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The crystal structure of allanite from granitic pegmatite, the Daibosatsu Pass, Yamanashi, Japan, has been refined under the constraint of chemical composition determined by electron microprobe analysis of rare earth elements. Back-scattered-electron images and X-ray element maps of the allanites show that each of their crystal grains has chemically homogeneous distribution of major elements. A typical formula for the chemistry is: (Ca0.920☐0.080)Σ1.000(La0.238Ce0.443Pr0.048Nd0.100Sm0.019Th0.042Mn0.008☐0.102)Σ1.000(Al0.607Fe0.3173+Ti0.076)Σ1.000(Al1.000)(Fe0.5432+Fe0.3653+Mn0.055Mg0.037)Σ1.000(SiO4)(Si2O7)O(OH).The crystal structure of allanite, monoclinic, a 8.905 (1), b 5.7606 (5), c 10.123 (1) Å, β 114.78°(1), space group P21/m, Z = 2, has been refined to an unweighted R factor of 3.46% for 1459 observed reflections. Although the H atom position was not determined on the Difference-Fourier map, inspection of the bond valence sums demonstrates that the H atom is uniquely located at the O10 atom and involved in a hydrogen bond to O4. A systematic examination as to crystal chemistry of allanites suggests that the isolated SiO4 tetrahedron has the largest distortion of three kinds of the tetrahedron containing Si2O7 groups in the allanite structure. This observation is common to the epidote group minerals, while the larger distortion of A2 sites caused by occupancy by REE in allanites contrasts with the smaller one of A sites in other epidote group minerals. In the allanite groups the bond angles between the O10–H bond and hydrogen bond H···O4 are found to range from 170 to 180°.Compilation of the chemical compositions of the title allanite and the others from granitic rocks, Japan, which reveals Th-incorporation as the coupled substitution of 3Th4+ + ☐ (vacancy) ⇌ 4REE3+, provides an explanation for the observation that higher Th concentrations characterize allanites from the island arcs. The ternary Al2O3-Fe2O3-ΣREE diagram illustrates that allanites are grouped, according to their origins, into three classes suggestive of tectonic backgrounds for the crystallization localities; (1) intracontinental, (2) island arc and (3) continental margin.

Thallium leucite, TlAlSi2O6, has been synthesized at 450°C for 7 days, under ambient conditions, by the transformation of dehydrated analcime NaAlSi2O6 in the presence of excess TlCl. This substitution of Tl for Na leads to confirmation of a thallium-leucite pseudomorph after analcime. Their optical properties, X-ray powder diffraction patterns, electron microprobe analysis, infrared spectra, and X-ray photoelectron spectroscopy have characterized the synthetic Tl-leucites. The IR spectra show that the mid-IR modes T-O stretching and T-O-T bending vibrations for TlAlSi2O6 are more resemblant of those for analcime than for leucite, KAlSi2O6. This resemblance implies that Tl cation enters the W-site rather than the S-site in the analcime structure: Na (S) + H2O (W) ⇋ □ + K (leucite) ⇋ □ + Tl (Tl- leucite), where □ represents an S-site vacancy. The mechanism of this substitution is supported by the crystal chemical constraints: inasmuch as the S-site is smaller than the W-site, Tl+ cations being larger than Na+ plainly prefer the latter site to the former. One inference from the binding energy for Tl+ by XPS is that Tl+ occupies the extra-framework site in synthetic leucite pseudomorph, rather than the smaller tetrahedral site. The difference in Al/Si disordering between analcime and leucite and the nonstoichiometry due to the solid solution of the □Si3O6 component into the leucite structure may provide a fundamental insight into understanding why TlAlSi2O6 deviates from the trend defined by K-, Rb- and CsAlSi2O6 leucite series on the a-c parameter diagram, inasmuch as these three cations in the leucite structure occupy the W-sites. Finally, synthesis of TlAlSi2O6 leucite has an implication for the existence of other polymorphs due to different degrees of Al/Si disordering, except for high- and low-temperature leucites already known: natural leucites crystallized directly through igneous processes are different from those formed by substitution of K for Na in analcimes.

Thallium leucite, TlAlSi2O6, has been synthesized at 450°C for 7 days, under ambient conditions, by the transformation of dehydrated analcime NaAlSi2O6 in the presence of excess TlCl. This substitution of Tl for Na leads to confirmation of a thallium-leucite pseudomorph after analcime. Their optical properties, X-ray powder diffraction patterns, electron microprobe analysis, infrared spectra, and X-ray photoelectron spectroscopy have characterized the synthetic Tl-leucites. The IR spectra show that the mid-IR modes T-O stretching and T-O-T bending vibrations for TlAlSi2O6 are more resemblant of those for analcime than for leucite, KAlSi2O6. This resemblance implies that Tl cation enters the W-site rather than the S-site in the analcime structure: Na (S) + H2O (W) ⇋ □ + K (leucite) ⇋ □ + Tl (Tl- leucite), where □ represents an S-site vacancy. The mechanism of this substitution is supported by the crystal chemical constraints: inasmuch as the S-site is smaller than the W-site, Tl+ cations being larger than Na+ plainly prefer the latter site to the former. One inference from the binding energy for Tl+ by XPS is that Tl+ occupies the extra-framework site in synthetic leucite pseudomorph, rather than the smaller tetrahedral site. The difference in Al/Si disordering between analcime and leucite and the nonstoichiometry due to the solid solution of the □Si3O6 component into the leucite structure may provide a fundamental insight into understanding why TlAlSi2O6 deviates from the trend defined by K-, Rb- and CsAlSi2O6 leucite series on the a-c parameter diagram, inasmuch as these three cations in the leucite structure occupy the W-sites. Finally, synthesis of TlAlSi2O6 leucite has an implication for the existence of other polymorphs due to different degrees of Al/Si disordering, except for high- and low-temperature leucites already known: natural leucites crystallized directly through igneous processes are different from those formed by substitution of K for Na in analcimes.

Anorthite megacrysts are common in basalts from the Japanese Island Arc, and signally rare in other global fields. These anorthites are 1 to 3 cm in size and often contain several corroded Mg-olivine inclusions. The megacrysts generally range from An94Ab4Ot2 to An89Ab6Ot5 (Ot: other minor end-members, including CaFeSi3O8, CaMgSi3O8, AlAl3SiO8, □Si4O8) and show no chemical zoning. They often show parting. Redclouded megacrysts contain microcrystals of native copper with a distribution reminiscent of the shape of a planetary nebula. Hydrocarbons are also present, both in the anorthite megacrysts and in the olivines included within them. Implications of lateral variations in the Fe/Mg ratio of the included olivines, in Sr-content and in Sr-isotope ratio of the anorthite megacrysts with respect to the Japanese island arc, relate to mixing of crustal components and subducted slab-sediments into the basaltic magmas.