30 results on '"Susumu Tonegawa"'
Search Results
2. Memory retrieval by activating engram cells in mouse models of early Alzheimer’s disease
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Michele Pignatelli, Teryn I. Mitchell, Dheeraj S. Roy, Tomás J. Ryan, Susumu Tonegawa, and Autumn Arons
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Male ,0301 basic medicine ,Aging ,Memory, Long-Term ,Dendritic Spines ,Memory, Episodic ,Long-Term Potentiation ,Hippocampus ,Amnesia ,Mice, Transgenic ,Plaque, Amyloid ,tau Proteins ,Engram ,Biology ,Amyloid beta-Protein Precursor ,Mice ,03 medical and health sciences ,0302 clinical medicine ,Alzheimer Disease ,Early Medical Intervention ,Presenilin-1 ,medicine ,Animals ,Humans ,Transgenes ,Episodic memory ,Multidisciplinary ,Long-term memory ,Dentate gyrus ,Neuroanatomy of memory ,Optogenetics ,Disease Models, Animal ,030104 developmental biology ,Dentate Gyrus ,Synapses ,Memory consolidation ,medicine.symptom ,Neuroscience ,030217 neurology & neurosurgery - Abstract
Alzheimer's disease (AD) is a neurodegenerative disorder characterized by progressive memory decline and subsequent loss of broader cognitive functions. Memory decline in the early stages of AD is mostly limited to episodic memory, for which the hippocampus has a crucial role. However, it has been uncertain whether the observed amnesia in the early stages of AD is due to disrupted encoding and consolidation of episodic information, or an impairment in the retrieval of stored memory information. Here we show that in transgenic mouse models of early AD, direct optogenetic activation of hippocampal memory engram cells results in memory retrieval despite the fact that these mice are amnesic in long-term memory tests when natural recall cues are used, revealing a retrieval, rather than a storage impairment. Before amyloid plaque deposition, the amnesia in these mice is age-dependent, which correlates with a progressive reduction in spine density of hippocampal dentate gyrus engram cells. We show that optogenetic induction of long-term potentiation at perforant path synapses of dentate gyrus engram cells restores both spine density and long-term memory. We also demonstrate that an ablation of dentate gyrus engram cells containing restored spine density prevents the rescue of long-term memory. Thus, selective rescue of spine density in engram cells may lead to an effective strategy for treating memory loss in the early stages of AD.
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- 2016
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3. Activating positive memory engrams suppresses depression-like behaviour
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Xu Liu, Steve Ramirez, Anthony Moffa, Joanne Zhou, Roger L. Redondo, Susumu Tonegawa, and Christopher J. MacDonald
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Male ,Pleasure ,Time Factors ,Hippocampus ,Engram ,Hippocampal formation ,Amygdala ,Nucleus Accumbens ,Article ,Mice ,Memory ,Neural Pathways ,medicine ,Animals ,Chronic stress ,Multidisciplinary ,Behavior, Animal ,Depression ,business.industry ,Dentate gyrus ,Neurogenesis ,Anhedonia ,Mice, Inbred C57BL ,Optogenetics ,medicine.anatomical_structure ,Female ,medicine.symptom ,business ,Proto-Oncogene Proteins c-fos ,Neuroscience ,Stress, Psychological - Abstract
Stress is considered a potent environmental risk factor for many behavioural abnormalities, including anxiety and mood disorders. Animal models can exhibit limited but quantifiable behavioural impairments resulting from chronic stress, including deficits in motivation, abnormal responses to behavioural challenges, and anhedonia. The hippocampus is thought to negatively regulate the stress response and to mediate various cognitive and mnemonic aspects of stress-induced impairments, although the neuronal underpinnings sufficient to support behavioural improvements are largely unknown. Here we acutely rescue stress-induced depression-related behaviours in mice by optogenetically reactivating dentate gyrus cells that were previously active during a positive experience. A brain-wide histological investigation, coupled with pharmacological and projection-specific optogenetic blockade experiments, identified glutamatergic activity in the hippocampus-amygdala-nucleus-accumbens pathway as a candidate circuit supporting the acute rescue. Finally, chronically reactivating hippocampal cells associated with a positive memory resulted in the rescue of stress-induced behavioural impairments and neurogenesis at time points beyond the light stimulation. Together, our data suggest that activating positive memories artificially is sufficient to suppress depression-like behaviours and point to dentate gyrus engram cells as potential therapeutic nodes for intervening with maladaptive behavioural states.
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- 2015
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4. Bidirectional switch of the valence associated with a hippocampal contextual memory engram
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Xu Liu, Steve Ramirez, Susumu Tonegawa, Roger L. Redondo, Autumn L. Arons, Joshua Kim, Massachusetts Institute of Technology. Department of Biology, Massachusetts Institute of Technology. Department of Brain and Cognitive Sciences, Picower Institute for Learning and Memory, RIKEN-MIT Center for Neural Circuit Genetics, Redondo, Roger L., Kim, Joshua, Arons, Autumn, Ramirez Moreno, Steve, Liu, Xu, and Tonegawa, Susumu
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Male ,Population ,Conditioning, Classical ,Engram ,Optogenetics ,Hippocampal formation ,Amygdala ,Hippocampus ,Article ,Mice ,Reward ,Memory ,Neuroplasticity ,medicine ,Avoidance Learning ,Animals ,Valence (psychology) ,education ,education.field_of_study ,Multidisciplinary ,Neuronal Plasticity ,Dentate gyrus ,Fear ,3. Good health ,Mice, Inbred C57BL ,Affect ,medicine.anatomical_structure ,Dentate Gyrus ,Female ,Cues ,Psychology ,Neuroscience - Abstract
The valence of memories is malleable because of their intrinsic reconstructive property. This property of memory has been used clinically to treat maladaptive behaviours. However, the neuronal mechanisms and brain circuits that enable the switching of the valence of memories remain largely unknown. Here we investigated these mechanisms by applying the recently developed memory engram cell- manipulation technique. We labelled with channelrhodopsin-2 (ChR2) a population of cells in either the dorsal dentate gyrus (DG) of the hippocampus or the basolateral complex of the amygdala (BLA) that were specifically activated during contextual fear or reward conditioning. Both groups of fear-conditioned mice displayed aversive light-dependent responses in an optogenetic place avoidance test, whereas both DG- and BLA-labelled mice that underwent reward conditioning exhibited an appetitive response in an optogenetic place preference test. Next, in an attempt to reverse the valence of memory within a subject, mice whose DG or BLA engram had initially been labelled by contextual fear or reward conditioning were subjected to a second conditioning of the opposite valence while their original DG or BLA engram was reactivated by blue light. Subsequent optogenetic place avoidance and preference tests revealed that although the DG-engram group displayed a response indicating a switch of the memory valence, the BLA-engram group did not. This switch was also evident at the cellular level by a change in functional connectivity between DG engram-bearing cells and BLA engram-bearing cells. Thus, we found that in the DG, the neurons carrying the memory engram of a given neutral context have plasticity such that the valence of a conditioned response evoked by their reactivation can be reversed by re-associating this contextual memory engram with a new unconditioned stimulus of an opposite valence. Our present work provides new insight into the functional neural circuits underlying the malleability of emotional memory., RIKEN Brain Science Institute, Howard Hughes Medical Institute, JPB Foundation, National Institutes of Health (U.S.) (Pre-doctoral Training Grant T32GM007287)
