40 results on '"Weimin Ye"'
Search Results
2. Description of Gracilacus paralatescens n. sp. (Nematoda:Paratylenchinae) found from the rhizosphere of Bamboo in Zhejiang, China
- Author
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Munawar Maria, Ruihang Cai, Weimin Ye, Thomas O. Powers, and Jingwu Zheng
- Subjects
DNA sequencing ,Morphology ,Morphometrics ,Nematode ,New species ,Phylogeny ,Biology (General) ,QH301-705.5 - Published
- 2018
- Full Text
- View/download PDF
3. Description of Xiphinema parachambersi sp. n. (Nematoda: Longidoridae) from Imported Ornamental Plants in Japan with a Key to Xiphinema Species in Group 1
- Author
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Munawar Maria, Weimin Ye, Qing Yu, and Jianfeng Gu
- Subjects
Molecular ,morphology ,morphometrics ,nematode ,new species ,Biology (General) ,QH301-705.5 - Published
- 2018
- Full Text
- View/download PDF
4. Incidence of Oscheius onirici (Nematoda: Rhabditidae), a potentially entomopathogenic nematode from the marshlands of Wisconsin, USA
- Author
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Weimin Ye, Shane Foye, Ann E. MacGuidwin, and Shawn Steffan
- Subjects
Cranberry ,characterization ,DNA sequencing ,entomopathogenic nematode ,Dolichura-group ,molecular phylogeny ,Biology (General) ,QH301-705.5 - Published
- 2018
- Full Text
- View/download PDF
5. Delatylus andersoni n. gen., n. sp. (Nematoda: Neotylenchidae) Isolated from White Pine (Pinus monticola) Lumber from USA and Intercepted in Ningbo, China
- Author
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Qing Yu, Maria Munawar, Jianfeng Gu, and Weimin Ye
- Subjects
molecular ,morphology ,morphometric ,nematode ,new genus ,new species ,Biology (General) ,QH301-705.5 - Published
- 2018
- Full Text
- View/download PDF
6. Description of a New Anguinid Nematode, Nothotylenchus phoenixae n. sp. (Nematoda: Anguinidae) Associated with Palm Date Trees and Its Phylogenetic Relations within the Family Anguinidae
- Author
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MEHRAB ESMAEILI, RAMIN HEYDARI, and WEIMIN YE
- Subjects
28S D2/D3 ,ITS ,molecular phylogeny ,morphology ,new species ,partial 18S ,Biology (General) ,QH301-705.5 - Published
- 2017
- Full Text
- View/download PDF
7. Xiphinema japonicum n. sp. (Nematoda: Longidorinae) from the Rhizosphere of Japanese Podocarpus macrophyllus (Thunb.), a Cryptic Species Related to Xiphinema bakeri Williams, 1961
- Author
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LIRONG ZHAO, WEIMIN YE, MUNAWAR MARIA, MAJID PEDRAM, and JIANFENG GU
- Subjects
molecular ,morphology ,morphometrics ,new species ,phylogeny ,taxonomy ,Biology (General) ,QH301-705.5 - Published
- 2017
- Full Text
- View/download PDF
8. Deladenus posteroporus n. sp. (Nematoda: Neotylenchidae) Isolated from Packaging Wood from Canada and White Pine (Pinus monticola) Lumber from the United States and Intercepted in Ningbo, China
- Author
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Qing Yu, Jianfeng Gu, Weimin Ye, Rusong Li, and Jie He
- Subjects
molecular ,morphology ,morphometrics ,nematode ,new species ,taxonomy ,Biology (General) ,QH301-705.5 - Published
- 2017
- Full Text
- View/download PDF
9. Morphological and Molecular Characterization of Gracilacus wuae n. sp. (Nematoda: Criconematoidea) Associated with Cow Parsnip (Heracleum maximum) in Ontario, Canada
- Author
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QING YU, WEIMIN YE, and TOM POWERS
- Subjects
Gracilacus ,molecular ,morphology ,morphometric ,new species ,Paratylenchus ,Biology (General) ,QH301-705.5 - Published
- 2016
- Full Text
- View/download PDF
10. Paurodontella parapitica n. sp. (Nematoda: Hexatylina, Sphaerularioidea) from Kermanshah Province, Western Iran
- Author
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MEHRAB ESMAEILI, RAMIN HEYDARI, and WEIMIN YE
- Subjects
28S D2/D3 ,new species ,molecular phylogeny ,morphology ,taxonomy. ,Biology (General) ,QH301-705.5 - Published
- 2016
- Full Text
- View/download PDF
11. Description of Deladenus gilanica n. sp. (Hexatylina: Neotylenchidae) isolated from wood of black pine in Northern Iran
- Author
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Ramin Heydari, Mehrab Esmaeili, Weimin Ye, and Parisa Jalalinasab
- Subjects
0106 biological sciences ,Morphometrics ,Morphology ,Species complex ,Phylogenetic tree ,Arts & Humanities ,010607 zoology ,Zoology ,Molecular ,rRNA gene ,Morphology (biology) ,Biology ,01 natural sciences ,18S ribosomal RNA ,New species ,lcsh:Biology (General) ,Excretory system ,Genus ,28S ribosomal RNA ,lcsh:QH301-705.5 ,010606 plant biology & botany ,Nematode - Abstract
A new species of the genus Deladenus, D. gilanica n. sp. collected from Siahkal forests of Northern Iran, is described and illustrated. The new species is characterized by its 314 to 422-µm-long body, eight incisures in the lateral field, 7.5 to 8.0-μm-long stylet, position of the excretory pore, at the level of the hemizonid, both posterior to the nerve ring 61 to 76 µm from the anterior end, and conical tail with pointed tip. Based on morphology and morphometrics, the new species can be compared with eight known species of the genus: D. aridus, D. durus, D. obesus, D. oryzae, D. processus, D. wilsoni, D. proximus, and D. posteroporus. Evolutionary relationships of the new species with other Deladenus species were assessed with sequences of the D2 to D3 expansion regions of 28S rRNA and partial 18S rRNA gene. The phylogenetic analysis showed that D. gilanica n. sp. is genetically distinct from other included species. Deladenus gilanica n. sp. is a member of the D. siricidicola species complex and close to D. canii, D. nitobei, and D. siricidicola. Typologically, these species share the relative position of the excretory pore to the hemizonid. A new species of the genus Deladenus, D. gilanica n. sp. collected from Siahkal forests of Northern Iran, is described and illustrated. The new species is characterized by its 314 to 422-µm-long body, eight incisures in the lateral field, 7.5 to 8.0-μm-long stylet, position of the excretory pore, at the level of the hemizonid, both posterior to the nerve ring 61 to 76 µm from the anterior end, and conical tail with pointed tip. Based on morphology and morphometrics, the new species can be compared with eight known species of the genus: D. aridus, D. durus, D. obesus, D. oryzae, D. processus, D. wilsoni, D. proximus, and D. posteroporus. Evolutionary relationships of the new species with other Deladenus species were assessed with sequences of the D2 to D3 expansion regions of 28S rRNA and partial 18S rRNA gene. The phylogenetic analysis showed that D. gilanica n. sp. is genetically distinct from other included species. Deladenus gilanica n. sp. is a member of the D. siricidicola species complex and close to D. canii, D. nitobei, and D. siricidicola. Typologically, these species share the relative position of the excretory pore to the hemizonid.
