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Creating new multimodal infrastructure in an existing transport network of an urban city is a challenging process. The responsible transport authorities have to pay special attention to the details regarding the accessibility and effectiveness of the new development, to avoid travelers’ confusion and network congestion. The subject of this paper is the assessment and optimization of the traffic network in the surroundings of the new multimodal depot of Thessaloniki’s future metro system with the use of the microsimulation software PTV VISSIM (version 2022). Five different scenarios were developed in collaboration with the city’s transport authority and evaluated into two stages, beginning with the whole traffic network, and then continuing with the analyzed intersections separately. The evaluation is based on Key Performance Indicators (KPIs), which were extracted by the software. According to the results of the base case scenario, the network functions satisfactorily, with slight delays. Regarding the future network, the operation of the new hub will strongly increase the traffic demand, while the proposed traffic network adjustments by the local authorities seem to cause significant delay problems. This paper aims to highlight the importance of using modeling tools during the design phase of a new infrastructure to create efficient, accessible, and sustainable infrastructures that enhance the public transport system.