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- 2013
5. Homing of a γδ thymocyte subset with homogeneous T-cell receptors to mucosal epithelia
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Marc Bonneville, Juan J. Lafaille, Andrew G. Farr, Yohtaroh Takagaki, Susumu Tonegawa, Shigeyoshi Itohara, and Werner Haas
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Ratón ,T-Lymphocytes ,Molecular Sequence Data ,Receptors, Antigen, T-Cell ,Biology ,Polymerase Chain Reaction ,law.invention ,Leukocyte Count ,Mice ,Tongue ,law ,medicine ,Animals ,Receptor ,Polymerase chain reaction ,Skin ,Mice, Inbred BALB C ,Mucous Membrane ,Multidisciplinary ,Base Sequence ,Gene Rearrangement, gamma-Chain T-Cell Antigen Receptor ,Uterus ,T-cell receptor ,Epithelial Cells ,Immunohistochemistry ,Epithelium ,Cell biology ,Intestines ,Thymocyte ,medicine.anatomical_structure ,Vagina ,Immunology ,Female ,Homing (hematopoietic) - Abstract
In mice gamma delta T-cell populations with distinct T-cell receptor (TCR) repertoires and homing properties have been identified. Diversified populations are found in lymphoid organs and intestinal epithelia. By contrast, the gamma delta T-cells that have been found in the murine skin are homogeneous. They express a TCR consisting of one particular V gamma 5 and one particular V delta 1 chain and seem to originate from early fetal thymocytes. We have now systematically analysed many tissues by immunohistochemistry and TCR gene sequencing aided by the polymerase chain reaction. These studies revealed a second homogeneous gamma delta T-cell subset in epithelia not of the intestine and skin, but of the vagina, uterus and tongue. The TCR expressed by this gamma delta T-cell subset consists of the same V delta 1 chain. Cells that express this particular TCR have previously been shown to be positively selected in the late fetal thymus.
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- 1990
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6. Cortex-restricted disruption of NMDAR1 impairs neuronal patterns in the barrel cortex
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Yusuke Taguchi, Akash Datwani, Shigeyoshi Itohara, Hiroshi Nishiyama, Takuji Iwasato, Alexander Wolf, Susumu Tonegawa, Reha S. Erzurumlu, and Thomas Knöpfel
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Male ,Central nervous system ,Sensory system ,Biology ,Somatosensory system ,Receptors, N-Methyl-D-Aspartate ,Article ,Mice ,Thalamus ,Neural Pathways ,medicine ,Animals ,Crosses, Genetic ,Body Patterning ,Homeodomain Proteins ,Mice, Knockout ,Neurons ,Multidisciplinary ,Glutamate receptor ,Cell Differentiation ,Anatomy ,Somatosensory Cortex ,Barrel cortex ,Mice, Inbred C57BL ,medicine.anatomical_structure ,Cerebral cortex ,Vibrissae ,Excitatory postsynaptic potential ,Female ,Brainstem ,Neuroscience ,Brain Stem ,Transcription Factors - Abstract
In the rodent primary somatosensory cortex, the configuration of whiskers and sinus hairs on the snout and of receptor-dense zones on the paws is topographically represented as discrete modules of layer IV granule cells (barrels) and thalamocortical afferent terminals1,2. The role of neural activity, particularly activity mediated by NMDARs (N-methyl-d-aspartate receptors), in patterning of the somatosensory cortex has been a subject of debate3–6. We have generated mice in which deletion of the NMDAR1 (NR1) gene is restricted to excitatory cortical neurons, and here we show that sensory periphery-related patterns develop normally in the brainstem and thalamic somatosensory relay stations of these mice. In the somatosensory cortex, thalamocortical afferents corresponding to large whiskers form patterns and display critical period plasticity, but their patterning is not as distinct as that seen in the cortex of normal mice. Other thalamocortical patterns corresponding to sinus hairs and digits are mostly absent. The cellular aggregates known as barrels and barrel boundaries do not develop even at sites where thalamocortical afferents cluster. Our findings indicate that cortical NMDARs are essential for the aggregation of layer IV cells into barrels and for development of the full complement of thalamocortical patterns.
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- 2000
7. Self-tolerance to transgenic γδ T cells by intrathymic inactivation
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Osami Kanagawa, Werner Haas, A Berns, Susumu Tonegawa, Shigeyoshi Itohara, I Ishida, Sjef Verbeek, and Marc Bonneville
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Genetically modified mouse ,Thymocyte ,Multidisciplinary ,biology ,Transgene ,Immunology ,T-cell receptor ,biology.protein ,T lymphocyte ,Major histocompatibility complex ,CD8 ,Cell biology ,Immune tolerance - Abstract
During their intrathymic differentiation, T lymphocytes expressing alpha beta T-cell receptors (TCR) are negatively and positively selected. This selection contributes to the establishment of self-tolerance and ensures that mature CD4+ and CD8+ cell populations are restricted by the self major histocompatibility complex. Little is known, however, about gamma delta T-cell development. To investigate whether selection operates in the establishment of the gamma delta T-cell class, we have generated transgenic mice using gamma- and delta-transgenes encoding a TCR that is specific for a product of a gene in the TL-region of the TLb haplotype. Similar numbers of thymocytes expressing the transgenic TCR were generated in mice of TLb and TLd haplotypes. But gamma delta thymocytes from TLb and TLd transgenic mice differed in cell size, TCR density and in their capacity to respond to TLb stimulator cells or interleukin-2 (IL-2). In contrast to gamma delta T cells from TLd transgenic mice, gamma delta T cells from TLb transgenic mice did not produce IL-2 and did not proliferate in response to TLb stimulator cells, but they did proliferate in the presence of exogenous IL-2. These results indicate that functional inactivation of self-antigen-specific T cells could contribute to the establishment of self-tolerance to thymic determinants.