- Published
- 2020
12. First report of Meloidogyne javanica on Ginger and Turmeric in the United States
- Author
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Weimin Ye, Brooke B. Hampton, and Abolfazl Hajihassani
- Subjects
Georgia ,Root-knot nematode ,biology ,biology.organism_classification ,medicine.disease ,Rhizomes ,Rhizome ,Horticulture ,Nematode ,lcsh:Biology (General) ,Nematode infection ,medicine ,Meloidogyne incognita ,Pathogenicity ,Zingiber officinale ,Organic vegetables ,Curcuma ,lcsh:QH301-705.5 ,Meloidogyne javanica ,Terra incognita - Abstract
Ginger (Zingiber officinale L.) and turmeric (Curcuma longa L.) are two her baceous perennial plant species with rhizomes that are commonly used for flavoring or medicinal purposes. In January 2018, stunting and poorly developed root systems typically associated with plant-parasitic nematode infection were observed on organically grown edible ginger and turmeric in a hoop house in Wheeler County, Georgia. Examination of soil and root samples from symptomatic plants revealed the presence of high populations of root-knot nematodes (Meloidogyne spp.). The second-stage juveniles (J2s) were extracted from soil samples as described by Jenkins (1964). Nematode counts were 285 and 155 J2s per 100 cm3 soil in the areas planted with ginger and turmeric, respectively. Nematode eggs were recovered from infected root systems using the bleach (1%) and blending method (Hussey and Barker, 1973). Examination of the root samples showed the presence of 840 and 320 eggs per g of roots in ginger and turmeric, respectively. Primary diagnosis of the Meloidogyne specimens was done by comparing morphological features observed in the J2s (n = 10) and perineal pattern of females (n = 11) based on the description given by Eisenback and Triantaphyllou (1991) and were tentatively identified as M. javanica (Treub, 1885; Chitwood, 1949). For species identification, DNA sequencing was performed using multiple markers located in 18S ribosomal RNA and 5.8S internal transcribed spacer 1 regions, (18S + ITS) (GenBank Accession No. MK390613), 28S domain 2 and 3 (28S D2/D3) (MK385596), cytochrome oxidase subunit I (COI) (MK391558), and subunit II and 16S (COII + 16S) (MK391557) of mitochondrial DNA following methods as described in Ye et al. (2015). PCR assays by species-specific primers were also conducted to confirm species identity as described by Zijlstra et al. (2000). The blast search results of DNA sequences of 18S + ITS, 28S (D2/D3), COI and COII + 16S revealed the best match as M. javanica, M. incognita (Kofoid and White, 1912; Chitwood, 1949) and M. arenaria (Neal, 1889; Chitwood, 1949) with 99-100% identity. These genes are highly conserved across these three most common root-knot nematode species. However, results of PCR assays by species-specific primers were only positive for M. javanica using primers Fjav/Rjav, but negative for M. incognita by Finc/Rinc and M. arenaria by Far/Rar as described by Zijlstra et al. (2000). Based on morphological characteristics and molecular analyses, the root-knot nematodes infecting ginger and turmeric were identified as M. javanica. After confirmation of the nematode species, a test was conducted in the greenhouse to assess the pathogenicity of the nematode on ginger and turmeric. Five seedlings per plant species (cultivars unknown) were grown in 15 cm-diam plastic pots containing equal parts of pasteurized field soil and sand, and then inoculated with 2,000 eggs of M. javanica. The egg suspension was added into three holes around the base of each seedling. Non-inoculated seedlings (n2 = 25) were used as controls. Plants were arranged in completely randomized design and grown at 25 ± 3 °C for 10 weeks. At the termination of the experiment, small galls were noticed on the roots of the inoculated seedlings of both ginger and turmeric. No galls were observed on the roots of non-inoculated plants. Egg were extracted from the galled roots (Hussey and Barker, 1973) yielding an average of 1040 ± 96 and 732 ± 54 eggs per g of root of ginger and turmeric, respectively. On ginger, the nematode produced large numbers of galls and egg masses on both primary and secondary (feeder) roots, but the galls produced on turmeric were often observed only on primary roots (Fig. 1). No symptoms of root-knot nematode infestation including galls or water-soaked lesions were observed on the outer surface of rhizomes of both ginger and turmeric. However, the size of rhizomes in the M. javanica-infested areas was visibly smaller than that in non-infested areas (Fig. 2). A similar reduction in the growth of turmeric rhizomes was also observed. Meloidogyne incognita has been commonly reported as a nematode pest of ginger (Myers et al., 2017) and turmeric (Hall et al., 2017) in the USA and both M. incognita and M. javanica are known to cause damage on these plant hosts (Ray et al., 1995; Singh and Gupta, 2011). To the best of our knowledge, this is the first report of M. javanica on ginger and turmeric in the USA. Ginger (Zingiber officinale L.) and turmeric (Curcuma longa L.) are two her baceous perennial plant species with rhizomes that are commonly used for flavoring or medicinal purposes. In January 2018, stunting and poorly developed root systems typically associated with plant-parasitic nematode infection were observed on organically grown edible ginger and turmeric in a hoop house in Wheeler County, Georgia. Examination of soil and root samples from symptomatic plants revealed the presence of high populations of root-knot nematodes (Meloidogyne spp.). The second-stage juveniles (J2s) were extracted from soil samples as described by Jenkins (1964). Nematode counts were 285 and 155 J2s per 100 cm3 soil in the areas planted with ginger and turmeric, respectively. Nematode eggs were recovered from infected root systems using the bleach (1%) and blending method (Hussey and Barker, 1973). Examination of the root samples showed the presence of 840 and 320 eggs per g of roots in ginger and turmeric, respectively. Primary diagnosis of the Meloidogyne specimens was done by comparing morphological features observed in the J2s (n = 10) and perineal pattern of females (n = 11) based on the description given by Eisenback and Triantaphyllou (1991) and were tentatively identified as M. javanica (Treub, 1885; Chitwood, 1949). For species identification, DNA sequencing was performed using multiple markers located in 18S ribosomal RNA and 5.8S internal transcribed spacer 1 regions, (18S + ITS) (GenBank Accession No. MK390613), 28S domain 2 and 3 (28S D2/D3) (MK385596), cytochrome oxidase subunit I (COI) (MK391558), and subunit II and 16S (COII + 16S) (MK391557) of mitochondrial DNA following methods as described in Ye et al. (2015). PCR assays by species-specific primers were also conducted to confirm species identity as described by Zijlstra et al. (2000). The blast search results of DNA sequences of 18S + ITS, 28S (D2/D3), COI and COII + 16S revealed the best match as M. javanica, M. incognita (Kofoid and White, 1912; Chitwood, 1949) and M. arenaria (Neal, 1889; Chitwood, 1949) with 99–100% identity. These genes are highly conserved across these three most common root-knot nematode species. However, results of PCR assays by species-specific primers were only positive for M. javanica using primers Fjav/Rjav, but negative for M. incognita by Finc/Rinc and M. arenaria by Far/Rar as described by Zijlstra et al. (2000). Based on morphological characteristics and molecular analyses, the root-knot nematodes infecting ginger and turmeric were identified as M. javanica. After confirmation of the nematode species, a test was conducted in the greenhouse to assess the pathogenicity of the nematode on ginger and turmeric. Five seedlings per plant species (cultivars unknown) were grown in 15 cm-diam plastic pots containing equal parts of pasteurized field soil and sand, and then inoculated with 2,000 eggs of M. javanica. The egg suspension was added into three holes around the base of each seedling. Non-inoculated seedlings (n2 = 25) were used as controls. Plants were arranged in completely randomized design and grown at 25 ± 3 °C for 10 weeks. At the termination of the experiment, small galls were noticed on the roots of the inoculated seedlings of both ginger and turmeric. No galls were observed on the roots of non-inoculated plants. Egg were extracted from the galled roots (Hussey and Barker, 1973) yielding an average of 1040 ± 96 and 732 ± 54 eggs per g of root of ginger and turmeric, respectively. On ginger, the nematode produced large numbers of galls and egg masses on both primary and secondary (feeder) roots, but the galls produced on turmeric were often observed only on primary roots (Fig. 1). No symptoms of root-knot nematode infestation including galls or water-soaked lesions were observed on the outer surface of rhizomes of both ginger and turmeric. However, the size of rhizomes in the M. javanica-infested areas was visibly smaller than that in non-infested areas (Fig. 2). A similar reduction in the growth of turmeric rhizomes was also observed. Meloidogyne incognita has been commonly reported as a nematode pest of ginger (Myers et al., 2017) and turmeric (Hall et al., 2017) in the USA and both M. incognita and M. javanica are known to cause damage on these plant hosts (Ray et al., 1995; Singh and Gupta, 2011). To the best of our knowledge, this is the first report of M. javanica on ginger and turmeric in the USA.
