12 results on '"Oxidation reactions"'
Search Results
2. Roles of the 2-Oxoglutarate-Dependent Dioxygenase Superfamily in the Flavonoid Pathway: A Review of the Functional Diversity of F3H, FNS I, FLS, and LDOX/ANS
- Author
-
Yueyue Wang, Yufeng Shi, Kaiyuan Li, Dong Yang, Nana Liu, Lingjie Zhang, Lei Zhao, Xinfu Zhang, Yajun Liu, Liping Gao, Tao Xia, and Peiqiang Wang
- Subjects
2-OGDs ,oxidation reactions ,functional redundancy ,evolutionary relationship ,flavonoid pathway ,Organic chemistry ,QD241-441 - Abstract
The 2-oxoglutarate-dependent dioxygenase (2-OGD) superfamily is one of the largest protein families in plants. The main oxidation reactions they catalyze in plants are hydroxylation, desaturation, demethylation, epimerization, and halogenation. Four members of the 2-OGD superfamily, i.e., flavonone 3β-hydroxylase (F3H), flavones synthase I (FNS I), flavonol synthase (FLS), and anthocyanidin synthase (ANS)/leucoanthocyanidin dioxygenase (LDOX), are present in the flavonoid pathway, catalyzing hydroxylation and desaturation reactions. In this review, we summarize the recent research progress on these proteins, from the discovery of their enzymatic activity, to their functional verification, to the analysis of the response they mediate in plants towards adversity. Substrate diversity analysis indicated that F3H, FNS Ⅰ, ANS/LDOX, and FLS perform their respective dominant functions in the flavonoid pathway, despite the presence of functional redundancy among them. The phylogenetic tree classified two types of FNS Ⅰ, one mainly performing FNS activity, and the other, a new type of FNS present in angiosperms, mainly involved in C-5 hydroxylation of SA. Additionally, a new class of LDOXs is highlighted, which can catalyze the conversion of (+)-catechin to cyanidin, further influencing the starter and extension unit composition of proanthocyanidins (PAs). The systematical description of the functional diversity and evolutionary relationship among these enzymes can facilitate the understanding of their impacts on plant metabolism. On the other hand, it provides molecular genetic evidence of the chemical evolution of flavonoids from lower to higher plants, promoting plant adaptation to harsh environments.
- Published
- 2021
- Full Text
- View/download PDF
3. Intracluster Sulphur Dioxide Oxidation by Sodium Chlorite Anions: A Mass Spectrometric Study
- Author
-
Chiara Salvitti, Federico Pepi, Anna Troiani, and Giulia de Petris
- Subjects
cluster reactivity ,sulphur dioxide ,sodium chlorite ,mass spectrometry ,ion-molecule reactions ,oxidation reactions ,Organic chemistry ,QD241-441 - Abstract
The reactivity of [NaL·ClO2]− cluster anions (L = ClOx−; x = 0–3) with sulphur dioxide has been investigated in the gas phase by ion–molecule reaction experiments (IMR) performed in an in-house modified Ion Trap mass spectrometer (IT-MS). The kinetic analysis revealed that SO2 is efficiently oxidised by oxygen-atom (OAT), oxygen-ion (OIT) and double oxygen transfer (DOT) reactions. The main difference from the previously investigated free reactive ClO2− is the occurrence of intracluster OIT and DOT processes, which are mediated by the different ligands of the chlorite anion. This gas-phase study highlights the importance of studying the intrinsic properties of simple reacting species, with the aim of elucidating the elementary steps of complex processes occurring in solution, such as the oxidation of sulphur dioxide.
