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The species–time relationship (STR) describes how the species richness of a community increases with the time span over which the community is observed. This pattern has numerous implications for both theory and conservation in much the same way as the species–area relationship (SAR). However, the STR has received much less attention and to date only a handful of papers have been published on the pattern. Here we gather together 984 community time-series, representing 15 study areas and nine taxonomic groups, and evaluate their STRs in order to assess the generality of the STR, its consistency across ecosystems and taxonomic groups, its functional form, and its relationship to local species richness. In general, STRs were surprisingly similar across major taxonomic groups and ecosystem types. STRs tended to be well fit by both power and logarithmic functions, and power function exponents typically ranged between 0.2 and 0.4. Communities with high richness tended to have lower STR exponents, suggesting that factors increasing richness may simultaneously decrease turnover in ecological systems. Our results suggest that the STR is as fundamental an ecological pattern as the SAR, and raise questions about the general processes underlying this pattern. They also highlight the dynamic nature of most species assemblages, and the need to incorporate time scale in both basic and applied research on species richness patterns. [ABSTRACT FROM AUTHOR]

In this paper we investigate ecological flow networks via graph theory in search of the real sequential chains through which energy passes from producers to consumers in complex food webs. We obtain such fundamental pathways by identifying strongly connected components (SCCs), subsystems that groups species that take part in cycling, and performing topological sorting on the acyclic graphs that are obtained. Topological sorting identifies preferential directions for energy to flow from sources to sinks, while recycling remains confined within each SCC. Resolving food web networks for SCC highlights the possibility that compartments can be found in ecosystems, but this does not seem a general rule. The four aquatic food webs described in detail show a rather clear subdivision between benthic and pelagic subcommunities, a result that is discussed in the light of other studies. Should further research confirm these results, new insight into the way ecosystems use energy will be provided, with implications on cycling, reciprocal dependency of variables and indirect effects. [ABSTRACT FROM AUTHOR]

Over evolutionary time, the number of species in a community reflects the balance between the rate of speciation and the rate of extinction. Over shorter time-scales local species richness is also affected by how often species move into and out of the local community. These processes are at the heart of Hubbell's ‘unified neutral theory of biodiversity’ ( Hubbell 2001 ). Hubbell's spatially implicit, dispersal-limited neutral model is the most widely used of the many implementations of neutral theory and it provides an estimate of the rate of speciation in a metacommunity (if metacommunity size is known) and the rate at which species migrate into the local community from the wider metacommunity. Recently, this neutral model has been used to compare rates of speciation and migration in the species-rich fynbos of South Africa and in neotropical forests. Here we use new analytical methods for estimating the neutral model's parameters to infer speciation and dispersal rates for three sites in species-rich sclerophyll shrublands (equivalent to fynbos) in Western Australia (WA). Our estimates suggest that WA shrublands are intermediate between fynbos and tropical rainforest in terms of speciation and dispersal. Although a weak test, the model predicts species abundance distributions and species accumulation curves similar to those observed at the three sites. The neutral model's predictions also remain plausible when confronted with independent data describing: (1) known edaphic relationships between sites, (2) estimates of metacommunity species richness and (3) rates of speciation among resprouters and nonsprouters. Two of the site pairs, however, show species turnovers significantly different from those predicted by the spatially implicit form of the neutral model that we use. This suggests that non-neutral processes, in this case probably edaphic specialisation, are important in the WA shrubland metacommunity. The neutral model predicts similar rates of speciation in resprouter and sprouter taxa, a finding supported by recent molecular phylogenies. Finally, when converted into temporally scaled speciation rates and species longevities, the estimates produced by the neutral model seem implausible. The apparent departure from neutrality in the turnover of species between some sites and the implausible temporal dynamics may be due to the particular model chosen and does not reduce the significance of our other results, which confirm that local dispersal limitation, coupled with broader scale edaphic fidelity, combine to structure this biodiverse metacommunity. [ABSTRACT FROM AUTHOR]

The loss of a predator from an ecological community can cause large changes in community structure and ecosystem processes, or have very little consequence for the remaining species and ecosystem. Understanding when and why the loss of a predator causes large changes in community structure and ecosystem processes is critical for understanding the functional consequences of biodiversity loss. We used experimental microbial communities to investigate how the removal of a large generalist predator affected the extinction frequency, population abundance and total biomass of its prey. We removed this predator in the presence or absence of an alternative, more specialist, predator in order to determine whether the specialist predator affected the outcome of the initial species removal. Removal of the large generalist predator altered some species’ populations but many were unaffected and no secondary extinctions were observed. The specialist predator, though rare, altered the response of the prey community to the removal of the large generalist predator. In the absence of the specialist predator, the effects of the removal were only measurable at the level of individual species. However, when the specialist predator was present, the removal of the large generalist predator affected the total biomass of prey species. The results demonstrate that the effect of species loss from high trophic levels may be very context-dependent, as rare species can have disproportionately large effects in food webs. [ABSTRACT FROM AUTHOR]

