1. Predictive immunogenetic markers in COVID-19.
- Author
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Leite MM, Gonzalez-Galarza FF, Silva BCCD, Middleton D, and Santos EJMD
- Subjects
- COVID-19 immunology, COVID-19 mortality, Cytokine Release Syndrome immunology, Cytokine Release Syndrome pathology, Gene Frequency genetics, Genetic Markers genetics, Humans, Interleukin-10 genetics, Interleukin-12 Subunit p40 genetics, Interleukin-6 genetics, Polymorphism, Single Nucleotide genetics, COVID-19 pathology, Cytokines genetics, HLA-B Antigens genetics, Receptors, KIR genetics, SARS-CoV-2 immunology
- Abstract
Immunorelevant genes are among the most probable modulators of coronavirus disease 2019 (COVID-19) progression and prognosis. However, in the few months of the pandemic, data generated on host genetics has been scarce. The present study retrieved data sets of HLA-B alleles, KIR genes and functional single nucleotide polymorphisms (SNPs) in cytokines related to COVID-19 cytokine storm from two publicly available databases: Allele Frequency Net Database and Ensembl, and correlated these frequency data with Case Fatality Rate (CFR) and Daily Death Rates (DDR) across countries. Correlations of eight HLA-B alleles and polymorphisms in three cytokine genes (IL6, IL10, and IL12B) were observed and were mainly associated with DDR. Additionally, HLA-B correlations suggest that differences in allele affinities to SARS-CoV-2 peptides are also associated with DDR. These results may provide rationale for future host genetic marker surveys on COVID-19., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2021 American Society for Histocompatibility and Immunogenetics. Published by Elsevier Inc. All rights reserved.)
- Published
- 2021
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