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In this study, we successfully estimated the apparent activation energy of a microbially driven oxygen-consuming reaction (microbial-driven) based on tracer data. The concept of the apparent chemical reaction rate constant was employed to estimate various thermodynamic parameters associated with the oxygen consumption rate in conjunction with Arrhenius/Eyring equations. Normal Ea values of 80–90 kJ mol−1 were found in the upper layers of the South China Sea and Sulu Sea, while higher Ea values (300–1000 kJ mol−1) were observed in the rapidly ventilated Mediterranean Sea, the Sea of Japan, and the Bering Sea with lower temperatures. We classified the characteristics of typical sea basins into four categories. The temperature-dependent oxygen consumption rate relationship in each marine region was systematically calculated to derive the respective thermodynamic characteristic values. This allowed us to parameterize the rate-temperature relationship into thermodynamic quantities, enabling more effective integration of distinct basin characteristics within different sea areas into the marine biochemical model. Parameterization facilitates relatively accurate prediction of changes such as temperature, oxygen consumption rate. • Temperature plays a significant role in regulating biochemical reactions. • The concept of the apparent chemical reaction rate constant was employe in conjunction with Arrhenius/Eyring equations. • The respective thermodynamic characteristic values were calculated for the selected basins. • The characteristics of typical sea basins can be classified into four categories. [ABSTRACT FROM AUTHOR]