10 results on '"Joshua A. Mott"'
Search Results
2. The role of non‐pharmaceutical interventions on influenza circulation during the COVID‐19 pandemic in nine tropical Asian countries
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Joshua A. Mott, Sonja J. Olsen, and William W. Davis
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Pulmonary and Respiratory Medicine ,History ,Polymers and Plastics ,Coronavirus disease 2019 (COVID-19) ,SARS-CoV-2 ,Epidemiology ,Psychological intervention ,Public Health, Environmental and Occupational Health ,COVID-19 ,Industrial and Manufacturing Engineering ,Seasonal influenza ,Geography ,Infectious Diseases ,Environmental health ,Pandemic ,Influenza, Human ,Asian country ,Humans ,Circulation (currency) ,Seasons ,Business and International Management ,Pandemics - Abstract
Low global influenza circulation was reported during the coronavirus-19 pandemic. We explored relationships between non-pharmaceutical interventions (NPIs) and influenza in tropical Asian countries.Using World Health Organization (WHO) surveillance data from 2015 to 2019 and the WHO shiny app, we constructed expected seasonal influenza epidemic curves from March 2020 to June 2021 and compared the timing, and average percent positivity with observed data. We used multivariate regression to test associations between ordinal NPI data (from the Oxford Stringency Index) 4 weeks before the expected 2020/21 epidemics and present adjusted incidence rate ratio (IRR) or relative proportion ratio (RPR) and 95% confidence intervals (CI).Data from nine countries predicted 18 seasonal epidemics; seven were observed. Five started 6-24 weeks later, and all were 4-21 weeks shorter than expected. Five epidemics had lower maximum peak values (percent positivity), and all but one had lower average percent positivity than expected. All countries implemented NPIs. Each increased level of school closure reduced risk of an epidemic by 43% (IRR = 0.57, CI: 0.34, 0.95). Each increased level of canceling public events reduced the average percent positivity across the season by 44% (RPR = 0.56, CI: 0.39, 0.82) and each increased level in restricting internal movements reduced it by 41% (RPR = 0.59, CI: 0.36, 0.96). Other NPIs were not associated with changes.Among nine countries, the 2020/21 seasonal epidemics were delayed, shorter, and less intense than expected. Although layered NPIs were difficult to tease apart, school closings, canceling public events, and restricting internal movements before influenza circulation seemed to reduce transmission.
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- 2022
3. Re‐emergence of influenza virus circulation during 2020 in parts of tropical Asia: Implications for other countries
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Sonja J. Olsen, Joshua A. Mott, David E. Wentworth, Rebecca Garten, and Alicia M. Fry
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Pulmonary and Respiratory Medicine ,2019-20 coronavirus outbreak ,Asia ,Coronavirus disease 2019 (COVID-19) ,Epidemiology ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,sentinel surveillance ,Context (language use) ,Influenza season ,medicine.disease_cause ,Virus ,Influenza, Human ,Tropical climate ,Asian country ,Influenza A virus ,medicine ,Humans ,H3N2 subtype ,Circulation (currency) ,Letters to the Editor ,Letter to the Editor ,tropical climate ,business.industry ,Influenza A Virus, H3N2 Subtype ,Viet nam ,Public Health, Environmental and Occupational Health ,virus diseases ,Virology ,Infectious Diseases ,Current season ,business ,Tropical Asia ,Demography ,Southeastern Asia - Abstract
Global influenza virus circulation declined and has been below traditional seasonal levels during the COVID-19 pandemic.1-3 We reviewed WHO influenza surveillance outputs from May 1-December 31, 2020 (epidemiologic weeks 18-53) from tropical Asian countries. For each country we report influenza surveillance specimens tested, and the percentage positive for influenza, by type and subtype. We compared current data to historical data from 2015-2019 in order to place the current season in historical context. Twelve included countries tested 17,407 surveillance specimens, with 592 (3.4%) testing positive for influenza viruses. From April 27-July 26, 2020 (epidemiologic weeks 18-30), specimens tested decreased from an average of 14,102 per year in 2015-2019 to 3,969 (71.9% decrease) and influenza positivity from 22% to 90% of weeks, influenza circulation was unseasonably low, or absent, during weeks 18-30, 2020. However, during weeks 31-53, the percentage of surveillance specimens testing positive for influenza approached or reached positivity rates of 2015-2019 in Bangladesh and Cambodia; and increased but remained lower than historical positivity in Lao PDR and Viet Nam. The data presented here are a reminder that the low levels of influenza circulation in the northern hemisphere in summer 2020 may not necessarily persist into the upcoming influenza season, and influenza surveillance and prevention strategies should continue as planned and not be delayed.
