34 results on '"Jun HAN"'
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2. Identification of an Intramolecular Switch That Controls the Interaction of Helicase nsp10 with Membrane-Associated nsp12 of Porcine Reproductive and Respiratory Syndrome Virus
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Xinna Ge, Hanchun Yang, Jun Han, Purui Ke, Xin Guo, Lei Zhou, Yunhao Hu, Yongning Zhang, and Peng Gao
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Protein Conformation ,Swine ,viruses ,Immunology ,Porcine Reproductive and Respiratory Syndrome ,RNA-dependent RNA polymerase ,Mutagenesis (molecular biology technique) ,Viral Nonstructural Proteins ,Biology ,Virus Replication ,Microbiology ,Transcription (biology) ,Virology ,Animals ,Porcine respiratory and reproductive syndrome virus ,Protein Interaction Maps ,Subgenomic mRNA ,Structure and Assembly ,RNA ,Helicase ,Reverse genetics ,Cell biology ,Amino Acid Substitution ,Membrane protein ,Insect Science ,Host-Pathogen Interactions ,Mutation ,biology.protein ,RNA, Viral - Abstract
A critical step in replication of positive-stranded RNA viruses is the assembly of replication and transcription complexes (RTC). We have recently mapped the nonstructural protein (nsp) interaction network of porcine reproductive and respiratory syndrome virus (PRRSV) and provided evidence by truncation mutagenesis that the recruitment of viral core replicase enzymes (nsp9 and nsp10) to membrane proteins (nsp2, nsp3, nsp5, and nsp12) is subject to regulation. Here, we went further to discover an intramolecular switch within the helicase nsp10 that controls its interaction with the membrane-associated protein nsp12. Deletion of nsp10 linker region amino acids 124 to 133, connecting domain 1B to 1A, led to complete relocalization and colocalization in the cells coexpressing nsp12. Moreover, single-amino-acid substitutions (e.g., nsp10 E131A and I132A) were sufficient to enable the nsp10-nsp12 interaction. Further proof came from membrane floatation assays that revealed a clear movement of nsp10 mutants, but not wild-type nsp10, toward the top of sucrose gradients in the presence of nsp12. Interestingly, the same mutations were not able to activate the nsp10-nsp2/3 interaction, suggesting a differential requirement for conformation. Reverse genetics analysis showed that PRRSV mutants carrying the single substitutions were not viable and were defective in subgenomic RNA (sgRNA) accumulation. Together, our results provide strong evidence for a regulated interaction between nsp10 and nsp12 and suggest an essential role for an orchestrated RTC assembly in sgRNA synthesis. IMPORTANCE Assembly of replication and transcription complexes (RTC) is a limiting step for viral RNA synthesis. The PRRSV RTC macromolecular complexes are comprised of mainly viral nonstructural replicase proteins (nsps), but how they come together remains elusive. We previously showed that viral helicase nsp10 interacts nsp12 in a regulated manner by truncation mutagenesis. Here, we revealed that the interaction is controlled by single residues within the domain linker region of nsp10. Moreover, the activation mutations lead to defects in viral sgRNA synthesis. Our results provide important insight into the mechanisms of PRRSV RTC assembly and regulation of viral sgRNA synthesis.
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- 2021
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3. Induction of Rod-Shaped Structures by Herpes Simplex Virus Glycoprotein I
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Peng Gao, Jun Han, Hanchun Yang, Xin Guo, Wuchao Zhang, Xinna Ge, Xixi Gui, Lei Zhou, and John W. Wills
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Viral pathogenesis ,Immunology ,Mutant ,Cell Communication ,Herpesvirus 1, Human ,Biology ,Virus Replication ,medicine.disease_cause ,Microbiology ,Cell Line ,Cell Fusion ,Virology ,Chlorocebus aethiops ,parasitic diseases ,medicine ,Animals ,Simplexvirus ,Vero Cells ,Glycoproteins ,chemistry.chemical_classification ,Cell fusion ,Membrane tubulation ,Structure and Assembly ,Antibodies, Monoclonal ,Cell biology ,Transmembrane domain ,Herpes simplex virus ,Viral replication ,chemistry ,Insect Science ,Mutation ,population characteristics ,Glycoprotein ,human activities - Abstract
The envelope glycoprotein I (gI) of herpes simplex virus 1 (HSV-1) is a critical mediator of virus-induced cell-to-cell spread and cell-cell fusion. Here, we report a previously unrecognized property of this molecule. In transfected cells, the HSV-1 gI was discovered to induce rod-shaped structures that were uniform in width but variable in length. Moreover, the gI within these structures was conformationally different from the typical form of gI, as a previously used monoclonal antibody mAb3104 and a newly made peptide antibody to the gI extracellular domain (ECD) (amino acids [aa] 110 to 202) both failed to stain the long rod-shaped structures, suggesting the formation of a higher-order form. Consistent with this observation, we found that gI could self-interact and that the rod-shaped structures failed to recognize glycoprotein E, the well-known binding partner of gI. Further analyses by deletion mutagenesis and construction of chimeric mutants between gI and gD revealed that the gI ECD is the critical determinant, whereas the transmembrane domain served merely as an anchor. The critical amino acids were subsequently mapped to proline residues 184 and 188 within a conserved PXXXP motif. Reverse genetics analyses showed that the ability to induce a rod-shaped structure was not required for viral replication and spread in cell culture but rather correlated positively with the capability of the virus to induce cell fusion in the UL24syn background. Together, this work discovered a novel feature of HSV-1 gI that may have important implications in understanding gI function in viral spread and pathogenesis. IMPORTANCE The HSV-1 gI is required for viral cell-to-cell spread within the host, but the molecular mechanisms of how gI exactly works have remained poorly understood. Here, we report a novel property of this molecule, namely, induction of rod-shaped structures, which appeared to represent a higher-order form of gI. We further mapped the critical residues and showed that the ability of gI to induce rod-shaped structures correlated well with the capability of HSV-1 to induce cell fusion in the UL24syn background, suggesting that the two events may have an intrinsic link. Our results shed light on the biological properties of HSV-1 gI and may have important implications in understanding viral pathogenesis.
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- 2020
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4. The nsp2 Hypervariable Region of Porcine Reproductive and Respiratory Syndrome Virus Strain JXwn06 Is Associated with Viral Cellular Tropism to Primary Porcine Alveolar Macrophages
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Hanchun Yang, Lei Zhou, Jiangwei Song, Xinna Ge, Xin Guo, Jun Han, Peng Gao, and Can Kong
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Swine ,animal diseases ,viruses ,Immunology ,Porcine Reproductive and Respiratory Syndrome ,Virus Attachment ,RNA-dependent RNA polymerase ,Biology ,Virus Replication ,Microbiology ,Cell Line ,Evolution, Molecular ,Viral Proteins ,03 medical and health sciences ,Protein Domains ,Viral life cycle ,Sequence Analysis, Protein ,Virology ,Macrophages, Alveolar ,Animals ,Porcine respiratory and reproductive syndrome virus ,Tropism ,Sequence Deletion ,030304 developmental biology ,Subgenomic mRNA ,0303 health sciences ,030306 microbiology ,virus diseases ,Porcine reproductive and respiratory syndrome virus ,biology.organism_classification ,Virus-Cell Interactions ,Hypervariable region ,Cysteine Endopeptidases ,Viral Tropism ,Insect Science ,Tissue tropism ,Cellular Tropism - Abstract
Porcine reproductive and respiratory syndrome virus (PRRSV) poses a major threat to global pork production and has been notorious for its rapid genetic evolution in the field. The nonstructural protein 2 (nsp2) replicase protein represents the fastest evolving region of PRRSV, but the underlying biological significance has remained poorly understood. By deletion mutagenesis, we discovered that the nsp2 hypervariable region plays an important role in controlling the balance of genomic mRNA and a subset of subgenomic mRNAs. More significantly, we revealed an unexpected link of the nsp2 hypervariable region to viral tropism. Specifically, a mutant of the Chinese highly pathogenic PRRSV strain JXwn06 carrying a deletion spanning nsp2 amino acids 323 to 521 (nsp2Δ323–521) in its hypervariable region was found to lose infectivity in primary porcine alveolar macrophages (PAMs), although it could replicate relatively efficiently in the supporting cell line MARC-145. Consequently, this mutant failed to establish an infection in piglets. Further dissection of the viral life cycle revealed that the mutant had a defect (or defects) lying in the steps between virus penetration and negative-stranded RNA synthesis. Taken together, our results reveal novel functions of nsp2 in the PRRSV life cycle and provide important insights into the mechanisms of PRRSV RNA synthesis and cellular tropism. IMPORTANCE The PRRSV nsp2 replicase protein undergoes rapid and broad genetic variations in its middle region in the field, but the underlying significance has remained enigmatic. Here, we demonstrate that the nsp2 hypervariable region not only plays an important regulatory role in maintaining the balance of different viral mRNA species but also regulates PRRSV tropism to primary PAMs. Our results reveal novel functions for PRRSV nsp2 and have important implications for understanding the mechanisms of PRRSV RNA synthesis and cellular tropism.
