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Summary: CO2 release in the light (RL) and its presumed source, oxidative pentose phosphate pathways, were found to be insensitive to CO2 concentration.The oxidative pentose phosphate pathways form glucose 6‐phosphate (G6P) shunts that bypass the nonoxidative pentose phosphate reactions of the Calvin–Benson cycle. Using adenosine diphosphate glucose and uridine diphosphate glucose as proxies for labeling of G6P in the stroma and cytosol respectively, it was found that only the cytosolic shunt was active.Uridine diphosphate glucose, a proxy for cytosolic G6P, and 6‐phosphogluconate (6PG) were significantly less labeled than Calvin–Benson cycle intermediates in the light. But ADP glucose, a proxy for stromal G6P, is labeled to the same degree as Calvin–Benson cycle intermediates and much greater than 6PG. A metabolically inert pool of sedoheptulose bisphosphate can slowly equilibrate keeping the label in sedoheptulose lower than in other stromal metabolites. Finally, phosphorylation of fructose 6‐phosphate (F6P) in the cytosol can allow some unlabeled carbon in cytosolic F6P to dilute label in phosphenolpyruvate.The results clearly show that there is oxidative pentose phosphate pathway activity in the cytosol that provides a shunt around the nonoxidative pentose phosphate pathway reactions of the Calvin–Benson cycle and is not strongly CO2‐sensitive. [ABSTRACT FROM AUTHOR]

Summary: Shoot‐level emissions of aerobically produced methane (CH4) may be an overlooked source of tree‐derived CH4, but insufficient understanding of the interactions between their environmental and physiological drivers still prevents the reliable upscaling of canopy CH4 fluxes.We utilised a novel automated chamber system to continuously measure CH4 fluxes from the shoots of Pinus sylvestris (Scots pine) saplings under drought to investigate how canopy CH4 fluxes respond to the drought‐induced alterations in their physiological processes and to isolate the shoot‐level production of CH4 from soil‐derived transport and photosynthesis.We found that aerobic CH4 emissions are not affected by the drought‐induced stress, changes in physiological processes, or decrease in photosynthesis. Instead, these emissions vary on short temporal scales with environmental drivers such as temperature, suggesting that they result from abiotic degradation of plant compounds.Our study shows that aerobic CH4 emissions from foliage are distinct from photosynthesis‐related processes. Thus, instead of photosynthesis rates, it is more reliable to construct regional and global estimates for the aerobic CH4 emission based on regional differences in foliage biomass and climate, also accounting for short‐term variations of weather variables such as air temperature and solar radiation. [ABSTRACT FROM AUTHOR]

Summary Aerosols could significantly influence ecosystem carbon and water fluxes, potentially altering their interconnected dynamics, typically characterized by water‐use efficiency (WUE). However, our understanding of the underlying ecophysiological mechanisms remains limited due to insufficient field observations. We conducted 4‐yr measurements of leaf photosynthesis and transpiration, as well as 3‐yr measurements of stem growth (SG) and sap flow of poplar trees exposed to natural aerosol fluctuation, to elucidate aerosol's impact on plant WUE. We found that aerosol improved sun leaf WUE mainly because a sharp decline in photosynthetically active radiation (PAR) inhibited its transpiration, while photosynthesis was less affected, as the negative effect induced by declined PAR was offset by the positive effect induced by low leaf vapor pressure deficit (VPDleaf). Conversely, diffuse radiation fertilization (DRF) effect stimulated shade leaf photosynthesis with minimal impact on transpiration, leading to an improved WUE. The responses were further verified by a strong DRF on SG and a decrease in sap flow due to the suppresses in total radiation and VPD. Our field observations indicate that, contrary to the commonly assumed coupling response, carbon uptake and water use exhibited dissimilar reactions to aerosol pollution, ultimately enhancing WUE at the leaf and canopy level. [ABSTRACT FROM AUTHOR]

Summary Elevated air temperature (Tair) and vapour pressure deficit (VPDair) significantly influence plant functioning, yet their relative impacts are difficult to disentangle. We examined the effects of elevated Tair (+6°C) and VPDair (+0.7 kPa) on the growth and physiology of six tropical tree species. Saplings were grown under well‐watered conditions in climate‐controlled glasshouses for 6 months under three treatments: (1) low Tair and low VPDair, (2) high Tair and low VPDair, and (3) high Tair and high VPDair. To assess acclimation, physiological parameters were measured at a set temperature. Warm‐grown plants grown under elevated VPDair had significantly reduced stomatal conductance and increased instantaneous water use efficiency compared to plants grown under low VPDair. Photosynthetic biochemistry and thermal tolerance (Tcrit) were unaffected by VPDair, but elevated Tair caused Jmax25 to decrease and Tcrit to increase. Sapling biomass accumulation for all species responded positively to an increase in Tair, but elevated VPDair limited growth. This study shows that stomatal limitation caused by even moderate increases in VPDair can decrease productivity and growth rates in tropical species independently from Tair and has important implications for modelling the impacts of climate change on tropical forests. [ABSTRACT FROM AUTHOR]

Summary The coordinated interspecific variation in leaf traits and leaf lifespan is known as the leaf economic spectrum (LES). The limitation of CO2 diffusion to chloroplasts within the lamina is significant in C3 photosynthesis, resulting in a shortage of CO2 for Rubisco. Although Rubisco CO2/O2 specificity (SC/O) should be adaptively adjusted in response to the interspecific variation in CO2 concentrations [CO2] associated with Rubisco, SC/O variations across species along the LES remain unknown. We investigated the coordination among leaf traits, including SC/O, CO2 conductance, leaf protein content, and leaf mass area, across 23 woody C3 species coexisting on an oceanic island through phylogenetic correlation analyses. A high SC/O indicates a high CO2 specificity of Rubisco. SC/O was negatively correlated with [CO2] at Rubisco and total CO2 conductance within lamina, while it was positively correlated with leaf protein across species, regardless of phylogenetic constraint. A simulation analysis shows that the optimal SC/O for maximizing photosynthesis depends on both [CO2] at Rubisco sites and leaf protein per unit leaf area. SC/O is a key parameter along the LES axis and is crucial for maximizing photosynthesis across species and the adaptation of woody plants. [ABSTRACT FROM AUTHOR]

Summary As temperature rises, net carbon uptake in tropical forests decreases, but the underlying mechanisms are not well understood. High temperatures can limit photosynthesis directly, for example by reducing biochemical capacity, or indirectly through rising vapor pressure deficit (VPD) causing stomatal closure. To explore the independent effects of temperature and VPD on photosynthesis we analyzed photosynthesis data from the upper canopies of two tropical forests in Panama with Generalized Additive Models. Stomatal conductance and photosynthesis consistently decreased with increasing VPD, and statistically accounting for VPD increased the optimum temperature of photosynthesis (Topt) of trees from a VPD‐confounded apparent Topt of c. 30–31°C to a VPD‐independent Topt of c. 33–36°C, while for lianas no VPD‐independent Topt was reached within the measured temperature range. Trees and lianas exhibited similar temperature and VPD responses in both forests, despite 1500 mm difference in mean annual rainfall. Over ecologically relevant temperature ranges, photosynthesis in tropical forests is largely limited by indirect effects of warming, through changes in VPD, not by direct warming effects of photosynthetic biochemistry. Failing to account for VPD when determining Topt misattributes the underlying causal mechanism and thereby hinders the advancement of mechanistic understanding of global warming effects on tropical forest carbon dynamics. [ABSTRACT FROM AUTHOR]

