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• Distinct distributions of 3-OH-FAs are found in soils, marine- and lake sediments. • First systematic investigation of 3-OH-FAs in lake environments. • We propose a novel temperature proxy based on 3-OH-FAs for lake environments. Bacterial 3-hydroxy fatty acids (3-OH-FAs) show potential for terrestrial paleoclimate reconstruction; however, the possibility of using 3-OH-FAs as proxies in lacustrine environments remains to be investigated. We analysed the composition and distribution of 3-OH-FAs in surface sediments from 20 Chinese alkaline lakes and investigated the development of climate proxies based on 3-OH-FAs in these lacustrine environments. The results show that lake sediments contain higher relative abundances of anteiso 3-OH-FAs compared to soils. Analysis of the gene community composition from Lake Liangzi reveals that Gram-negative bacterial communities in that lake environment are distinct from marine sediments from the South China Sea but share many characteristics with soils from Mt. Yujia at the phylum level. At the class level, the Lake Liangzi samples yield distinctly higher proportions of Deltaproteobacteria (23%), Betaproteobacteria (13%), Gammaproteobacteria (14%), and Bacterioidia (10%). pH proxies based on 3-OH-FAs (Branching Ratio, Branched index, RIN and RIAN) yield weak linear relationships with lake water pH, while RAN 13 (previously proposed as a sea surface temperature proxy) shows a linear relationship with mean annual air temperatures (MAAT; ranging from 5 °C to 17 °C). The soil temperature proxies RAN 15 (previously applied to a stalagmite) and RAN 17 do not appear to be suitable for temperature calibration in lacustrine environments. We propose a novel temperature proxy (RIN 17 , ratio of iso to normal C 17 3-OH-FA) for lake environments. These field-based correlations demonstrate that the physiological response of Gram-negative bacterial cell membranes to external environmental changes are recorded in lake sediments on a large regional scale. This further highlights the potential use of bacterial 3-OH-FAs as proxies for paleoclimate reconstruction in both aquatic and terrestrial environments. [ABSTRACT FROM AUTHOR]

• The LDI proxy is calibrated for the tropics using South China Sea surface sediments. • LDI values are negatively correlated with SST at temperatures above 27 °C. • This new LDI calibration is well correlated with archaeal lipid temperature proxies. The Long-chain Diol Index (LDI) is a palaeotemperature proxy applied to marine sediments up to Miocene in age. Recent studies have revealed that the LDI-inferred temperature yields significant errors in waters >27 °C. This necessitates further assessment of the performance of the LDI proxy in high-temperature marine regimes. For this purpose, we collected 58 surface sediment samples from the tropical South China Sea (SCS), where annual sea surface temperature (SST) ranges from 24 °C to 29 °C. The original LDI calibration yields temperatures <27 °C for these samples, and the residual between the LDI-inferred temperature and the measured SST (ΔT) increases (to >4 °C) as SST increases. This ΔT, or mis-calibration, is significantly correlated with the measured SST as the temperature increases above 27 °C. This relationship also exists in sediment trap data. We therefore re-calibrated the LDI-inferred temperature to generate a new relationship that can be applied to environments with SST >27 °C, which is beyond the range of the original LDI proxy. Both the recalibrated LDI and, for comparison, archaeal lipid temperature proxies were applied in the high-temperature SCS; the improved correlation shows the LDI recalibration could be applied to palaeo-records from tropical oceans. [ABSTRACT FROM AUTHOR]

• Distinctive distributions of 3-OH-FAs in marine surface sediments vs soils. • 16S rRNA analysis shows distinct bacterial populations in marine sediments. • We propose RAN 13 as a new proxy for sea surface temperature reconstruction. 3-Hydroxy fatty acids (3-OH-FAs), derived from Gram-negative bacterial outer membranes, have received recent attention for their potential as new terrestrial pH and temperature proxies for palaeoclimate studies. However, it is not known whether 3-OH-FA based proxies can be developed and applied to the marine environment. Here we analyze 3-OH-FAs from a latitudinal transect of marine surface sediments from the North Pacific Ocean (12°N to 61°N with a annual mean sea surface temperature (SST) range of 28.1–1.3 °C). The results show that distributions of 3-OH-FAs in marine sediments yield overall higher abundances of anteiso 3-OH-FA homologues compared to soils. Furthermore, 16S rRNA gene sequencing of the marine sediments and soils shows the Gram-negative bacterial community is dominated by Proteobacteria (ca. 94%) at the phylum level. In contrast, in regional soils the Gram-negative bacterial community is more diverse with significant contributions from Proteobacteria (ca. 50%), Acidobacteria (ca. 24%), Verrucomicrobia (6%), Bacteroidetes (6%) and other phyla. These distinct genomic and molecular differences suggest distinctly different aggregate compositions of bacteria that produce 3-OH-FAs in the marine realm vs soils. Moreover, we find that the ratio of anteiso to normal C 13 3-OH-FA (RAN 13) measured in surface sediments is highly correlated with annual mean SST throughout the temperature transect. When applied to a short sediment core from the East China Sea, the SST changes reconstructed by the RAN 13 proxy are comparable to instrumental SST data. These findings demonstrate that RAN 13 and potentially other, so far undiscovered, proxies based on 3-OH-FAs have potential for environmental and palaeoclimate applications in marine environments. [ABSTRACT FROM AUTHOR]