Search

Chicken alpha1(V) collagen cDNAs have been cloned by a variety of methods and positively identified. We present here the entire translated sequence of the chick polypeptide and compare selected regions to other collagen chains in the type V/XI family.

The fibril-associated-collagens-with-interrupted-triple-helices (FACITs) are devoid of large C-propeptides like those involved in the trimeric assembly of the fibrillar collagens. Under these conditions, the C-terminal non triple-helical domain (NC1) and the adjacent triple-helical domain (COL1) are likely to be responsible for the trimeric assembly of these collagen molecules. Using a recombinant minigene of one of the FACITs, collagen XII, we show that a deletion covering most of the NC1 domain, except the first seven residues containing a cysteine and constituting the main part of the conserved junction between the COL1 and NC1 domains, does not prevent the formation of trimeric disulfide-bonded assembly of truncated α chains. These results suggest that if the non triple-helical NC1 domain is involved in the initial events governing the trimeric assembly, it must be through its amino acid residues participating in the junction. Our data confirm also the results obtained in a previous paper (Mazzorana et al.: J. Biol. Chem. 268: 3029–3032, 1993) showing that the formation of disulfide bonds is dependent on hydroxylation and suggesting that the folding of the triple helix (or a part of it) precedes the formation of the disulfide bonds.

The secondary structure of a conserved non-collagenous module in alpha 1(V), alpha 1(XI), alpha 1(IX), alpha 1(XII), alpha 1(XIV) and alpha 1(XVI) collagen chains and in proline- and arginine-rich protein was analyzed using different algorithms. The results predict that a common anti-parallel beta-sheet structure composed of nine consensus beta-strands is present in these non-collagenous modules. A model for the packing of these beta-sheets is proposed which suggests that the predicted beta-sheet structure may be involved in molecular recognition functions.