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- 2019
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5. Mapping the Nonstructural Protein Interaction Network of Porcine Reproductive and Respiratory Syndrome Virus
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Jiangwei Song, Peng Gao, Yuanyuan Liu, Hanchun Yang, Xin Guo, Lei Zhou, Can Kong, Shaochuan Zhou, Jun Han, Yue Chai, Xinna Ge, and Yunhao Hu
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0301 basic medicine ,Swine ,viruses ,Immunology ,RNA-dependent RNA polymerase ,Biology ,Viral Nonstructural Proteins ,Virus Replication ,Microbiology ,03 medical and health sciences ,Transcription (biology) ,Virology ,Two-Hybrid System Techniques ,Animals ,Immunoprecipitation ,Gene Regulatory Networks ,Porcine respiratory and reproductive syndrome virus ,Protein Interaction Maps ,Structure and Assembly ,virus diseases ,RNA virus ,Viral membrane ,biology.organism_classification ,Porcine reproductive and respiratory syndrome virus ,Transmembrane protein ,Cell biology ,030104 developmental biology ,Viral replication ,Membrane protein ,Insect Science - Abstract
Porcine reproductive and respiratory syndrome virus (PRRSV) is a positive-stranded RNA virus belonging to the family Arteriviridae. Synthesis of the viral RNA is directed by replication/transcription complexes (RTC) that are mainly composed of a network of PRRSV nonstructural proteins (nsps) and likely cellular proteins. Here, we mapped the interaction network among PRRSV nsps by using yeast two-hybrid screening in conjunction with coimmunoprecipitation (co-IP) and cotransfection assays. We identified a total of 24 novel interactions and found that the interactions were centered on open reading frame 1b (ORF1b)-encoded nsps that were mainly connected by the transmembrane proteins nsp2, nsp3, and nsp5. Interestingly, the interactions of the core enzymes nsp9 and nsp10 with transmembrane proteins did not occur in a straightforward manner, as they worked in the co-IP assay but were poorly capable of finding each other within intact mammalian cells. Further proof that they can interact within cells required the engineering of N-terminal truncations of both nsp9 and nsp10. However, despite the poor colocalization relationship in cotransfected cells, both nsp9 and nsp10 came together with membrane proteins (e.g., nsp2) at the viral replication and transcription complexes (RTC) in PRRSV-infected cells. Thus, our results indicate the existence of a complex interaction network among PRRSV nsps and raise the possibility that the recruitment of key replicase proteins to membrane-associated nsps may involve some regulatory mechanisms during infection. IMPORTANCE Synthesis of PRRSV RNAs within host cells depends on the efficient and correct assembly of RTC that takes places on modified intracellular membranes. As an important step toward dissecting this poorly understood event, we investigated the interaction network among PRRSV nsps. Our studies established a comprehensive interaction map for PRRSV nsps and revealed important players within the network. The results also highlight the likely existence of a regulated recruitment of the PRRSV core enzymes nsp9 and nsp10 to viral membrane nsps during PRRSV RTC assembly.
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- 2018
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6. The S Gene Is Necessary but Not Sufficient for the Virulence of Porcine Epidemic Diarrhea Virus Novel Variant Strain BJ2011C
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Xinna Ge, Xin Guo, Hanchun Yang, Dongjie Chen, Di Wang, Jie Li, Jin Deng, Lei Zhou, Jun Han, and Yueqi Cai
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0301 basic medicine ,Untranslated region ,Swine ,Immunology ,Mutant ,Virulence ,Microbiology ,Virus ,Feces ,03 medical and health sciences ,Virology ,Chlorocebus aethiops ,medicine ,Animals ,Vero Cells ,Gene ,Phylogeny ,Swine Diseases ,biology ,Porcine epidemic diarrhea virus ,biology.organism_classification ,Intestines ,Diarrhea ,030104 developmental biology ,Insect Science ,Spike Glycoprotein, Coronavirus ,Vero cell ,Pathogenesis and Immunity ,medicine.symptom ,Coronavirus Infections - Abstract
The recently emerged highly virulent variants of porcine epidemic diarrhea virus (PEDV) have caused colossal economic losses to the worldwide swine industry. In this study, we investigated the viral virulence determinants by constructing a series of chimeric mutants between the highly virulent strain BJ2011C and the avirulent strain CHM2013. When tested in the 2-day-old piglet model, wild-type (WT) BJ2011C caused severe diarrhea and death of the piglets within 72 h. In contrast, its chimeric derivative carrying the S gene from CHM2013 (BJ2011C-S CHM ) was avirulent to the piglets. Moreover, reciprocal substitution of the BJ2011C S gene (CHM2013-S BJ ) did not enable CHM2013 to gain any virulence. However, when the whole structural protein-coding region of BJ2011C (CHM2013-SP BJ ) was swapped, CHM2013 started to gain the ability to efficiently colonize the intestinal tract and caused diarrhea in piglets. A further gain of virulence required additional acquisition of the 3′ untranslated region (UTR) of BJ2011C, and the resultant virus (CHM2013-SP + 3UTR BJ ) caused more severe diarrhea and death of piglets. Together, our findings suggest that the virulence of PEDV epidemic strains is a multigenic event and that the S gene is only one of the necessary determinants. IMPORTANCE The recently emerged highly virulent PEDV variants are the major cause of the global porcine epidemic diarrhea (PED) pandemic. The S gene of the variants undergoes remarkable variations and has been thought to be the virulence determinant for the enhanced pathogenesis. Our studies here showed that the S gene is only part of the story and that full virulence requires cooperation from other genes. Our findings provide insight into the pathogenic mechanism of the highly virulent PEDV variants and have implications for future vaccine development.
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- 2018
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7. Targeting Swine Leukocyte Antigen Class I Molecules for Proteasomal Degradation by the nsp1α Replicase Protein of the Chinese Highly Pathogenic Porcine Reproductive and Respiratory Syndrome Virus Strain JXwn06
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Xin Guo, Lei Zhou, Jun Han, Hanchun Yang, Ping Jiang, Ying Liu, Xinna Ge, Zhe Wang, Jige Du, and Ruimin Zhang
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0301 basic medicine ,Cellular immunity ,Proteasome Endopeptidase Complex ,Swine ,viruses ,animal diseases ,030106 microbiology ,Immunology ,DNA Mutational Analysis ,Viral Nonstructural Proteins ,Microbiology ,Virus ,03 medical and health sciences ,Immunity ,Virology ,Cytotoxic T cell ,Animals ,Porcine respiratory and reproductive syndrome virus ,Pathogen ,Immune Evasion ,Innate immune system ,biology ,Macrophages ,Histocompatibility Antigens Class I ,Histocompatibility Antigens Class II ,Porcine reproductive and respiratory syndrome virus ,biology.organism_classification ,Virus-Cell Interactions ,CTL ,030104 developmental biology ,Insect Science ,Host-Pathogen Interactions ,Proteolysis - Abstract
Porcine reproductive and respiratory syndrome virus (PRRSV) is a critical pathogen of swine, and infections by this virus often result in delayed, low-level induction of cytotoxic T lymphocyte (CTL) responses in pigs. Here, we report that a Chinese highly pathogenic PRRSV strain possessed the ability to downregulate swine leukocyte antigen class I (SLA-I) molecules on the cell surface of porcine alveolar macrophages and target them for degradation in a manner that was dependent on the ubiquitin-proteasome system. Moreover, we found that the nsp1α replicase protein contributed to this property of PRRSV. Further mutagenesis analyses revealed that this function of nsp1α required the intact molecule, including the zinc finger domain, but not the cysteine protease activity. More importantly, we found that nsp1α was able to interact with both chains of SLA-I, a requirement that is commonly needed for many viral proteins to target their cellular substrates for proteasomal degradation. Together, our findings provide critical insights into the mechanisms of how PRRSV might evade cellular immunity and also add a new role for nsp1α in PRRSV infection. IMPORTANCE PRRSV infections often result in delayed, low-level induction of CTL responses in pigs. Deregulation of this immunity is thought to prevent the virus from clearance in an efficient and timely manner, contributing to persistent infections in swineherds. Our studies in this report provide critical insight into the mechanism of how PRRSV might evade CTL responses. In addition, our findings add a new role for nsp1α, a critical viral factor involved in antagonizing host innate immunity.
