxazole ring in ulapualide A from 17, including: a) cyclodehydration to the oxazoline 78a followed by oxidation using nickel peroxide leading to 76; b) dehydration to the enamide 79, followed by conversion into the methoxyoxazoline 78b, via 80, and elimination of methanol from 78b using camphorsulfonic acid. The tris-oxazole macrolide 76 was next converted into the aldehyde 82b in four straightforward steps, which was then reacted with N-methylformamide, leading to the E-alkenylformamide 83. Removal of the TBDPS protection at C3 in 83 finally gave (-)-ulapualide A, whose 1H and 13C NMR spectroscopic data were indistinguishable from those obtained for naturally derived material. It is likely that the tris-oxazole unit in ulapualide A (1) is derived in nature from a cascade of cyclodehydrations from an acylated tris-serine precursor, e.g.9, followed by oxidation of the resulting tris-oxazoline intermediate, i.e.10. It is also plausible to speculate that the biosynthesis of metabolites related to ulapualide A, e.g. the bis-oxazole 6 and the imide 7, involve cyclisations of just two of the serine units in 9. These speculations were given some credence by carrying out pertinent interconversions involving the bis-oxazole amide 24, the enamide 25, the imide 26, the oxazoline 27 and the tris-oxazole 30 as model compounds. An alternative strategy to the tris-oxazole macrolide intermediate 76 was also examined, involving preliminary synthesis of the aldehyde 73, containing a shortened (C25-C34) side chain from 67b and 47b. A Wadsworth-Emmons olefination reaction between 73 and the phosphonate ester 74 led smoothly to the E-alkene 75, but we were not able to reduce selectively the conjugated enone group in 75 to 76 without simultaneous reduction of the oxazole alkene bond, using a variety of reagents and reaction conditions.
- Published
- 2008
4. Synthesis of libraries of thiazole, oxazole and imidazole-based cyclic peptides from azole-based amino acids. A new synthetic approach to bistratamides and didmolamides
- Author
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Nakia Maulucci, Gerald Pattenden, Siti Mariam Mohd Nor, Anna Bertram, and Olivia M. New
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Stereochemistry ,Chemistry, Pharmaceutical ,Chemistry, Organic ,Phenylalanine ,Oxazoline ,Biochemistry ,Peptides, Cyclic ,chemistry.chemical_compound ,Valine ,Animals ,Urochordata ,Physical and Theoretical Chemistry ,Amino Acids ,Thiazole ,Oxazoles ,Oxazole ,chemistry.chemical_classification ,Alanine ,Organic Chemistry ,Imidazoles ,Cyclic peptide ,Amino acid ,Thiazoles ,chemistry ,Models, Chemical - Abstract
Treatment of a 1 : 1 mixture of the thiazole-based amino acids 8a and 8b with FDPP-i-Pr(2)NEt in CH(3)CN gave a mixture of the cyclic trimers 14, 15, 16 and 17 and the cyclic tetramers 19 and 23 in the ratio 2 : 7 : 5 : 8 : 1 : 1 and in a combined yield of 70%. Separate coupling reactions between the bisimidazole amino acid 45 and the thiazole/oxazole amino acids 43a and 42a in the presence of FDPP-i-Pr(2)NEt led to the bisimidazole based cyclic trimers 55 and 57 respectively (54-57%) and to the cyclic tetramer 56 (8-11%). Similar coupling reactions involving the bisthiazole and bisoxazole amino acids 49 and 47 with the imidazole/oxazole/thiazole amino acids 41a, 42a and 43a gave rise to the library of oxazole, thiazole and imidazole-based cyclic peptides 58, 59, 60, 61, 62, 63, 64 and 65. A coupling reaction between the bisthiazole amino acid 49 and the oxazole amino acid 73 led to an efficient (36% overall) synthesis of bistratamide H (67) found in the ascidian Lissoclinum bistratum. Coupling reactions involving oxazolines with thiazole amino acids were less successful. Thus, a coupling reaction between the phenylalanine-based oxazoline amino acid 71a and either the thiazole amino acid 8a or the bisthiazole amino acid 74 gave only a 2% yield of the cyclic hexapeptide didmolamide A (4) found in the ascidian Didemnum molle. Didmolamide B (68) was obtained in 9% yield from a coupling reaction between 74 and the phenylalanine threonine amino acid 72, using either FDPP or DPPA.
