Search

How lake temperatures across large geographic regions are responding to widespread alterations in ice phenology (i.e., the timing of seasonal ice formation and loss) remains unclear. Here, we analyse satellite data and global-scale simulations to investigate the contribution of long-term variations in the seasonality of lake ice to surface water temperature trends across the Northern Hemisphere. Our analysis suggests a widespread excess lake surface warming during the months of ice-off which is, on average, 1.4 times that calculated during the open-water season. This excess warming is influenced predominantly by an 8-day advancement in the average timing of ice break-up from 1979 to 2020. Until the permanent loss of lake ice in the future, excess lake warming may be further amplified due to projected future alterations in lake ice phenology. Excess lake warming will likely alter within-lake physical and biogeochemical processes with numerous implications for lake ecosystems. How lake temperatures are responding to widespread changes in lake ice remains unclear. Here the authors show the excess lake warming during the ice-off and ice-on month due to earlier ice loss and later ice formation across the Northern Hemisphere. [ABSTRACT FROM AUTHOR]

Marine heat waves (MHW) and cool spells (MCS) can both positively and negatively impact marine ecosystems with potentially large societal and economic impacts. Here, I examine the global teleconnections of MHW/MCS in the southern hemisphere and Tasman Sea. When MHW/MCS are defined with respect to a linear warming trend, there is little evidence that MHW in the Tasman Sea are changing in either frequency or intensity but may be lasting longer. MCS may be becoming weaker and less frequent. I show that MHW/MCS in the Tasman Sea co-occur with corresponding events in the Atlantic, Indian, and eastern-Pacific Oceans, and these southern hemisphere events are likely driven by stalling of a global wavenumber-4 (W4) atmospheric wave, leading to anomalously weak north-easterly winds during MHW or strong south-westerly winds during MCS. Thus, the key to predicting MHW/MCS is in understanding what causes the atmospheric W4 wave to stall. Marine heat waves and cold spells threaten ocean ecosystems and are thought to be increasing with climate change. Here the author shows that MHW/MCS in the Tasman Sea co-occur with corresponding events in the Atlantic, Indian, and Pacific Oceans, and these southern hemisphere events are driven by stalling of a global wavenumber-4 atmospheric wave. [ABSTRACT FROM AUTHOR]

The glucagon-like peptide-1 (GLP-1) receptor is a validated drug target for metabolic disorders. Ago-allosteric modulators are capable of acting both as agonists on their own and as efficacy enhancers of orthosteric ligands. However, the molecular details of ago-allosterism remain elusive. Here, we report three cryo-electron microscopy structures of GLP-1R bound to (i) compound 2 (an ago-allosteric modulator); (ii) compound 2 and GLP-1; and (iii) compound 2 and LY3502970 (a small molecule agonist), all in complex with heterotrimeric Gs. The structures reveal that compound 2 is covalently bonded to C347 at the cytoplasmic end of TM6 and triggers its outward movement in cooperation with the ECD whose N terminus penetrates into the GLP-1 binding site. This allows compound 2 to execute positive allosteric modulation through enhancement of both agonist binding and G protein coupling. Our findings offer insights into the structural basis of ago-allosterism at GLP-1R and may aid the design of better therapeutics. The glucagon-like peptide-1 (GLP-1) receptor is a key regulator of glucose homeostasis and a drug target for type 2 diabetes but available GLP-1R agonists are suboptimal due to several side-effects. Here authors report the cryo-EM structure of GLP-1R bound to an ago-allosteric modulator in complex with heterotrimeric Gs which offers insights into the molecular details of ago-allosterism. [ABSTRACT FROM AUTHOR]

Most of Earth's fresh surface water is consolidated in just a few of its largest lakes, and because of their unique response to environmental conditions, lakes have been identified as climate change sentinels. While the response of lake surface water temperatures to climate change is well documented from satellite and summer in situ measurements, our understanding of how water temperatures in large lakes are responding at depth is limited, as few large lakes have detailed long-term subsurface observations. We present an analysis of three decades of high frequency (3-hourly and hourly) subsurface water temperature data from Lake Michigan. This unique data set reveals that deep water temperatures are rising in the winter and provides precise measurements of the timing of fall overturn, the point of minimum temperature, and the duration of the winter cooling period. Relationships from the data show a shortened winter season results in higher subsurface temperatures and earlier onset of summer stratification. Shifts in the thermal regimes of large lakes will have profound impacts on the ecosystems of the world's surface freshwater. This study presents hourly data from a thermistor string in Lake Michigan, inspecting its response at depth to surface warming. Based on the data, the study suggests bottom lake temperatures respond to changes in turnover and re-stratification, with the ultimate possibility of the lake shifting from dimictic to monomictic. [ABSTRACT FROM AUTHOR]

Water temperature is critical for the ecology of lakes. However, the ability to predict its spatial and seasonal variation is constrained by the lack of a thermal classification system. Here we define lake thermal regions using objective analysis of seasonal surface temperature dynamics from satellite observations. Nine lake thermal regions are identified that mapped robustly and largely contiguously globally, even for small lakes. The regions differed from other global patterns, and so provide unique information. Using a lake model forced by 21st century climate projections, we found that 12%, 27% and 66% of lakes will change to a lower latitude thermal region by 2080–2099 for low, medium and high greenhouse gas concentration trajectories (Representative Concentration Pathways 2.6, 6.0 and 8.5) respectively. Under the worst-case scenario, a 79% reduction in the number of lakes in the northernmost thermal region is projected. This thermal region framework can facilitate the global scaling of lake-research. Water temperature is a critical variable for lakes, but its spatial and temporal patterns are not well characterised globally. Here, the authors use surface temperature dynamics to define lake thermal regions that group lakes with similar patterns, and show how these regions shift under climate change. [ABSTRACT FROM AUTHOR]