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- 2015
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8. Domain Interaction Studies of Herpes Simplex Virus 1 Tegument Protein UL16 Reveal Its Interaction with Mitochondria
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Jillian C. Carmichael, Akua Sarfo, Thomas Abraham, John W. Wills, Jun Han, Pooja Chadha, and Dan Zhang
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0301 basic medicine ,Immunoprecipitation ,viruses ,Immunology ,Population ,Herpesvirus 1, Human ,Plasma protein binding ,Biology ,medicine.disease_cause ,Mitochondrial Dynamics ,Myristic Acid ,Microbiology ,Cell Line ,Viral Proteins ,03 medical and health sciences ,Virology ,medicine ,Animals ,Humans ,Protein Interaction Domains and Motifs ,education ,Sequence Deletion ,education.field_of_study ,Binding Sites ,Structure and Assembly ,fungi ,Herpes Simplex ,Viral tegument ,Transfection ,Mitochondria ,Transport protein ,Cell biology ,Protein Transport ,030104 developmental biology ,Herpes simplex virus ,Amino Acid Substitution ,Viral replication ,Insect Science ,Protein Binding - Abstract
The UL16 tegument protein of herpes simplex virus 1 (HSV-1) is conserved among all herpesviruses and plays many roles during replication. This protein has an N-terminal domain (NTD) that has been shown to bind to several viral proteins, including UL11, VP22, and glycoprotein E, and these interactions are negatively regulated by a C-terminal domain (CTD). Thus, in pairwise transfections, UL16 binding is enabled only when the CTD is absent or altered. Based on these results, we hypothesized that direct interactions occur between the NTD and the CTD. Here we report that the separated and coexpressed functional domains of UL16 are mutually responsive to each other in transfected cells and form complexes that are stable enough to be captured in coimmunoprecipitation assays. Moreover, we found that the CTD can associate with itself. To our surprise, the CTD was also found to contain a novel and intrinsic ability to localize to specific spots on mitochondria in transfected cells. Subsequent analyses of HSV-infected cells by immunogold electron microscopy and live-cell confocal imaging revealed a population of UL16 that does not merely accumulate on mitochondria but in fact makes dynamic contacts with these organelles in a time-dependent manner. These findings suggest that the domain interactions of UL16 serve to regulate not just the interaction of this tegument protein with its viral binding partners but also its interactions with mitochondria. The purpose of this novel interaction remains to be determined. IMPORTANCE The HSV-1-encoded tegument protein UL16 is involved in multiple events of the virus replication cycle, ranging from virus assembly to cell-cell spread of the virus, and hence it can serve as an important drug target. Unfortunately, a lack of both structural and functional information limits our understanding of this protein. The discovery of domain interactions within UL16 and the novel ability of UL16 to interact with mitochondria in HSV-infected cells lays a foundational framework for future investigations aimed at deciphering the structure and function of not just UL16 of HSV-1 but also its homologs in other herpesviruses.
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- 2017
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9. Elucidation of the Block to Herpes Simplex Virus Egress in the Absence of Tegument Protein UL16 Reveals a Novel Interaction with VP22
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Jacob A. Marsh, Jason L. Starkey, Jun Han, Pooja Chadha, and John W. Wills
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viruses ,Immunology ,Mutant ,Plasma protein binding ,Biology ,medicine.disease_cause ,Microbiology ,Cell Line ,Viral Proteins ,Virology ,medicine ,Animals ,Humans ,Simplexvirus ,Vero Cells ,Viral Structural Proteins ,chemistry.chemical_classification ,Structure and Assembly ,Genetic Complementation Test ,Viral tegument ,biochemical phenomena, metabolism, and nutrition ,Molecular biology ,Cell biology ,Herpes simplex virus ,Capsid ,Membrane protein ,chemistry ,Cytoplasm ,Insect Science ,Glycoprotein ,Protein Binding - Abstract
UL16 is a tegument protein of herpes simplex virus (HSV) that is conserved among all members of the Herpesviridae , but its function is poorly understood. Previous studies revealed that UL16 is associated with capsids in the cytoplasm and interacts with the membrane protein UL11, which suggested a “bridging” function during cytoplasmic envelopment, but this conjecture has not been tested. To gain further insight, cells infected with UL16-null mutants were examined by electron microscopy. No defects in the transport of capsids to cytoplasmic membranes were observed, but the wrapping of capsids with membranes was delayed. Moreover, clusters of cytoplasmic capsids were often observed, but only near membranes, where they were wrapped to produce multiple capsids within a single envelope. Normal virion production was restored when UL16 was expressed either by complementing cells or from a novel position in the HSV genome. When the composition of the UL16-null viruses was analyzed, a reduction in the packaging of glycoprotein E (gE) was observed, which was not surprising, since it has been reported that UL16 interacts with this glycoprotein. However, levels of the tegument protein VP22 were also dramatically reduced in virions, even though this gE-binding protein has been shown not to depend on its membrane partner for packaging. Cotransfection experiments revealed that UL16 and VP22 can interact in the absence of other viral proteins. These results extend the UL16 interaction network beyond its previously identified binding partners to include VP22 and provide evidence that UL16 plays an important function at the membrane during virion production.
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- 2014
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10. Regulated Interaction of Tegument Proteins UL16 and UL11 from Herpes Simplex Virus
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Jason L. Starkey, Pooja Chadha, Jun Han, and John W. Wills
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Immunology ,Mutant ,Plasma protein binding ,Biology ,medicine.disease_cause ,Microbiology ,Herpesviridae ,Virology ,Chlorocebus aethiops ,Protein Interaction Mapping ,medicine ,Animals ,Simplexvirus ,Protein Interaction Domains and Motifs ,Binding site ,Vero Cells ,Sequence Deletion ,Viral Structural Proteins ,Budding ,Binding Sites ,Virus Assembly ,Structure and Assembly ,Viral tegument ,Molecular biology ,Cell biology ,Herpes simplex virus ,Amino Acid Substitution ,Capsid ,Insect Science ,Mutant Proteins ,Protein Binding - Abstract
It is well known that proteins in the tegument (located between the viral capsid and envelope proteins) play critical roles in the assembly and budding of herpesviruses. Tegument proteins UL16 and UL11 of herpes simplex virus (HSV) are conserved among all the Herpesviridae . Although these proteins directly interact in vitro , UL16 was found to colocalize poorly with UL11 in cotransfected cells. To explain this discrepancy, we hypothesized that UL16 is initially made in an inactive form and is artificially transformed to the binding-competent state when cells are disrupted. Consistent with a regulated interaction, UL16 was able to fully colocalize with UL11 when a large C-terminal segment of UL16 was removed, creating mutant UL16(1-155). Moreover, membrane flotation assays revealed a massive movement of this mutant to the top of sucrose gradients in the presence of UL11, whereas both the full-length UL16 and the C-terminal fragment (residues 156 to 373) remained at the bottom. Further evidence for the presence of a C-terminal regulatory domain was provided by single-amino-acid substitutions at conserved cysteines (C269S, C271S, and C357S), which enabled the efficient interaction of full-length UL16 with UL11. Lastly, the binding site for UL11 was further mapped to residues 81 to 155, and to our surprise, the 5 Cys residues within UL16(1-155) are not required, even though the modification of free cysteines in UL16 with N -ethylmaleimide does in fact prevent binding. Collectively, these results reveal a regulatory function within the C-terminal region of UL16 that controls an N-terminal UL11-binding activity.
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- 2012
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11. Replication of Herpes Simplex Virus: Egress of Progeny Virus at Specialized Cell Membrane Sites
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Jay C. Brown, Rebecca M. Mingo, William W. Newcomb, and Jun Han
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Endosome ,viruses ,Immunology ,Herpesvirus 1, Human ,Biology ,medicine.disease_cause ,Microbiology ,Cell membrane ,Viral Proteins ,Virology ,Chlorocebus aethiops ,medicine ,Animals ,Cytoskeleton ,Vero Cells ,Virus Release ,Glycoproteins ,Microscopy, Confocal ,Cell Membrane ,Viral nucleocapsid ,Actin cytoskeleton ,Virus-Cell Interactions ,Cell biology ,Microscopy, Electron ,Herpes simplex virus ,medicine.anatomical_structure ,Microscopy, Fluorescence ,Insect Science ,Host-Pathogen Interactions ,Vero cell - Abstract
In the final stages of the herpes simplex virus 1 (HSV-1) life cycle, a viral nucleocapsid buds into a vesicle of trans -Golgi network (TGN)/endosome origin, acquiring an envelope and an outer vesicular membrane. The virus-containing vesicle then traffics to the plasma membrane where it fuses, exposing a mature virion. Although the process of directed egress has been studied in polarized epithelial cell lines, less work has been done in nonpolarized cell types. In this report, we describe a study of HSV-1 egress as it occurs in nonpolarized cells. The examination of infected Vero cells by electron, confocal, and total internal reflection fluorescence (TIRF) microscopy revealed that HSV-1 was released at specific pocket-like areas of the plasma membrane that were found along the substrate-adherent surface and cell-cell-adherent contacts. Both the membrane composition and cytoskeletal structure of egress sites were found to be modified by infection. The plasma membrane at virion release sites was heavily enriched in viral glycoproteins. Small glycoprotein patches formed early in infection, and virus became associated with these areas as they expanded. Glycoprotein-rich areas formed independently from virion trafficking as confirmed by the use of a UL25 mutant with a defect in capsid nuclear egress. The depolymerization of the cytoskeleton indicated that microtubules were important for the trafficking of virions and glycoproteins to release sites. In addition, the actin cytoskeleton was found to be necessary for maintaining the integrity of egress sites. When actin was depolymerized, the glycoprotein concentrations dispersed across the membrane, as did the surface-associated virus. Lastly, viral glycoprotein E appeared to function in a different manner in nonpolarized cells compared to previous studies of egress in polarized epithelial cells; the total amount of virus released at egress sites was slightly increased in infected Vero cells when gE was absent. However, gE was important for egress site formation, as Vero cells infected with gE deletion mutants formed glycoprotein patches that were significantly reduced in size. The results of this study are interpreted to indicate that the egress of HSV-1 in Vero cells is directed to virally induced, specialized egress sites that form along specific areas of the cell membrane.