We used an individual-based spatially-explicit model to assess the role of facilitation and plant strategies in shaping the ‘community biomass–species richness’ relationship. Facilitation had few impacts on community's richness under both the most benign (high community biomass) and the most severe (low community biomass) environments where its intensity was weak. From medium to high environmental severity, facilitation increased community richness, because all plant strategies were facilitated. In contrast, from low to medium environmental severity facilitation decreased community richness, because only the most competitive species were facilitated, which induced a decrease in the richness of the stress-tolerant species overwhelming the increase in richness of the competitive species. Above all, our simulations show how ‘strategy-dependent’ interactions among species combine to shape the humped-back biomass–species richness relationship. It also demonstrates that facilitative effects might have long-term negative effects on species richness, which result is not included in current facilitation models. [ABSTRACT FROM AUTHOR]

Diversity in one group of species or genotypes is often correlated with diversity in a second group – prominent examples including native vs exotic species, and genetic diversity in a focal species vs species diversity in the rest of the community. I used simulation models to investigate the roles of competition and facilitation among species or genotypes in creating diversity–diversity relationships, with a focus on facilitation, which has received little theoretical attention. When competitive interactions dominate, increasing diversity in one group reduces diversity in the second group via filling of available niche space. Facilitation can create positive diversity–diversity relationships via a sampling effect, whereby a strong facilitator of the second group is more likely to be present as diversity increases in the first group, and also via one group acting as a source of biotic heterogeneity (i.e. diversifying selection) on the second group. However, the biotic heterogeneity effect is expected only under restricted conditions – with asymmetric facilitation, only during a transient period, or only over a small range of species diversity levels – and therefore seems unlikely to operate within trophic levels in natural communities. More generally, the simultaneous operation of competition and facilitation results in several different diversity–diversity relationships and underlying mechanisms. The results clarify the potential roles of positive and negative interactions in creating diversity–diversity relationships, and in determining the outcome of community dynamics in general. This study also highlights some important difficulties in incorporating facilitation into ecological theory for communities with many species. [ABSTRACT FROM AUTHOR]

The lack of predictability in litter-mix studies may result from the low correlation between species number and the traits that drive the processes under observation. From the standpoint of litter-quality-dependent ecological processes, we propose that litter chemical qualities are functional traits and introduce a multivariate index of chemical diversity (CDQ) based on Rao's quadratic entropy to describe the compositional heterogeneity of litter and foliar mixtures. Using published data from temperate and tropical forest systems to illustrate the relationship between species richness and chemical diversity, we show the variation of chemical diversity based on profiles of total nutrient concentrations (N, P, K, Ca and Mg) with species richness. We discuss how this behavior may explain the idiosyncratic responses exhibited in litter-mix experiments and how it may contribute to the observed dominance of species identity over species diversity. As a summary of resource heterogeneity relevant to detritivore and microbial processes, the chemical diversity index is potentially a better predictor of diversity effects on nutrient dynamics than species richness. Finally, we propose the use of infrared spectroscopy techniques for a rapid and more comprehensive determination of foliar and litter chemical composition to provide a more information-rich index. [ABSTRACT FROM AUTHOR]

There has been much debate about the relative merits of single-species vs ecosystem-oriented research for conservation. This debate has become increasingly important in recent times as resource managers and policy makers in some jurisdictions focus on ecosystem-level problems. We highlight the potential strengths and limitations of both kinds of research, discuss their complementarity and highlight problems that may arise where competition occurs between the two kinds of research. While a combination of approaches is ideal, a scarcity of funding, time, and expertise means it is impossible to study and manage each species, ecological process, or ecological pattern separately. Making decisions about priorities for the kinds of research, priorities for the kinds of conservation management, and associated allocation of scarce funds is a non-trivial task. We argue for an approach whereby limited resources for conservation research are targeted at projects most likely to close important knowledge gaps, while also promoting ongoing synergies between single-species and ecosystem-oriented research. [ABSTRACT FROM AUTHOR]

Since the introduction of the term ecosystem engineering by Jones et al. many studies have focused on positive, facilitative interactions caused by ecosystem engineering. Much less emphasis has been placed on the role of ecosystem engineering in causing negative interactions between species. Here, we report on negative interactions between two well known ecosystem engineers occurring at the interface of salt marsh and intertidal flat (i.e. common cordgrass Spartina anglica and lugworms Arenicola marina), via modification of their joint habitat. A field survey indicated that, although both species share a common habitat, they rarely co-occur on small spatial scales (<1 m). Experiments in the field and in mesocosms reveal that establishment of small Spartina plants is inhibited in Arenicola-dominated patches because of low sediment stability induced by the lugworms. In turn, Arenicola establishment in Spartina-dominated patches is limited by high silt content, compactness and dense rooting of the sediment caused by Spartina presence. Our results show that negative interactions by modification of the environment can result in rapid mutual exclusion, particularly if adverse effects of habitat modification are strong and if both species exhibit positive feedbacks. This illustrates the potential for negative interactions via the environment to affect community composition. [ABSTRACT FROM AUTHOR]

The article presents a discussion on alternative stable states (ASS) in ecology. It argues the theories of R. K. Didham and colleagues regarding ASS of ecological communities. It also cites the three major criteria for ASS such as it must be shown to occur in the same environment, the perturbation which causes the change in species composition must be applied as a pulse and must not cause a prolonged change in the environment, and it must be self sustaining. ASS has been discussed mainly for semi-arid rangelands.

