5 results on '"Zhen-ming Lu"'
Search Results
2. Corrigendum
- Author
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Li-Juan, Chai, Guan-Yu, Fang, Peng-Xiang, Xu, Xiao-Juan, Zhang, Zhen-Ming, Lu, Su-Yi, Zhang, Song-Tao, Wang, Cai-Hong, Shen, Jin-Song, Shi, and Zheng-Hong, Xu
- Published
- 2021
3. Blautia liquoris sp. nov., isolated from the mud in a fermentation cellar used for the production of Chinese strong-flavour liquor
- Author
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Chai Lijuan, Yang Yang, Zhen-Ming Lu, Zhenghong Xu, Ping Yang, Cai-Hong Shen, Li-Qiang Zhang, Ling-Fei Lu, and Hui Qin
- Subjects
Arabinose ,Strain (chemistry) ,General Medicine ,Maltose ,Biology ,16S ribosomal RNA ,biology.organism_classification ,Microbiology ,chemistry.chemical_compound ,Acetic acid ,chemistry ,Fermentation ,Food science ,Raffinose ,Ecology, Evolution, Behavior and Systematics ,Bacteria - Abstract
A novel Gram-positive, non-motile, non-flagellated, strictly anaerobic, non-spore-forming and dumbbell-shaped, coccoid- or chain-shaped bacterium, designated strain LZLJ-3T, was isolated from a mud fermentation cellar which has been used for the production of Chinese strong-flavour liquor for over 100 years. Strain LZLJ-3T grew at 20–40 °C (optimum, 37 °C), at pH 6.0–8.0 (optimum, pH 8.0) and with NaCl concentrations up to 1 % (w/v; optimum, 0 %). Phylogenetic trees established based on 16S rRNA gene sequences showed that strain LZLJ-3T belonged to the genus Blautia of the family Lachnospiraceae, with the highest sequence similarity to Blautia stercoris GAM6-1T (91.7 %) and Blautia faecicola KGMB01111T (91.7 %). Comparative genome analysis showed that the orthologous average nucleotide identity (OrthoANI) and genome-to-genome distance (GGD) values between strain LZLJ-3T and B. stercoris GAM6-1T were respectively 69.1 and 22.9 %; the OrthoANI and GGD values between strain LZLJ-3T and B. faecicola KGMB01111T were respectively 70.86 and 36 % . The DNA G+C content of strain LZLJ-3T genome was 42.1 mol%. The predominant celluar fatty acids (>10 %) of strain LZLJ-3T were C16 : 0 FAME (27.9 %), C14 : 0 FAME (17.6 %) and C16 : 0 DMA (13.0 %). Arabinose, glucose and maltose could be utilized by strain LZLJ-3T as sole carbon sources for growth, with weak utilization of raffinose and l-fucose. API ZYM analysis gave positive reactions with α-galactosidase, β-galactosidase, α-glucosidase and β-glucosidase. The major end product of glucose fermentation was acetic acid. Based on the results of phenotypic, genotypic and phylogenetic analyses, strain LZLJ-3T is considered to represent a novel species of Blautia , for which the name Blautia liquoris sp. nov. is proposed. The type strain is LZLJ-3T (=KCTC 25163T=CGMCC 1.5299T=JCM 34225T).