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- 2012
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12. Interaction and Interdependent Packaging of Tegument Protein UL11 and Glycoprotein E of Herpes Simplex Virus
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Nicholas L. Baird, Jun Han, John W. Wills, David G. Meckes, and Pooja Chadha
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Immunology ,Mutant ,Herpesvirus 1, Human ,Plasma protein binding ,Biology ,medicine.disease_cause ,Microbiology ,Viral Envelope Proteins ,Virology ,Chlorocebus aethiops ,Protein Interaction Mapping ,medicine ,Animals ,Binding site ,Vero Cells ,Viral Structural Proteins ,chemistry.chemical_classification ,Structure and Assembly ,Virus Assembly ,Viral tegument ,Molecular biology ,Cell biology ,Herpes simplex virus ,chemistry ,Cytoplasm ,Insect Science ,Trans-acting ,Glycoprotein ,Gene Deletion ,Protein Binding - Abstract
The UL11 tegument protein of herpes simplex virus plays a critical role in the secondary envelopment; however, the mechanistic details remain elusive. Here, we report a new function of UL11 in the budding process in which it directs efficient acquisition of glycoprotein E (gE) via a direct interaction. In vitro binding assays showed that the interaction required only the first 28, membrane-proximal residues of the cytoplasmic tail of gE, and the C-terminal 26 residues of UL11. A second, weaker binding site was also found in the N-terminal half of UL11. The significance of the gE-UL11 interaction was subsequently investigated with viral deletion mutants. In the absence of the gE tail, virion packaging of UL11, but not other tegument proteins such as VP22 and VP16, was reduced by at least 80%. Reciprocally, wild-type gE packaging was also drastically reduced by about 87% in the absence of UL11, and this defect could be rescued in trans by expressing U L 11 at the U L 35 locus. Surprisingly, a mutant that lacks the C-terminal gE-binding site of UL11 packaged nearly normal amounts of gE despite its strong interaction with the gE tail in vitro , indicating that the interaction with the UL11 N terminus may be important. Mutagenesis studies of the UL11 N terminus revealed that the association of UL11 with membrane was not required for this function. In contrast, the UL11 acidic cluster motif was found to be critical for gE packaging and was not replaceable with foreign acidic clusters. Together, these results highlight an important role of UL11 in the acquisition of glycoprotein-enriched lipid bilayers, and the findings may also have important implications for the role of UL11 in gE-mediated cell-to-cell spread.
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- 2011
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13. Proteolytic Products of the Porcine Reproductive and Respiratory Syndrome Virus nsp2 Replicase Protein
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Jun Han, Mark S. Rutherford, and Kay S. Faaberg
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Swine ,viruses ,Immunology ,RNA-dependent RNA polymerase ,CHO Cells ,Transfection ,Virus Replication ,Microbiology ,Virus ,Arterivirus ,Viral Proteins ,Cricetulus ,Cricetinae ,Virology ,Heat shock protein ,Enzyme Stability ,Animals ,Porcine respiratory and reproductive syndrome virus ,Sequence Deletion ,Base Sequence ,biology ,Chinese hamster ovary cell ,virus diseases ,biochemical phenomena, metabolism, and nutrition ,RNA-Dependent RNA Polymerase ,Porcine reproductive and respiratory syndrome virus ,biology.organism_classification ,Molecular biology ,Recombinant Proteins ,Genome Replication and Regulation of Viral Gene Expression ,Deletion Mutagenesis ,Isoenzymes ,Viral replication ,Insect Science ,DNA, Viral ,Protein Processing, Post-Translational ,Peptide Hydrolases - Abstract
The nsp2 replicase protein of porcine reproductive and respiratory syndrome virus (PRRSV) was recently demonstrated to be processed from its precursor by the PL2 protease at or near the G 1196 |G 1197 dipeptide in transfected CHO cells. Here the proteolytic cleavage of PRRSV nsp2 was further investigated in virally infected MARC-145 cells by using two recombinant PRRSVs expressing epitope-tagged nsp2. The data revealed that PRRSV nsp2 exists as different isoforms, termed nsp2a, nsp2b, nsp2c, nsp2d, nsp2e, and nsp2f, during PRRSV infection. Moreover, on the basis of deletion mutagenesis and antibody probing, these nsp2 species appeared to share the same N terminus but to differ in their C termini. The largest protein, nsp2a, corresponded to the nsp2 product identified in transfected CHO cells. nsp2b and nsp2c were processed within or near the transmembrane (TM) region, presumably at or near the conserved sites G 981 |G 982 and G 828 |G 829 |G 830 , respectively. The C termini for nsp2d, -e, and -f were mapped within the nsp2 middle hypervariable region, but no conserved cleavage sites could be definitively predicted. The larger nsp2 species emerged almost simultaneously in the early stage of PRRSV infection. Pulse-chase analysis revealed that all six nsp2 species were relatively stable and had low turnover rates. Deletion mutagenesis revealed that the smaller nsp2 species (e.g., nsp2d, nsp2e, and nsp2f) were not essential for viral replication in cell culture. Lastly, we identified a cellular chaperone, named heat shock 70-kDa protein 5 (HSPA5), that was strongly associated with nsp2, which may have important implications for PRRSV replication. Overall, these findings indicate that PRRSV nsp2 is increasingly emerging as a multifunctional protein and may have a profound impact on PRRSV replication and viral pathogenesis.
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- 2010
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14. The Polymerase Acidic Protein Gene of Influenza A Virus Contributes to Pathogenicity in a Mouse Model
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Min-Suk Song, Hyunggee Kim, Jun Han Lee, Philippe Noriel Q. Pascua, Ok Jun Lee, Richard J. Webby, Robert G. Webster, Chul Joong Kim, Yun Hee Baek, and Young Ki Choi
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Virulence Factors ,Immunology ,Orthomyxoviridae ,Adaptation, Biological ,Mutation, Missense ,Virulence ,Biology ,medicine.disease_cause ,Microbiology ,Virus ,Cell Line ,Birds ,Lethal Dose 50 ,Mice ,Viral Proteins ,Orthomyxoviridae Infections ,Serial passage ,Virology ,Influenza A virus ,medicine ,Animals ,Serial Passage ,Lung ,Gene ,Mice, Inbred BALB C ,Mutation ,Korea ,Bird Diseases ,RNA-Dependent RNA Polymerase ,biology.organism_classification ,Survival Analysis ,Influenza A virus subtype H5N1 ,Influenza in Birds ,Insect Science ,Pathogenesis and Immunity ,Genetic Engineering ,Influenza A Virus, H5N2 Subtype - Abstract
Adaptation of influenza A viruses to a new host species usually involves the mutation of one or more of the eight viral gene segments, and the molecular basis for host range restriction is still poorly understood. To investigate the molecular changes that occur during adaptation of a low-pathogenic avian influenza virus subtype commonly isolated from migratory birds to a mammalian host, we serially passaged the avirulent wild-bird H5N2 strain A/Aquatic bird/Korea/W81/05 (W81) in the lungs of mice. The resulting mouse-adapted strain (ma81) was highly virulent (50% mouse lethal dose = 2.6 log 10 50% tissue culture infective dose) and highly lethal. Nonconserved mutations were observed in six viral genes (those for PB2, PB1, PA, HA, NA, and M). Reverse genetic experiments substituting viral genes and mutations demonstrated that the PA gene was a determinant of the enhanced virulence in mice and that a Thr-to-Iso substitution at position 97 of PA played a key role. In growth kinetics studies, ma81 showed enhanced replication in mammalian but not avian cell lines; the PA 97I mutation in strain W81 increased its replicative fitness in mice but not in chickens. The high virulence associated with the PA 97I mutation in mice corresponded to considerably enhanced polymerase activity in mammalian cells. Furthermore, this characteristic mutation is not conserved among avian influenza viruses but is prevalent among mouse-adapted strains, indicating a host-dependent mutation. To our knowledge, this is the first study that the isoleucine residue at position 97 in PA plays a key role in enhanced virulence in mice and is implicated in the adaptation of avian influenza viruses to mammalian hosts.