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- 2021
4. First human infection of avian influenza A(H5N6) virus reported in Lao People's Democratic Republic, February-March 2021
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Joyce Jones, Phouvong Phommachanh, Pakapak Ketmayoon, Yunho Jang, Joshua A. Mott, Virasack Somoulay, Reiko Tsuyuoka, Charles T. Davis, Sonja J. Olsen, John R. Barnes, Bounthanom Sengkeopraseuth, Kim Carmela Co, May Chiew, Phonepadith Xangsayyarath, Elizabeth Pusch, Phetdavanh Leuangvilay, Bouaphanh Khamphaphongphane, and Boungnasith Khomgsamphanh
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Pulmonary and Respiratory Medicine ,China ,Epidemiology ,viruses ,LAO PEOPLE'S DEMOCRATIC REPUBLIC ,medicine.disease_cause ,Virus ,Poultry ,Influenza, Human ,Global health ,medicine ,Influenza A virus ,Animals ,Humans ,Clade ,Phylogeny ,Public Health, Environmental and Occupational Health ,Virology ,Influenza A virus subtype H5N1 ,Infectious Diseases ,Geography ,Ducks ,Laos ,Child, Preschool ,Influenza in Birds ,Chickens ,Contact tracing - Abstract
In March 2021, Lao People's Democratic Republic (Laos) reported an avian influenza A(H5N6) virus infection in a 5-year-old child identified through sentinel surveillance. This was the first human A(H5N6) infection reported outside of China. A multidisciplinary investigation undertook contact tracing and enhanced human and animal surveillance in surrounding villages and live bird markets. Seven Muscovy ducks tested positive for highly pathogenic avian influenza A(H5N6) viruses. Sequenced viruses belonged to clade 2.3.4.4h and were closely related to viruses detected in poultry in Vietnam and to previous viruses detected in Laos. Surveillance and coordinated outbreak response remain essential to global health security.
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- 2021
5. Effect of acute respiratory illness on short‐term frailty status of older adults in Nakhon Phanom, Thailand—June 2015 to June 2016: A prospective matched cohort study
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Fatimah S. Dawood, Prabda Praphasiri, Darunee Ditsungnoen, Kanlaya Sornwong, Michelle M Hughes, Kriengkrai Prasert, and Joshua A. Mott
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Male ,Pulmonary and Respiratory Medicine ,Pediatrics ,medicine.medical_specialty ,Epidemiology ,Frail Elderly ,Severe disease ,030312 virology ,03 medical and health sciences ,Matched cohort ,respiratory infection ,medicine ,Humans ,Longitudinal Studies ,Prospective Studies ,Longitudinal cohort ,Respiratory Tract Infections ,older adults ,Aged ,Aged, 80 and over ,0303 health sciences ,Respiratory illness ,Frailty ,business.industry ,Significant difference ,Age Factors ,Public Health, Environmental and Occupational Health ,Respiratory infection ,Original Articles ,Thailand ,respiratory tract diseases ,3. Good health ,Infectious Diseases ,Cohort ,Original Article ,Female ,influenza ,business ,Cohort study - Abstract
Background Frailty is associated with increased risk of mortality and decline in functional status among older adults. Older adults are at increased risk of severe disease from acute respiratory illness (ARIs), but ARI effects on frailty status among older adults are not well understood. We evaluated how ARIs affect short-term frailty status among community-dwelling adults aged ≥65 years in Nakhon Phanom, Thailand. Methods During May 2015 to May 2017, older adults were contacted weekly to identify ARIs as part of a community-based longitudinal cohort study. Each participant's frailty status was assessed at baseline and every 6 months using the Vulnerable Elders Survey-13 (VES-13). We selected cohort participants with an ARI and compared them with a sample of participants without an ARI matched on age, sex, influenza vaccination status, and most recent VES-13 score. For these matched cohort members, an additional VES-13 was recorded at 3-4 weeks after the ARI episode date. Results Of 3220 cohort study participants, 114 participants with an ARI and 111 comparison participants without an ARI were selected for the matched cohort; three comparison participants were matched to two ARI cases. We found no statistically significant difference between ARI and non-ARI participants in modified VES-13 score 3-4 weeks post-episode (cases = 0.90, controls = 0.63, P = 0.07). Only two ARI episodes required hospitalization. Conclusions Primarily mild ARIs did not affect short-term frailty status among community-dwelling older adults in Thailand. As few cases of severe ARI were detected, the contribution of severe ARI to changes in frailty requires further investigation.