Hubbell's neutral theory of biodiversity has generated much debate over the need for niches to explain biodiversity patterns. Discussion of the theory has focused on its neutrality assumption, i.e. the functional equivalence of species in competition and dispersal. Almost no attention has been paid to another critical aspect of the theory, the assumptions on the nature of the speciation process. In the standard version of the neutral theory each individual has a fixed probability to speciate. Hence, the speciation rate of a species is directly proportional to its abundance in the metacommunity. We argue that this assumption is not realistic for most speciation modes because speciation is an emergent property of complex processes at larger spatial and temporal scales and, consequently, speciation rate can either increase or decrease with abundance. Accordingly, the assumption that speciation rate is independent of abundance (each species has a fixed probability to speciate) is a more natural starting point in a neutral theory of biodiversity. Here we present a neutral model based on this assumption and we confront this new model to 20 large data sets of tree communities, expecting the new model to fit the data better than Hubbell's original model. We find, however, that the data sets are much better fitted by Hubbell's original model. This implies that species abundance data can discriminate between different modes of speciation, or, stated otherwise, that the mode of speciation has a large impact on the species abundance distribution. Our model analysis points out new ways to study how biodiversity patterns are shaped by the interplay between evolutionary processes (speciation, extinction) and ecological processes (competition, dispersal). [ABSTRACT FROM AUTHOR]

We investigated if dragonfly larvae community composition and species abundance curves are sensitive to variation in predation intensity, and whether the fit to a particular niche partitioning model could be used to make inferences about mechanisms structuring communities. The approach taken was to compare communities in lakes either having or lacking fish predation. Dragonfly species classified as active, strongly dominated the dragonfly communities in fishless lakes, and low active species dominated fishless lakes. As activity level is known to correlate with susceptibility to fish predation this indicates that these communities are structured by fish predation. Fitting relative abundance data to five niche partitioning models showed that the same model fitted data from both types of habitats (fish/no fish). This means that the observed differences in relative abundances were substitutive, i.e. the relative abundance of a rank stayed constant, even though the identity of the species having this rank changed. The best fit to data from both types of lakes was found for the random assortment model, which is usually interpreted as an indication that the community is not structured by within-guild interactions. This interpretation for fishless lakes did not seem to agree with other community measures (i.e. lowered diversity and evenness and no relationship between species richness and dragonfly biomass), which indicate that the community is structured by within-guild interactions. Moreover, a detail in the fitting procedure, the number of species included in the analysis, affected which model that fitted data best. Thus, we question if fitting niche partitioning models to data can provide mechanistic understanding of how resources are partitioned in natural communities. [ABSTRACT FROM AUTHOR]

Ecosystem resistance to a single stressor relies on tolerant species that can compensate for sensitive competitors and maintain ecosystem processes, such as primary production. We hypothesize that resistance to additional stressors depends increasingly on species tolerances being positively correlated (i.e. positive species co-tolerance). Initial exposure to a stressor combined with positive species co-tolerance should reduce the impacts of other stressors, which we term stress-induced community tolerance. In contrast, negative species co-tolerance is expected to result in additional stressors having pronounced additive or synergistic impacts on biologically impoverished functional groups, which we term stress-induced community sensitivity. Therefore, the sign and strength of the correlation between species sensitivities to multiple stressors must be considered when predicting the impacts of global change on ecosystem functioning as mediated by changes in biodiversity. [ABSTRACT FROM AUTHOR]

Ecological communities change over time and space, and ecologists have long suggested that biodiversity might influence the rate of change. Here we cast new light on this question by demonstrating statistical covariation between species richness and the variability of species abundances and identities within a community (compositional variability). We provide a new analytical framework for several previously published measures of ecosystem functioning and compositional variability. We derive three related variances, each of which measures compositional variability due solely to stochastic sampling processes. Our analyses show that whether relations between species richness and compositional variability are positive, negative or zero, depends on two factors. Not only does the particular variance used affect the relation, but, more importantly, the underlying determinants of species richness can strongly affect the stochastic relations between species richness and compositional variability. This analysis makes clear for the first time how species richness should correlate with important measures of community variability, even in the absence of systematic processes. [ABSTRACT FROM AUTHOR]

Focuses on the search for important species in ecological networks. Need for objective approaches for characterizing the importance of species; Critique of network anatomical studies; Assessment of the influence of a species on other members of the community.