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- 2009
- Full Text
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15. The Porcine Reproductive and Respiratory Syndrome Virus nsp2 Cysteine Protease Domain Possesses both trans- and cis-Cleavage Activities
- Author
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Mark S. Rutherford, Kay S. Faaberg, and Jun Han
- Subjects
medicine.medical_treatment ,viruses ,Immunology ,CHO Cells ,Biology ,Viral Nonstructural Proteins ,Microbiology ,Protein structure ,Cricetulus ,Virology ,Catalytic Domain ,Cricetinae ,medicine ,Animals ,Porcine respiratory and reproductive syndrome virus ,Amino Acid Sequence ,Cysteine ,Peptide sequence ,chemistry.chemical_classification ,Protease ,Point mutation ,Cysteine protease ,Molecular biology ,Amino acid ,Genome Replication and Regulation of Viral Gene Expression ,Protein Structure, Tertiary ,NS2-3 protease ,Cysteine Endopeptidases ,Biochemistry ,chemistry ,Insect Science - Abstract
The N terminus of the replicase nonstructural protein 2 (nsp2) of porcine reproductive and respiratory syndrome virus (PRRSV) contains a putative cysteine protease domain (PL2). Previously, we demonstrated that deletion of either the PL2 core domain (amino acids [aa] 47 to 180) or the immediate downstream region (aa 181 to 323) is lethal to the virus. In this study, the PL2 domain was found to encode an active enzyme that mediates efficient processing of nsp2-3 in CHO cells. The PL2 protease possessed both trans - and cis -cleavage activities, which were distinguished by individual point mutations in the protease domain. The minimal size required to maintain these two enzymatic activities included nsp2 aa 47 to 240 (Tyr 47 to Cys 240 ) and aa 47 to 323 (Tyr 47 to Leu 323 ), respectively. Introduction of targeted amino acid mutations in the protease domain confirmed the importance of the putative Cys 55 - His 124 catalytic motif for nsp2/3 proteolysis in vitro, as were three additional conserved cysteine residues (Cys 111 , Cys 142 , and Cys 147 ). The conserved aspartic acids (e.g., Asp 89 ) were essential for the PL2 protease trans -cleavage activity. Reverse genetics revealed that the PL2 trans -cleavage activity played an important role in the PRRSV replication cycle in that mutations that impaired the PL2 protease trans function, but not the cis activity, were detrimental to viral viability. Lastly, the potential nsp2/3 cleavage site was probed. Mutations with the largest impact on in vitro cleavage were at or near the G 1196 |G 1197 dipeptide.
- Published
- 2009
- Full Text
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16. Isolation and Genetic Characterization of H5N2 Influenza Viruses from Pigs in Korea
- Author
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Hwan-Woon Choi, Moon-Hee Sung, Young-Ki Choi, Philippe Noriel Q. Pascua, Yun Hee Baek, Min-Suk Song, Jun Han Lee, Chul-Joong Kim, Haryoung Poo, Richard J. Webby, and Robert G. Webster
- Subjects
Swine ,animal diseases ,viruses ,Orthomyxoviridae ,Immunology ,Sequence Homology ,Virulence ,Biology ,medicine.disease_cause ,H5N1 genetic structure ,Microbiology ,Virus ,Viral Proteins ,Orthomyxoviridae Infections ,Virology ,Pandemic ,Influenza A virus ,medicine ,Animals ,Amino Acid Sequence ,Antigens, Viral ,Phylogeny ,Swine Diseases ,Korea ,Ferrets ,biology.organism_classification ,Influenza A virus subtype H5N1 ,Genetic Diversity and Evolution ,Insect Science ,Viral disease ,Influenza A Virus, H5N2 Subtype - Abstract
Due to dual susceptibility to both human and avian influenza A viruses, pigs are believed to be effective intermediate hosts for the spread and production of new viruses with pandemic potential. In early 2008, two swine H5N2 viruses were isolated from our routine swine surveillance in Korea. The sequencing and phylogenetic analysis of surface proteins revealed that the Sw/Korea/C12/08 and Sw/Korea/C13/08 viruses were derived from avian influenza viruses of the Eurasian lineage. However, although the Sw/Korea/C12/08 isolate is an entirely avian-like virus, the Sw/Korea/C13/08 isolate is an avian-swine-like reassortant with the PB2, PA, NP, and M genes coming from a 2006 Korean swine H3N1-like virus. The molecular characterization of the two viruses indicated an absence of significant mutations that could be associated with virulence or binding affinity. However, animal experiments showed that the reassortant Sw/Korea/C13/08 virus was more adapted and was more readily transmitted than the purely avian-like virus in a swine experimental model but not in ferrets. Furthermore, seroprevalence in swine sera from 2006 to 2008 suggested that avian H5 viruses have been infecting swine since 2006. Although there are no known potential clinical implications of the avian-swine reassortant virus for pathogenicity in pigs or other species, including humans, at present, the efficient transmissibility of the swine-adapted H5N2 virus could facilitate virus spread and could be a potential model for pandemic, highly pathogenic avian influenza (e.g., H5N1 and H7N7) virus outbreaks or a pandemic strain itself.
- Published
- 2009
- Full Text
- View/download PDF
17. Direct and specific binding of the UL16 tegument protein of herpes simplex virus to the cytoplasmic tail of glycoprotein E
- Author
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Jun Han, Pei Chun Yeh, John W. Wills, O. John Semmes, David G. Meckes, Michael D. Ward, and Pooja Chadha
- Subjects
viruses ,Immunology ,Mutant ,Plasma protein binding ,Herpesvirus 1, Human ,Biology ,medicine.disease_cause ,Microbiology ,Cell Line ,chemistry.chemical_compound ,Viral Proteins ,Virology ,Protein Interaction Mapping ,medicine ,Animals ,Humans ,Structure and Assembly ,Viral tegument ,Heparan sulfate ,Molecular biology ,Herpes simplex virus ,chemistry ,Capsid ,Cytoplasm ,Insect Science ,Binding domain ,Protein Binding - Abstract
The UL16 tegument protein of herpes simplex virus (HSV) is conserved throughout all of the herpesvirus families. Previous studies have shown that the binding of HSV to heparan sulfate molecules on the host cell triggers the release of UL16 from the capsid, but the mechanism by which the signal is sent from the virion surface into the tegument is unknown. Here, we report that a glutathione S -transferase chimera bearing the cytoplasmic tail of viral glycoprotein E (gE) is capable of binding to UL16 in lysates of eukaryotic cells or purified from bacteria. Moreover, mass spectrometry studies of native-UL16 complexes purified from infected cells also revealed the presence of gE. Proof that UL16-gE can interact within cells required the fortuitous discovery of a mutant possessing only the first 155 residues of UL16. Confocal microscopy of cotransfected cells revealed that this mutant colocalized with gE in the cytoplasm, whereas it was found throughout the cytoplasm and nucleus when expressed alone. In contrast, the full-length UL16 molecule was very poorly capable of finding gE. Moreover, membrane flotation assays showed that UL16(1-155) was able to float to the top of sucrose step gradients when coexpressed with gE, whereas full-length UL16 was not. Thus, the discovery of the UL16(1-155) mutant confirmed the specific in vitro interaction with gE and provides evidence that a binding domain at the N terminus of UL16 may be controlled by a regulatory domain within the C terminus. These findings suggest the possibility that the UL16-gE interaction may play roles in the tegument signaling mechanism, virus budding, and the gE-mediated mechanism of cell-to-cell spread.
- Published
- 2011
18. Virulence and Genetic Compatibility of Polymerase Reassortant Viruses Derived from the Pandemic (H1N1) 2009 Influenza Virus and Circulating Influenza A Viruses
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Song, Min-Suk, primary, Pascua, Philippe Noriel Q., additional, Lee, Jun Han, additional, Baek, Yun Hee, additional, Park, Kuk Jin, additional, Kwon, Hyeok-il, additional, Park, Su-Jin, additional, Kim, Chul-Joong, additional, Kim, Hyunggee, additional, Webby, Richard J., additional, Webster, Robert G., additional, and Choi, Young Ki, additional
- Published
- 2011
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19. The Polymerase Acidic Protein Gene of Influenza A Virus Contributes to Pathogenicity in a Mouse Model
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Song, Min-Suk, primary, Pascua, Philippe Noriel Q., additional, Lee, Jun Han, additional, Baek, Yun Hee, additional, Lee, Ok-Jun, additional, Kim, Chul-Joong, additional, Kim, Hyunggee, additional, Webby, Richard J., additional, Webster, Robert G., additional, and Choi, Young Ki, additional
- Published
- 2009
- Full Text
- View/download PDF
20. Isolation and Genetic Characterization of H5N2 Influenza Viruses from Pigs in Korea
- Author
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Lee, Jun Han, primary, Pascua, Philippe Noriel Q., additional, Song, Min-Suk, additional, Baek, Yun Hee, additional, Kim, Chul-Joong, additional, Choi, Hwan-Woon, additional, Sung, Moon-Hee, additional, Webby, Richard J., additional, Webster, Robert G., additional, Poo, Haryoung, additional, and Choi, Young Ki, additional
- Published
- 2009
- Full Text
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21. Elucidation of the Block to Herpes Simplex Virus Egress in the Absence of Tegument Protein UL16 Reveals a Novel Interaction with VP22.
- Author
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Starkey, Jason L., Jun Han, Chadha, Pooja, Marsh, Jacob A., and Wills, John W.