- Published
- 2007
5. Approaches to the quaternary stereocentre and to the heterocyclic core in diazonamide A using the Heck reaction and related coupling reactions
- Author
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Alexander J. Blake, James E. M. Booker, Matthew S. Ling, David J. Sinclair, Jaya Prabhakaran, Graham Meek, Alicia Boto, Gerald Pattenden, Gwydion H. Churchill, and Clive P. Green
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Models, Molecular ,Molecular Structure ,Stereochemistry ,Organic Chemistry ,Ether ,Stereoisomerism ,Crystal structure ,Crystallography, X-Ray ,Biochemistry ,Heterocyclic Compounds, 4 or More Rings ,Coupling reaction ,chemistry.chemical_compound ,chemistry ,Cyclization ,Heck reaction ,Yield (chemistry) ,Molecule ,Physical and Theoretical Chemistry ,Oxazoles - Abstract
In model studies towards the quaternary centre at the heart of diazonamide A (early structure 2; revised structure 1), cyclisations of the alkene-substituted iodoaryls 4, 13, 18 and 23, under Heck reaction conditions, were shown to lead to the corresponding benzodihydrofuran 5, benzofuranone 14 and the oxindoles 19 and 24 respectively, in 50–80% yield. Further manipulation of the benzodihydrofuran 5 then led to the intermediates 30, 33 and 39, which make up parts of the oxazole–indole heterocyclic core in diazonamide A. Attempts to perform a corresponding 13-exo-trig Heck cyclisation from the precursor 46a, prepared from 44 and 45, leading to 47 were not successful. A similar outcome was obtained during attempts to effect Heck cyclisations from the ester 57 and the related ether 59. Treatment of the chromene-substituted iodoaryl 62 with Pd(OAc)2, PPh3 and Ag2CO3 led to the spirocycle 64 as a crystalline solid. X-Ray crystal structure analysis established that the quaternary centre in 64 had the same configuration as that present in diazonamide A (1).
- Published
- 2007
6. Total synthesis of myxothiazols, novel bis-thiazole beta-methoxyacrylate-based anti-fungal compounds from myxobacteria
- Author
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Ian R. Waldron, John M. Clough, Gerald Pattenden, K. Srinivasa Reddy, Bruce J. Martin, and Henry Dube
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chemistry.chemical_classification ,Antifungal Agents ,Myxothiazol ,Stereochemistry ,Organic Chemistry ,Phosphonium salt ,Total synthesis ,Biochemistry ,Aldehyde ,chemistry.chemical_compound ,Thiazoles ,chemistry ,Aldol reaction ,Ylide ,Wittig reaction ,Methacrylates ,Myxococcales ,Physical and Theoretical Chemistry ,Thiazole - Abstract
Convergent total syntheses of myxothiazols A and Z are described. The syntheses are based on elaboration of the (S)-E,E-diene thioamide 22, conversion of 22 into the bis-thiazole 27 and Wittig reactions between 27c and the aldehyde 30. The substituted beta-methoxyacrylate aldehyde 30 was produced via an Evans asymmetric aldol protocol or via the 2H-pyran-2-one 31. An E-selective Wittig reaction between the ylide derived from the phosphonium salt 27c and the (+)-aldehyde 30 led to (+)-myxothiazol Z (1b), and a corresponding reaction with the (+/-)-acrylamide aldehyde 44 gave (+/-)-myxothiazol A (1a). Complementary studies led to synthesis of the ester 47b, corresponding to myxothiazol R and myxothiazol S.
- Published
- 2006
7. Synthetic studies towards furanocembrane diterpenes. A total synthesis of bis-deoxylophotoxin
- Author
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Maria S. Hadjisoteriou, Gerald Pattenden, Felix Gonzalez‐Lopez de Turiso, and Manuel Cases
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Spectrometry, Mass, Electrospray Ionization ,Chemistry ,Stereochemistry ,Organic Chemistry ,Total synthesis ,Conjugated system ,Biochemistry ,Stille reaction ,chemistry.chemical_compound ,Cyclization ,Intramolecular force ,Bis-deoxylophotoxin ,Vinyl iodide ,Lophogorgia ,Physical and Theoretical Chemistry ,Diterpenes ,Furans ,Enone - Abstract
Synthetic approaches to the furanocembrane family of natural products, e.g. lophotoxins, pukalides, bipinnatins, based on: i) an intramolecular cyclisation of an α,β-unsaturated acyl radical intermediate into a conjugated enone, viz.18 → 17, and ii) an intramolecular Stille coupling reaction involving a 2-stannylfuran and a vinyl iodide, i.e.67 → 68, are described. A total synthesis of bis-deoxylophotoxin 71a, the probable biological precursor to the neurotoxin lophotoxin 1, isolated from species of the Pacific sea whip Lophogorgia, is then presented.