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- 1990
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8. Bcl-2 promotes regeneration of severed axons in mammalian CNS
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Jean-Claude Martinou, Susumu Tonegawa, Dong Feng Chen, and Gerald E. Schneider
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Central Nervous System ,Male ,Retinal Ganglion Cells ,Heterozygote ,Superior Colliculi ,Cell Survival ,Central nervous system ,Gene Expression ,Cell Count ,Mice, Transgenic ,Biology ,Cysteine Proteinase Inhibitors ,Retinal ganglion ,Mice ,Organ Culture Techniques ,medicine ,Animals ,Axon ,Cellular Senescence ,Retina ,Multidisciplinary ,Regeneration (biology) ,Caspase 1 ,Anatomy ,Embryonic stem cell ,Axons ,Genes, bcl-2 ,Nerve Regeneration ,Mice, Inbred C57BL ,Cysteine Endopeptidases ,medicine.anatomical_structure ,nervous system ,Cell culture ,Female ,sense organs ,Tectum ,Neuroscience ,Oligopeptides ,Gene Deletion - Abstract
Most neurons of the mammalian central nervous system (CNS) lose the ability to regenerate severed axons in vivo after a certain point in development1. At least part of this loss in regenerative potential is intrinsic to neurons2–4. Although embryonic retinal ganglion cells (RGCs) can grow axons into tectum of any age, most RGCs from older animals fail to extend axons into CNS tissue derived from donors of any age, including the embryonic tectum2. Here we report that the proto-oncogene bcl-2 plays a key role in this developmental change by promoting the growth and regeneration of retinal axons. This effect does not seem to be an indirect consequence of its well-known anti-apoptotic activity. Another anti-apoptotic drug, ZVAD, supported neuronal survival but did not promote axon regeneration in culture. This finding could lead to new strategies for the treatment of injuries to the CNS.
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- 1997
9. Diversity of murine gamma genes and expression in fetal and adult T lymphocytes
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Joseph S. Heilig and Susumu Tonegawa
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RNA Splicing ,Receptors, Antigen, T-Cell, alpha-beta ,T-Lymphocytes ,T cell ,Receptors, Antigen, T-Cell ,Thymus Gland ,Biology ,Major histocompatibility complex ,Mice ,Antigen ,Gene expression ,medicine ,Animals ,Gene ,Regulation of gene expression ,Genetics ,Multidisciplinary ,Base Sequence ,Receptors, Antigen, T-Cell, gamma-delta ,DNA ,Gene rearrangement ,T lymphocyte ,Molecular biology ,Peptide Fragments ,medicine.anatomical_structure ,Genes ,biology.protein - Abstract
The search for the genes encoding the T-cell receptor alpha and chains revealed a third gene, T gamma (ref. 1), which shares with t T alpha (refs 2-7) and T beta (refs 8-15) genes a number of structure features, including somatic rearrangement during T-cell development. T gamma gene expression appears to be unnecessary in son mature T cells and is at its greatest in fetal thymocytes encouraging speculation that T gamma has a role in T-cell development and may be involved in the recognition of polymorphic major histocompatibility complex (MHC) products during thymic education. One argument against the participation of T gamma in such a process has been its apparently limited diversity, due to the small number of gene segments available for rearrangement. We here describe the identification of additional T gamma V-gene segments and demonstrate that they can be rearranged to previously identified J- and C-gene segments and are expressed in fetal thymocytes. In addition we describe a variety of patterns of T gamma mRNA processing which may be significant for T gamma gene regulation.
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- 1986
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10. A third rearranged and expressed gene in a clone of cytotoxic T lymphocytes
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Herman N. Eisen, Yohtaroh Takagaki, Susumu Tonegawa, Adrian Hayday, Haruo Saito, and David M. Kranz
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Transcription, Genetic ,Macromolecular Substances ,Receptors, Antigen, T-Cell ,Immunoglobulins ,Biology ,Homology (biology) ,Cell Line ,Mice ,Complementary DNA ,Gene expression ,Animals ,Humans ,Cytotoxic T cell ,Amino Acid Sequence ,RNA, Messenger ,Cloning, Molecular ,Gene ,Genetics ,Constant region ,Multidisciplinary ,Base Sequence ,DNA ,Gene rearrangement ,T lymphocyte ,Molecular biology ,Clone Cells ,Genes ,RNA ,Poly A ,T-Lymphocytes, Cytotoxic - Abstract
En plus des deux genes prealablement identifies et exprimes dans un clone de lymphocytes T cytotoxiques, on identifie un troisieme gene egalement rearrange et exprime dans le meme clone. Ce nouveau gene presente une diversite clonale, code pour une chaine polypeptidique qui contient des domaines variable et constant de type immunoglobuline, porte des sites de N-glycosylation potentiels et constitue un candidat particulierement vraisemblable pour le gene codant pour la sousunite alpha du recepteur heterodimere pour l'antigene de ce clone cellule T
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- 1984
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11. Activation of a translocated human c-myc gene by an enhancer in the immunoglobulin heavy-chain locus
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Charles E. Wood, Klas Wiman, William S. Hayward, Haruo Saito, Adrian Hayday, Stephen D. Gillies, and Susumu Tonegawa
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Regulation of gene expression ,Multidisciplinary ,Base Sequence ,Lymphoma ,Transcription, Genetic ,Chromosomal translocation ,Locus (genetics) ,Promoter ,Biology ,Molecular biology ,Translocation, Genetic ,Gene Expression Regulation ,Transcription (biology) ,hemic and lymphatic diseases ,Genes, Regulator ,Humans ,Immunoglobulin heavy chain ,RNA, Messenger ,Immunoglobulin Heavy Chains ,Enhancer ,Gene - Abstract
A tissue-specific transcriptional enhancer element that is associated with the human immunoglobulin heavy-chain locus is defined. In a non-Hodgkin's lymphoma that contains a translocated c-myc gene this enhancer is retained on the 14q+ chromosome and occurs within sequences shown to activate previously cryptic promoters of the c-myc gene.