- Subjects
- *
HERPES simplex virus , *PROTEIN analysis , *MEMBRANE proteins , *VIRION , *CAPSIDS - Abstract
UL16 is a tegument protein of herpes simplex virus (HSV) that is conserved among all members of the Herpesviridae, but its function is poorly understood. Previous studies revealed that UL16 is associated with capsids in the cytoplasm and interacts with the membrane protein UL11, which suggested a "bridging" function during cytoplasmic envelopment, but this conjecture has not been tested. To gain further insight, cells infected with UL16-null mutants were examined by electron microscopy. No defects in the transport of capsids to cytoplasmic membranes were observed, but the wrapping of capsids with membranes was delayed. Moreover, clusters of cytoplasmic capsids were often observed, but only near membranes, where they were wrapped to produce multiple capsids within a single envelope. Normal virion production was restored when UL16 was expressed either by complementing cells or from a novel position in the HSV genome. When the composition of the UL16-null viruses was analyzed, a reduction in the packaging of glycoprotein E (gE) was observed, which was not surprising, since it has been reported that UL16 interacts with this glycoprotein. However, levels of the tegument protein VP22 were also dramatically reduced in virions, even though this gE-binding protein has been shown not to depend on its membrane partner for packaging. Cotransfection experiments revealed that UL16 and VP22 can interact in the absence of other viral proteins. These results extend the UL16 interaction network beyond its previously identified binding partners to include VP22 and provide evidence that UL16 plays an important function at the membrane during virion production. [ABSTRACT FROM AUTHOR]
- Published
- 2014
- Full Text
- View/download PDF
22. Interaction and Interdependent Packaging of Tegument Protein UL11 and Glycoprotein E of Herpes Simplex Virus.
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Jun Han, Chadha, Pooja, Meckes, Jr., David G., Baird, Nicholas L., and Wills, John W.
- Subjects
- *
HERPES simplex virus , *GLYCOPROTEINS , *MUTAGENESIS , *BILAYER lipid membranes , *PACKAGING - Abstract
The UL11 tegument protein of herpes simplex virus plays a critical role in the secondary envelopment; however, the mechanistic details remain elusive. Here, we report a new function of UL11 in the budding process in which it directs efficient acquisition of glycoprotein E (gE) via a direct interaction. In vitro binding assays showed that the interaction required only the first 28, membrane-proximal residues of the cytoplasmic tail of gE, and the C-terminal 26 residues of UL11. A second, weaker binding site was also found in the N-terminal half of UL11. The significance of the gE-UL11 interaction was subsequently investigated with viral deletion mutants. In the absence of the gE tail, virion packaging of UL11, but not other tegument proteins such as VP22 and VP16, was reduced by at least 80%. Reciprocally, wild-type gE packaging was also drastically reduced by about 87% in the absence of UL11, and this defect could be rescued in trans by expressing UL11 at the UL35 locus. Surprisingly, a mutant that lacks the C-terminal gE-binding site of UL11 packaged nearly normal amounts of gE despite its strong interaction with the gE tail in vitro, indicating that the interaction with the UL11 N terminus may be important. Mutagenesis studies of the UL11 N terminus revealed that the association of UL11 with membrane was not required for this function. In contrast, the UL11 acidic cluster motif was found to be critical for gE packaging and was not replaceable with foreign acidic clusters. Together, these results highlight an important role of UL11 in the acquisition of glycoprotein-enriched lipid bilayers, and the findings may also have important implications for the role of UL11 in gE-mediated cell-to-cell spread. [ABSTRACT FROM AUTHOR]
- Published
- 2011
- Full Text
- View/download PDF
23. Direct and Specific Binding of the UL16 Tegument Protein of Herpes Simplex Virus to the Cytoplasmic Tail of Glycoprotein E.
- Author
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Pei-Chun Yeh, Jun Han, Chadha, Pooja, Meckes, Jr., David G., Ward, Michael D., Semmes, O. John, and Wills, John W.
- Subjects
- *
HERPES simplex , *HERPES simplex virus , *GLYCOPROTEINS , *EUKARYOTIC cells , *MICROSCOPY - Abstract
The UL16 tegument protein of herpes simplex virus (HSV) is conserved throughout all of the herpesvirus families. Previous studies have shown that the binding of HSV to heparan sulfate molecules on the host cell triggers the release of UL16 from the capsid, but the mechanism by which the signal is sent from the virion surface into the tegument is unknown. Here, we report that a glutathione S-transferase chimera bearing the cytoplasmic tail of viral glycoprotein E (gE) is capable of binding to UL16 in lysates of eukaryotic cells or purified from bacteria. Moreover, mass spectrometry studies of native-UL16 complexes purified from infected cells also revealed the presence of gE. Proof that UL16-gE can interact within cells required the fortuitous discovery of a mutant possessing only the first 155 residues of UL16. Confocal microscopy of cotransfected cells revealed that this mutant colocalized with gE in the cytoplasm, whereas it was found throughout the cytoplasm and nucleus when expressed alone. In contrast, the full-length UL16 molecule was very poorly capable of finding gE. Moreover, membrane flotation assays showed that UL16(1-155) was able to float to the top of sucrose step gradients when coexpressed with gE, whereas full-length UL16 was not. Thus, the discovery of the UL16(1-155) mutant confirmed the specific in vitro interaction with gE and provides evidence that a binding domain at the N terminus of UL16 may be controlled by a regulatory domain within the C terminus. These findings suggest the possibility that the UL16-gE interaction may play roles in the tegument signaling mechanism, virus budding, and the gE-mediated mechanism of cell-to-cell spread. [ABSTRACT FROM AUTHOR]
- Published
- 2011
- Full Text
- View/download PDF
24. The Porcine Reproductive and Respiratory Syndrome Virus nsp2 Cysteine Protease Domain Possesses both trans- and cis-Cleavage Activities.
- Author
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Jun Han, Rutherford, Mark S., and Faaberg, Kay S.
- Subjects
- *
PORCINE reproductive & respiratory syndrome , *CYSTEINE proteinases , *AMINO acids , *ENZYMES , *PROTEOLYTIC enzymes , *GENETIC mutation - Abstract
The N terminus of the replicase nonstructural protein 2 (nsp2) of porcine reproductive and respiratory syndrome virus (PRRSV) contains a putative cysteine protease domain (PL2). Previously, we demonstrated that deletion of either the PL2 core domain (amino acids [aa] 47 to 180) or the immediate downstream region (aa 181 to 323) is lethal to the virus. In this study, the PL2 domain was found to encode an active enzyme that mediates efficient processing of nsp2-3 in CHO cells. The PL2 protease possessed both trans- and cis-cleavage activities, which were distinguished by individual point mutations in the protease domain. The minimal size required to maintain these two enzymatic activities included nsp2 aa 47 to 240 (Tyr47 to Cys240) and aa 47 to 323 (Tyr47 to Leu323), respectively. Introduction of targeted amino acid mutations in the protease domain confirmed the importance of the putative Cys55- His124 catalytic motif for nsp2/3 proteolysis in vitro, as were three additional conserved cysteine residues (Cys111, Cys142, and Cys147). The conserved aspartic acids (e.g., Asp89) were essential for the PL2 protease trans-cleavage activity. Reverse genetics revealed that the PL2 trans-cleavage activity played an important role in the PRRSV replication cycle in that mutations that impaired the PL2 protease trans function, but not the cis activity, were detrimental to viral viability. Lastly, the potential nsp2/3 cleavage site was probed. Mutations with the largest impact on in vitro cleavage were at or near the G1196∣G1197 dipeptide. [ABSTRACT FROM AUTHOR]
- Published
- 2009
- Full Text
- View/download PDF
25. Isolation and Genetic Characterization of H5N2 Influenza Viruses from Pigs in Korea.
- Author
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Jun Han Lee, Pascua, Philippe Noriel Q., Min-Suk Song, Yun Hee Baek, Chul-Joong Kim, Hwan-Woon Choi, Moon-Hee Sung, Webby, Richard J., Webster, Robert G., Haryoung Poo, and Young Ki Choi
- Subjects
- *
INFLUENZA viruses , *SWINE diseases , *PHYLOGENY , *AVIAN influenza , *VIRUS diseases - Abstract
Due to dual susceptibility to both human and avian influenza A viruses, pigs are believed to be effective intermediate hosts for the spread and production of new viruses with pandemic potential. In early 2008, two swine H5N2 viruses were isolated from our routine swine surveillance in Korea. The sequencing and phylogenetic analysis of surface proteins revealed that the Sw/Korea/C12/08 and Sw/Korea/C13/08 viruses were derived from avian influenza viruses of the Eurasian lineage. However, although the Sw/Korea/C12/08 isolate is an entirely avian-like virus, the Sw/Korea/C13/08 isolate is an avian-swine-like reassortant with the PB2, PA, NP, and M genes coming from a 2006 Korean swine H3N1-like virus. The molecular characterization of the two viruses indicated an absence of significant mutations that could be associated with virulence or binding affinity. However, animal experiments showed that the reassortant Sw/Korea/C13/08 virus was more adapted and was more readily transmitted than the purely avian-like virus in a swine experimental model but not in ferrets. Furthermore, seroprevalence in swine sera from 2006 to 2008 suggested that avian H5 viruses have been infecting swine since 2006. Although there are no known potential clinical implications of the avian-swine reassortant virus for pathogenicity in pigs or other species, including humans, at present, the efficient transmissibility of the swine-adapted H5N2 virus could facilitate virus spread and could be a potential model for pandemic, highly pathogenic avian influenza (e.g., H5N1 and H7N7) virus outbreaks or a pandemic strain itself. [ABSTRACT FROM AUTHOR]
- Published
- 2009
- Full Text
- View/download PDF
26. The 5′UTR of porcine reproductive and respiratory syndrome virus strain JXwn06 harbors a uORF that regulates cellular inflammation.