- Published
- 2021
- Full Text
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4. Novisyntrophococcus fermenticellae gen. nov., sp. nov., isolated from an anaerobic fermentation cellar of Chinese strong-flavour baijiu
- Author
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Zhen-Ming Lu, Zhenghong Xu, Peng-Xiang Xu, Wang Songtao, Xiaojuan Zhang, Cai-Hong Shen, Chai Lijuan, Su-Yi Zhang, Fang Guanyu, and Jin-Song Shi
- Subjects
Strain (chemistry) ,Lachnospiraceae ,General Medicine ,Biology ,16S ribosomal RNA ,biology.organism_classification ,Microbiology ,Acetic acid ,chemistry.chemical_compound ,Syntrophococcus sucromutans ,chemistry ,Fermentation ,Food science ,Genome size ,Ecology, Evolution, Behavior and Systematics ,Bacteria - Abstract
A Gram-stain-negative, coccus-shaped, obligately anaerobic, non-motile and non-spore-forming bacterium, designated strain JN500902T, was isolated from the mud in a fermentation cellar used continuously over 30 years for Chinese strong-flavour baijiu production. Colonies were white, circular, convex and smooth-edged. Growth was observed at 20–40 °C (optimum, 37 °C), at pH 5.0–10 (optimum, pH 7.5), with 0–2 % (w/v) NaCl and with 0–4 % (v/v) ethanol. The Biolog assay demonstrated positive reactions of strain JN500902T in the metabolism of l-fucose and pyruvate. The predominant cellular fatty acids (>10 %) consisted of C16 : 0 and C14 : 0. The major end metabolites of strain JN500902T were acetic acid and ethanol when incubated anaerobically in liquid reinforced clostridial medium. Acetate was the major organic acid end product. The complete genome size of strain JN500902T was 3 420 321 bp with 3327 identified genes. The G+C content was 43.5 mol%. Phylogenetic analysis based on 16S rRNA gene sequences affiliated strain JN500902T with the family Lachnospiraceae , having low sequence similarity (92.8 %) to the nearest type strain, Syntrophococcus sucromutans DSM 3224T and forming a clearly distinct branch. Core genome phylogenetic analysis of the isolate and 134 strains belonging to the family Lachnospiraceae also revealed that strain JN500902T was well-separated from other genera of this family as a monophyletic clade. The average nucleotide identity and amino acid identity values between strain JN500902T and 134 Lachnospiraceae strains were less than 74 and 65 %, respectively. Considering its polyphasic characteristics, strain JN500902T represents a novel genus and species within the family Lachnospiraceae , for which the name Novisyntrophococcus fermenticellae gen. nov., sp. nov. is proposed. The type strain is JN500902T (=CICC 24502T=JCM 33939T).
- Published
- 2021
- Full Text
- View/download PDF
5. Clostridium fermenticellae sp. nov., isolated from the mud in a fermentation cellar for the production of the Chinese liquor, baijiu
- Author
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Cai-Hong Shen, Jin-Song Shi, Zhen-Ming Lu, Wang Songtao, Chen Xiao, Chai Lijuan, Zhenghong Xu, Ting Qiu, Xiaojuan Zhang, and Peng-Xiang Xu
- Subjects
0106 biological sciences ,0301 basic medicine ,DNA, Bacterial ,China ,Metabolite ,Biology ,010603 evolutionary biology ,01 natural sciences ,Microbiology ,03 medical and health sciences ,chemistry.chemical_compound ,Isomaltulose ,Clostridium ,RNA, Ribosomal, 16S ,Food science ,Gene ,Ecology, Evolution, Behavior and Systematics ,Phylogeny ,Soil Microbiology ,Base Composition ,Strain (chemistry) ,Ethanol ,Alcoholic Beverages ,Fatty Acids ,General Medicine ,Sequence Analysis, DNA ,16S ribosomal RNA ,biology.organism_classification ,Bacterial Typing Techniques ,030104 developmental biology ,chemistry ,Fermentation ,Bacteria - Abstract
A novel Gram-stain-positive, rod-shaped, obligately anaerobic, non-motile, spore-forming and binary fission encapsulated bacterium, designated strain JN500901T, was isolated from a mud cellar which has been continuously used for the fermentation of Chinese strong-flavour baijiu for over 100 years. Growth of JN500901Toccurred at pH 4.5–8.0 (optimum, pH 5.0), 20–40 °C (37 °C), 0–2 % (w/v) NaCl and 0–10 % (v/v) ethanol. The Biolog assay revealed that strain JN500901T metabolized d-fructose, l-fucose, isomaltulose and l-rhamnose among the 95 studied carbon sources. p-Cresol was the predominant volatile metabolite in the fermentation broth of strain JN500901T incubated in liquid reinforced clostridial medium under anaerobic conditions. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain JN500901T belongs to Clostridium sensu stricto, and shared the highest sequence similarity to Clostridium carboxidivorans DSM 15243T (94.2 %), followed by Clostridium scatologenes DSM 757T (94.1 %). The dominant cellular fatty acids (>10 %) were C16 : 0 FAME (36.6 %), C19 : 0 cyc 9,10 DMA (19.8 %) and C16 : 1 cis 9 DMA (11.8 %). The complete genome of strain JN500901T contained a circular chromosome of 2.812 Mb with 2611 genes and 31.0 mol% G+C content. Comparative genome analysis of the strain JN500901T, Clostridium carboxidivorans DSM 15243T and Clostridium scatologenes DSM 757T revealed 74.5 and 74.8 % average nucleotide identity, respectively. Based on the phenotypic, biochemical and phylogenetic analyses presented here, strain JN500901T is considered to be a novel species of the genus Clostridium sensustricto, for which the name Clostridium fermenticellae sp. nov. is proposed. The type strain is JN500901T (=CICC 24501T=JCM 32827T).
- Published
- 2019
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