Summary Diatoms are a diverse group of phytoplankton usually dominating areas characterized by rapidly shifting light conditions. Because of their high growth rates and interesting biochemical profile, their biomass is considered for various commercial applications. This study aimed at identifying strains with superior growth in a photobioreactor (PBR) by screening the natural intraspecific diversity of ecotypes isolated from different habitats. We investigated the effect of PBR light fluctuating on a millisecond scale (FL, simulating the light in a PBR) on 19 ecotypes of the diatom Skeletonema marinoi isolated from the North Sea–Baltic Sea area. We compare growth, pigment ratios, phylogeny, photo‐physiological variables and photoacclimation strategies between all strains and perform qPCR and absorption spectra analysis on a subset of strains. Our results show that the ecotypes responded differently to FL, and have contrasting photo‐physiological and photoprotective strategies. The strains from Kattegat performed better in FL, and shared common photoacclimation and photoprotection strategies that are the results of adaptation to the specific light climate of the Kattegat area. The strains that performed better with FL conditions had a high light (HL)‐acclimated phenotype coupled with unique nonphotochemical quenching features. Based on their characteristics, three strains were identified as good candidates for growth in PBRs. [ABSTRACT FROM AUTHOR]

Summary Some cyanobacteria can grow photoautotrophically or photomixotrophically by using simultaneously CO2 and glucose. The switch between these trophic modes and the role of glycogen, their main carbon storage macromolecule, was investigated. We analysed the effect of glucose addition on the physiology, metabolic and photosynthetic state of Synechocystis sp. PCC 6803 and mutants lacking phosphoglucomutase and ADP‐glucose pyrophosphorylase, with limitations in glycogen synthesis. Glycogen acted as a metabolic buffer: glucose addition increased growth and glycogen reserves in the wild‐type (WT), but arrested growth in the glycogen synthesis mutants. Already 30 min after glucose addition, metabolites from the Calvin–Benson–Bassham cycle and the oxidative pentose phosphate shunt increased threefold more in the glycogen synthesis mutants than the WT. These alterations substantially affected the photosynthetic performance of the glycogen synthesis mutants, as O2 evolution and CO2 uptake were both impaired. We conclude that glycogen synthesis is essential during transitions to photomixotrophy to avoid metabolic imbalance that induces inhibition of electron transfer from PSII and subsequently accumulation of reactive oxygen species, loss of PSII core proteins, and cell death. Our study lays foundations for optimising photomixotrophy‐based biotechnologies through understanding the coordination of the crosstalk between photosynthetic electron transport and metabolism. [ABSTRACT FROM AUTHOR]

Summary: Chloroplasts are the result of endosymbiosis of cyanobacterial organisms with proto‐eukaryotes. The psbA, psbD and psbO genes are present in all oxyphototrophs and encode the D1/D2 proteins of photosystem II (PSII) and PsbO, respectively. PsbO is a peripheral protein that stabilizes the O2‐evolving complex in PSII. Of these genes, psbA and psbD remained in the chloroplastic genome, while psbO was transferred to the nucleus.The genomes of selected cyanobacteria, chloroplasts and cyanophages carrying psbA and psbD, respectively, were analysed.The highest density of genes and coding sequences (CDSs) was estimated for the genomes of cyanophages, cyanobacteria and chloroplasts. The synonymous mutation rate (rS) of psbA and psbD in chloroplasts remained almost unchanged and is lower than that of psbO.The results indicate that the decreasing genome size in chloroplasts is more similar to the genome reduction observed in contemporary endosymbiotic organisms than in streamlined genomes of free‐living cyanobacteria. The rS of atpA, which encodes the α‐subunit of ATP synthase in chloroplasts, suggests that psbA and psbD, and to a lesser extent psbO, are ancient and conservative and arose early in the evolution of oxygenic photosynthesis. The role of cyanophages in the evolution of oxyphototrophs and chloroplastic genomes is discussed. [ABSTRACT FROM AUTHOR]

Summary: A conceptual understanding on how the vegetation's carbon (C) balance is determined by source activity and sink demand is important to predict its C uptake and sequestration potential now and in the future. We have gathered trajectories of photosynthesis and growth as a function of environmental conditions described in the literature and compared them with current concepts of source and sink control. There is no clear evidence for pure source or sink control of the C balance, which contradicts recent hypotheses. Using model scenarios, we show how legacy effects via structural and functional traits and antecedent environmental conditions can alter the plant's carbon balance. We, thus, combined the concept of short‐term source–sink coordination with long‐term environmentally driven legacy effects that dynamically acclimate structural and functional traits over time. These acclimated traits feedback on the sensitivity of source and sink activity and thus change the plant physiological responses to environmental conditions. We postulate a whole plant C‐coordination system that is primarily driven by stomatal optimization of growth to avoid a C source–sink mismatch. Therefore, we anticipate that C sequestration of forest ecosystems under future climate conditions will largely follow optimality principles that balance water and carbon resources to maximize growth in the long term. [ABSTRACT FROM AUTHOR]

Summary: Plants with Crassulacean acid metabolism (CAM) have long been associated with a specialized anatomy, including succulence and thick photosynthetic tissues. Firm, quantitative boundaries between non‐CAM and CAM plants have yet to be established – if they indeed exist.Using novel computer vision software to measure anatomy, we combined new measurements with published data across flowering plants. We then used machine learning and phylogenetic comparative methods to investigate relationships between CAM and anatomy.We found significant differences in photosynthetic tissue anatomy between plants with differing CAM phenotypes. Machine learning‐based classification was over 95% accurate in differentiating CAM from non‐CAM anatomy, and had over 70% recall of distinct CAM phenotypes. Phylogenetic least squares regression and threshold analyses revealed that CAM evolution was significantly correlated with increased mesophyll cell size, thicker leaves, and decreased intercellular airspace.Our findings suggest that machine learning may be used to aid the discovery of new CAM species and that the evolutionary trajectory from non‐CAM to strong, obligate CAM requires continual anatomical specialization. [ABSTRACT FROM AUTHOR]

Summary Contemporary climate change will push many tree species into conditions that are outside their current climate envelopes. Using the Eucalyptus genus as a model, we addressed whether species with narrower geographical distributions show constrained ability to cope with warming relative to species with wider distributions, and whether this ability differs among species from tropical and temperate climates. We grew seedlings of widely and narrowly distributed Eucalyptus species from temperate and tropical Australia in a glasshouse under two temperature regimes: the summer temperature at seed origin and +3.5°C. We measured physical traits and leaf‐level gas exchange to assess warming influences on growth rates, allocation patterns, and physiological acclimation capacity. Warming generally stimulated growth, such that higher relative growth rates early in development placed seedlings on a trajectory of greater mass accumulation. The growth enhancement under warming was larger among widely than narrowly distributed species and among temperate rather than tropical provenances. The differential growth enhancement was primarily attributable to leaf area production and adjustments of specific leaf area. Our results suggest that tree species, including those with climate envelopes that will be exceeded by contemporary climate warming, possess capacity to physiologically acclimate but may have varying ability to adjust morphology. [ABSTRACT FROM AUTHOR]