- Author
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Teng Liu, Qi Shao, Zhiying Cui, Pengkai Qing, Peng Gao, Yongning Zhang, Lei Zhou, Xinna Ge, Xin Guo, Jun Han, and Hanchun Yang
- Subjects
- *
VIRUS cloning , *REVERSE genetics , *ANIMAL experimentation , *PORCINE reproductive & respiratory syndrome , *SWINE industry , *GENETIC translation - Abstract
The 5′ untranslated region (5′UTR) of many positive-stranded RNA viruses contain functional regulatory sequences. Here, we show that the porcine reproductive and respiratory syndrome virus (PRRSV), a member of arteriviruses, harbors small upstream open reading frames (uORFs) in its 5′UTR. Bioinformatics analysis shows that this feature is relatively well conserved among PRRSV strains and Arteriviridae. We also identified a uORF, namely uORF2, in the PRRSV strain JXwn06, that possesses translational activity and exerts a suppressive effect on the expression of the primary ORF evidenced by in vitro reporter assays. We tested its importance via reverse genetics by introducing a point mutation into the PRRSV infectious cDNA clone to inactivate the start codon of uORF2. The recovered mutant virus Mut2 surprisingly replicated to the same level as the wild-type virus (WT), but induced a higher level of inflammatory cytokines (e.g., TNF-α, IL-1β, and IL-6) both in vitro and in animal experiments, correlating well with more severe lung injury and higher death rate. In line with this, over-expression of uORF2 in transfected cells significantly inhibited poly(I:C)-induced expression of inflammatory cytokines. Together, our data support the idea that uORF2 encodes a novel, functional regulator of PRRSV virulence despite of its short size. IMPORTANCE PRRSV has remained a major challenge to the world swine industry, but we still do not know much about its biology and pathogenesis. Here, we provide evidence to show that the 5′UTR of PRRSV strain JXwn06 harbors a functional uORF that has the coding capacity and regulates induction of inflammation as demonstrated by in vitro assays and animal experiment. The findings reveal a novel viral factor that regulates cellular inflammation and provide insight into the understanding of PRRSV pathogenesis. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
27. Identification of Nonessential Regions of the nsp2 Replicase Protein of Porcine Reproductive and Respiratory Syndrome Virus Strain VR-2332 for Replication in Cell Culture.
- Author
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Jun Han, Gongping Liu, Yue Wang, and Faaberg, Kay S.
- Subjects
- *
PROTEINS , *VIRUSES , *PORCINE reproductive & respiratory syndrome , *REPRODUCTION , *CELL culture - Abstract
The nonstructural protein 2 (nsp2) of porcine reproductive and respiratory syndrome virus (PRRSV) is a multidomain protein and has been shown to undergo remarkable genetic variation, primarily in its middle region, while exhibiting high conservation in the N-terminal putative protease domain and the C-terminal predicted transmembrane region. A reverse genetics system of PRRSV North American prototype VR-2332 was developed to explore the importance of different regions of nsp2 for viral replication. A series of mutants with in-frame deletions in the nsp2 coding region were engineered, and infectious viruses were subsequently recovered from transfected cells and further characterized. The results demonstrated that the cysteine protease domain (PL2), the PL2 downstream flanking sequence (amino acids [aa] 181 to 323), and the putative transmembrane domain were critical for replication. In contrast, the segment of nsp2 preceding the PL2 domain (aa 13 to 35) was dispensable for viral replication, and the nsp2 middle hypervariable region (aa 324 to 813) tolerated 100-aa or 200-aa deletions but could not be removed as a whole; the largest deletion was about 400 aa (nsp2 Δ 324-726). Characterization of the mutants demonstrated that those with small deletions possessed growth kinetics and RNA expression profiles similar to those of the parental virus, while the nsp2 Δ 324-726 mutant displayed decreased cytolytic activity on MARC-145 cells and did not develop visible plaques. Finally, the utilization of the genetic flexibility of nsp2 to express foreign genes was examined by inserting the gene encoding green fluorescent protein (GFP) in frame into one nsp2 deletion mutant construct. The recombinant virus was viable but impaired and unstable and gradually gained parental growth kinetics by the loss of most of the GFP gene. [ABSTRACT FROM AUTHOR]
- Published
- 2007
- Full Text
- View/download PDF
28. Identification of an Intramolecular Switch That Controls the Interaction of Helicase nsp10 with Membrane-Associated nsp12 of Porcine Reproductive and Respiratory Syndrome Virus.
- Author
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Yunhao Hu, Purui Ke, Peng Gao, Yongning Zhang, Lei Zhou, Xinna Ge, Xin Guo, Jun Han, and Hanchun Yang
- Subjects
- *
PORCINE reproductive & respiratory syndrome , *VIRAL nonstructural proteins , *REVERSE genetics , *MEMBRANE proteins - Abstract
A critical step in replication of positive-stranded RNA viruses is the assembly of replication and transcription complexes (RTC). We have recently mapped the nonstructural protein (nsp) interaction network of porcine reproductive and respiratory syndrome virus (PRRSV) and provided evidence by truncation mutagenesis that the recruitment of viral core replicase enzymes (nsp9 and nsp10) to membrane proteins (nsp2, nsp3, nsp5, and nsp12) is subject to regulation. Here, we went further to discover an intramolecular switch within the helicase nsp10 that controls its interaction with the membrane-associated protein nsp12. Deletion of nsp10 linker region amino acids 124 to 133, connecting domain 1B to 1A, led to complete relocalization and colocalization in the cells coexpressing nsp12. Moreover, single-amino-acid substitutions (e.g., nsp10 E131A and I132A) were sufficient to enable the nsp10-nsp12 interaction. Further proof came from membrane floatation assays that revealed a clear movement of nsp10 mutants, but not wild-type nsp10, toward the top of sucrose gradients in the presence of nsp12. Interestingly, the same mutations were not able to activate the nsp10-nsp2/3 interaction, suggesting a differential requirement for conformation. Reverse genetics analysis showed that PRRSV mutants carrying the single substitutions were not viable and were defective in subgenomic RNA (sgRNA) accumulation. Together, our results provide strong evidence for a regulated interaction between nsp10 and nsp12 and suggest an essential role for an orchestrated RTC assembly in sgRNA synthesis. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
29. Induction of Rod-Shaped Structures by Herpes Simplex Virus Glycoprotein I.
- Author
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Wuchao Zhang, Peng Gao, Xixi Gui, Lei Zhou, Xinna Ge, Xin Guo, Wills, John W., Jun Han, and Hanchun Yang
- Subjects
- *
HERPES simplex virus , *CELL fusion , *REVERSE genetics , *VIRAL transmission , *PROLINE , *GLYCOPROTEINS , *MONOCLONAL antibodies , *CHIMERIC proteins - Abstract
The envelope glycoprotein I (gI) of herpes simplex virus 1 (HSV-1) is a critical mediator of virus-induced cell-to-cell spread and cell-cell fusion. Here, we report a previously unrecognized property of this molecule. In transfected cells, the HSV-1 gI was discovered to induce rod-shaped structures that were uniform in width but variable in length. Moreover, the gI within these structures was conformationally different from the typical form of gI, as a previously used monoclonal antibody mAb3104 and a newly made peptide antibody to the gI extracellular domain (ECD) (amino acids [aa] 110 to 202) both failed to stain the long rod-shaped structures, suggesting the formation of a higher-order form. Consistent with this observation, we found that gI could self-interact and that the rod-shaped structures failed to recognize glycoprotein E, the well-known binding partner of gI. Further analyses by deletion mutagenesis and construction of chimeric mutants between gI and gD revealed that the gI ECD is the critical determinant, whereas the transmembrane domain served merely as an anchor. The critical amino acids were subsequently mapped to proline residues 184 and 188 within a conserved PXXXP motif. Reverse genetics analyses showed that the ability to induce a rod-shaped structure was not required for viral replication and spread in cell culture but rather correlated positively with the capability of the virus to induce cell fusion in the UL24syn background. Together, this work discovered a novel feature of HSV-1 gI that may have important implications in understanding gI function in viral spread and pathogenesis. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
30. The nsp2 Hypervariable Region of Porcine Reproductive and Respiratory Syndrome Virus Strain JXwn06 Is Associated with Viral Cellular Tropism to Primary Porcine Alveolar Macrophages.