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- 2019
6. Comparison of severe acute respiratory illness (sari) and clinical pneumonia case definitions for the detection of influenza virus infections among hospitalized patients, western Kenya, 2009‐2013
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Nancy A. Otieno, Henry Njuguna, Caroline Makokha, Joshua A. Mott, Sammy Khagayi, Mark A. Katz, Jennifer R. Verani, and Bryan O. Nyawanda
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0301 basic medicine ,Pulmonary and Respiratory Medicine ,Adult ,Male ,Pediatrics ,medicine.medical_specialty ,Adolescent ,Epidemiology ,Hospitalized patients ,030106 microbiology ,030231 tropical medicine ,Orthomyxoviridae ,Virus ,03 medical and health sciences ,Young Adult ,0302 clinical medicine ,Short Article ,Influenza, Human ,Medicine ,Humans ,In patient ,Young adult ,Child ,Respiratory Tract Infections ,Aged ,Respiratory illness ,biology ,Respiratory tract infections ,business.industry ,Public Health, Environmental and Occupational Health ,Infant ,Pneumonia ,Middle Aged ,biology.organism_classification ,medicine.disease ,Kenya ,respiratory tract diseases ,Hospitalization ,Infectious Diseases ,Child, Preschool ,Female ,business ,Sentinel Surveillance - Abstract
Although the severe acute respiratory illness (SARI) case definition is increasingly used for inpatient influenza surveillance, pneumonia is a more familiar term to clinicians and policymakers. We evaluated WHO case definitions for severe acute respiratory illness (SARI) and pneumonia (Integrated Management of Childhood Illnesses (IMCI) for children aged
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- 2016
7. Influenza surveillance in Europe: establishing epidemic thresholds by the Moving Epidemic Method
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Raúl Ortiz de Lejarazu, Baltazar Nunes, José E. Lozano, T J Meerhoff, René Snacken, Joshua A. Mott, and Tomás Vega
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Pulmonary and Respiratory Medicine ,medicine.medical_specialty ,Time Factors ,Epidemiology ,Influenza epidemics ,Sensitivity and Specificity ,Modelling ,modelling ,Environmental health ,Influenza, Human ,medicine ,Humans ,Surveillance ,business.industry ,Public Health, Environmental and Occupational Health ,Original Articles ,Virology ,Influenza ,Europe ,Infectious Diseases ,Epidemiological Monitoring ,surveillance ,Original Article ,Determinantes da Saúde e da Doença ,business ,influenza - Abstract
Please cite this paper as: Vega et al. (2012) Influenza surveillance in Europe: establishing epidemic thresholds by the moving epidemic method. Influenza and Other Respiratory Viruses 7(4), 546–558. Background Timely influenza surveillance is important to monitor influenza epidemics. Objectives (i) To calculate the epidemic threshold for influenza-like illness (ILI) and acute respiratory infections (ARI) in 19 countries, as well as the thresholds for different levels of intensity. (ii) To evaluate the performance of these thresholds. Methods The moving epidemic method (MEM) has been developed to determine the baseline influenza activity and an epidemic threshold. False alerts, detection lags and timeliness of the detection of epidemics were calculated. The performance was evaluated using a cross-validation procedure. Results The overall sensitivity of the MEM threshold was 71·8% and the specificity was 95·5%. The median of the timeliness was 1 week (range: 0–4·5). Conclusions The method produced a robust and specific signal to detect influenza epidemics. The good balance between the sensitivity and specificity of the epidemic threshold to detect seasonal epidemics and avoid false alerts has advantages for public health purposes. This method may serve as standard to define the start of the annual influenza epidemic in countries in Europe.
