1. Molecular epidemiology of Mycobacterium tuberculosis in Brazil before the whole genome sequencing era: a literature review
- Author
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Emilyn Costa Conceição, Richard Steiner Salvato, Karen Machado Gomes, Arthur Emil dos Santos Guimarães, Marília Lima da Conceição, Ricardo José de Paula Souza e Guimarães, Abhinav Sharma, Ismari Perini Furlaneto, Regina Bones Barcellos, Valdes Roberto Bollela, Lívia Maria Pala Anselmo, Maria Carolina Sisco, Cristina Viana Niero, Lucilaine Ferrazoli, Guislaine Refrégier, Maria Cristina da Silva Lourenço, Harrison Magdinier Gomes, Artemir Coelho de Brito, Marcos Catanho, Rafael Silva Duarte, Philip Noel Suffys, and Karla Valéria Batista Lima
- Subjects
tuberculosis ,Mycobacterium tuberculosis ,genotyping ,MIRU-VNTR typing ,RFLP-IS6110 ,Brazil ,Microbiology ,QR1-502 ,Infectious and parasitic diseases ,RC109-216 - Abstract
Molecular-typing can help in unraveling epidemiological scenarios and improvement for disease control strategies. A literature review of Mycobacterium tuberculosis transmission in Brazil through genotyping on 56 studies published from 1996-2019 was performed. The clustering rate for mycobacterial interspersed repetitive units - variable tandem repeats (MIRU-VNTR) of 1,613 isolates were: 73%, 33% and 28% based on 12, 15 and 24-loci, respectively; while for RFLP-IS6110 were: 84% among prison population in Rio de Janeiro, 69% among multidrug-resistant isolates in Rio Grande do Sul, and 56.2% in general population in São Paulo. These findings could improve tuberculosis (TB) surveillance and set up a solid basis to build a database of Mycobacterium genomes.
- Published
- 2021
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