Summary Climate change is simultaneously increasing carbon dioxide concentrations ([CO2]) and temperature. These factors could interact to influence plant physiology and performance. Alternatively, increased [CO2] may offset costs associated with elevated temperatures. Furthermore, the interaction between elevated temperature and [CO2] may differentially affect populations from along an elevational gradient and disrupt local adaptation. We conducted a multifactorial growth chamber experiment to examine the interactive effects of temperature and [CO2] on fitness and ecophysiology of diverse accessions of Boechera stricta (Brassicaceae) sourced from a broad elevational gradient in Colorado. We tested whether increased [CO2] would enhance photosynthesis across accessions, and whether warmer conditions would depress the fitness of high‐elevation accessions owing to steep reductions in temperature with increasing elevation in this system. Elevational clines in [CO2] are not as evident, making it challenging to predict how locally adapted ecotypes will respond to elevated [CO2]. This experiment revealed that elevated [CO2] increased photosynthesis and intrinsic water use efficiency across all accessions. However, these instantaneous responses to treatments did not translate to changes in fitness. Instead, increased temperatures reduced the probability of reproduction for all accessions. Elevated [CO2] and increased temperatures interacted to shift the adaptive landscape, favoring lower elevation accessions for the probability of survival and fecundity. Our results suggest that elevated temperatures and [CO2] associated with climate change could have severe negative consequences, especially for high‐elevation populations. [ABSTRACT FROM AUTHOR]

Summary: Theoretically, the PEP‐CK C4 subtype has a higher quantum yield of CO2 assimilation (ΦCO2) than NADP‐ME or NAD‐ME subtypes because ATP required for operating the CO2‐concentrating mechanism is believed to mostly come from the mitochondrial electron transport chain (mETC). However, reported ΦCO2 is not higher in PEP‐CK than in the other subtypes. We hypothesise, more photorespiration, associated with higher leakiness and O2 evolution in bundle‐sheath (BS) cells, cancels out energetic advantages in PEP‐CK species.Nine species (two to four species per subtype) were evaluated by gas exchange, chlorophyll fluorescence, and two‐photon microscopy to estimate the BS conductance (gbs) and leakiness using a biochemical model.Average gbs estimates were 2.9, 4.8, and 5.0 mmol m−2 s−1 bar−1, and leakiness values were 0.129, 0.179, and 0.180, in NADP‐ME, NAD‐ME, and PEP‐CK species, respectively. The BS CO2 level was somewhat higher, O2 level was marginally lower, and thus, photorespiratory loss was slightly lower, in NADP‐ME than in NAD‐ME and PEP‐CK species. Differences in these parameters existed among species within a subtype, and gbs was co‐determined by biochemical decarboxylating sites and anatomical characteristics.Our hypothesis and results partially explain variations in observed ΦCO2, but suggest that PEP‐CK species probably use less ATP from mETC than classically defined PEP‐CK mechanisms. [ABSTRACT FROM AUTHOR]

Summary: The phosphorylation of photosystem II (PSII) and its antenna (LHCII) proteins has been studied, and its involvement in state transitions and PSII repair is known. Yet, little is known about the phosphorylation of photosystem I (PSI) and its antenna (LHCI) proteins.Here, we applied proteomics analysis to generate a map of the phosphorylation sites of the PSI–LHCI proteins in Chlorella ohadii cells that were grown under low or extreme high‐light intensities (LL and HL). Furthermore, we analyzed the content of oxidized tryptophans and PSI–LHCI protein degradation products in these cells, to estimate the light‐induced damage to PSI–LHCI.Our work revealed the phosphorylation of 17 of 22 PSI–LHCI subunits. The analyses detected the extensive phosphorylation of the LHCI subunits Lhca6 and Lhca7, which is modulated by growth light intensity. Other PSI–LHCI subunits were phosphorylated to a lesser extent, including PsaE, where molecular dynamic simulation proposed that a phosphoserine stabilizes ferredoxin binding. Additionally, we show that HL‐grown cells accumulate less oxidative damage and degradation products of PSI–LHCI proteins, compared with LL‐grown cells.The significant phosphorylation of Lhca6 and Lhca7 at the interface with other LHCI subunits suggests a physiological role during photosynthesis, possibly by altering light‐harvesting characteristics and binding of other subunits. [ABSTRACT FROM AUTHOR]

Summary Plant yields heavily depend on proper macro‐ and micronutrient supply from the soil. In the leaf cells, nutrient ions fulfill specific roles in biochemical reactions, especially photosynthesis housed in the chloroplast. Here, a well‐balanced ion homeostasis is maintained by a number of ion transport proteins embedded in the envelope and thylakoid membranes. Ten years ago, the first alkali metal transporters from the K+ EFFLUX ANTIPORTER family were discovered in the model plant Arabidopsis. Since then, our knowledge about the physiological importance of these carriers and their substrates has greatly expanded. New insights into the role of alkali ions in plastid gene expression and photoprotective mechanisms, both prerequisites for plant productivity in natural environments, were gained. The discovery of a Cl− channel in the thylakoid and several additional plastid alkali and alkali metal transport proteins have advanced the field further. Nevertheless, scientists still have long ways to go before a complete systemic understanding of the chloroplast's ion transportome will emerge. In this Tansley review, we highlight and discuss the achievements of the last decade. More importantly, we make recommendations on what areas to prioritize, so the field can reach the next milestones. One area, laid bare by our similarity‐based comparisons among phototrophs is our lack of knowledge what ion transporters are used by cyanobacteria to buffer photosynthesis fluctuations. [ABSTRACT FROM AUTHOR]

Summary: The strong covariation of temperature and vapour pressure deficit (VPD) in nature limits our understanding of the direct effects of temperature on leaf gas exchange. Stable isotopes in CO2 and H2O vapour provide mechanistic insight into physiological and biochemical processes during leaf gas exchange.We conducted combined leaf gas exchange and online isotope discrimination measurements on four common European tree species across a leaf temperature range of 5–40°C, while maintaining a constant leaf‐to‐air VPD (0.8 kPa) without soil water limitation.Above the optimum temperature for photosynthesis (30°C) under the controlled environmental conditions, stomatal conductance (gs) and net photosynthesis rate (An) decoupled across all tested species, with gs increasing but An decreasing. During this decoupling, mesophyll conductance (cell wall, plasma membrane and chloroplast membrane conductance) consistently and significantly decreased among species; however, this reduction did not lead to reductions in CO2 concentration at the chloroplast surface and stroma.We question the conventional understanding that diffusional limitations of CO2 contribute to the reduction in photosynthesis at high temperatures. We suggest that stomata and mesophyll membranes could work strategically to facilitate transpiration cooling and CO2 supply, thus alleviating heat stress on leaf photosynthetic function, albeit at the cost of reduced water‐use efficiency. [ABSTRACT FROM AUTHOR]

Summary: Photosynthetic efficiency is reduced by the dual role of Rubisco, which acts either as a carboxylase or as an oxygenase, the latter leading to photorespiration. C4 photosynthesis evolved as a carbon‐concentrating mechanism to reduce photorespiration. To engineer C4 into a C3 plant, it is essential to understand how C4 genes, such as phosphoenolpyruvate carboxylase (PEPC1), are regulated to be expressed at high levels and in a cell‐specific manner.Yeast one‐hybrid screening was used to show that OsPRI1, a rice bHLH transcription factor involved in iron homeostasis, binds to the Setaria viridis PEPC1 promoter. This promoter drives mesophyll‐specific gene expression in rice. The role of OsPRI1 in planta was characterized using a rice line harbouring SvPEPC1pro::GUS.We show that OsPRI1 activates the S. viridis PEPC1 promoter by binding to an N‐box in the proximal promoter, and that GUS activity is highly reduced in SvPEPC1pro::GUS lines when OsPRI1 is mutated. Cross‐species comparisons showed that the SvPRI1 homolog binds to the SvPEPC1 promoter but the maize ZmPRI1 does not bind to the ZmPEPC1 promoter.Our results suggest that elements of the iron homeostasis pathway were co‐opted to regulate PEPC1 gene expression during the evolution of some but not all C4 species. [ABSTRACT FROM AUTHOR]