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- 1984
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12. Blockage of αβ T-cell development by TCR γδ transgenes
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Motoya Katsuki, Peter Mombaerts, Sjef Verbeek, A Berns, Marc Bonneville, I Ishida, and Susumu Tonegawa
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Genetically modified mouse ,Multidisciplinary ,Chemistry ,Transgene ,T cell ,T-cell receptor ,T lymphocyte ,Cell biology ,medicine.anatomical_structure ,Antigen ,Immunology ,medicine ,Receptor ,Psychological repression - Abstract
T LYMPHOCYTES recognize antigens by means of T-cell receptors (TCR) composed of αβ (refs 1–3) or γδ heterodimers4–6. The mechanism governing the development of αβ- and γδ-bearing T cells from a common precursor T cell is so far unknown. It has been proposed that T-cell precursors rearrange their γ- and δ-chain genes first, and αβ T cells are generated only from those cells that fail to rearrange productively both γ- and δ-chain genes7,8. Our recent study on γδ-transgenic mice contradicted this hypothesis, however, and indicated that repression of γ-chain gene expression mediated by a transcriptional silencer element has a critical role in the generation of αβ T cells9. Here we report that the generation of a αβ T cells is severely blocked in transgenic mice carrying γ- and δ-chain transgenes without the associated silencer, thereby strengthening the validity of the silencer model of T-cell development.
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- 1989
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13. Unusual organization and diversity of T-cell receptor a-chain genes
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Adrian Hayday, Gary Tanigawa, Susumu Tonegawa, Don J. Diamond, Haruo Saito, Joseph S. Heilig, and Virginia Folsom
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Cytotoxicity, Immunologic ,Macromolecular Substances ,T-Lymphocytes ,Protein subunit ,Receptors, Antigen, T-Cell ,Biology ,Major histocompatibility complex ,Major Histocompatibility Complex ,Mice ,Complementary DNA ,Animals ,Gene family ,Cloning, Molecular ,Gene ,Genetics ,Multidisciplinary ,Base Sequence ,T-cell receptor ,Protein primary structure ,Nucleic acid sequence ,DNA ,DNA Restriction Enzymes ,Embryo, Mammalian ,Molecular biology ,Clone Cells ,Mice, Inbred C57BL ,Genes ,biology.protein - Abstract
T lymphocytes recognize cell-bound antigens in the molecular context of the self major histocompatibility complex (MHC) gene products through the surface T-cell receptor(s). The minimal component of the T-cell receptor is a heterodimer composed of alpha and beta subunits, each of relative molecular mass (Mr) approximately 45,000 (refs 1-3). Recently, complementary DNA clones encoding these subunits have been isolated and characterized along with that of a third subunit of unknown function, termed gamma (refs 4-9). These studies revealed a primary structure for each subunit that was clearly similar to that of immunoglobulin and indicated a somatic rearrangement of corresponding genes that are also immunoglobulin-like. Recently, the analysis of the sequence organization of the T-cell receptor beta-chain and T-cell-specific gamma-chain gene families has been reported. We now present an initial characterization of the murine T-cell receptor alpha-chain gene family, and conclude that although it is clearly related to the gene families encoding immunoglobulins, T-cell receptor beta-chains and also T-cell gamma-chains, it shows unique characteristics. There is only a single constant (C) region gene segment, which is an exceptionally large distance (approximately 20-40 kilobases (kb) in the cases studied here) from joining (J) gene segments. In addition, the J cluster and the variable (V) segment number seen to be very large. Finally, in the case studied here, a complete alpha-chain gene shows no somatic mutation and can be assembled directly from V alpha, J alpha and C alpha segments without inclusion of diversity (D alpha) segments.
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- 1985
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14. Domains and the hinge region of an immunoglobulin heavy chain are encoded in separate DNA segments
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John H. Rogers, Susumu Tonegawa, Randolph Wall, Hitoshi Sakano, Christine Brack, Konrad Hüppi, Richard A. Maki, and André Traunecker
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Genetic Linkage ,Immunoglobulin gamma-Chains ,Protein domain ,DNA, Recombinant ,Nucleotide sequencing ,Sequence (biology) ,Biology ,Mice ,chemistry.chemical_compound ,Cellular dna ,Animals ,Multidisciplinary ,Base Sequence ,Biological Evolution ,Molecular biology ,Myeloma Proteins ,Genes ,chemistry ,Mutation ,biology.protein ,Immunoglobulin heavy chain ,Chromosome Deletion ,Hinge region ,Antibody ,Immunoglobulin Heavy Chains ,DNA - Abstract
A 6.8-kilobase DNA fragment containing the sequence coding for the constant region of the mouse immunoglobulin gamma1 heavy chain was cloned from total cellular DNA. Electron microscopic and nucleotide sequencing studies showed that the three protein domains and the hinge region are encoded in separate DNA segments.
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- 1979
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15. Cell-type-specific contacts to immunoglobulin enhancers in nuclei
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Walter Gilbert, George M. Church, Anne Ephrussi, and Susumu Tonegawa
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Immunoglobulin gene ,Guanine ,Base pair ,Sulfuric Acid Esters ,Biology ,DNA-binding protein ,Cell Line ,Mice ,chemistry.chemical_compound ,L Cells ,Transcription (biology) ,Genes, Regulator ,Animals ,Enhancer ,Gene ,Cell Nucleus ,Multidisciplinary ,Base Sequence ,Promoter ,Molecular biology ,DNA-Binding Proteins ,Enhancer Elements, Genetic ,Gene Expression Regulation ,chemistry ,Immunoglobulin Heavy Chains ,DNA ,Plasmacytoma ,Protein Binding - Abstract
The introns separating the variable and constant regions of active immunoglobulin genes contain tissue-specific transcriptional enhancer elements, DNA segments which act in cis in an orientation- and distance-independent (up to a few kilobases (kb)) manner to enhance transcription initiation at adjacent promoters. The immunoglobulin heavy-chain enhancer is active only in lymphoid cells: in transfection assays it is capable of controlling in cis transcription from the simian virus 40 (SV40) T-antigen, rabbit beta-globin and immunoglobulin gene promoters up to at least 2 kb away. Genetic deletion analysis suggests that a region of as few as 140 base pairs (bp) is sufficient for the enhancement effect. These functional characteristics and DNA sequences are conserved between mouse and man. However, it is not known whether tissue-specific proteins bind to the enhancer. Proteins that interact with DNA at specific sequences can prevent or enhance the reactions of individual guanines or adenines with dimethyl sulphate (DMS), and this property has been used to display the DNA contacts of various regulatory proteins. Here we apply this DMS strategy in experiments involving single-copy genes within intact mammalian nuclei using genomic sequencing.