- Published
- 2019
13. Updated description of
- Author
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Weimin Ye, Munawar Maria, Wentao Miao, and Jingwu Zheng
- Subjects
Lateral field ,Morphometrics ,Rhizosphere ,food.ingredient ,biology ,morphometrics ,Lepidus ,nematode ,Life Sciences ,Pinus species ,Paratylenchus lepidus ,biology.organism_classification ,phylogeny ,food ,Nematode ,Botany ,morphology ,Pinus tabulaeformis ,Elaeocarpus ,new record ,DNA sequencing ,scanning electron microscopy - Abstract
Two populations of Paratylenchus lepidus and P. minor were detected in the rhizosphere of Elaeocarpus sp. and Chinese red pine from Taizhou and Hangzhou, Zhejiang Province, China. Previously, P. lepidus has been reported from China whereas P. minor was originally described from India decades ago in the rhizosphere of peach but was never reported thereafter. In this study, both species were characterized morphologically and molecularly coupled with SEM observations. Morphologically, both species have four incisures in the lateral field, vulval present (SEM observations), stylet less than 30 μ m long and cephalic region without submedian lobes. Phylogenetically, both species grouped with paratylenchid species having short stylets. Both species can be differentiated from each other by the shape of lip region (rounded in P. lepidus and narrow truncated in P. minor) and tail terminus (pointed in P. lepidus and a broadly rounded in P. minor) and several morphomemtrical values.The study provided an updated description of P. lepidus and P. minor and a first record of P. minor from China. In addition, both species are the first paratylenchid species recorded from Elaeocarpus sp. and Pinus tabuliformis, respectively.
- Published
- 2019
14. Molecular and morphological characterization of Paurodontella composticola n. sp. (Nematoda: Hexatylina, Sphaerulariidae) from Iran
- Author
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Weimin Ye, Ahmad Kheiri, Ramin Heydari, and Mehrab Esmaeili
- Subjects
0106 biological sciences ,Morphology ,Phylogenetic tree ,010607 zoology ,Uterus ,Lumen (anatomy) ,Life Sciences ,Anatomy ,Molecular phylogeny ,Biology ,01 natural sciences ,Stylet ,New species ,Sponge spicule ,medicine.anatomical_structure ,lcsh:Biology (General) ,Excretory system ,medicine ,Oviduct ,Conoid ,28S D2/D3 ,lcsh:QH301-705.5 ,010606 plant biology & botany ,Taxonomy - Abstract
A new species of the genus Paurodontella, P. composticola n. sp., collected from Nazar Abad City, Alborz Province, Iran, is described and illustrated. The new species has a body length of 803-1053 μ m (females n = 10) and 620 and 739 μ m (males n = 2). The cuticle is weakly annulated with four lateral lines. Cephalic region is annulated and continuous with body contour. The stylet is 8.0 to 9.0 μ m long with asymmetrical knobs. Esophageal basal bulb is present with a small posterior extension projecting into the intestine. Excretory pore is situated at the level of esophageal basal bulb region. Post-uterine sac is 5 to 8 μ m long and uterus is without diverticulum. Tails of both sexes are similar, short and sub-cylindrical. Males have 24 to 25 μ m long bursa leptoderan and spicules 24 or 25 µm long. A non-branching oviduct is present to form a uterine diverticulum; the new species is closely related to five known species of the genus, namely P. asymmetrica, P. balochistanica, P. densa, P. iranica and P. niger. It most closely resembles P. iranica, but differs from it morphologically by a shorter stem-like extension projecting into lumen of intestine and male with sub-cylindrical tail vs conoid. In addition to morphological comparisons, the molecular phylogenetic analyses based on 733 bp of the partial sequence of 28S D2/D3 expansion segments of the large subunit rDNA gene (LSU) revealed this as a new species. A new species of the genus Paurodontella, P. composticola n. sp., collected from Nazar Abad City, Alborz Province, Iran, is described and illustrated. The new species has a body length of 803–1053 μ m (females n = 10) and 620 and 739 μ m (males n = 2). The cuticle is weakly annulated with four lateral lines. Cephalic region is annulated and continuous with body contour. The stylet is 8.0 to 9.0 μ m long with asymmetrical knobs. Esophageal basal bulb is present with a small posterior extension projecting into the intestine. Excretory pore is situated at the level of esophageal basal bulb region. Post-uterine sac is 5 to 8 μ m long and uterus is without diverticulum. Tails of both sexes are similar, short and sub-cylindrical. Males have 24 to 25 μ m long bursa leptoderan and spicules 24 or 25 µm long. A non-branching oviduct is present to form a uterine diverticulum; the new species is closely related to five known species of the genus, namely P. asymmetrica, P. balochistanica, P. densa, P. iranica and P. niger. It most closely resembles P. iranica, but differs from it morphologically by a shorter stem-like extension projecting into lumen of intestine and male with sub-cylindrical tail vs conoid. In addition to morphological comparisons, the molecular phylogenetic analyses based on 733 bp of the partial sequence of 28S D2/D3 expansion segments of the large subunit rDNA gene (LSU) revealed this as a new species.
- Published
- 2019
15. First report of
- Author
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Abolfazl, Hajihassani, Weimin, Ye, and Brooke B, Hampton
- Subjects
Georgia ,Root-knot nematode ,Life Sciences ,Pathogenicity ,Organic vegetables ,Rhizomes - Abstract
Ginger (Zingiber officinale L.) and turmeric (Curcuma longa L.) are two her baceous perennial plant species with rhizomes that are commonly used for flavoring or medicinal purposes. In January 2018, stunting and poorly developed root systems typically associated with plant-parasitic nematode infection were observed on organically grown edible ginger and turmeric in a hoop house in Wheeler County, Georgia. Examination of soil and root samples from symptomatic plants revealed the presence of high populations of root-knot nematodes (Meloidogyne spp.). The second-stage juveniles (J2s) were extracted from soil samples as described by Jenkins (1964). Nematode counts were 285 and 155 J2s per 100 cm3 soil in the areas planted with ginger and turmeric, respectively. Nematode eggs were recovered from infected root systems using the bleach (1%) and blending method (Hussey and Barker, 1973). Examination of the root samples showed the presence of 840 and 320 eggs per g of roots in ginger and turmeric, respectively. Primary diagnosis of the Meloidogyne specimens was done by comparing morphological features observed in the J2s (n = 10) and perineal pattern of females (n = 11) based on the description given by Eisenback and Triantaphyllou (1991) and were tentatively identified as M. javanica (Treub, 1885; Chitwood, 1949). For species identification, DNA sequencing was performed using multiple markers located in 18S ribosomal RNA and 5.8S internal transcribed spacer 1 regions, (18S + ITS) (GenBank Accession No. MK390613), 28S domain 2 and 3 (28S D2/D3) (MK385596), cytochrome oxidase subunit I (COI) (MK391558), and subunit II and 16S (COII + 16S) (MK391557) of mitochondrial DNA following methods as described in Ye et al. (2015). PCR assays by species-specific primers were also conducted to confirm species identity as described by Zijlstra et al. (2000). The blast search results of DNA sequences of 18S + ITS, 28S (D2/D3), COI and COII + 16S revealed the best match as M. javanica, M. incognita (Kofoid and White, 1912; Chitwood, 1949) and M. arenaria (Neal, 1889; Chitwood, 1949) with 99–100% identity. These genes are highly conserved across these three most common root-knot nematode species. However, results of PCR assays by species-specific primers were only positive for M. javanica using primers Fjav/Rjav, but negative for M. incognita by Finc/Rinc and M. arenaria by Far/Rar as described by Zijlstra et al. (2000). Based on morphological characteristics and molecular analyses, the root-knot nematodes infecting ginger and turmeric were identified as M. javanica. After confirmation of the nematode species, a test was conducted in the greenhouse to assess the pathogenicity of the nematode on ginger and turmeric. Five seedlings per plant species (cultivars unknown) were grown in 15 cm-diam plastic pots containing equal parts of pasteurized field soil and sand, and then inoculated with 2,000 eggs of M. javanica. The egg suspension was added into three holes around the base of each seedling. Non-inoculated seedlings (n2 = 25) were used as controls. Plants were arranged in completely randomized design and grown at 25 ± 3 °C for 10 weeks. At the termination of the experiment, small galls were noticed on the roots of the inoculated seedlings of both ginger and turmeric. No galls were observed on the roots of non-inoculated plants. Egg were extracted from the galled roots (Hussey and Barker, 1973) yielding an average of 1040 ± 96 and 732 ± 54 eggs per g of root of ginger and turmeric, respectively. On ginger, the nematode produced large numbers of galls and egg masses on both primary and secondary (feeder) roots, but the galls produced on turmeric were often observed only on primary roots (Fig. 1). No symptoms of root-knot nematode infestation including galls or water-soaked lesions were observed on the outer surface of rhizomes of both ginger and turmeric. However, the size of rhizomes in the M. javanica-infested areas was visibly smaller than that in non-infested areas (Fig. 2). A similar reduction in the growth of turmeric rhizomes was also observed. Meloidogyne incognita has been commonly reported as a nematode pest of ginger (Myers et al., 2017) and turmeric (Hall et al., 2017) in the USA and both M. incognita and M. javanica are known to cause damage on these plant hosts (Ray et al., 1995; Singh and Gupta, 2011). To the best of our knowledge, this is the first report of M. javanica on ginger and turmeric in the USA.