Summary: The kinetic properties of Rubisco, the most important carbon‐fixing enzyme, have been assessed in a small fraction of the estimated existing biodiversity of photosynthetic organisms. Until recently, one of the most significant gaps of knowledge in Rubisco kinetics was marine macrophytes, an ecologically relevant group including brown (Ochrophyta), red (Rhodophyta) and green (Chlorophyta) macroalgae and seagrasses (Streptophyta). These organisms express various Rubisco types and predominantly possess CO2‐concentrating mechanisms (CCMs), which facilitate the use of bicarbonate for photosynthesis. Since bicarbonate is the most abundant form of dissolved inorganic carbon in seawater, CCMs allow marine macrophytes to overcome the slow gas diffusion and low CO2 availability in this environment. The present review aims to compile and integrate recent findings on the biochemical diversity of Rubisco and CCMs in the main groups of marine macrophytes. The Rubisco kinetic data provided demonstrate a more relaxed relationship among catalytic parameters than previously reported, uncovering a variability in Rubisco catalysis that has been hidden by a bias in the literature towards terrestrial vascular plants. The compiled data indicate the existence of convergent evolution between Rubisco and biophysical CCMs across the polyphyletic groups of marine macrophytes and suggest a potential role for oxygen in shaping such relationship. [ABSTRACT FROM AUTHOR]

Summary: Adaptations of plants to phosphorus (P) deficiency include reduced investment of leaf P in storage (orthophosphates in vacuoles), nucleic acids and membrane lipids. Yet, it is unclear how these adaptations are associated with plant ecological strategies.Five leaf P fractions (orthophosphate P, Pi; metabolite P, PM; nucleic acid P, PN; lipid P, PL; and residual P, PR) were analysed alongside leaf economic traits among 35 Australian woody species from three habitats: one a high‐P basalt‐derived soil and two low‐P sandstone‐derived soils, one undisturbed and one disturbed by human activities with artificial P inputs.Species at the undisturbed low‐P site generally exhibited lower concentrations of total leaf P ([Ptotal]), primarily associated with lower concentrations of Pi, and PN. The relative allocation of P to each fraction varied little among sites, except that higher PL per [Ptotal] (rPL) was recorded at the undisturbed low‐P site than at the high‐P site. This higher rPL, reflecting relative allocation to membranes, was primarily associated with lower concentrations of leaf nitrogen at the undisturbed low‐P site than at the high‐P site.Associations between leaf P fractions and leaf nitrogen may provide a basis for understanding the variation in plant ecological strategies dependent on soil P availability. [ABSTRACT FROM AUTHOR]

Summary: We present the Fast Assimilation‐Temperature Response (FAsTeR) method, a new method for measuring plant assimilation‐temperature (AT) response that reduces measurement time and increases data density compared with conventional methods.The FAsTeR method subjects plant leaves to a linearly increasing temperature ramp while taking rapid, nonequilibrium measurements of gas exchange variables. Two postprocessing steps are employed to correct measured assimilation rates for nonequilibrium effects and sensor calibration drift. Results obtained with the new method are compared with those from two conventional stepwise methods.Our new method accurately reproduces results obtained from conventional methods, reduces measurement time by a factor of c. 3.3 (from c. 90 to 27 min), and increases data density by a factor of c. 55 (from c. 10 to c. 550 observations). Simulation results demonstrate that increased data density substantially improves confidence in parameter estimates and drastically reduces the influence of noise.By improving measurement speed and data density, the FAsTeR method enables users to ask fundamentally new kinds of ecological and physiological questions, expediting data collection in short‐field campaigns, and improving the representativeness of data across species in the literature. [ABSTRACT FROM AUTHOR]

Summary: Marine phytoplankton can interchange trace metals in various biochemical functions, particularly under metal‐limiting conditions. Here, we investigate the stimulating and toxicity effect of chromium (Cr) on a marine Chlorophyceae Osetreococcus tauri under Fe‐replete and Fe‐deficient conditions.We determined the growth, photosynthesis, and proteome expressions of Osetreococcus tauri cultured under different Cr and Fe concentrations.In Fe‐replete conditions, the presence of Cr(VI) stimulated significantly the growth rate and the maximum yield of photochemistry of photosystem II (Fv/Fm) of the phytoplankton, while the functional absorption cross‐section of photosystem II (σPSII) did not change. Minor additions of Cr(VI) partially rescued phytoplankton growth under Fe‐limited conditions. Proteomic analysis of this alga grown in Fe‐replete normal and Fe‐replete with Cr addition media (10 μM Cr) showed that the presence of Cr significantly decreased the expression of phosphate‐transporting proteins and photosynthetic proteins, while increasing the expression of proteins related to carbon assimilation.Cr can stimulate the growth and photosynthesis of O. tauri, but the effects are dependent on both the Cr(VI) concentration and the availability of Fe. The proteomic results further suggest that Cr(VI) addition might significantly increase starch production and carbon fixation. [ABSTRACT FROM AUTHOR]

Summary: Leaf dark respiration (Rd) acclimates to environmental changes. However, the magnitude, controls and time scales of acclimation remain unclear and are inconsistently treated in ecosystem models.We hypothesized that Rd and Rubisco carboxylation capacity (Vcmax) at 25°C (Rd,25, Vcmax,25) are coordinated so that Rd,25 variations support Vcmax,25 at a level allowing full light use, with Vcmax,25 reflecting daytime conditions (for photosynthesis), and Rd,25/Vcmax,25 reflecting night‐time conditions (for starch degradation and sucrose export). We tested this hypothesis temporally using a 5‐yr warming experiment, and spatially using an extensive field‐measurement data set. We compared the results to three published alternatives: Rd,25 declines linearly with daily average prior temperature; Rd at average prior night temperatures tends towards a constant value; and Rd,25/Vcmax,25 is constant.Our hypothesis accounted for more variation in observed Rd,25 over time (R2 = 0.74) and space (R2 = 0.68) than the alternatives. Night‐time temperature dominated the seasonal time‐course of Rd, with an apparent response time scale of c. 2 wk. Vcmax dominated the spatial patterns.Our acclimation hypothesis results in a smaller increase in global Rd in response to rising CO2 and warming than is projected by the two of three alternative hypotheses, and by current models. [ABSTRACT FROM AUTHOR]

Summary: In leaves of C4 plants, the reactions of photosynthesis become restricted between two compartments. Typically, this allows accumulation of C4 acids in mesophyll (M) cells and subsequent decarboxylation in the bundle sheath (BS). In C4 grasses, proliferation of plasmodesmata between these cell types is thought to increase cell‐to‐cell connectivity to allow efficient metabolite movement. However, it is not known whether C4 dicotyledons also show this enhanced plasmodesmal connectivity and so whether this is a general requirement for C4 photosynthesis is not clear. How M and BS cells in C4 leaves become highly connected is also not known.We investigated these questions using 3D‐ and 2D‐electron microscopy on the C4 dicotyledon Gynandropsis gynandra as well as phylogenetically close C3 relatives.The M–BS interface of C4G. gynandra showed higher plasmodesmal frequency compared with closely related C3 species. Formation of these plasmodesmata was induced by light. Pharmacological agents that perturbed photosynthesis reduced the number of plasmodesmata, but this inhibitory effect could be reversed by the provision of exogenous sucrose.We conclude that enhanced formation of plasmodesmata between M and BS cells is wired to the induction of photosynthesis in C4G. gynandra. [ABSTRACT FROM AUTHOR]