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- 1985
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16. Sequences at the somatic recombination sites of immunoglobulin light-chain genes
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Susumu Tonegawa, Gunther Heinrich, Konrad Hüppi, and Hitoshi Sakano
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Biology ,DNA sequencing ,Immunoglobulin kappa-Chains ,Mice ,chemistry.chemical_compound ,Animals ,Recombination signal sequences ,Somatic recombination ,Gene ,Recombination, Genetic ,Genetics ,Mice, Inbred BALB C ,Multidisciplinary ,Base Sequence ,Mice, Inbred NZB ,Nucleic acid sequence ,Antibody Diversity ,DNA ,Neoplasms, Experimental ,Molecular biology ,Myeloma Proteins ,Genes ,chemistry ,Genetic Code ,Immunoglobulin Light Chains ,In vitro recombination - Abstract
The entire nucleotide sequence of a 1.7-kilobase embryonic DNA fragment containing five joining (J) DNA segments for mouse immunoglobulin kappa chain gene has been determined. Each J DNA segment can encode amino acid residues 96--108. Comparison of one of the five J DNA sequences with those of an embryonic variable (V) gene and a complete kappa chain gene permitted localisation of a precise recombination site. The 5'-flanking regions of J DNA segments could form an inverted stem structure with the 3'-non-coding region of embryonic V genes. This hypothetical structure and gel-blotting analysis of total embryo and myeloma DNA suggest that the somatic recombination may be accompanied by excision of an entire DNA segment between a V gene and a J DNA segment. Antibody diversity may in part be generated by modulation of the precise recombination sites.
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- 1979
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17. Diversity of γδ T-cell receptors on murine intestinal intraepithelial lymphocytes
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Yohtaroh Takagaki, Amy DeCloux, Susumu Tonegawa, and Marc Bonneville
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Multidisciplinary ,Epidermis (botany) ,Somatic cell ,Immunology ,T-cell receptor ,Intraepithelial lymphocyte ,chemical and pharmacologic phenomena ,T lymphocyte ,Biology ,Receptor ,Intestinal epithelium ,Gene ,Molecular biology - Abstract
THE search for the genes encoding the T-cell receptor (TCR)α -and β-subunits revealed a third gene γ which shares with the α-and βgenes several properties including somatic rearrangement1,2. This gene, together with a fourth rearranging gene δ3,4, encodes a second type of T-cell receptor, TCR γδ5–8. Although TCR γδ-bearing T cells constitute a relatively minor subpopulation in the thymus and in peripheral lymphoid organs8,9, they are the major lymphocytes of epidermis (dendritic epidermal cells or DEC)10 and of intestinal epithelium (intestinal intraepithelial lymphocytes or IEL) in mice11,12, suggesting that at least some γδ T cells are important in the surveillance of a variety of epithelia13. It was recently reported, however, that the TCR γδ on DEC has essentially no structural diversity, implying that the putative ligand is monomorphic14. As this finding, if generally applicable, poses severe restrictions on the origin of the ligand, we investigated the diversity of the TCR on the second major epithelium-associated γδ T cells, namely IEL from mice. We report here that by contrast with the DEC γδ, the IEL γδTCR are structurally diverse.
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- 1989
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18. Intestinal intraepithelial lymphocytes are a distinct set of γδ T cells
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Marc Bonneville, N. Nakanishi, Janeway Ca, Kouichi Ito, Susumu Tonegawa, Haser W, and I Ishida
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Multidisciplinary ,biology ,Gamma/Delta T-Lymphocyte ,Lymphocyte ,CD3 ,T lymphocyte ,Major histocompatibility complex ,Molecular biology ,medicine.anatomical_structure ,Antigen ,Immunology ,biology.protein ,medicine ,Intraepithelial lymphocyte ,CD8 - Abstract
Lymphocytes are most reliably subdivided on the basis of their receptors for antigen at the cell surface. Three subtypes of lymphocytes are well defined: B cells that bear surface immunoglobulin and make antibody, CD4+T cells with CD3 alpha beta receptors specific for antigen associated with class II major histocompatibility complex molecules, and CD8+T cells with CD3 alpha beta receptors specific for antigen associated with class I MHC molecules. These T cells are responsible for known forms of cell-mediated immunity. The discovery of a third rearranging T-cell specific gene called gamma (refs 1 and 2) has revealed the presence of a new class of T cells bearing a new receptor type, CD3 gamma delta (refs 3-7). To date, neither the function nor the specificity of cells bearing this receptor has been determined. Because gamma delta T cells are the main lymphocyte of epidermis, it was proposed that such cells could be important in surveillance of all epithelia. We have isolated intraepithelial lymphocytes from murine small intestine, and shown that they predominantly or exclusively express CD3 gamma delta receptors. Unlike the epidermal lymphocytes, these cells also express CD8, and they use a different V lambda gene to form their receptor. This strongly suggests that gamma delta T cells home in a very specific manner to epithelia, where they presumably mediate their function.