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- 2012
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8. Sentinel surveillance for influenza and other respiratory viruses in Côte d’Ivoire, 2003–2010
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Joshua A. Mott, Daouda Coulibaly, Damus P. Kouassi, Kathleen Victoir, Edgard Valery Adjogoua, Mireille Carmen Bretin-Dosso, Gilbernair A. Elia, Chantal Akoua-Koffi, Ndahwouh Talla Nzussouo, Herve A. Kadjo, Bertin Kouakou, Abdoulaye Ouattara, and Euloge Ekaza
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Pulmonary and Respiratory Medicine ,Adult ,Male ,medicine.medical_specialty ,Adolescent ,Epidemiology ,viruses ,sentinel surveillance ,Cote d ivoire ,Part 1 ,Biology ,medicine.disease_cause ,Young Adult ,Vaccine strain ,respiratory viruses ,Influenza, Human ,Influenza A virus ,medicine ,Humans ,Respiratory system ,Child ,Respiratory Tract Infections ,Respiratory tract infections ,Côte d’Ivoire ,Public Health, Environmental and Occupational Health ,Respiratory pathogen ,virus diseases ,Infant ,Influenza a ,Original Articles ,Middle Aged ,Virology ,Influenza B virus ,Infectious Diseases ,Cote d'Ivoire ,Child, Preschool ,Viruses ,Original Article ,Female ,Seasons ,influenza viruses - Abstract
Background Many countries in Africa have lacked sentinel surveillance systems for influenza and are under-represented in data used for global vaccine strain selection. Objectives We describe 8 years of sentinel surveillance data and the contribution of influenza and other viruses to medically attended influenza-like illness (ILI) in Cote d’Ivoire. Methods Sentinel surveillance was established in 2003. Nasopharyngeal (NP) specimens and epidemiologic data are collected from persons of all ages presenting with ILI at sentinel sites. Respiratory specimens have been tested for influenza using various viral and molecular diagnostic methods. A subset of 470 specimens collected from children aged 0–5 years were tested for multiple respiratory viruses using RT-PCR. Results From 2003 to 2010, 5074 NP specimens were collected from patients with ILI. Overall, 969/5074 (19%) of these specimens tested positive for influenza. Seasonal influenza A(H1N1) viruses predominated during 5 years and influenza A(H3N2) viruses predominated during 3 years. Influenza B viruses cocirculated with influenza A viruses during each year from 2004 to 2010. Seasonal peaks in influenza circulation were observed during the months of May, June, and October, with the largest peak corresponding with the primary rainfall season. Of 470 specimens collected from children under aged 5 who were tested for multiple respiratory viruses, a viral respiratory pathogen was detected in 401/470 (85%) of specimens. Commonly detected viruses were RSV (113 of 470 specimens, 24%), rhinoviruses (85/470, 18%), influenza (77/470, 16%), and parainfluenza (75/470, 16%). Conclusion In Cote d’Ivoire, there is a significant annual contribution of influenza and other respiratory viruses to medically attended ILI.