- Published
- 2021
- Full Text
- View/download PDF
4. Functionalized Hydroperoxide Formation from the Reaction of Methacrolein-Oxide, an Isoprene-Derived Criegee Intermediate, with Formic Acid: Experiment and Theory
- Author
-
Michael F. Vansco, Kristen Zuraski, Frank A. F. Winiberg, Kendrew Au, Nisalak Trongsiriwat, Patrick J. Walsh, David L. Osborn, Carl J. Percival, Stephen J. Klippenstein, Craig A. Taatjes, Marsha I. Lester, and Rebecca L. Caravan
- Subjects
reaction intermediates ,oxidation reactions ,reaction pathways ,kinetics ,mass spectrometry ,ionization ,Organic chemistry ,QD241-441 - Abstract
Methacrolein oxide (MACR-oxide) is a four-carbon, resonance-stabilized Criegee intermediate produced from isoprene ozonolysis, yet its reactivity is not well understood. This study identifies the functionalized hydroperoxide species, 1-hydroperoxy-2-methylallyl formate (HPMAF), generated from the reaction of MACR-oxide with formic acid using multiplexed photoionization mass spectrometry (MPIMS, 298 K = 25 °C, 10 torr = 13.3 hPa). Electronic structure calculations indicate the reaction proceeds via an energetically favorable 1,4-addition mechanism. The formation of HPMAF is observed by the rapid appearance of a fragment ion at m/z 99, consistent with the proposed mechanism and characteristic loss of HO2 upon photoionization of functional hydroperoxides. The identification of HPMAF is confirmed by comparison of the appearance energy of the fragment ion with theoretical predictions of its photoionization threshold. The results are compared to analogous studies on the reaction of formic acid with methyl vinyl ketone oxide (MVK-oxide), the other four-carbon Criegee intermediate in isoprene ozonolysis.
- Published
- 2021
- Full Text
- View/download PDF
5. New Copper(II) Coordination Compounds Assembled from Multifunctional Pyridine-Carboxylate Blocks: Synthesis, Structures, and Catalytic Activity in Cycloalkane Oxidation
- Author
-
Na Zhao, Yu Li, Jinzhong Gu, Tiago A. Fernandes, Marina V. Kirillova, and Alexander M. Kirillov
- Subjects
hydrothermal synthesis ,crystal structure ,coordination polymers ,self-assembly ,catalysis ,alkanes ,cyclohexane ,oxidation reactions ,hydrogen peroxide ,Organic chemistry ,QD241-441 - Abstract
Two new copper(II) coordination compounds, namely a 1D coordination polymer [Cu(µ-cpna)(phen)(H2O)]n (1) and a discrete tetracopper(II) derivative [Cu(phen)2(H2O)]2[Cu2(µ-Hdppa)2(Hdppa)2] (2), were hydrothermally synthesized from copper(II) chloride as a metal source, 5-(4-carboxyphenoxy)nicotinic acid (H2cpna) or 5-(3,4-dicarboxylphenyl)picolinic acid (H3dppa) as a principal building block, and 1,10-phenanthroline (phen) as a crystallization mediator. Compounds 1 and 2 were isolated as air-stable microcrystalline solids and fully characterized by elemental and thermogravimetric analyses, IR spectroscopy, powder and single-crystal X-ray diffraction. In the solid state, the structure of 1 discloses the linear interdigitated 1D coordination polymer chains with the 2C1 topology. The crystal structure of an ionic derivative 2 shows that the mono- and dicopper(II) units are extended into the intricate 1D hydrogen-bonded chains with the SP 1-periodic net (4,4)(0,2) topology. Thermal stability and catalytic properties of 1 and 2 were also investigated. In fact, both Cu derivatives act as efficient homogeneous catalysts (catalyst precursors) for the mild oxidation of cycloalkanes by hydrogen peroxide to give the corresponding alcohols and ketones; the substrate scope and the effects of type and amount of acid promoter as well as bond-, regio-, and stereo-selectivity features were investigated.
- Published
- 2018
- Full Text
- View/download PDF
6. Intracluster Sulphur Dioxide Oxidation by Sodium Chlorite Anions: A Mass Spectrometric Study
- Author
-
Anna Troiani, Federico Pepi, Chiara Salvitti, and Giulia de Petris
- Subjects
cluster reactivity ,sulphur dioxide ,sodium chlorite ,mass spectrometry ,ion-molecule reactions ,oxidation reactions ,Sodium chlorite ,Inorganic chemistry ,Pharmaceutical Science ,chemistry.chemical_element ,Organic chemistry ,Mass spectrometry ,Redox ,Article ,Analytical Chemistry ,Ion ,chemistry.chemical_compound ,QD241-441 ,Drug Discovery ,Reactivity (chemistry) ,Physical and Theoretical Chemistry ,Chlorite ,Sulfur ,chemistry ,Chemistry (miscellaneous) ,Molecular Medicine ,Ion trap - Abstract
The reactivity of [NaL·ClO2]− cluster anions (L = ClOx−; x = 0–3) with sulphur dioxide has been investigated in the gas phase by ion–molecule reaction experiments (IMR) performed in an in-house modified Ion Trap mass spectrometer (IT-MS). The kinetic analysis revealed that SO2 is efficiently oxidised by oxygen-atom (OAT), oxygen-ion (OIT) and double oxygen transfer (DOT) reactions. The main difference from the previously investigated free reactive ClO2− is the occurrence of intracluster OIT and DOT processes, which are mediated by the different ligands of the chlorite anion. This gas-phase study highlights the importance of studying the intrinsic properties of simple reacting species, with the aim of elucidating the elementary steps of complex processes occurring in solution, such as the oxidation of sulphur dioxide.