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- 1988
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19. A functional γ gene formed from known γ-gene segments is not necessary for antigen-specific responses of murine cytotoxic T lymphocytes
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Edward B. Reilly, Susumu Tonegawa, Herman N. Eisen, and David M. Kranz
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Mice, Inbred BALB C ,Multidisciplinary ,Base Sequence ,Transcription, Genetic ,T cell ,Receptors, Antigen, T-Cell ,DNA ,Gene rearrangement ,T lymphocyte ,Biology ,Molecular biology ,Cell Line ,Clone Cells ,Mice ,medicine.anatomical_structure ,Genes ,Cell surface receptor ,Complementary DNA ,medicine ,Animals ,Cytotoxic T cell ,Gene ,B cell ,T-Lymphocytes, Cytotoxic - Abstract
Structural similarities between surface immunoglobulins (s Ig) on B cells and antigen-specific receptors on T cells suggest that a T cell, like a B cell, should express only two immunoglobulin-like genes, one for each subunit of the disulphide-linked, heterodimeric, antigen-specific (alpha beta) T-cell receptor. However, cytotoxic T lymphocytes (Tc cells) and immature thymocytes also contain RNA transcripts of a third immunoglobulin-like gene, called gamma (refs 1-4). A polypeptide corresponding to the gamma gene has not yet been identified and the function of this gene remains an enigma. Judging from its nucleotide sequence, the rearranged gamma gene is expected to encode an integral membrane polypeptide chain, and gamma complementary DNAs from two cloned Tc cell lines have previously been found to have different sequences around the V-J (variable region-joining region) junction, suggesting that, in these cells, the gamma-gene product is a clonally diverse surface structure that may form part of an as yet unidentified, antigen-specific receptor. To analyse further the extent of diversity of the gamma-gene product, we have determined the partial sequences of 11 gamma cDNA clones from three other cloned Tc cell lines, and report here that the sequences are indeed clonally diverse, but in all instances they are out-of-phase in the region of the V-J junction. This finding and the pattern of gamma-gene rearrangements in these cell lines indicate that a polypeptide product of the previously reported gamma gene, V2J2-C2, is not expressed in them and is, therefore, not necessary for the antigen-specific cytotoxic and proliferative responses of these mature T cells.
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- 1986
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20. V and C parts of immunoglobulin kappa-chain genes are separate in myeloma
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Susumu Tonegawa and G Matthyssens
- Subjects
Immunoglobulin gene ,Genetic Linkage ,Immunoglobulin Variable Region ,Immunoglobulin light chain ,chemistry.chemical_compound ,Immunoglobulin kappa-Chains ,Mice ,RNA polymerase ,Animals ,RNA, Messenger ,Gene ,Messenger RNA ,Nuclease ,Multidisciplinary ,biology ,Nucleic Acid Hybridization ,Neoplasms, Experimental ,Molecular biology ,Molecular Weight ,Myeloma Proteins ,chemistry ,Biochemistry ,Genes ,biology.protein ,Nucleic acid ,Immunoglobulin Light Chains ,Binding Sites, Antibody ,DNA ,Plasmacytoma - Abstract
DNA SEGMENTS coding for amino terminal and carboxyl terminal half of immunoglobulin chains are separate in the embryo, and specific rearrangement in these DNA segments occurs during differentiation of lymphocytes1–3. Although the simplest model would be that the rearrangement brings a V gene in contiguity with a C gene, thereby allowing RNA polymerase to transcribe a whole immunoglobulin gene continuously, it has not been directly shown that this is really the case. One way to study this problem and which we report here is to hybridise DNA from a plasmacytoma with a purified light chain mRNA in conditions which would not permit renaturation of the gene segments, digest all single-stranded nucleic acid with single strand specific nuclease S1 (ref. 4), and determine the size of the DNA segment which was protected by the mRNA from digestion with S1 nuclease. Using the fact that the length of the immunoglobulin mRNA and its two regions corresponding to V and C genes are known with considerable accuracy5,6, we have been able to determine that V and C genes are not contiguous.
- Published
- 1978
21. Somatic generation of antibody diversity
- Author
-
Susumu Tonegawa
- Subjects
Genetics ,Mutation ,Base Composition ,Multidisciplinary ,Base Sequence ,V(D)J recombination ,Immunoglobulins ,Antibody Diversity ,Biology ,medicine.disease_cause ,Junctional diversity ,Recombination-activating gene ,Antibodies ,Genes ,RAG2 ,medicine ,DNA Transposable Elements ,Animals ,Humans ,Immunoglobulin Gene Rearrangement ,Somatic recombination - Abstract
In the genome of a germ-line cell, the genetic information for an immunoglobulin polypeptide chain is contained in multiple gene segments scattered along a chromosome. During the development of bone marrow-derived lymphocytes, these gene segments are assembled by recombination which leads to the formation of a complete gene. In addition, mutations are somatically introduced at a high rate into the amino-terminal region. Both somatic recombination and mutation contribute greatly to an increase in the diversity of antibody synthesized by a single organism.
- Published
- 1983
22. Expression of the T-cell-specific gamma gene is unnecessary in T cells recognizing class II MHC determinants
- Author
-
Laurie H. Glimcher, Joseph S. Heilig, David M. Kranz, Linda K. Clayton, Haruo Saito, Steven J. Burakoff, Allan M. Maxam, Julia L. Greenstein, Susumu Tonegawa, and Herman N. Eisen
- Subjects
Transcription, Genetic ,T cell ,Immunoglobulin gamma-Chains ,T-Lymphocytes ,Major histocompatibility complex ,Major Histocompatibility Complex ,Epitopes ,Mice ,Complementary DNA ,MHC class I ,medicine ,Cytotoxic T cell ,Animals ,Cloning, Molecular ,Gene ,Genetics ,Multidisciplinary ,Hybridomas ,biology ,Base Sequence ,cDNA library ,Nucleic Acid Hybridization ,DNA ,MHC restriction ,Molecular biology ,medicine.anatomical_structure ,Genes ,biology.protein ,Immunoglobulin Heavy Chains - Abstract
Subtractive complementary DNA cloning combined with partial protein sequencing has allowed identification of the genes encoding the alpha and beta subunits of T-cell receptors. The subtractive cDNA library prepared from the cytotoxic T lymphocyte (Tc) clone 2C has been found to contain a third type of clone encoding the gamma chain. The gamma gene shares several features with the alpha and beta genes: (1) assembly from gene segments resembling immunoglobulin V, J and C (respectively variable, joining and constant region) DNA segments; (2) rearrangement and expression in T cells and not in B cells; (3) sequences reminiscent of transmembrane and intracytoplasmic regions of integral membrane proteins; (4) a cysteine residue at the position expected for an interchain disulphide bond. The alpha and beta genes are expressed at equivalent levels in both Tc cells and helper T cells (TH). The gamma gene, obtained from 2C, has been found to be expressed in all Tc cells studied. Here we present evidence that strongly suggests that TH cells do not require gamma gene expression.