Summary: Leaf day respiration (Rd) strongly influences carbon‐use efficiencies of whole plants and the global terrestrial biosphere. It has long been thought that Rd is slower than respiration in the dark at a given temperature, but measuring Rd by gas exchange remains a challenge because leaves in the light are also photosynthesizing. The Kok method and the Laisk method are widely used to estimate Rd. We highlight theoretical limitations of these popular methods, and recent progress toward their improvement by using additional information from chlorophyll fluorescence and by accounting for the photosynthetic reassimilation of respired CO2. The latest evidence for daytime CO2 and energy release from the oxidative pentose phosphate pathway in chloroplasts appears to be important to understanding Rd. [ABSTRACT FROM AUTHOR]

Summary: During photosynthesis, electron transport reactions generate and shuttle reductant to allow CO2 reduction by the Calvin–Benson–Bassham cycle and the formation of biomass building block in the so‐called linear electron flow (LEF). However, in nature, environmental parameters like light intensity or CO2 availability can vary and quickly change photosynthesis rates, creating an imbalance between photosynthetic energy production and metabolic needs. In addition to LEF, alternative photosynthetic electron flows are central to allow photosynthetic energy to match metabolic demand in response to environmental variations. Microalgae arguably harbour one of the most diverse set of alternative electron flows (AEFs), including cyclic (CEF), pseudocyclic (PCEF) and chloroplast‐to‐mitochondria (CMEF) electron flow. While CEF, PCEF and CMEF have large functional overlaps, they differ in the conditions they are active and in their role for photosynthetic energy balance. Here, I review the molecular mechanisms of CEF, PCEF and CMEF in microalgae. I further propose a quantitative framework to compare their key physiological roles and quantify how the photosynthetic energy is partitioned to maintain a balanced energetic status of the cell. Key differences in AEF within the green lineage and the potential of rewiring photosynthetic electrons to enhance plant robustness will be discussed. Adrien Burlacot is a finalist of the 2023 New Phytologist Tansley Medal competition for excellence in plant science. See Slater & Dolan (2023, 240: 2171–2172) for more details. [ABSTRACT FROM AUTHOR]

Summary: Induction of high photosynthetic capacity is a key acclimation response to high light (HL) for many herbaceous dicot plants; however, the signaling pathways that control this response remain largely unknown. Here, a systems biology approach was utilized to characterize the induction of high photosynthetic capacity in strongly and weakly acclimating Arabidopsis thaliana accessions.Plants were grown for 5 wk in a low light (LL) regime, and time‐resolved photosynthetic physiological, metabolomic, and transcriptomic responses were measured during subsequent exposure to HL.The induction of high nitrogen (N) assimilation rates early in the HL shift was strongly predictive of the induction of photosynthetic capacity later in the HL shift. Accelerated N assimilation rates depended on the mobilization of existing organic acid (OA) reserves and increased de novo OA synthesis during the induction of high photosynthetic capacity. Enhanced sucrose biosynthesis capacity increased in tandem with the induction of high photosynthetic capacity, and increased starch biosynthetic capacity was balanced by increased starch catabolism.This systems analysis supports a model in which the efficient induction of N assimilation early in the HL shift begins the cascade of events necessary for the induction of high photosynthetic capacity acclimation in HL. [ABSTRACT FROM AUTHOR]

Summary: The high productive potential, heat resilience, and greater water use efficiency of C4 over C3 plants attract considerable interest in the face of global warming and increasing population, but C4 plants are often sensitive to dehydration, questioning the feasibility of their wider adoption.To resolve the primary effect of dehydration from slower from secondary leaf responses originating within leaves to combat stress, we conducted an innovative dehydration experiment. Four crops grown in hydroponics were forced to a rapid yet controlled decrease in leaf water potential by progressively raising roots of out of the solution while measuring leaf gas exchange.We show that, under rapid dehydration, assimilation decreased more steeply in C4 maize and sorghum than in C3 wheat and sunflower. This reduction was due to a rise of nonstomatal limitation at triple the rate in maize and sorghum than in wheat and sunflower.Rapid reductions in assimilation were previously measured in numerous C4 species across both laboratory and natural conditions. Hence, we deduce that high sensitivity to rapid dehydration might stem from the disturbance of an intrinsic aspect of C4 bicellular photosynthesis. We posit that an obstruction to metabolite transport between mesophyll and bundle sheath cells could be the cause. [ABSTRACT FROM AUTHOR]

The Plastid Preview Meeting held in Norwich, UK in September 2022 focused on exploring the potential of plastid biology and biotechnology. Plastids are organelles with various functions, including photosynthesis and pigment production. The meeting showcased cutting-edge research in plastid biology, including topics like protein import and plastid division. It also highlighted the use of plastids in biotechnology to produce valuable proteins and metabolites. The meeting emphasized the importance of understanding fundamental plastid processes and developing strategies to increase productivity and resilience in cyanobacteria, algae, and plants. The text discusses various topics related to plastid biology and function, including targeting proteins to specific plastid subcompartments and improving plastid transformation technologies. It concludes by acknowledging the diversity in the field of plastid research and the ongoing evolution of technologies in this area. [Extracted from the article]

This article discusses a study on the targeting of flavodoxin to specific chloroplasts in maize cells to increase drought tolerance. The researchers generated transgenic maize lines with flavodoxin expression and targeting restricted to either mesophyll or bundle sheath chloroplasts. The results showed that maize plants with flavodoxin expression in mesophyll chloroplasts exhibited increased tolerance to oxidative stress and drought compared to wild-type and plants with flavodoxin expression in bundle sheath chloroplasts. This research suggests that targeting flavodoxin to specific chloroplasts could be a potential strategy for improving stress tolerance in maize. The study also provides insights into the relationship between environmental hardships and C4 photosynthesis in maize. [Extracted from the article]

Summary: Land carbon dynamics in temperate and boreal ecosystems are sensitive to environmental change. Accurately simulating gross primary productivity (GPP) and its seasonality is key for reliable carbon cycle projections. However, significant biases have been found in early spring GPP simulations of northern forests, where observations often suggest a later resumption of photosynthetic activity than predicted by models.Here, we used eddy covariance‐based GPP estimates from 39 forest sites that differ by their climate and dominant plant functional types. We used a mechanistic and an empirical light use efficiency (LUE) model to investigate the magnitude and environmental controls of delayed springtime photosynthesis resumption (DSPR) across sites.We found DSPR reduced ecosystem LUE by 30–70% at many, but not all site‐years during spring. A significant depression of LUE was found not only in coniferous but also at deciduous forests and was related to combined high radiation and low minimum temperatures.By embedding cold‐acclimation effects on LUE that considers the delayed effects of minimum temperatures, initial model bias in simulated springtime GPP was effectively resolved. This provides an approach to improve GPP estimates by considering physiological acclimation and enables more reliable simulations of photosynthesis in northern forests and projections in a warming climate. [ABSTRACT FROM AUTHOR]