- Published
- 2021
7. Spectroelectrochemical Properties and Catalytic Activity in Cyclohexane Oxidation of the Hybrid Zr/Hf-Phthalocyaninate-Capped Nickel(II) and Iron(II) tris-Pyridineoximates and Their Precursors
- Author
-
Maria-Andreea Lungan, Svetlana A. Belova, Dumitru Samohvalov, Denisa Darvasiová, Armando J. L. Pombeiro, Vladimir B. Arion, Semyon V. Dudkin, Yan Z. Voloshin, Corina-Mihaela Manta, Peter Rapta, Samuel M. Meier-Menches, Michal Malček, Luísa M. D. R. S. Martins, and Daniel Gherca
- Subjects
Models, Molecular ,Indoles ,Clathrochelate ,Pyridines ,Pharmaceutical Science ,Isoindoles ,phthalocyanines ,DFT calculations ,01 natural sciences ,zirconium(IV) ,Analytical Chemistry ,law.invention ,chemistry.chemical_compound ,clathrochelates ,law ,Coordination Complexes ,Nickel ,Drug Discovery ,Oximes ,Electron paramagnetic resonance ,Density Functional Theory ,iron(II) ,homogeneous catalysis ,3. Good health ,Chemistry (miscellaneous) ,Molecular Medicine ,Oxidation-Reduction ,nickel(II) ,Cyclohexane ,Iron ,chemistry.chemical_element ,hafnium(IV) ,010402 general chemistry ,Redox ,Catalysis ,Article ,lcsh:QD241-441 ,Transition metal ,lcsh:Organic chemistry ,Cyclohexanes ,Polymer chemistry ,Physical and Theoretical Chemistry ,Zirconium ,oxidation reactions ,010405 organic chemistry ,Organic Chemistry ,Electron Spin Resonance Spectroscopy ,spectroelectrochemistry ,0104 chemical sciences ,chemistry ,Hafnium - Abstract
The in situ spectroelectrochemical cyclic voltammetric studies of the antimony-monocapped nickel(II) and iron(II) tris-pyridineoximates with a labile triethylantimony cross-linking group and Zr(IV)/Hf(IV) phthalocyaninate complexes were performed in order to understand the nature of the redox events in the molecules of heterodinuclear zirconium(IV) and hafnium(IV) phthalocyaninate-capped derivatives. Electronic structures of their 1e-oxidized and 1e-electron-reduced forms were experimentally studied by electron paramagnetic resonance (EPR) spectroscopy and UV&minus, vis&minus, near-IR spectroelectrochemical experiments and supported by density functional theory (DFT) calculations. The investigated hybrid molecular systems that combine a transition metal (pseudo)clathrochelate and a Zr/Hf-phthalocyaninate moiety exhibit quite rich redox activity both in the cathodic and in the anodic region. These binuclear compounds and their precursors were tested as potential catalysts in oxidation reactions of cyclohexane and the results are discussed.
- Published
- 2021
8. Intracluster Sulphur Dioxide Oxidation by Sodium Chlorite Anions: A Mass Spectrometric Study.
- Author
-
Salvitti, Chiara, Pepi, Federico, Troiani, Anna, and de Petris, Giulia
- Subjects
SULFUR dioxide ,GAS phase reactions ,ANIONS ,SODIUM ,MASS spectrometers - Abstract
The reactivity of [NaL·ClO
2 ]− cluster anions (L = ClOx − ; x = 0–3) with sulphur dioxide has been investigated in the gas phase by ion–molecule reaction experiments (IMR) performed in an in-house modified Ion Trap mass spectrometer (IT-MS). The kinetic analysis revealed that SO2 is efficiently oxidised by oxygen-atom (OAT), oxygen-ion (OIT) and double oxygen transfer (DOT) reactions. The main difference from the previously investigated free reactive ClO2 − is the occurrence of intracluster OIT and DOT processes, which are mediated by the different ligands of the chlorite anion. This gas-phase study highlights the importance of studying the intrinsic properties of simple reacting species, with the aim of elucidating the elementary steps of complex processes occurring in solution, such as the oxidation of sulphur dioxide. [ABSTRACT FROM AUTHOR]- Published
- 2021
- Full Text
- View/download PDF
9. Roles of the 2-Oxoglutarate-Dependent Dioxygenase Superfamily in the Flavonoid Pathway: A Review of the Functional Diversity of F3H, FNS I, FLS, and LDOX/ANS.