- Published
- 1985
23. Two types of somatic recombination are necessary for the generation of complete immunoglobulin heavy-chain genes
- Author
-
Susumu Tonegawa, Hitoshi Sakano, Richard A. Maki, William Roeder, and Yoshikazu Kurosawa
- Subjects
Genetics ,Recombination, Genetic ,Multidisciplinary ,Base Sequence ,Immunoglobulin mu-Chains ,Immunoglobulin gamma-Chains ,Immunoglobulin Variable Region ,Nucleic Acid Precursors ,Biology ,Immunoglobulin Switch Region ,Recombination-activating gene ,DNA sequencing ,Mice ,Myeloma Proteins ,Immunoglobulin class switching ,Genes ,Immunoglobulin heavy chain ,Animals ,Somatic recombination ,Immunoglobulin Constant Regions ,Immunoglobulin Heavy Chains ,Gene ,Recombination - Abstract
At least two types of somatic recombination are necessary for the generation of a complete immunoglobulin gamma 2b gene from germ-line DNA sequences. The first type of recombination consists of the assembly of three separate DNA segments, each encoding a different part of the variable region. The second type of recombination replaces the exons coding for the constant region of the mu chain with those coding for the same region of the gamma 2b chain. The DNA sequencing studies suggest that the two types of recombination operate by different mechanisms.
- Published
- 1980
24. Cell type-specific enhancer element associated with a mouse MHC gene, E beta
- Author
-
Virginia Folsom, Stephen D. Gillies, and Susumu Tonegawa
- Subjects
Transcription, Genetic ,Cell ,Enhancer RNAs ,Major histocompatibility complex ,Transfection ,Major Histocompatibility Complex ,Mice ,Plasmid ,medicine ,Animals ,Amino Acid Sequence ,RNA, Messenger ,Beta (finance) ,Enhancer ,Gene ,Multidisciplinary ,biology ,Base Sequence ,Chemistry ,DNA Restriction Enzymes ,Cell biology ,medicine.anatomical_structure ,Genes ,biology.protein ,Immunoglobulin Heavy Chains ,Plasmids - Abstract
Class II molecules of the major histocompatibility complex (MHC) are heterodimeric glycoproteins expressed on the surface of antigen-presenting B lymphocytes and macrophages. The genes encoding the alpha- and beta-chains of the class II heterodimers, A alpha A beta and E alpha E beta, have recently been characterized at the molecular level, and certain cloned genes were shown to be functionally expressed after introduction into cells by DNA-mediated gene transfer. One study found that a transfected Eb beta gene was expressed in a macrophage cell only after treatment of cells with gamma-interferon. DNA sequences associated with transfected Class II MHC genes may therefore have a regulatory role in their cell type-specific expression. We report here the identification of a cell type-specific transcriptional enhancer element associated with the mouse Ed beta gene.
- Published
- 1984
25. Developmental regulation of T-cell receptor gene expression
- Author
-
Susumu Tonegawa, Haruo Saito, Richard D. Garman, and David H. Raulet
- Subjects
Macromolecular Substances ,Cellular differentiation ,T-Lymphocytes ,Receptors, Antigen, T-Cell ,Thymus Gland ,Major histocompatibility complex ,Mice ,Antigen ,Cell surface receptor ,Gene expression ,Animals ,RNA, Messenger ,Receptor ,Genetics ,Multidisciplinary ,biology ,Nucleic Acid Hybridization ,Cell Differentiation ,DNA Restriction Enzymes ,MHC restriction ,Cell biology ,Gene Expression Regulation ,Genes ,T-Cell Receptor Gene ,Antigens, Surface ,biology.protein - Abstract
In contrast to B cells or their antibody products, T lymphocytes have a dual specificity, for both the eliciting foreign antigen and for polymorphic determinants on cell surface glycoproteins encoded in the major histocompatibility complex (MHC restriction). The recent identification of T-cell receptor glycoproteins as well as the genes encoding T-cell receptor subunits will help to elucidate whether MHC proteins and foreign antigens are recognized by two T-cell receptors or by a single receptor. An important feature of MHC restriction is that it appears to be largely acquired by a differentiating T-cell population under the influence of MHC antigens expressed in the thymus, suggesting that precursor T cells are selected on the basis of their reactivity with MHC determinants expressed in the host thymus. To understand this process of 'thymus education', knowledge of the developmental regulation of T-cell receptor gene expression is necessary. Here we report that whereas messenger RNAs encoding the beta-and gamma-subunits are relatively abundant in immature thymocytes, alpha mRNA levels are very low. Interestingly, whereas alpha mRNA levels increase during further development and beta mRNA levels stay roughly constant, gamma mRNA falls to very low levels in mature T cells, suggesting a role for the gamma gene in T-cell differentiation.
- Published
- 1985
26. Identification of D segments of immunoglobulin heavy-chain genes and their rearrangement in T lymphocytes
- Author
-
Werner Haas, André Trauneker, Harald von Boehmer, Hitoshi Sakano, Yoshikazu Kurosawa, and Susumu Tonegawa
- Subjects
Cytotoxicity, Immunologic ,Somatic cell ,T cell ,T-Lymphocytes ,Immunoglobulin Variable Region ,Receptors, Antigen, T-Cell ,Biology ,chemistry.chemical_compound ,Mice ,Antigen ,Recombinase ,medicine ,Animals ,Gene ,Genetics ,Recombination, Genetic ,Multidisciplinary ,Base Sequence ,Antibody Diversity ,Embryo, Mammalian ,Molecular biology ,medicine.anatomical_structure ,chemistry ,biology.protein ,Binding Sites, Antibody ,Antibody ,Chromosome Deletion ,Immunoglobulin Heavy Chains ,DNA - Abstract
The finding that the diversity (D) and joining (JH) but not the variable (VH) DNA segments of mouse immunoglobulin heavy-chain genes are joined in the DNA of some cloned cytolytic T cells, led to identification and sequencing of three different D DNA segments. Two segments identified on the embryo DNA carry on both the 5' and 3' sides two sets of characteristic sequences separated by a 12-base pair spacer, which have been implicated as recognition signals for a recombinase. The third segment, identified in a form joined with a JHDNA segment in a T cell, carries the recognition signal on the 5' side. These results support the 12/23-base pair model for somatic generation of immunoglobulin V genes, and rule out the possibility that the cytolytic T cells use assembled VH, D and JH sequences to encode their antigen receptors.