Summary: Drought is a major abiotic stress that impairs plant growth and development. Despite this, a comprehensive understanding of drought effects on the photosynthetic apparatus is lacking. In this work, we studied the consequences of 14‐d drought treatment on Arabidopsis thaliana.We used biochemical and spectroscopic methods to examine photosynthetic membrane composition and functionality.Drought led to the disassembly of PSII supercomplexes and the degradation of PSII core. The light‐harvesting complexes (LHCII) instead remain in the membrane but cannot act as an antenna for active PSII, thus representing a potential source of photodamage. This effect can also be observed during nonphotochemical quenching (NPQ) induction when even short pulses of saturating light can lead to photoinhibition. At a later stage, under severe drought stress, the PSI antenna size is also reduced and the PSI‐LHCI supercomplexes disassemble. Surprisingly, although we did not observe changes in the PSI core protein content, the functionality of PSI is severely affected, suggesting the accumulation of nonfunctional PSI complexes.We conclude that drought affects both photosystems, although at a different stage, and that the operative quantum efficiency of PSII (ΦPSII) is very sensitive to drought and can thus be used as a parameter for early detection of drought stress. [ABSTRACT FROM AUTHOR]

Summary: Phosphorus (P) fertilization can alleviate a soil P deficiency in grassland ecosystems. Understanding plant functional traits that enhance P uptake can improve grassland management.We measured impacts of P addition on soil chemical and microbial properties, net photosynthetic rate (Pn) and nonstructural carbohydrate concentrations ([NSC]), and root P‐uptake rate (PUR), morphology, anatomy, and exudation of two dominant grass species: Leymus chinensis (C3) and Cleistogenes squarrosa (C4).For L. chinensis, PUR and Pn showed a nonlinear correlation. Growing more adventitious roots compensated for the decrease in P transport per unit root length, so that it maintained a high PUR. For C. squarrosa, PUR and Pn presented a linear correlation. Increased Pn was associated with modifications in root morphology, which further enhanced its PUR and a greater surplus of photosynthate and significantly stimulated root exudation (proxied by leaf [Mn]), which had a greater impact on rhizosheath micro‐environment and microbial PLFAs.Our results present correlations between the PUR and the Pn of L. chinensis and C. squarrosa and reveal that NSC appeared to drive the modifications of root morphology and exudation; they provide more objective basis for more efficient P‐input in grasslands to address the urgent problem of P deficiency. [ABSTRACT FROM AUTHOR]

Summary: To investigate the role of intracellular Ca2+ signaling in the perception and response mechanisms to light in unicellular microalgae, the genetically encoded ratiometric Ca2+ indicator Yellow Cameleon (YC3.6) was expressed in the model organism for green algae Chlamydomonas reinhardtii, targeted to cytosol, chloroplast, and mitochondria.Through in vivo single‐cell confocal microscopy imaging, light‐induced Ca2+ signaling was investigated in different conditions and different genotypes, including the photoreceptors mutants phot and acry. A genetically encoded H2O2 sensor was also adopted to investigate the possible role of H2O2 formation in light‐dependent Ca2+ signaling.Light‐dependent Ca2+ response was observed in Chlamydomonas reinhardtii cells only in the chloroplast as an organelle‐autonomous response, influenced by light intensity and photosynthetic electron transport. The absence of blue and red‐light photoreceptor aCRY strongly reduced the light‐dependent chloroplast Ca2+ response, while the absence of the blue photoreceptor PHOT had no significant effects. A correlation between high light‐induced chloroplast H2O2 gradients and Ca2+ transients was drawn, supported by H2O2‐induced chloroplast Ca2+ transients in the dark.In conclusion, different triggers are involved in the light‐induced chloroplast Ca2+ signaling as saturation of the photosynthetic electron transport, H2O2 formation, and aCRY‐dependent light perception. [ABSTRACT FROM AUTHOR]

Summary: Marine planktonic diatoms are among the most important contributors to phytoplankton blooms and marine net primary production. Their ecological success has been attributed to their ability to rapidly respond to changing environmental conditions.Here, we report common molecular mechanisms used by the model marine diatom Thalassiosira pseudonana to respond to 10 diverse environmental stressors using RNA‐Seq analysis.We identify a specific subset of 1076 genes that are differentially expressed in response to stressors that induce an imbalance between energy or resource supply and metabolic capacity, which we termed the diatom environmental stress response (d‐ESR). The d‐ESR is primarily composed of genes that maintain proteome homeostasis and primary metabolism. Photosynthesis is strongly regulated in response to environmental stressors but chloroplast‐encoded genes were predominantly upregulated while the nuclear‐encoded genes were mostly downregulated in response to low light and high temperature.In aggregate, these results provide insight into the molecular mechanisms used by diatoms to respond to a range of environmental perturbations and the unique role of the chloroplast in managing environmental stress in diatoms. This study facilitates our understanding of the molecular mechanisms underpinning the ecological success of diatoms in the ocean. [ABSTRACT FROM AUTHOR]

Summary: Global warming and droughts push forests closer to their thermal limits, altering tree carbon uptake and growth. To prevent critical overheating, trees can adjust their thermotolerance (Tcrit), temperature and photosynthetic optima (Topt and Aopt), and canopy temperature (Tcan) to stay below damaging thresholds. However, we lack an understanding of how soil droughts affect photosynthetic thermal plasticity and Tcan regulation.In this study, we measured the effect of soil moisture on the seasonal and diurnal dynamics of net photosynthesis (A), stomatal conductance (gs), and Tcan, as well as the thermal plasticity of photosynthesis (Tcrit, Topt, and Aopt), over the course of 1 yr using a long‐term irrigation experiment in a drought‐prone Pinus sylvestris forest in Switzerland.Irrigation resulted in higher needle‐level A, gs, Topt, and Aopt compared with naturally drought‐exposed trees. No daily or seasonal differences in Tcan were observed between treatments. Trees operated below their thermal thresholds (Tcrit), independently of soil moisture content.Despite strong Tcan and Tair coupling, we provide evidence that drought reduces trees' temperature optimum due to a substantial reduction of gs during warm and dry periods of the year. These findings provide important insights regarding the effects of soil drought on the thermal tolerance of P. sylvestris. [ABSTRACT FROM AUTHOR]

Summary: Terrestrial CAM plants typically occur in hot semiarid regions, yet can show high crop productivity under favorable conditions.To achieve a more mechanistic understanding of CAM plant productivity, a biochemical model of diel metabolism was developed and integrated with 3‐D shoot morphology to predict the energetics of light interception and photosynthetic carbon assimilation.Using Agave tequilana as an example, this biochemical model faithfully simulated the four diel phases of CO2 and metabolite dynamics during the CAM rhythm. After capturing the 3‐D form over an 8‐yr production cycle, a ray‐tracing method allowed the prediction of the light microclimate across all photosynthetic surfaces. Integration with the biochemical model thereby enabled the simulation of plant and stand carbon uptake over daily and annual courses.The theoretical maximum energy conversion efficiency of Agave spp. is calculated at 0.045–0.049, up to 7% higher than for C3 photosynthesis. Actual light interception, and biochemical and anatomical limitations, reduced this to 0.0069, or 15.6 Mg ha−1 yr−1 dry mass annualized over an 8‐yr cropping cycle, consistent with observation. This is comparable to the productivity of many C3 crops, demonstrating the potential of CAM plants in climates where little else may be grown while indicating strategies that could raise their productivity. [ABSTRACT FROM AUTHOR]