- Published
- 2019
16. Description of
- Author
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Munawar, Maria, Weimin, Ye, Qing, Yu, and Jianfeng, Gu
- Subjects
Life Sciences - Abstract
Xiphinema parachambersi n. sp. recovered in Ningbo, China, from the rhizosphere of ornamental plants ( Gardenia jasminoides and Euonymus hamiltonianus ) imported from Japan is described. The new species is characterized by a long female body 1,830 to 2,109 μ m long, odontostyle 105 to 116 μ m long, reproductive system mono-opisthodelphic, vulva located anteriorly at 25.2 to 27.7% of total body, long ovary 119 to 292 μ m with simple uterus and Z-organ absent, female tail elongated conoid with a rounded terminus. Only two juvenile stages were available to study and no male was found. The polytomous identification codes for this new species are A1, B4, C2, D23, E1, F2, G2, H2, I2, J2, K?, L1 and it belongs to the morphospecies group 1. Phylogenetic analysis based on the 18S, ITS1 and 28S D2/D3 sequences of the new species showed close relationships with X. chambersi . Morphologically, the new species is similar to X. chambersi , X. hangzhouense , and X. winotoi but can be differentiated by morphological characters and DNA sequences. To help identify the species, a diagnostic key to the group 1 species is presented.
- Published
- 2018
17. First report of the sting nematode Belonolaimus longicaudatus infecting bermudagrass in Barbados
- Author
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E. Nangle, P. Mc Groary, and Weimin Ye
- Subjects
Sting ,Nematode ,lcsh:Biology (General) ,Agronomy ,biology ,Belonolaimus longicaudatus ,Barbados ,Bermudagrass ,Cynodon dactylon ,First report ,biology.organism_classification ,lcsh:QH301-705.5 - Abstract
In 2016, "Tifdwarf" hybrid bermudagrass (Cynodon dactylon (L) Pers. × C. transvaalensis Burtt-Davy) grown on a golf green built to the United States Golf Association recommendations in Barbados started to show irregular significant chlorotic patches followed by gradual thinning and decline of turfgrass. A survey was conducted in May 2016 to determine the presence of plant-parasitic nematodes. The results revealed the presence of the plant-parasitic sting nematode Belonolaimus longicaudatus. To our knowledge, this is the first report of B. longicaudatus associated with bermudagrass in Barbados. In 2016, “Tifdwarf” hybrid bermudagrass (Cynodon dactylon (L) Pers. × C. transvaalensis Burtt-Davy) grown on a golf green built to the United States Golf Association recommendations in Barbados started to show irregular significant chlorotic patches followed by gradual thinning and decline of turfgrass. A survey was conducted in May 2016 to determine the presence of plant-parasitic nematodes. The results revealed the presence of the plant-parasitic sting nematode Belonolaimus longicaudatus. To our knowledge, this is the first report of B. longicaudatus associated with bermudagrass in Barbados.
- Published
- 2020
18. Incidence of Oscheius onirici (Nematoda: Rhabditidae), a potentially entomopathogenic nematode from the marshlands of Wisconsin, USA
- Author
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Shane Foye, Weimin Ye, Ann E. MacGuidwin, and Shawn A. Steffan
- Subjects
0106 biological sciences ,0301 basic medicine ,Dolichura-group ,animal structures ,Rhabditidae ,010607 zoology ,Zoology ,01 natural sciences ,Lepidoptera genitalia ,03 medical and health sciences ,Cranberry ,characterization ,DNA sequencing ,lcsh:QH301-705.5 ,molecular phylogeny ,Acrobasis vaccinii ,Pyralidae ,biology ,fungi ,Life Sciences ,Entomopathogenic nematode ,biology.organism_classification ,entomopathogenic nematode ,Sparganothis ,Galleria mellonella ,030104 developmental biology ,Nematode ,lcsh:Biology (General) - Abstract
In a search for an entomopathogenic nematode to control cranberry insect pests, three Oscheius populations (Rhabditidae) were recovered through the Galleria-bait method from one sample taken in a wild cranberry marsh in Jackson County, Wisconsin, USA. Morphological studies with light microscopy and scanning electron microscopy, as well as molecular analyses of the near-full-length small subunit rDNA gene, D2/D3 expansion segments of the large subunit rDNA gene, internal transcribed spacer, and mitochondrial cytochrome oxidase subunit 1 (CoxI) genes revealed this as Oscheius onirici, a species recently described from a karst cave soil of central Italy. The species belongs to the dolichura-group and is characterized by its DNA sequences; hermaphroditic reproduction; and males not found. A Bacillus-like bacterium appears to be associated with this nematode based on our microscopic and SEM observations; however its identity and persistent association with the nematode has not been confirmed. Nonetheless, this nematode is capable of infecting and killing the sparganothis fruitworm Sparganothis sulfureana Clemens (Lepidoptera: Tortricidae), the brown-banded cockroach Supella longipalpa Fabricius (Blattodea: Ectobiidae), and the cranberry fruitworm Acrobasis vaccinii Riley (Lepidoptera: Pyralidae), under laboratory conditions, and each in less than 72 hr. The mealworm Tenebrio molitor Linnaeus (Coleoptera: Tenebrionidae) and the greater wax moth Galleria mellonella Linnaeus (Lepidoptera: Pyralidae), are also susceptible, but take 3.5 and 5.2 days to die, respectively. This species is a new potential bio-control agent on insects.
- Published
- 2017
19. Xiphinema japonicum n. sp. (Nematoda: Longidorinae) from the Rhizosphere of Japanese Podocarpus macrophyllus (Thunb.), a Cryptic Species Related to Xiphinema bakeri Williams, 1961
- Author
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Majid Pedram, Lirong Zhao, Jianfeng Gu, Munawar Maria, and Weimin Ye
- Subjects
0106 biological sciences ,Morphometrics ,new species ,Species complex ,Rhizosphere ,Podocarpus macrophyllus ,biology ,morphometrics ,010607 zoology ,Life Sciences ,biology.organism_classification ,phylogeny ,010603 evolutionary biology ,01 natural sciences ,Xiphinema bakeri ,taxonomy ,Taxonomy and Systematics ,lcsh:Biology (General) ,Phylogenetics ,Xiphinema ,Botany ,morphology ,Taxonomy (biology) ,molecular ,lcsh:QH301-705.5 - Abstract
Xiphinema japonicum n. sp., isolated in Ningbo, China, from the rhizosphere of Podocarpus macrophyllus (Thunb.) imported from Japan is described. The new species belongs to Xiphinema non-americanum group 7 and is characterized by medium body length (3.0–3.7 mm), total stylet length 190–201 μm, vulva located anteriorly (V = 30.5%–35.3%), two equally developed female genital branches without uterine differentiation (no Z or pseudo-Z organ and/or spines in the uteri), short tail, convex-conoid with subdigitate peg in terminus, and absence of males. The species has four juvenile developmental stages (J1 was not found). The polytomous identification codes of the new species are (codes in parentheses are exceptions) A4-B4-C4-D5(4)-E2(3)-F3(4)-G2(3)-H2-I3-J4-K?-L1. Morphologically, the new species is mainly characterized by combination of the codes C4 and E2(3), making the species unique and different from other species in the genus. It is most similar to the North American species Xiphinema bakeri, herein considered as its cryptic species by the nature of high morphological similarity, but with significant differences in DNA sequences in nearly full length 18S, ITS1, 28S D2/D3, and cytochrome c oxidase subunit 1 sequences. The second morphologically close species is Xiphinema setariae from which the new species could be separated based on morphological and molecular characters. Morphological comparisons with phylogenetically related species are also discussed.