- Published
- 1981
27. Identification and nucleotide sequence of a diversity DNA segment (D) of immunoglobulin heavy-chain genes
- Author
-
Yoshikazu Kurosawa, Hitoshi Sakano, Susumu Tonegawa, and Martin Weigert
- Subjects
Genetics ,Recombination, Genetic ,Multidisciplinary ,Base pair ,Nucleic acid sequence ,Immunoglobulin Variable Region ,Biology ,Genome ,chemistry.chemical_compound ,Allelic exclusion ,Mice ,Myeloma Proteins ,chemistry ,Genes ,Recombinase ,Immunoglobulin heavy chain ,Animals ,Binding Sites, Antibody ,Chromosome Deletion ,Immunoglobulin Heavy Chains ,Gene ,DNA ,Alleles - Abstract
A putative diversity segment of immunoglobulin heavy-chain genes (D segments) has been identified 700 base pairs 5' to JH1 DNA on the germ-line genome of the mouse. This 10-base pair D segment is flanked by two sets of sequences related to (SEE FORMULAR IN TEXT) which are possible recognition sites for a recombinase. The spacer separating the heptamer and the nonamer is 12 base pairs long on both sides of the D segment. As the space separating the two signal sequences in VH DNAs and JH DNAs is 23 +/- 1 base pairs long, the two recombinations required for creation of a complete immunoglobulin VH gene, a VH--D joining and a D--JH joining, follow a 12/23-base pair spacer rule. Allelic exclusion is discussed with respect to D segments.
- Published
- 1981
28. Limited diversity of the rearranged T-cell gamma gene
- Author
-
Susumu Tonegawa, Herman N. Eisen, Haruo Saito, Yohtaroh Takagaki, David M. Kranz, Mark Heller, and Werner Haas
- Subjects
Transcription, Genetic ,Cellular differentiation ,T cell ,T-Lymphocytes ,Receptors, Antigen, T-Cell ,Thymus Gland ,Biology ,Mice ,Antigen ,Transcription (biology) ,medicine ,Cytotoxic T cell ,Animals ,Amino Acid Sequence ,Gene ,Genetics ,Recombination, Genetic ,Multidisciplinary ,Base Sequence ,Cell Differentiation ,T lymphocyte ,Gene rearrangement ,Molecular biology ,medicine.anatomical_structure ,Genes ,Spleen ,T-Lymphocytes, Cytotoxic - Abstract
The immunoglobulin-related, T-cell specific gamma gene is rearranged in a wide variety of murine T lymphocytes. We detected gamma-gene transcripts in all cloned cytotoxic T lymphocytes examined but in only 1 of 11 T-helper cell lines or hybridomas. Although in cytotoxic T cells, the rearranged gamma gene seems to have been assembled from the same germ-line variable and joining gene segments, the transcribed gene exhibited distinct sequence diversity near the junction between these segments.
- Published
- 1985
29. T gamma protein is expressed on murine fetal thymocytes as a disulphide-linked heterodimer
- Author
-
Keiji Maeda, Ko-ichi Ito, Susumu Tonegawa, Mark Heller, and Nobuki Nakanishi
- Subjects
Antigens, Differentiation, T-Lymphocyte ,Macromolecular Substances ,Recombinant Fusion Proteins ,T-Lymphocytes ,Receptors, Antigen, T-Cell ,Biology ,Mice ,Fetus ,Gene expression ,Cytotoxic T cell ,Animals ,Disulfides ,Antigens ,Cloning, Molecular ,Gene ,Integral membrane protein ,Immunosorbent Techniques ,Multidisciplinary ,Expression vector ,Immune Sera ,beta-Galactosidase ,Fusion protein ,Molecular biology ,Transmembrane protein ,Molecular Weight ,Thymocyte ,Antigens, Surface ,RNA - Abstract
During the search for genes coding for the mouse alpha and beta subunits of the antigen-specific receptor of mouse T cells we encountered a third gene, subsequently designated gamma. This gene has many properties in common with the alpha and beta genes, somatic assembly from gene segments that resemble the gene segments for immunoglobulin variable (V), joining (J) and constant (C) regions; rearrangement and expression in T cells and not in B cells; low but distinct sequence homology to immunoglobulin V, J and C regions; other sequences that are reminiscent of the transmembrane and intracytoplasmic regions of integral membrane proteins; and a cysteine residue at the position expected for a disulphide bond linking two subunits of a dimeric membrane protein. Despite these similarities the gamma gene also shows some interesting unique features. These include a relatively limited repertoire of the germ-line gene segments, more pronounced expression at the RNA level in immature T cells such as fetal thymocytes and an apparent absence of in-frame RNA in some functional, alpha beta heterodimer-bearing T cells or cultured T clones and hybridomas. To understand the function of the putative gamma protein it is essential to define the cell population that expresses this protein. To this end we produced a fusion protein composed of Escherichia coli beta-galactosidase and the gamma-chain (hereafter referred to a beta-gal-gamma) using the phage expression vector lambda gt11 and raised rabbit antisera against the gamma determinants. Using the purified anti-gamma antibody we detected a polypeptide chain of relative molecular mass 35,000 (Mr 35K) on the surface of 16-day old fetal thymocytes. The gamma-chain is linked by a disulphide bridge to another component of 45K. No such heterodimer was detected on the surface of a cytotoxic T lymphocyte (CTL) clone 2C from which an in-phase gamma cDNA clone was originally isolated.
- Published
- 1987
30. Complete primary structure of a heterodimeric T-cell receptor deduced from cDNA sequences
- Author
-
Herman N. Eisen, Adrian Hayday, Susumu Tonegawa, Yohtaroh Takagaki, Haruo Saito, and David M. Kranz
- Subjects
Multidisciplinary ,Base Sequence ,Macromolecular Substances ,T cell ,T-cell receptor ,Protein primary structure ,Immunoglobulin Variable Region ,Receptors, Antigen, T-Cell ,DNA ,DNA Restriction Enzymes ,Biology ,Molecular biology ,Homology (biology) ,medicine.anatomical_structure ,Antigen ,Genes ,Complementary DNA ,medicine ,Cytotoxic T cell ,Animals ,Humans ,Amino Acid Sequence ,Cloning, Molecular ,Immunoglobulin Constant Regions ,Peptide sequence - Abstract
Two related, but distinct, cDNA clones have been isolated and sequenced from a functional murine cytotoxic T-lymphocyte clone. The genes corresponding to these cDNA are expressed and rearranged specifically in T cells and both have similarities to immunoglobulin variable and constant region genes. It is concluded that these genes code for the two subunits of the heterodimeric antigen receptor on the surface of the T cell; its complete deduced primary structure is presented.
- Published
- 1984
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