Summary: In natural ecosystems, plants compete for space, nutrients and light. The optically dense canopies limit the penetration of photosynthetically active radiation and light often becomes a growth‐limiting factor for the understory. The reduced availability of photons in the lower leaf layers is also a major constraint for yield potential in canopies of crop monocultures. Traditionally, crop breeding has selected traits related to plant architecture and nutrient assimilation rather than light use efficiency. Leaf optical density is primarily determined by tissue morphology and by the foliar concentration of photosynthetic pigments (chlorophylls and carotenoids). Most pigment molecules are bound to light‐harvesting antenna proteins in the chloroplast thylakoid membranes, where they serve photon capture and excitation energy transfer toward reaction centers of photosystems. Engineering the abundance and composition of antenna proteins has been suggested as a strategy to improve light distribution within canopies and reduce the gap between theoretical and field productivity. Since the assembly of the photosynthetic antennas relies on several coordinated biological processes, many genetic targets are available for modulating cellular chlorophyll levels. In this review, we outline the rationale behind the advantages of developing pale green phenotypes and describe possible approaches toward engineering light‐harvesting systems. [ABSTRACT FROM AUTHOR]

Summary: In many terrestrial seeds, photosynthetic activity supplies O2 to the developing plant embryo to sustain aerobic metabolism and enhance biosynthetic activity. However, whether seagrass seeds possess similar photosynthetic capacity to alleviate intra‐seed hypoxic stress conditions is unknown.We used a novel combination of microscale variable chlorophyll fluorescence imaging, a custom‐made O2 optode microrespirometry system and planar optode O2 imaging, to determine the O2 microenvironment and photosynthetic activity in developing seeds and seedlings of seagrass (Zostera marina).Developing, sheath‐covered seeds exhibited high O2 concentrations in the photosynthetic active seed sheath and low O2 concentrations in the centre of the seed at the position of the embryo. In light, photosynthesis in the seed sheath increased O2 availability in central parts of the seed enabling enhanced respiratory energy generation for biosynthetic activity. Early‐stage seedlings also displayed photosynthetic capacity in hypocotyl and cotyledonary tissues, which may be beneficial for seedling establishment.Sheath O2 production is important for alleviating intra‐seed hypoxic stress, which might increase endosperm storage activity, improving the conditions for successful seed maturation and germination. [ABSTRACT FROM AUTHOR]

Summary: An increasing number of small proteins has been identified in the genomes of well‐annotated organisms, including the model cyanobacterium Synechocystis sp. PCC 6803. We describe a newly assigned protein comprising 37 amino acids that is encoded upstream of the superoxide dismutase SodB encoding gene.To clarify the role of SliP4, we analyzed a Synechocystis sliP4 mutant and a strain containing a fully active, Flag‐tagged variant of SliP4 (SliP4.f).The initial hypothesis that this small protein might be functionally related to SodB could not be supported. Instead, we provide evidence that it fulfills important functions related to the organization of photosynthetic complexes. Therefore, we named it a small light‐induced protein of 4 kDa, SliP4. This protein is strongly induced under high‐light conditions. The lack of SliP4 causes a light‐sensitive phenotype due to impaired cyclic electron flow and state transitions. Interestingly, SliP4.f was co‐isolated with NDH1 complex and both photosystems. The interaction between SliP4.f and all three types of complexes was further confirmed by additional pulldowns and 2D‐electrophoreses.We propose that the dimeric SliP4 serves as a molecular glue promoting the aggregation of thylakoid complexes, which contributes to different electron transfer modes and energy dissipation under stress conditions. [ABSTRACT FROM AUTHOR]

Summary: Photoprotection against excess light via nonphotochemical quenching (NPQ) is indispensable for plant survival. However, slow NPQ relaxation under low light conditions can decrease yield of field‐grown crops up to 40%.Using semi‐high‐throughput assay, we quantified the kinetics of NPQ and photosystem II operating efficiency (ΦPSII) in a replicated field trial of more than 700 maize (Zea mays) genotypes across 2 yr. Parametrized kinetics data were used to conduct genome‐wide association studies.For six candidate genes involved in NPQ and ΦPSII kinetics in maize the loss of function alleles of orthologous genes in Arabidopsis (Arabidopsis thaliana) were characterized: two thioredoxin genes, and genes encoding a transporter in the chloroplast envelope, an initiator of chloroplast movement, a putative regulator of cell elongation and stomatal patterning, and a protein involved in plant energy homeostasis.Since maize and Arabidopsis are distantly related, we propose that genes involved in photoprotection and PSII function are conserved across vascular plants. The genes and naturally occurring functional alleles identified here considerably expand the toolbox to achieving a sustainable increase in crop productivity. [ABSTRACT FROM AUTHOR]

Summary: Growth rates and other biomass traits of phytoplankton are strongly affected by temperature. We hypothesized that resulting phenotypes originate from deviating temperature sensitivities of underlying physiological processes.We used membrane‐inlet mass spectrometry to assess photosynthetic and respiratory O2 and CO2 fluxes in response to abrupt temperature changes as well as after acclimation periods in the diatom Phaeodactylum tricornutum.Abrupt temperature changes caused immediate over‐ or undershoots in most physiological processes, that is, photosynthetic oxygen release (PSO2), photosynthetic carbon uptake (PSCO2), and respiratory oxygen release (RO2). Over acclimation timescales, cells were, however, able to re‐adjust their physiology and revert to phenotypic 'sweet spots'.Respiratory CO2 release (RCO2) was generally inhibited under high temperature and stimulated under low‐temperature settings, on abrupt as well as acclimation timescales. Such behavior may help mitochondria to stabilize plastidial ATP : NADPH ratios and thus maximize photosynthetic carbon assimilation. [ABSTRACT FROM AUTHOR]

Summary: Recent methodological advancements in determining the nonexchangeable hydrogen isotopic composition (δ2Hne) of plant carbohydrates make it possible to disentangle the drivers of hydrogen isotope (2H) fractionation processes in plants.Here, we investigated the influence of phylogeny on the δ2Hne of twig xylem cellulose and xylem water, as well as leaf sugars and leaf water, across 73 Northern Hemisphere tree and shrub species growing in a common garden.2H fractionation in plant carbohydrates followed distinct phylogenetic patterns, with phylogeny reflected more in the δ2Hne of leaf sugars than in that of twig xylem cellulose. Phylogeny had no detectable influence on the δ2Hne of twig or leaf water, showing that biochemistry, not isotopic differences in plant water, caused the observed phylogenetic pattern in carbohydrates. Angiosperms were more 2H‐enriched than gymnosperms, but substantial δ2Hne variations also occurred at the order, family, and species levels within both clades. Differences in the strength of the phylogenetic signals in δ2Hne of leaf sugars and twig xylem cellulose suggest that the original phylogenetic signal of autotrophic processes was altered by subsequent species‐specific metabolism.Our results will help improve 2H fractionation models for plant carbohydrates and have important consequences for dendrochronological and ecophysiological studies. [ABSTRACT FROM AUTHOR]