In addition to their use in DNA sequencing, ultrathin nanopore membranes have potential applications in detecting topological variations in deoxyribonucleic acid (DNA). This is due to the fact that when topologically edited DNA molecules, driven by electrophoretic forces, translocate through a narrow orifice, transient residings of edited segments inside the orifice modulate the ionic flow. Here we utilize two programmable barcoding methods based on base-pairing, namely forming a gap in dsDNA and creating protrusion sites in ssDNA for generating a hybrid DNA complex. We integrate a discriminative noise analysis for ds and ss DNA topologies into the threshold detection, resulting in improved multi-level signal detection and consequent extraction of reliable information about topological variations. Moreover, the positional information of the barcode along the template sequence can be determined unambiguously. All methods may be further modified to detect nicks in DNA, and thereby detect DNA damage and repair sites. [ABSTRACT FROM AUTHOR]

Hyaluronan (or hyaluronic acid, HA) is a ubiquitous molecule that plays critical roles in numerous physiological functions in vivo, including tissue hydration, inflammation, and joint lubrication. Both the abundance and size distribution of HA in biological fluids are recognized as robust indicators of various pathologies and disease progressions. However, such analyses remain challenging because conventional methods are not sufficiently sensitive, have limited dynamic range, and/or are only semi-quantitative. Here we demonstrate label-free detection and molecular weight discrimination of HA with a solid-state nanopore sensor. We first employ synthetic HA polymers to validate the measurement approach and then use the platform to determine the size distribution of as little as 10 ng of HA extracted directly from synovial fluid in an equine model of osteoarthritis. Our results establish a quantitative method for assessment of a significant molecular biomarker that bridges a gap in the current state of the art. [ABSTRACT FROM AUTHOR]

The many unique properties of graphene, such as the tunable optical, electrical, and plasmonic response make it ideally suited for applications such as biosensing. As with other surface-based biosensors, however, the performance is limited by the diffusive transport of target molecules to the surface. Here we show that atomically sharp edges of monolayer graphene can generate singular electrical field gradients for trapping biomolecules via dielectrophoresis. Graphene-edge dielectrophoresis pushes the physical limit of gradient-forcebased trapping by creating atomically sharp tweezers. We have fabricated locally backgated devices with an 8-nm-thick HfO2 dielectric layer and chemical-vapor-deposited graphene to generate 10× higher gradient forces as compared to metal electrodes. We further demonstrate near-100% position-controlled particle trapping at voltages as low as 0.45 V with nanodiamonds, nanobeads, and DNA from bulk solution within seconds. This trapping scheme can be seamlessly integrated with sensors utilizing graphene as well as other twodimensional materials. [ABSTRACT FROM AUTHOR]

The capability to screen a range of proteins at the single-molecule level with enhanced selectivity in biological fluids has been in part a driving force in developing future diagnostic and therapeutic strategies. The combination of nanopore sensing and nucleic acid aptamer recognition comes close to this ideal due to the ease of multiplexing, without the need for expensive labelling methods or extensive sample pre-treatment. Here, we demonstrate a fully flexible, scalable and low-cost detection platform to sense multiple protein targets simultaneously by grafting specific sequences along the backbone of a double-stranded DNA carrier. Protein bound to the aptamer produces unique ionic current signatures which facilitates accurate target recognition. This powerful approach allows us to differentiate individual protein sizes via characteristic changes in the sub-peak current. Furthermore, we show that by using DNA carriers it is possible to perform single-molecule screening in human serum at ultra-low protein concentrations. [ABSTRACT FROM AUTHOR]

The ability to precisely control the transport of single DNA molecules through a nanoscale channel is critical to DNA sequencing and mapping technologies that are currently under development. Here we show how the electrokinetically driven introduction of DNA molecules into a nanochannel is facilitated by incorporating a three-dimensional nanofunnel at the nanochannel entrance. Individual DNA molecules are imaged as they attempt to overcome the entropic barrier to nanochannel entry through nanofunnels with various shapes. Theoretical modeling of this behavior reveals the pushing and pulling forces that result in up to a 30-fold reduction in the threshold electric field needed to initiate nanochannel entry. In some cases, DNA molecules are stably trapped and axially positioned within a nanofunnel at sub-threshold electric field strengths, suggesting the utility of nanofunnels as force spectroscopy tools. These applications illustrate the benefit of finely tuning nanoscale conduit geometries, which can be designed using the theoretical model developed here. [ABSTRACT FROM AUTHOR]

Janus materials have distinct surfaces on their opposite faces. Graphene, a two-dimensional giant molecule, provides an excellent candidate to fabricate the thinnest Janus discs and study the asymmetric chemistry of atomic-thick nanomembranes using covalent chemical functionalisation. Here we present the first experimental realisation of nonsymmetrically modified single-layer graphene-Janus graphene-which is fabricated by a two-step surface covalent functionalisation assisted by a poly(methyl methacrylate)-mediated transfer approach. Four types of Janus graphene are produced by co-grafting of halogen and aryl/oxygen-functional groups on each side. Chemical decorations on one side are found to be capable of affecting both chemical reactivity and physical wettability of the opposite side, indicative of communication between the two grafted groups. This novel asymmetric structure provides a platform for theoretical and experimental studies of two-dimensional chemistry and graphene devices with multiple functions. [ABSTRACT FROM AUTHOR]