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- 2012
9. Validity of clinical case definitions for influenza surveillance among hospitalized patients: results from a rural community in North India
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Sanjay K Rai, Kathryn E. Lafond, Renu B. Lal, Fatimah S. Dawood, Vivek Gupta, Joshua A. Mott, Rajan Wigh, Shobha Broor, Marc-Alain Widdowson, Anand Krishnan, and Akhilesh C. Mishra
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Pulmonary and Respiratory Medicine ,medicine.medical_specialty ,Epidemiology ,030231 tropical medicine ,Orthomyxoviridae ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,Throat ,medicine ,Sore throat ,030212 general & internal medicine ,Young adult ,Intensive care medicine ,Nose ,biology ,business.industry ,Public Health, Environmental and Occupational Health ,Respiratory infection ,biology.organism_classification ,medicine.disease ,respiratory tract diseases ,3. Good health ,Pneumonia ,Infectious Diseases ,medicine.anatomical_structure ,medicine.symptom ,business - Abstract
Objective: Clinical case definitions used for influenza surveillance among hospitalized patients vary and need systematic evaluation. Design, setting and sample: During July 2009–August 2011, we collected clinical data and specimens (nasal and throat swabs) from rural patients hospitalized for acute medical illnesses. Specimens were tested by rRT-PCR for influenza viruses. Main outcome measures: Case definitions evaluated the following: influenza-like illness (ILI: measured fever plus cough or sore throat); severe acute respiratory illness (SARI: ILI with difficulty breathing in ≥5 years, Integrated Management of Childhood Illness–defined pneumonia or severe pneumonia, or physician diagnosed lower respiratory infection in
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- 2012
10. Risk factors associated with fatal influenza, Romania, October 2009-May 2011
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Po-Yung Cheng, Caroline Brown, Alina Elena Ivanciuc, Adriana Pistol, Pernille Jorgensen, Diane Gross, Florin Popovici, Marc-Alain Widdowson, Laurentiu Zolotusca, Odette Popovici, Joshua A. Mott, and Viorel Alexandrescu
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Pulmonary and Respiratory Medicine ,Adult ,Male ,medicine.medical_specialty ,Multivariate analysis ,Adolescent ,Epidemiology ,Logistic regression ,Young Adult ,Influenza A Virus, H1N1 Subtype ,Pregnancy ,Risk Factors ,Internal medicine ,Pandemic ,Influenza, Human ,medicine ,Humans ,Young adult ,Risk factor ,Intensive care medicine ,Child ,Survival analysis ,Aged ,Retrospective Studies ,Aged, 80 and over ,business.industry ,Romania ,Public Health, Environmental and Occupational Health ,Infant, Newborn ,Infant ,Retrospective cohort study ,Short Articles ,Middle Aged ,Survival Analysis ,Influenza ,severe acute respiratory illness ,Vaccination ,Pregnancy Complications ,Infectious Diseases ,Child, Preschool ,surveillance ,Female ,business - Abstract
Background Limited data are available from Central and Eastern Europe on risk factors for severe complications of influenza. Such data are essential to prioritize prevention and treatment resources and to adapt influenza vaccination recommendations. Objectives To use sentinel surveillance data to identify risk factors for fatal outcomes among hospitalized patients with severe acute respiratory infections (SARI) and among hospitalized patients with laboratory-confirmed influenza. Methods Retrospective analysis of case-based surveillance data collected from sentinel hospitals in Romania during the 2009/2010 and 2010/2011 winter influenza seasons was performed to evaluate risk factors for fatal outcomes using multivariate logistic regression. Results During 2009/2010 and 2010/2011, sentinel hospitals reported 661 SARI patients of which 230 (35%) tested positive for influenza. In the multivariate analyses, infection with influenza A(H1N1)pdm09 was the strongest risk factor for death among hospitalized SARI patients (OR: 6·6; 95% CI: 3·3–13·1). Among patients positive for influenza A(H1N1)pdm09 virus infection (n = 148), being pregnant (OR: 7·1; 95% CI: 1·6–31·2), clinically obese (OR: 2·9;95% CI: 1·6–31·2), and having an immunocompromising condition (OR: 3·7;95% CI: 1·1–13·4) were significantly associated with fatal outcomes. Conclusion These findings are consistent with several other investigations of risk factors associated with influenza A(H1N1)pdm09 virus infections. They also support the more recent 2012 recommendations by the WHO Strategic Advisory Group of Experts on Immunization (SAGE) that pregnant women are an important risk group for influenza vaccination. Ongoing sentinel surveillance can be useful tool to monitor risk factors for complications of influenza virus infections during each influenza season, and pandemics as well.
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- 2013
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