Summary: Polyploidy plays an important role in plant evolution, but knowledge of its eco‐physiological consequences, such as of the putatively enlarged stomata of polyploid plants, remains limited. Enlarged stomata should disadvantage polyploids at low CO2 concentrations (namely during the Quaternary glacial periods) because larger stomata are viewed as less effective at CO2 uptake.We observed the growth, physiology, and epidermal cell features of 15 diploids and their polyploid relatives cultivated under glacial, present‐day, and potential future atmospheric CO2 concentrations (200, 400, and 800 ppm respectively).We demonstrated some well‐known polyploidy effects, such as faster growth and larger leaves, seeds, stomata, and other epidermal cells. The stomata of polyploids, however, tended to be more elongated than those of diploids, and contrary to common belief, they had no negative effect on the CO2 uptake capacity of polyploids. Moreover, polyploids grew comparatively better than diploids even at low, glacial CO2 concentrations. Higher polyploids with large genomes also showed increased operational stomatal conductance and consequently, a lower water‐use efficiency.Our results point to a possible decrease in growth superiority of polyploids over diploids in a current and future high CO2 climatic scenarios, as well as the possible water and/or nutrient dependency of higher polyploids. [ABSTRACT FROM AUTHOR]

Summary: Coffee is one of the most traded commodities world‐wide. As with 70% of land plants, coffee is associated with arbuscular mycorrhizal (AM) fungi, but the molecular bases of this interaction are unknown.We studied the mycorrhizal phenotype of two commercially important Coffea arabica cultivars ('Typica National' and 'Catimor Amarillo'), upon Funnelliformis mosseae colonisation grown under phosphorus limitation, using an integrated functional approach based on multi‐omics, physiology and biochemistry.The two cultivars revealed a strong biomass increase upon mycorrhization, even at low level of fungal colonisation, improving photosynthetic efficiency and plant nutrition. The more important iconic markers of AM symbiosis were activated: We detected two gene copies of AM‐inducible phosphate (Pt4), ammonium (AM2) and nitrate (NPF4.5) transporters, which were identified as belonging to the C. arabica parental species (C. canephora and C. eugenioides) with both copies being upregulated. Transcriptomics data were confirmed by ions and metabolomics analyses, which highlighted an increased amount of glucose, fructose and flavonoid glycosides.In conclusion, both coffee cultivars revealed a high responsiveness to the AM fungus along their root‐shoot axis, showing a clear‐cut re‐organisation of the major metabolic pathways, which involve nutrient acquisition, carbon fixation, and primary and secondary metabolism. [ABSTRACT FROM AUTHOR]

Summary: Terrestrial biosphere models (TBMs) include the representation of vertical gradients in leaf traits associated with modeling photosynthesis, respiration, and stomatal conductance. However, model assumptions associated with these gradients have not been tested in complex tropical forest canopies.We compared TBM representation of the vertical gradients of key leaf traits with measurements made in a tropical forest in Panama and then quantified the impact of the observed gradients on simulated canopy‐scale CO2 and water fluxes.Comparison between observed and TBM trait gradients showed divergence that impacted canopy‐scale simulations of water vapor and CO2 exchange. Notably, the ratio between the dark respiration rate and the maximum carboxylation rate was lower near the ground than at the top‐of‐canopy, leaf‐level water‐use efficiency was markedly higher at the top‐of‐canopy, and the decrease in maximum carboxylation rate from the top‐of‐canopy to the ground was less than TBM assumptions.The representation of the gradients of leaf traits in TBMs is typically derived from measurements made within‐individual plants, or, for some traits, assumed constant due to a lack of experimental data. Our work shows that these assumptions are not representative of the trait gradients observed in species‐rich, complex tropical forests. [ABSTRACT FROM AUTHOR]

Summary: Climate warming is causing compositional changes in Andean tropical montane forests (TMFs). These shifts are hypothesised to result from differential responses to warming of cold‐ and warm‐affiliated species, with the former experiencing mortality and the latter migrating upslope. The thermal acclimation potential of Andean TMFs remains unknown.Along a 2000 m Andean altitudinal gradient, we planted individuals of cold‐ and warm‐affiliated species (under common soil and irrigation), exposing them to the hot and cold extremes of their thermal niches, respectively. We measured the response of net photosynthesis (Anet), photosynthetic capacity and leaf dark respiration (Rdark) to warming/cooling, 5 months after planting.In all species, Anet and photosynthetic capacity at 25°C were highest when growing at growth temperatures (Tg) closest to their thermal means, declining with warming and cooling in cold‐affiliated and warm‐affiliated species, respectively. When expressed at Tg, photosynthetic capacity and Rdark remained unchanged in cold‐affiliated species, but the latter decreased in warm‐affiliated counterparts. Rdark at 25°C increased with temperature in all species, but remained unchanged when expressed at Tg.Both species groups acclimated to temperature, but only warm‐affiliated species decreased Rdark to photosynthetic capacity ratio at Tg as temperature increased. This could confer them a competitive advantage under future warming. [ABSTRACT FROM AUTHOR]

Summary: Plant water use theory has largely been developed within a plant‐performance paradigm that conceptualizes water use in terms of value for carbon gain and that sits within a neoclassical economic framework. This theory works very well in many contexts but does not consider other values of water to plants that could impact their fitness. Here, we survey a range of alternative hypotheses for drivers of water use and stomatal regulation. These hypotheses are organized around relevance to extreme environments, population ecology, and community ecology. Most of these hypotheses are not yet empirically tested and some are controversial (e.g. requiring more agency and behavior than is commonly believed possible for plants). Some hypotheses, especially those focused around using water to avoid thermal stress, using water to promote reproduction instead of growth, and using water to hoard it, may be useful to incorporate into theory or to implement in Earth System Models. [ABSTRACT FROM AUTHOR]

Summary: Browning and nutrient inputs from extreme rainfall, together with increased vertical mixing due to strong winds, are more frequent in coastal ecosystems; however, their interactive effects on phytoplankton are poorly understood. We conducted experiments to quantify how browning, together with different mixing speeds (fluctuating radiation), and a nutrient pulse alter primary productivity and photosynthetic efficiency in estuarine phytoplankton communities.Phytoplankton communities (grazers excluded) were exposed simultaneously to these drivers, and key photosynthetic targets were quantified: oxygen production, electron transport rates (ETRs), and carbon fixation immediately following collection and after a 2‐d acclimation/adaptation period.Increasing mixing speeds in a turbid water column (e.g. browning) significantly decreased ETRs and carbon fixation in the short term. Acclimation/adaptation to this condition for 2 d resulted in an increase in nanoplanktonic diatoms and a community that was photosynthetically more efficient; however, this did not revert the decreasing trend in carbon fixation with increased mixing speed.The observed interactive effects (resulting from extreme rainfall and strong winds) may have profound implications in the trophodynamics of highly productive system such as the Southwest Atlantic Ocean due to changes in the size structure of the community and reduced productivity. [ABSTRACT FROM AUTHOR]

Nonetheless, the content of photosynthetic pigments (chlorophylls and carotenoids) in I T. japonicum i roots was approximately half of that in the leaves, whereas the pigment content in I T. aphyllum i roots was similar to that in I T. japonicum i leaves (Fig. Keywords: 14CO2 labeling; carbon acquisition; chlorophyll fluorescence; crassulacean acid metabolism (CAM); Orchidaceae; radioisotope EN 14CO2 labeling carbon acquisition chlorophyll fluorescence crassulacean acid metabolism (CAM) Orchidaceae radioisotope 932 937 6 04/03/23 20230501 NES 230501 Orchidaceae is one of the most diverse families of flowering plants, with > 28 000 known species distributed among 763 genera (Christenhusz & Byng, [8]). Moreover, the high nocturnal C fixation by I T. aphyllum i roots comparable to that by I T. japonicum i leaves indicates sophisticated C fixation in I T. aphyllum i roots. [Extracted from the article]