- Author
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Jiangwei Song, Peng Gao, Can Kong, Lei Zhou, Xinna Ge, Xin Guo, Jun Han, and Hanchun Yang
- Subjects
- *
HYPERVARIABLE regions , *VIRAL tropism , *ALVEOLAR macrophages , *PORCINE reproductive & respiratory syndrome , *RNA synthesis - Abstract
Porcine reproductive and respiratory syndrome virus (PRRSV) poses a major threat to global pork production and has been notorious for its rapid genetic evolution in the field. The nonstructural protein 2 (nsp2) replicase protein represents the fastest evolving region of PRRSV, but the underlying biological significance has remained poorly understood. By deletion mutagenesis, we discovered that the nsp2 hypervariable region plays an important role in controlling the balance of genomic mRNA and a subset of subgenomic mRNAs. More significantly, we revealed an unexpected link of the nsp2 hypervariable region to viral tropism. Specifically, a mutant of the Chinese highly pathogenic PRRSV strain JXwn06 carrying a deletion spanning nsp2 amino acids 323 to 521 (nsp2Δ323--521) in its hypervariable region was found to lose infectivity in primary porcine alveolar macrophages (PAMs), although it could replicate relatively efficiently in the supporting cell line MARC-145. Consequently, this mutant failed to establish an infection in piglets. Further dissection of the viral life cycle revealed that the mutant had a defect (or defects) lying in the steps between virus penetration and negative-stranded RNA synthesis. Taken together, our results reveal novel functions of nsp2 in the PRRSV life cycle and provide important insights into the mechanisms of PRRSV RNA synthesis and cellular tropism. IMPORTANCE The PRRSV nsp2 replicase protein undergoes rapid and broad genetic variations in its middle region in the field, but the underlying significance has remained enigmatic. Here, we demonstrate that the nsp2 hypervariable region not only plays an important regulatory role in maintaining the balance of different viral mRNA species but also regulates PRRSV tropism to primary PAMs. Our results reveal novel functions for PRRSV nsp2 and have important implications for understanding the mechanisms of PRRSV RNA synthesis and cellular tropism. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
31. The S Gene Is Necessary but Not Sufficient for the Virulence of Porcine Epidemic Diarrhea Virus Novel Variant Strain BJ2011C.
- Author
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Di Wang, Xinna Ge, Dongjie Chen, Jie Li, Yueqi Cai, Jin Deng, Lei Zhou, Xin Guo, Jun Han, and Hanchun Yang
- Subjects
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MICROBIAL virulence , *PORCINE epidemic diarrhea virus , *SWINE diseases , *CHIMERIC enzymes , *EPIDEMICS - Abstract
The recently emerged highly virulent variants of porcine epidemic diarrhea virus (PEDV) have caused colossal economic losses to the worldwide swine industry. In this study, we investigated the viral virulence determinants by constructing a series of chimeric mutants between the highly virulent strain BJ2011C and the avirulent strain CHM2013. When tested in the 2-day-old piglet model, wild-type (WT) BJ2011C caused severe diarrhea and death of the piglets within 72 h. In contrast, its chimeric derivative carrying the S gene from CHM2013 (BJ2011C-SCHM) was avirulent to the piglets. Moreover, reciprocal substitution of the BJ2011C S gene (CHM2013- SBJ) did not enable CHM2013 to gain any virulence. However, when the whole structural protein-coding region of BJ2011C (CHM2013-SPBJ) was swapped, CHM2013 started to gain the ability to efficiently colonize the intestinal tract and caused diarrhea in piglets. A further gain of virulence required additional acquisition of the 3= untranslated region (UTR) of BJ2011C, and the resultant virus (CHM2013-SP + 3UTRBJ) caused more severe diarrhea and death of piglets. Together, our findings suggest that the virulence of PEDV epidemic strains is a multigenic event and that the S gene is only one of the necessary determinants. IMPORTANCE The recently emerged highly virulent PEDV variants are the major cause of the global porcine epidemic diarrhea (PED) pandemic. The S gene of the variants undergoes remarkable variations and has been thought to be the virulence determinant for the enhanced pathogenesis. Our studies here showed that the S gene is only part of the story and that full virulence requires cooperation from other genes. Our findings provide insight into the pathogenic mechanism of the highly virulent PEDV variants and have implications for future vaccine development. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
32. Domain Interaction Studies of Herpes Simplex Virus 1 Tegument Protein UL16 Reveal Its Interaction with Mitochondria.
- Author
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Chadha, Pooja, Sarfo, Akua, Dan Zhang, Abraham, Thomas, Carmichael, Jillian, Jun Han, and Wills, John W.
- Subjects
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HERPES simplex virus , *VIRAL proteins , *MITOCHONDRIA , *VIRAL replication , *C-terminal residues , *IMMUNOPRECIPITATION , *ELECTRON microscopy - Abstract
The UL16 tegument protein of herpes simplex virus 1 (HSV-1) is conserved among all herpesviruses and plays many roles during replication. This protein has an N-terminal domain (NTD) that has been shown to bind to several viral proteins, including UL11, VP22, and glycoprotein E, and these interactions are negatively regulated by a C-terminal domain (CTD). Thus, in pairwise transfections, UL16 binding is enabled only when the CTD is absent or altered. Based on these results, we hypothesized that direct interactions occur between the NTD and the CTD. Here we report that the separated and coexpressed functional domains of UL16 are mutually responsive to each other in transfected cells and form complexes that are stable enough to be captured in coimmunoprecipitation assays. Moreover, we found that the CTD can associate with itself. To our surprise, the CTD was also found to contain a novel and intrinsic ability to localize to specific spots on mitochondria in transfected cells. Subsequent analyses of HSV-infected cells by immunogold electron microscopy and live-cell confocal imaging revealed a population of UL16 that does not merely accumulate on mitochondria but in fact makes dynamic contacts with these organelles in a time-dependent manner. These findings suggest that the domain interactions of UL16 serve to regulate not just the interaction of this tegument protein with its viral binding partners but also its interactions with mitochondria. The purpose of this novel interaction remains to be determined. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
33. Virulence and Genetic Compatibility of Polymerase Reassortant Viruses Derived from the Pandemic (H1N1) 2009 Influenza Virus and Circulating Influenza A Viruses.
- Author
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Min-Suk Song, Pascua, Philippe Noriel Q., Jun Han Lee, Yun Hee Baek, Kuk Jin Park, Hyeok-il Kwon, Su-Jin Park, Chul-Joong Kim, Hyunggee Kim, Webby, Richard J., Webster, Robert G., and Young Ki Choi
- Subjects
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SWINE influenza , *INFLUENZA A virus , *MICROBIAL mutation , *PANDEMICS , *VIRUS diseases - Abstract
Gene mutations and reassortment are key mechanisms by which influenza A virus acquires virulence factors. To evaluate the role of the viral polymerase replication machinery in producing virulent pandemic (H1N1) 2009 influenza viruses, we generated various polymerase point mutants (PB2, 627K/701N; PB1, expression of PB1-F2 protein; and PA, 97I) and reassortant viruses with various sources of influenza viruses by reverse genetics. Although the point mutations produced no significant change in pathogenicity, reassortment between the pandemic A/California/04/09 (CA04, H1N1) and current human and animal influenza viruses produced variants possessing a broad spectrum of pathogenicity in the mouse model. Although most polymerase reassortants had attenuated pathogenicity (including those containing seasonal human H3N2 and high-pathogenicity H5N1 virus segments) compared to that of the parental CA04 (H1N1) virus, some recombinants had significantly enhanced virulence. Unexpectedly, one of the five highly virulent reassortants contained a A/Swine/Korea/JNS06/04(H3N2)-like PB2 gene with no known virulence factors; the other four had mammalian-passaged avian-like genes encoding PB2 featuring 627K, PA featuring 97I, or both. Overall, the reassorted polymerase complexes were only moderately compatible for virus rescue, probably because of disrupted molecular interactions involving viral or host proteins. Although we observed close cooperation between PB2 and PB1 from similar virus origins, we found that PA appears to be crucial in maintaining viral gene functions in the context of the CA04 (H1N1) virus. These observations provide helpful insights into the pathogenic potential of reassortant influenza viruses composed of the pandemic (H1N1) 2009 influenza virus and prevailing human or animal influenza viruses that could emerge in the future. [ABSTRACT FROM AUTHOR]
- Published
- 2011
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34. Targeting Swine Leukocyte Antigen Class I Molecules for Proteasomal Degradation by the nsp1α Replicase Protein of the Chinese Highly Pathogenic Porcine Reproductive and Respiratory Syndrome Virus Strain JXwn06.
- Author
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Jige Du, Xinna Ge, Ying Liu, Ping Jiang, Zhe Wang, Ruimin Zhang, Lei Zhou, Xin Guo, Jun Han, and Hanchun Yang
- Subjects
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PORCINE reproductive & respiratory syndrome , *LEUCOCYTES , *MUTAGENESIS , *CELLULAR immunity , *SWINE - Abstract
Porcine reproductive and respiratory syndrome virus (PRRSV) is a critical pathogen of swine, and infections by this virus often result in delayed, low-level induction of cytotoxic T lymphocyte (CTL) responses in pigs. Here, we report that a Chinese highly pathogenic PRRSV strain possessed the ability to downregulate swine leukocyte antigen class I (SLA-I) molecules on the cell surface of porcine alveolar macrophages and target them for degradation in a manner that was dependent on the ubiquitin-proteasome system. Moreover, we found that the nsp1α replicase protein contributed to this property of PRRSV. Further mutagenesis analyses revealed that this function of nsp1α required the intact molecule, including the zinc finger domain, but not the cysteine protease activity. More importantly, we found that nsp1α was able to interact with both chains of SLA-I, a requirement that is commonly needed for many viral proteins to target their cellular substrates for proteasomal degradation. Together, our findings provide critical insights into the mechanisms of how PRRSV might evade cellular immunity and also add a new role for nsp1α in PRRSV infection. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
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