- Author
-
Wang, Yueyue, Shi, Yufeng, Li, Kaiyuan, Yang, Dong, Liu, Nana, Zhang, Lingjie, Zhao, Lei, Zhang, Xinfu, Liu, Yajun, Gao, Liping, Xia, Tao, and Wang, Peiqiang
- Subjects
PLANT adaptation ,PLANT metabolism ,CYANIDIN ,FLAVONES ,PROANTHOCYANIDINS ,PLANT proteins ,FLAVONOIDS - Abstract
The 2-oxoglutarate-dependent dioxygenase (2-OGD) superfamily is one of the largest protein families in plants. The main oxidation reactions they catalyze in plants are hydroxylation, desaturation, demethylation, epimerization, and halogenation. Four members of the 2-OGD superfamily, i.e., flavonone 3β-hydroxylase (F3H), flavones synthase I (FNS I), flavonol synthase (FLS), and anthocyanidin synthase (ANS)/leucoanthocyanidin dioxygenase (LDOX), are present in the flavonoid pathway, catalyzing hydroxylation and desaturation reactions. In this review, we summarize the recent research progress on these proteins, from the discovery of their enzymatic activity, to their functional verification, to the analysis of the response they mediate in plants towards adversity. Substrate diversity analysis indicated that F3H, FNS Ⅰ, ANS/LDOX, and FLS perform their respective dominant functions in the flavonoid pathway, despite the presence of functional redundancy among them. The phylogenetic tree classified two types of FNS Ⅰ, one mainly performing FNS activity, and the other, a new type of FNS present in angiosperms, mainly involved in C-5 hydroxylation of SA. Additionally, a new class of LDOXs is highlighted, which can catalyze the conversion of (+)-catechin to cyanidin, further influencing the starter and extension unit composition of proanthocyanidins (PAs). The systematical description of the functional diversity and evolutionary relationship among these enzymes can facilitate the understanding of their impacts on plant metabolism. On the other hand, it provides molecular genetic evidence of the chemical evolution of flavonoids from lower to higher plants, promoting plant adaptation to harsh environments. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
10. Functionalized Hydroperoxide Formation from the Reaction of Methacrolein-Oxide, an Isoprene-Derived Criegee Intermediate, with Formic Acid: Experiment and Theory.
- Author
-
Vansco, Michael F., Zuraski, Kristen, Winiberg, Frank A. F., Au, Kendrew, Trongsiriwat, Nisalak, Walsh, Patrick J., Osborn, David L., Percival, Carl J., Klippenstein, Stephen J., Taatjes, Craig A., Lester, Marsha I., Caravan, Rebecca L., and Meloni, Giovanni
- Subjects
PHOTOIONIZATION ,METHYL vinyl ketone ,FORMIC acid ,DAUGHTER ions ,MASS spectrometry ,ELECTRONIC structure ,OZONOLYSIS - Abstract
Methacrolein oxide (MACR-oxide) is a four-carbon, resonance-stabilized Criegee intermediate produced from isoprene ozonolysis, yet its reactivity is not well understood. This study identifies the functionalized hydroperoxide species, 1-hydroperoxy-2-methylallyl formate (HPMAF), generated from the reaction of MACR-oxide with formic acid using multiplexed photoionization mass spectrometry (MPIMS, 298 K = 25 °C, 10 torr = 13.3 hPa). Electronic structure calculations indicate the reaction proceeds via an energetically favorable 1,4-addition mechanism. The formation of HPMAF is observed by the rapid appearance of a fragment ion at m/z 99, consistent with the proposed mechanism and characteristic loss of HO
2 upon photoionization of functional hydroperoxides. The identification of HPMAF is confirmed by comparison of the appearance energy of the fragment ion with theoretical predictions of its photoionization threshold. The results are compared to analogous studies on the reaction of formic acid with methyl vinyl ketone oxide (MVK-oxide), the other four-carbon Criegee intermediate in isoprene ozonolysis. [ABSTRACT FROM AUTHOR]- Published
- 2021
- Full Text
- View/download PDF
11. Spectroelectrochemical Properties and Catalytic Activity in Cyclohexane Oxidation of the Hybrid Zr/Hf-Phthalocyaninate-Capped Nickel(II) and Iron(II) tris-Pyridineoximates and Their Precursors.