- Published
- 2017
20. Description of Xiphinema parachambersi sp. n. (Nematoda: Longidoridae) from Imported Ornamental Plants in Japan with a Key to Xiphinema Species in Group 1
- Author
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Weimin Ye, Jianfeng Gu, Qing Yu, and Munawar Maria
- Subjects
0106 biological sciences ,Morphometrics ,new species ,Euonymus hamiltonianus ,Phylogenetic tree ,biology ,morphometrics ,nematode ,010607 zoology ,Ovary (botany) ,Arts & Humanities ,Zoology ,Molecular ,biology.organism_classification ,01 natural sciences ,Nematode ,lcsh:Biology (General) ,Xiphinema ,morphology ,Key (lock) ,Longidoridae ,lcsh:QH301-705.5 ,010606 plant biology & botany - Abstract
Xiphinema parachambersi n. sp. recovered in Ningbo, China, from the rhizosphere of ornamental plants (Gardenia jasminoides and Euonymus hamiltonianus) imported from Japan is described. The new species is characterized by a long female body 1,830 to 2,109 μm long, odontostyle 105 to 116 μm long, reproductive system mono-opisthodelphic, vulva located anteriorly at 25.2 to 27.7% of total body, long ovary 119 to 292 μm with simple uterus and Z-organ absent, female tail elongated conoid with a rounded terminus. Only two juvenile stages were available to study and no male was found. The polytomous identification codes for this new species are A1, B4, C2, D23, E1, F2, G2, H2, I2, J2, K?, L1 and it belongs to the morphospecies group 1. Phylogenetic analysis based on the 18S, ITS1 and 28S D2/D3 sequences of the new species showed close relationships with X. chambersi. Morphologically, the new species is similar to X. chambersi, X. hangzhouense, and X. winotoi but can be differentiated by morphological characters and DNA sequences. To help identify the species, a diagnostic key to the group 1 species is presented.
- Published
- 2018
21. Molecular and morphological characterization of Paurodontella composticola n. sp. (Nematoda: Hexatylina, Sphaerulariidae) from Iran.
- Author
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Esmaeili, Mehrab, Heydari, Ramin, Kheiri, Ahmad, and Weimin Ye
- Subjects
INSECT anatomy ,BEETLE anatomy ,NEMATODES ,DIVERTICULUM ,OVIDUCT ,MOLECULAR phylogeny ,RECOMBINANT DNA - Abstract
A new species of the genus Paurodontella, P. composticola n. sp., collected from Nazar Abad City, Alborz Province, Iran, is described and illustrated. The new species has a body length of 803-1053 µ m (females n = 10) and 620 and 739 μ m (males n = 2). The cuticle is weakly annulated with four lateral lines. Cephalic region is annulated and continuous with body contour. The stylet is 8.0 to 9.0 µm long with asymmetrical knobs. Esophageal basal bulb is present with a small posterior extension projecting into the intestine. Excretory pore is situated at the level of esophageal basal bulb region. Post-uterine sac is 5 to 8 µm long and uterus is without diverticulum. Tails of both sexes are similar, short and sub-cylindrical. Males have 24 to 25 µm long bursa leptoderan and spicules 24 or 25 µm long. A non-branching oviduct is present to form a uterine diverticulum; the new species is closely related to five known species of the genus, namely P. asymmetrica, P. balochistanica, P. densa, P. iranica and P. niger. It most closely resembles P. iranica, but differs from it morphologically by a shorter stem-like extension projecting into lumen of intestine and male with sub-cylindrical tail vs conoid. In addition to morphological comparisons, the molecular phylogenetic analyses based on 733 bp of the partial sequence of 28S D2/D3 expansion segments of the large subunit rDNA gene (LSU) revealed this as a new species. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
22. Updated description of Paratylenchus lepidus Raski, 1975 and P. minor Sharma, Sharma and Khan, 1986 by integrating molecular and ultra-structural observations.
- Author
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Maria, Munawar, Wentao Miao, Weimin Ye, and Jingwu Zheng
- Subjects
ENGLISH ivy ,PINACEAE ,RED pine - Abstract
Two populations of Paratylenchus lepidus and P. minor were detected in the rhizosphere of Elaeocarpus sp. and Chinese red pine from Taizhou and Hangzhou, Zhejiang Province, China. Previously, P. lepidus has been reported from China whereas P. minor was originally described from India decades ago in the rhizosphere of peach but was never reported thereafter. In this study, both species were characterized morphologically and molecularly coupled with SEM observations. Morphologically, both species have four incisures in the lateral field, vulval present (SEM observations), stylet less than 30 µ m long and cephalic region without submedian lobes. Phylogenetically, both species grouped with paratylenchid species having short stylets. Both species can be differentiated from each other by the shape of lip region (rounded in P. lepidus and narrow truncated in P. minor) and tail terminus (pointed in P. lepidus and a broadly rounded in P. minor) and several morphomemtrical values.The study provided an updated description of P. lepidus and P. minor and a first record of P. minor from China. In addition, both species are the first paratylenchid species recorded from Elaeocarpus sp. and Pinus tabuliformis, respectively. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
23. Description of Gracilacus paralatescens n. sp. (Nematoda: Paratylenchinae) found from the rhizosphere of Bamboo in Zhejiang, China.
- Author
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Maria, Munawar, Ruihang Cai, Weimin Ye, Powers, Thomas O., and Jingwu Zheng
- Subjects
NEMATODE morphology ,NEMATODE phylogeny ,BAMBOO diseases & pests ,RHIZOSPHERE ,NUCLEOTIDE sequencing ,MORPHOMETRICS - Abstract
Gracilacus paralatescens n. sp., isolated in Anji County, Zhejiang Province, China from the rhizospheric soil of bamboo. The new species can be characterized by the female lateral field with three incisures, stylet 71.5 to 78.8 μm long, lip region truncated, excretory pore located anterior to basal knobs. Vulval lips non-protruding and without vulval flap, spermatheca large, elongated squarish shaped filled with sperms. Tail slender, relatively straight having wedge shape terminus. The spicule slender, slightly curved and 17.5 to 18.9 μm long. In the phylogenetic analysis based on 18S, D2-D3 of 28S and ITS regions of rDNA, the new species is clustered with Paratylenchid species having longer stylet length. Morphologically, the new species belongs to Group 9 of Paratylenchus sensu lato and is most similar to G. latescens. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
24. Description of Xiphinema parachambersi n. sp. (Nematoda: Longidoridae) from Imported Ornamental Plants in Japan with a Key to Xiphinema Species in Group 1.
- Author
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Maria, Munawar, Weimin Ye, Qing Yu, and Jianfeng Gu
- Subjects
- *
LONGIDORIDAE , *ORNAMENTAL plant diseases & pests , *DAGGER nematodes , *NEMATODE morphology , *NEMATODE phylogeny - Abstract
Xiphinema parachambersi n. sp. recovered in Ningbo, China, from the rhizosphere of ornamental plants (Gardenia jasminoides and Euonymus hamiltonianus) imported from Japan is described. The new species is characterized by a long female body 1,830 to 2,109 μm long, odontostyle 105 to 116 μm long, reproductive system monoopisthodelphic, vulva located anteriorly at 25.2 to 27.7% of total body, long ovary 119 to 292 μm with simple uterus and Z-organ absent, female tail elongated conoid with a rounded terminus. Only two juvenile stages were available to study and no male was found. The polytomous identification codes for this new species are A1, B4, C2, D23, E1, F2, G2, H2, I2, J2, K?, L1 and it belongs to the morphospecies group 1. Phylogenetic analysis based on the 18S, ITS1 and 28S D2/D3 sequences of the new species showed close relationships with X. chambersi. Morphologically, the new species is similar to X. chambersi, X. hangzhouense, and X. winotoi but can be differentiated by morphological characters and DNA sequences. To help identify the species, a diagnostic key to the group 1 species is presented. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
25. Diversity and Occurrence of Plant-parasitic Nematodes Associated with Golf Course Turfgrasses in North and South Carolina, USA
- Author
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Yongsan, Zeng, Weimin, Ye, S, Bruce Martin, Matt, Martin, and Lane, Tredway
- Subjects
Contributed Paper - Abstract
One hundred and eleven golf courses from 39 counties in the Carolinas were surveyed for plant-parasitic nematodes. Species diversity within habitats was analyzed with five diversity indices including Diversity index (H'), Evenness (J'), Richness (SR), Dominance (λ) and Diversity (H2 ). The results revealed a remarkably high diversity of 24 nematode species belonging to 19 genera and 11 families. Of those, 23 species were found in SC, 19 species in NC, and 18 species were detected in both states. Helicotylenchus dihystera, Mesocriconema xenoplax, Hoplolaimus galeatus, Tylenchorhynchus claytoni, Belonolaimus longicaudatus, Meloidogyne graminis and Paratrichodorus minor were the most prevalent and abundant species in golf course turfgrasses in both states. Twelve species were new records of plant parasitic nematodes in turfgrasses in both NC and SC. The results also revealed effects of different habitats on diversity of nematode species in turfgrass ecosystem. H' and SR values were higher in SC than in NC. H', J' and H2 values were significantly higher in sandy than in clay soil in NC, but no significant differences between sand and clay soil were detected in SC or in pooled data from both states. There were no significant differences for all indices among the management zones (putting green, fairway and tee) in NC. However, in SC and pooled data, H', SR and H2 were significantly higher in putting greens than in fairways and tees. Significant differences from different grass species (bermudagrass, creeping bentgrass and zoysiagrass) were detected only in H', which was significantly higher in zoysiagrass than in bentgrass or bermudagrass in NC. In pooled data, H' was significantly higher in zoysiagrass samples than in creeping bentgrass samples but was not significantly different from bermudagrass samples.