- Published
- 2005
8. alpha,beta-Unsaturated and cyclopropyl acyl radicals, and their ketene alkyl radical equivalents. Ring synthesis and tandem cyclisation reactions
- Author
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Gerald Pattenden, Nicola M. A. Herbert, Nicole M. Harrington-Frost, and Christopher J. Hayes
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chemistry.chemical_classification ,Stereochemistry ,Radical ,Organic Chemistry ,Ketene ,Biochemistry ,Aldehyde ,Enol ,Cyclopropane ,Chrysanthemic acid ,chemistry.chemical_compound ,chemistry ,Physical and Theoretical Chemistry ,Alkyl ,Lactone - Abstract
Treatment of the alpha,beta-unsaturated selenyl esters 12 and 14 with Bu(3)SnH-AIBN produces the corresponding 2-cyclohexenones 13 and 15 respectively via presumed alpha-ketene alkyl radical intermediates, viz. 10. By contrast, the 2,7-diene esters 34 and 39 undergo tandem radical cyclisations producing diquinanes, e.g.(76%), and the corresponding allene-substituted alpha,beta-unsaturated selenyl ester 48 gives the cyclooctadienone 56 on treatment with Bu(3)SnH-AIBN in refluxing benzene. The selenyl ester 19 derived from chrysanthemic acid produces a mixture of the gamma,delta-unsaturated aldehyde 22 and the corresponding dimer 25a on treatment with Bu(3)SnH-AIBN. Furthermore, in the presence of methanol the only product from this reaction was the bis(methyl ester) dimer 25b, thereby lending further credence to the involvement of ketene alkyl radical intermediates in these reactions, and in the aforementioned reactions involving 2,6- and 2,7-diene selenyl esters. Treatment of the cyclopropane selenyl esters and , containing keto- and oxy-group functionality in their side-chains, with Bu(3)SnH-AIBN led to excellent syntheses of the enol lactone 66 (76%) and the trans-fused bicyclo[6.1.0]nonane 67 (80-95%) respectively.
- Published
- 2005
9. Tandem cyclisations involving alpha-ketenyl alkyl radicals. New syntheses of the natural triquinanes pentalenene and modhephene
- Author
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Nicole M. Harrington-Frost, Benoît De Boeck, and Gerald Pattenden
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Bridged-Ring Compounds ,Cyclopentanes ,Free Radicals ,Stereochemistry ,Molecular Conformation ,Stereoisomerism ,Sesquiterpene ,Biochemistry ,Terpene ,chemistry.chemical_compound ,Pentalenene ,Organic chemistry ,Physical and Theoretical Chemistry ,Alkyl ,chemistry.chemical_classification ,Polycyclic Sesquiterpenes ,Tandem ,Chemistry ,Organic Chemistry ,Alkyl radicals ,General Medicine ,Ethylenes ,Ketones ,Propellane ,Cyclization ,Sesquiterpenes ,Modhephene - Abstract
New synthetic approaches to the angular and propellane sesquiterpene triquinanes (+/-)-pentalenene 2 and (+/-)-modhephene 3, respectively, are described. The syntheses are based on tandem cyclisations involving alpha-ketene alkyl radical intermediates produced from alpha,beta-unsaturated acyl radical species, as highlighted in Schemes 2 and 4.
- Published
- 2005
10. A total synthesis of (+/-)-phomactin A
- Author
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Christopher M. Diaper, William P. D. Goldring, and Gerald Pattenden
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Chromium ,Stereochemistry ,Ring (chemistry) ,Biochemistry ,Aldehyde ,Heterocyclic Compounds, 4 or More Rings ,chemistry.chemical_compound ,Ascomycota ,Nickel ,Phomactin A ,Benzoquinones ,Physical and Theoretical Chemistry ,Platelet Activating Factor ,Pyrans ,chemistry.chemical_classification ,Aldehydes ,Organic Chemistry ,Total synthesis ,Stereoisomerism ,General Medicine ,Ketones ,chemistry ,Models, Chemical ,Pyran ,Vinyl iodide ,Hemiacetal - Abstract
A total synthesis of the PAF antagonist phomactin A (1), isolated from the marine fungus Phoma sp. is described. The synthesis is based on a Cr(II)/Ni(II) macrocyclisation from the aldehyde vinyl iodide 14, leading to the key phomactatrienol intermediate 16a, followed by elaboration of 16a to the epoxyketone 21, which undergoes spontaneous pyran and hemiacetal ring formation to 1 on deprotection with DDQ.
- Published
- 2003
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