- Author
-
Voloshin, Yan Z., Dudkin, Semyon V., Belova, Svetlana A., Gherca, Daniel, Samohvalov, Dumitru, Manta, Corina-Mihaela, Lungan, Maria-Andreea, Meier-Menches, Samuel M., Rapta, Peter, Darvasiová, Denisa, Malček, Michal, Pombeiro, Armando J. L., Martins, Luísa M. D. R. S., Arion, Vladimir B., and Gerasimchuk, Nikolay
- Subjects
- *
ELECTRON paramagnetic resonance spectroscopy , *TRANSITION metals , *CATALYTIC activity , *IRON , *ELECTRON paramagnetic resonance , *CYCLOHEXANE - Abstract
The in situ spectroelectrochemical cyclic voltammetric studies of the antimony-monocapped nickel(II) and iron(II) tris-pyridineoximates with a labile triethylantimony cross-linking group and Zr(IV)/Hf(IV) phthalocyaninate complexes were performed in order to understand the nature of the redox events in the molecules of heterodinuclear zirconium(IV) and hafnium(IV) phthalocyaninate-capped derivatives. Electronic structures of their 1e-oxidized and 1e-electron-reduced forms were experimentally studied by electron paramagnetic resonance (EPR) spectroscopy and UV−vis−near-IR spectroelectrochemical experiments and supported by density functional theory (DFT) calculations. The investigated hybrid molecular systems that combine a transition metal (pseudo)clathrochelate and a Zr/Hf-phthalocyaninate moiety exhibit quite rich redox activity both in the cathodic and in the anodic region. These binuclear compounds and their precursors were tested as potential catalysts in oxidation reactions of cyclohexane and the results are discussed. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
12. New Copper(II) Coordination Compounds Assembled from Multifunctional Pyridine-Carboxylate Blocks: Synthesis, Structures, and Catalytic Activity in Cycloalkane Oxidation.
- Author
-
Zhao, Na, Li, Yu, Gu, Jinzhong, Fernandes, Tiago A., Kirillova, Marina V., Kirillov, Alexander M., Silva, Luís Cunha, and Almeida Paz, Filipe Alexandre
- Subjects
COORDINATION compounds ,COORDINATION polymers ,COPPER chlorides ,THERMOGRAVIMETRY ,STEREOSELECTIVE reactions ,CYCLOALKANES ,COPPER compounds - Abstract
Two new copper(II) coordination compounds, namely a 1D coordination polymer [Cu(µ-cpna)(phen)(H
2 O)]n (1) and a discrete tetracopper(II) derivative [Cu(phen)2 (H2 O)]2 [Cu2 (µ-Hdppa)2 (Hdppa)2 ] (2), were hydrothermally synthesized from copper(II) chloride as a metal source, 5-(4-carboxyphenoxy)nicotinic acid (H2 cpna) or 5-(3,4-dicarboxylphenyl)picolinic acid (H3 dppa) as a principal building block, and 1,10-phenanthroline (phen) as a crystallization mediator. Compounds 1 and 2 were isolated as air-stable microcrystalline solids and fully characterized by elemental and thermogravimetric analyses, IR spectroscopy, powder and single-crystal X-ray diffraction. In the solid state, the structure of 1 discloses the linear interdigitated 1D coordination polymer chains with the 2C1 topology. The crystal structure of an ionic derivative 2 shows that the mono- and dicopper(II) units are extended into the intricate 1D hydrogen-bonded chains with the SP 1-periodic net (4,4)(0,2) topology. Thermal stability and catalytic properties of 1 and 2 were also investigated. In fact, both Cu derivatives act as efficient homogeneous catalysts (catalyst precursors) for the mild oxidation of cycloalkanes by hydrogen peroxide to give the corresponding alcohols and ketones; the substrate scope and the effects of type and amount of acid promoter as well as bond-, regio-, and stereo-selectivity features were investigated. [ABSTRACT FROM AUTHOR]- Published
- 2019
- Full Text
- View/download PDF
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