- Published
- 2012
26. Description of Hemicaloosia graminis n. sp. (Nematoda: Caloosiidae) Associated with Turfgrasses in North and South Carolina, USA
- Author
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Yongsan, Zeng, Weimin, Ye, Lane, Tredway, Samuel, Martin, and Matt, Martin
- Subjects
Contributed Paper - Abstract
A new nematode species was discovered during a diversity survey of plant-parasitic nematodes on turfgrass conducted in North and South Carolina in 2010 and 2011. It is described herein as Hemicaloosia graminis n. sp. and is characterized by two annuli in the lip region, one lateral line, body 610.0-805.0 μm long, stylet 65.0-74.6 μm long, vulva at 84.1% -85.8% of the body , 254-283 annuli, vulva at the 38-53(rd) annulus from tail terminus, 12-14 annuli between vulva and anus, tail elongate-pointed, 67.5-84.8 μm long in females and spicule straight, 31.0 μm long, caudal alae well developed, two lateral lines in males. The newly described species is morphologically closest to H. paradoxa, but has a longer stylet (65.0-74.6 vs 61.0-65.0 μm) and a higher V-value (84.1-85.8 vs 78.1-84.0%), less RV (38-53 vs 50-56), higher RVan (12-14 vs 10) in females, and a shorter tail (30.1 vs 36.7 μm) and more anteriorly located excretory pore (105.9 vs 140.0 μm) in the male. It was easily differentiated from other species based on near-full-length small subunit rRNA gene (SSU) and ITS1 sequences. Phylogenetic analysis from SSU supports placement in a monophyletic clade with the genus Caloosia. An identification key and a table of distinguishing characteristics are presented for all seven species of Hemicaloosia.
- Published
- 2012
27. Development of PrimeTime-Real-Time PCR for Species Identification of Soybean Cyst Nematode (Heterodera glycines Ichinohe, 1952) in North Carolina
- Author
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Weimin, Ye
- Subjects
endocrine system ,animal structures ,nervous system ,sense organs ,hormones, hormone substitutes, and hormone antagonists ,Contributed Paper - Abstract
Soybean cyst nematode (SCN) is an obligate, sedentary parasite that is a major pathogen of soybean and accounts for an estimated 1 billion dollars in production losses annually in the United States of America. This paper describes the development of a real-time PCR method for rapid, sensitive, species-specific and accurate identification of SCN alone or on mixed populations with other nematodes in North Carolina. The 83-bp DNA fragment of PrimeTime-real-time PCR was designed based on a 477-bp-SCN-SCAR marker previously proved to be SCN-specific. A total of 44 populations including cyst forming nematodes (Heterodera glycines, H. fici, H. schachtii, H. trifolii, Cactodera weissi, Globodera tabacum, Meloidodera floridensis and other unidentified cyst nematodes) and non-cyst forming nematodes (Ditylenchus dipsaci, Meloidogyne incognita and Xiphinema chambersi) were tested in this study, all SCN populations are tested positive and non-SCN populations negative. This assay for the detection and identification has been successfully applied for testing a single SCN cyst, a 2(nd)-stage-SCN juvenile, a single SCN egg, up to ten SCN cysts, a 10-fold dilution of a single 2(nd)-stage-SCN juvenile and 20-fold dilution of one SCN cyst. The assay is not SCN-race specific. It gave an accurate positive result when SCN is mixed with other cyst species. Also, nematode universal primers/probes for real-time PCR amplification as a nematode endogenous control to detect the presence of 18S ribosomal RNA (rRNA) gene were employed in this assay, so that a SCN-negative sample can be tested to exclude false negative. This method will be very useful for a broad range of research programs as well as the regulatory response and management of SCN in North Carolina and other region of the southeastern U.S.A.
- Published
- 2011
28. Morphological Observation on Longidorus crassus Thorne, 1974 (Nematoda: Longidoridae) and Its Intraspecies Variation
- Author
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Weimin, Ye and R T, Robbins
- Subjects
Taxonomy and Systematics - Abstract
Longidorus crassus is a common species and widely distributed in Arkansas. It was also identified for the first time in samples from Alabama, Iowa, Kansas, Nebraska, South Carolina, Wisconsin, and Canada. It is a parthenogenetic species, but a few males were found and were described herein for the first time. Four developmental juvenile stages were identified. A high degree of intraspecies variation was observed among different populations of this species. Twenty-three populations of L. crassus found in Arkansas were studied for their variability using standard measurements, mean comparison, and coefficient of variation. Most of the Arkansas populations have a smaller body than the paralectotypes. Populations Long-63 and Long-88 are close to the paralectotype population. Two populations, Long-10 and Long-80, are different from each other and all other populations. The majority of morphometric characters of this species do not have a normal distribution pattern as they have a high degree of variability within and between populations. The means of many morphometric characters strikingly differ between populations. Hierarchical cluster analysis based on female morphometric character means including body length, distance from vulva opening to anterior end, head width, odontostyle length, esophagus length, body width, tail length, and anal body width were used to examine the morphometric relationships and create dendrograms for 23 Arkansas populations and the lectotype population.
- Published
- 2009
29. Longidorus paravineacola n. sp. (Nematoda: Longidoridae), a New Species from Arkansas
- Author
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Weimin, Ye and R T, Robbins
- Subjects
Taxonomy and Phylogeny - Abstract
Longidorus paravineacola n. sp., described herein, was found in a survey of longidorids of Arkansas. It is a parthenogeneticspecies characterized by its long body (6.68-9.85 mm); slightly expanded and rounded head, head width 21-27 microm; odontostyle length 95-114 microm; guide ring 28-37 microm posterior to the head end; short rounded tail, and c' = 0.6-1.0. Longidorus paravineacola n. sp. is similar to the amphimictic species L. vineacola SturhanWeischer, 1964; L. balticus Brzeski, PenevaBrown, 2000; L. kuiperi Brinkman, LoofBarbez, 1987; and parthenogenetic species L. crassus Thorne, 1974, which also occurred in the type locality.
- Published
- 2009
30. Cluster analysis of longidorus species (nematoda: longidoridae), a new approach in species identification
- Author
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Weimin, Ye and R T, Robbins
- Subjects
Taxonomy and Systematics - Abstract
Hierarchical cluster analysis based on female morphometric character means including body length, distance from vulva opening to anterior end, head width, odontostyle length, esophagus length, body width, tail length, and tail width were used to examine the morphometric relationships and create dendrograms for (i) 62 populations belonging to 9 Longidorus species from Arkansas, (ii) 137 published Longidorus species, and (iii) 137 published Longidorus species plus 86 populations of 16 Longidorus species from Arkansas and various other locations by using JMP 4.02 software (SAS Institute, Cary, NC). Cluster analysis dendograms visually illustrated the grouping and morphometric relationships of the species and populations. It provided a computerized statistical approach to assist by helping to identify and distinguish species, by indicating morphometric relationships among species, and by assisting with new species diagnosis. The preliminary species identification can be accomplished by running cluster analysis for unknown species together with the data matrix of known published Longidorus species.
- Published
- 2009
31. Longidorus grandis n. sp. and L. paralongicaudatus n. sp. (Nematoda: Longidoridae), Two Parthenogenetic Species from Arkansas
- Author
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Weimin, Ye and R T, Robbins
- Subjects
Taxonomy and Phylogeny - Abstract
Two new parthenogenetic species of Longidorus were found in Arkansas. Longidorus grandis n. sp. is characterized by its body (5.80-8.24 mm), slightly offset head, head width 20-27 microm, odontostyle 86-100 microm, guide ring 26-35 microm posterior to the anterior end, short conoid to mammiliform tail. Longidorus grandis n. sp. is similar to L. vineacola SturhanWeischer, 1964; L. lusitanicus Macara, 1985; L. edmundsi HuntSiddiqi, 1977; L. kuiperi Brinkman, LoofBarbez, 1987; L. balticus Brzeski, PenevaBrown, 2000; L. closelongatus Stoyanov, 1964; and L. seinhorsti Peneva, LoofBrown, 1998. Longidorus paralongicaudatus n. sp. is characterized by its body length (2.60-5.00 microm), anteriorly flattened and offset head region 13-18 microm wide, odontostyle length 92-127 microm, guide ring 21-30 microm posterior to the anterior end, tail elongate-conical, and c' = 1.2-2.6. Longidorus paralongicaudatus n. sp. most closely resembles L. longicaudatus Siddiqi, 1962; L. socialis SinghKhan, 1996; L. juvenilis Dalmasso, 1969; and L. curvatus Khan, 1986.
- Published
- 2009
32. Phylogenetic Relationships and Genetic Variation in Longidorus and Xiphinema Species (Nematoda: Longidoridae) Using ITS1 Sequences of Nuclear Ribosomal DNA
- Author
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Weimin, Ye, Allen L, Szalanski, and R T, Robbins
- Subjects
Taxonomy - Abstract
Genetic analyses using DNA sequences of nuclear ribosomal DNA ITS1 were conducted to determine the extent of genetic variation within and among Longidorus and Xiphinema species. DNA sequences were obtained from samples collected from Arkansas, California and Australia as well as 4 Xiphinema DNA sequences from GenBank. The sequences of the ITS1 region including the 3' end of the 18S rDNA gene and the 5' end of the 5.8S rDNA gene ranged from 1020 bp to 1244 bp for the 9 Longidorus species, and from 870 bp to 1354 bp for the 7 Xiphinema species. Nucleotide frequencies were: A = 25.5%, C = 21.0%, G = 26.4%, and T = 27.1%. Genetic variation between the two genera had a maximum divergence of 38.6% between X. chambersi and L. crassus. Genetic variation among Xiphinema species ranged from 3.8% between X. diversicaudatum and X. bakeri to 29.9% between X. chambersi and X. italiae. Within Longidorus, genetic variation ranged from 8.9% between L. crassus and L. grandis to 32.4% between L. fragilis and L. diadecturus. Intraspecific genetic variation in X. americanum sensu lato ranged from 0.3% to 1.9%, while genetic variation in L. diadecturus had 0.8% and L. biformis ranged from 0.6% to 10.9%. Identical sequences were obtained between the two populations of L. grandis, and between the two populations of X. bakeri. Phylogenetic analyses based on the ITS1 DNA sequence data were conducted on each genus separately using both maximum parsimony and maximum likelihood analysis. Among the Longidorus taxa, 4 subgroups are supported: L. grandis, L. crassus, and L. elongatus are in one cluster; L. biformis and L. paralongicaudatus are in a second cluster; L. fragilis and L. breviannulatus are in a third cluster; and L. diadecturus is in a fourth cluster. Among the Xiphinema taxa, 3 subgroups are supported: X. americanum with X. chambersi, X. bakeri with X. diversicaudatum, and X. italiae and X. vuittenezi forming a sister group with X. index. The relationships observed in this study correspond to previous genera and species defined by morphology.
- Published
- 2009
33. Distribution and Morphology of Longidorus breviannulatus NortonHoffman, 1975 and Longidorus fragilis Thorne, 1974 (Nematoda: Longidoridae) from North America
- Author
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Weimin, Ye and R T, Robbins
- Subjects
Taxonomy and Systematics - Abstract
In a survey of ecotypes for longidorids, primarily from the rhizosphere hardwood trees growing in sandy soil along stream banks, 828 soil samples were collected from 37 Arkansas counties in 1999-2001. Eight populations of Longidorus breviannulatus were identified from the Arkansas survey samples. A total of 19 populations from California, Illinois, Iowa, Kansas, Michigan, Nebraska, New Jersey, New York, and Wisconsin were identified from the collection of the second author. A few males were found in New York and Nebraska populations and are described herein. Seven populations of L. fragilis were identified in the Arkansas survey samples, and one population was found from Indiana. Four juvenile stages of L. fragilis are present, and data are given for them herein.
- Published
- 2009
34. Stepwise and canonical discriminant analysis of longidorus species (nematoda: longidoridae) from arkansas
- Author
-
Weimin, Ye and R T, Robbins
- Subjects
Phylogeny and Genetics - Abstract
During a 1998-to-2001 survey from Arkansas, nine distinct species of Longidorus were found including five new species. Morphometrics of these nine species were used in a stepwise and canonical discrimination to select a subset of characteristics that best identified each species. Student's t test was applied to compare Longidorus breviannulatus Norton &Hoffman, 1975; L. crassus Thorne, 1974; L. diadecturus Eveleigh &Allen, 1982; L. fragilis Thorne, 1974; L. biformis Ye &Robbins, 2004; L. glycines Ye &Robbins, 2004; L. grandis Ye &Robbins, 2003; L. paralongicaudatus Ye &Robbins, 2003; and L. paravineacola Ye &Robbins, 2003 to examine interspecies variation and test for the most useful morphometric characters in species discrimination. Most of the morphometric characters were useful to differentiate species, but species identification could not be based on a single character because the morphometric character ranges often overlap. Stepwise discriminant analysis indicated that the guide ring position, head width, tail length, body length, odontostyle length, and anal body width were the most important variables. These were used to generate canonical variables in discriminating the species. The first three canonical variables accounted for 95% of the total variance. The scatterplots by the first three canonical variables grouped and separated the Longidorus species from Arkansas. Stepwise and canonical discriminant analyses were useful for examining the groupings and morphometric relationships of the nine Longidorus species.
- Published
- 2009
35. Longidorus biformis n. sp. and L. glycines n. sp. (Nematoda: Longidoridae): Two Amphimictic Species from Arkansas
- Author
-
Weimin, Ye and R T, Robbins
- Subjects
Taxonomy - Abstract
Two new amphimictic species of Longidorus were found in Arkansas. Longidorus biformis n. sp., found in the rhizosphere of hardwood trees along streams in sandy soil in 14 Arkansas locations, is characterized by its long body (5.42-9.50 mm), wide expanded flattened head end, head width 20.0 to 26.0 microm, odontostyle 96 to 125 microm, guide ring 29 to 38 microm posterior to the anterior end, elongate conoid tail, and c' = 0.9-2.1. Females with 2 to 11 vetromedian supplement-like structures were found in 2 of 14 populations of this new species. Longidorus biformis n. sp. is closest to L. seinhorsti Peneva, LoofBrown, 1998 and L. closelongatus Stoyanov, 1964. Among North American species it is closest to L. glycines n. sp. A distinguishing feature of L. biformis n. sp. is the presence of supplement-like organs in some females. Longidorus glycines n. sp., found in soybean microplots at the Main Research Station, Fayetteville, Arkansas, is characterized by its long body (6.14-8.31 mm), wide offset flattened head end, head width 20.3 to 23.3 microm, odontostyle 87.3 to 99.5 microm, guide ring 22.3 to 26.4 microm posterior to the anterior end, short conoid tail with rounded terminus, and c' = 0.9-1.4. Longidorus glycines n. sp. is closest to L. lusitanicus Macara, 1985. Among North American species it is close to L. biformis n. sp., L. breviannulatus Norton and Hoffman, 1975, and L. crassus Thorne, 1964. Both new species are believed to have four juvenile stages; the first stage was not found for L. biformis n. sp.
- Published
- 2009
36. Xiphinema bernardi n. sp. (Nematoda: Longidoridae) from the Great Smoky Mountain National Park
- Author
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R T, Robbins, Chang-Hwan, Bae, Weimin, Ye, and Majid, Pedram
- Subjects
Contributed Paper - Abstract
In October 1985 during a survey of fauna of the Great Smoky Mountains National Park, Ernest Bernard recovered a limited number of specimens of a non-described species of Xiphinema (Nematoda: Longidoridae) and sent them to the senior author. The species is distinct from other species by its large size and having Z-organs in the genital tract. During July 2006, Dr. Bernard's survey crew took samples in the area where the species was first found and was successful in finding it again. Without Dr. Bernard's efforts, this species could not have been described and thus the new species is named X. bernardi n. sp. in his honor. Several female and juvenile specimens of the new species were recovered in a sample from a mixed forest of maple, hemlock, and silverbell. It is distinct from all others in Xiphinema group 4 species (with Z-organs) by having a longer total stylet length, 259.8 to 284.2 μm vs < 253 μm for all other species in this group. Xiphinema bernardi n. sp. is distinctive because of its long body length (4.45 to 6.00 mm), tail shape, and c' ratio. Of the group 4 species, it most closely resembles X. phoenicis. Second, third and fourth stage juvenile descriptions and morphometrics are included. The polytomous key code for X. bernardi n. sp. is A4-B1-C6-D56-E56-F(4)5-G4-H2-I34-J5-K?-L1. Molecular approaches using the internal transcribed spacer 1 sequences of nuclear ribosomal DNA suggested that X. bakeri and X. diversicaudatum are the most closely related species from the species examined.
- Published
- 2009
37. Morphology and Description of Bursaphelenchus platzeri n. sp. (Nematoda: Parasitaphelenchidae), an Associate of Nitidulid Beetles
- Author
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Robin M, Giblin-Davis, Natsumi, Kanzaki, Weimin, Ye, Manuel, Mundo-Ocampo, James G, Baldwin, and W Kelley, Thomas
- Subjects
fungi ,Contributed Paper - Abstract
Bursaphelenchus platzeri n. sp., an associate of nitidulid beetles in southern California, is described and illustrated. Adult males and females of B. platzeri n. sp. were examined by scanning electron microscopy for ultrastructural comparisons with other members of the genus. Bursaphelenchus cocophilus (red ring nematode) appears to be the closest related taxon to B. platzeri n. sp. based upon shared morphological features of the fused spicules, female tail shape, phoresy with non-scolytid beetles, and molecular analysis of the near full-length small subunit (SSU) rDNA. Unfortunately, sequence data from the D2D3 expansion segments of the large subunit (LSU) rDNA and partial mitochondrial DNA COI did not help resolve the relationship of nearest relative. In addition to significant molecular sequence differences in SSU, LSU, and COI, B. platzeri n. sp., which is an obligate fungal feeder, can be differentiated from B. cocophilus because it is an obligate parasite of palms. Bursaphelenchus platzeri n. sp. can be differentiated from all other species of Bursaphelenchus by the length and shape of the female tail and spicule morphology. The spicules are fused along the ventral midline and possess unfused cucullae; the fused unit appears to function as a conduit for sperm. Population growth of B. platzeri n. sp. was measured in a time-course experiment at 25 degrees C in the laboratory on cultures of the fungus Monilinia fructicola grown on 5% glycerol-supplemented potato dextrose agar (GPDA). Nematode population densities rapidly increased from 25 to approximately 200,000/culture within 14 d and then plateaued for up to 28 d.
- Published
- 2005
38. Stomatal Ultrastructure, Molecular Phylogeny, and Description of Parasitodiplogaster laevigata n. sp. (Nematoda: Diplogastridae), a Parasite of Fig Wasps
- Author
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Robin M, Giblin-Davis, Weimin, Ye, Natsumi, Kanzaki, Donna, Williams, Krystalynne, Morris, and W Kelley, Thomas
- Subjects
Contributed Paper - Abstract
Parasitodiplogaster comprises a potentially large radiation of nematode species that appear to be parasitically bound to their Agaonid fig wasp hosts, which are mutualistically associated in the syconia (figs) of the diverse plant genus Ficus. Parasitodiplogaster laevigata n. sp. is described and illustrated as an associate of the fig wasp, Pegoscapus sp. from Ficus laevigata from southern Florida. It is the first species of Parasitodiplogaster reported from North America and is closest to P. trigonema from F. trigonata from Panama. Parasitodiplogaster laevigata n. sp. can be differentiated from all described species of Parasitodiplogaster based on stomatal morphology (presence of a large dorsal and a right subventral tooth) in the adults of both sexes, molecular comparisons of two expansion segments (D2,D3) of the large subunit (LSU) rRNAgene, and fig-fig wasp host affinities. The ultrastructure of P. laevigata n. sp. was elucidated using TEM and SEM for comparisons with other species of Parasitodiplogaster. The stoma of P. laevigata n. sp. possesses a nonsegmented cheilostomal ring that connects to the longitudinal body musculature per- and interradially, a claw-like dorsal tooth, a right subventral tooth, and telostegostomatal apodemes arising from the dorsal side of each subventral sector. The unification of the pro-, meso-, and metastegostom with the gymnostom in P. laevigata n. sp. and further simplification in other described species may be due to derived adaptations associated with the internal parasitism of fig wasps.
- Published
- 2005
39. First report of Meloidogyne javanica on Ginger and Turmeric in the United States.
- Author
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Hajihassani, Abolfazl, Weimin Ye, and Hampton, Brooke B.
- Subjects
- *
JAVANESE root-knot nematode , *ROOT-knot nematodes , *TURMERIC , *GINGER , *NEMATODE infections , *CYTOCHROME oxidase , *MITOCHONDRIAL DNA - Abstract
Ginger ( Zingiber officinale L.) and turmeric ( Curcuma longa L.) are two her baceous perennial plant species with rhizomes that are commonly used for flavoring or medicinal purposes. In January 2018, stunting and poorly developed root systems typically associated with plant-parasitic nematode infection were observed on organically grown edible ginger and turmeric in a hoop house in Wheeler County, Georgia. Examination of soil and root samples from symptomatic plants revealed the presence of high populations of root-knot nematodes ( Meloidogyne spp.). The second-stage juveniles (J2s) were extracted from soil samples as described by Jenkins (1964). Nematode counts were 285 and 155 J2s per 100 cm3 soil in the areas planted with ginger and turmeric, respectively. Nematode eggs were recovered from infected root systems using the bleach (1%) and blending method (Hussey and Barker, 1973). Examination of the root samples showed the presence of 840 and 320 eggs per g of roots in ginger and turmeric, respectively. Primary diagnosis of the Meloidogyne specimens was done by comparing morphological features observed in the J2s (n = 10) and perineal pattern of females (n = 11) based on the description given by Eisenback and Triantaphyllou (1991) and were tentatively identified as M. javanica (Treub, 1885; Chitwood, 1949). For species identification, DNA sequencing was performed using multiple markers located in 18S ribosomal RNA and 5.8S internal transcribed spacer 1 regions, (18S + ITS) (GenBank Accession No. MK390613), 28S domain 2 and 3 (28S D2/D3) (MK385596), cytochrome oxidase subunit I (COI) (MK391558), and subunit II and 16S (COII + 16S) (MK391557) of mitochondrial DNA following methods as described in Ye et al. (2015). PCR assays by species-specific primers were also conducted to confirm species identity as described by Zijlstra et al. (2000). [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
40. Paurodontella parapitica n. sp. (Nematoda: Hexatylina, Sphaerularioidea) from Kermanshah Province, Western Iran.
- Author
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ESMAEILI, MEHRAB, HEYDARI, RAMIN, and WEIMIN YE
- Subjects
PLANT morphology ,PLANT size ,RHIZOSPHERE ,PLANT roots ,RHIZOSPHERE microbiology - Abstract
Paurodontella parapitica n. sp., collected from the rhizosphere of an apple tree in Kermanshah province, western Iran, is described. The new species is characterized by a body length of 505 to 723 µm (females) and 480 to 600 µm (males), lip region continuous by depression; 7 to 8 mm broad, 3 to 4 µm high, stylet length 7 to 9 µm or 1 to 1.3 times the lip region diameter, short postuterine sac of 4 to 6 µm long, lateral fields with five to six incisures; outer incisures crenated and inner incisures weakly crenated, excretory pore situated 90 to 100 µm from anterior end; functional males common in the population, with spicules 24 to 26 µm long. Tail of both sexes similar, almost straight and elongate-conoid. The new species resembles in morphology and morphometrics to four known species of the genus, namely P. apitica, P. minuta, P. myceliophaga, and P. sohailai. The results of phylogenetic analyses based on sequences of D2/D3 expansion region of 28S rRNA gene revealed this genus is polyphyletic in four different clades in Tylenchid. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
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