1. The Colonic Mucosal MicroRNAs, MicroRNA-219a-5p, and MicroRNA-338-3p Are Downregulated in Irritable Bowel Syndrome and Are Associated With Barrier Function and MAPK Signaling
- Author
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Ariela Khandadash, Lin Chang, Artin Soroosh, Charalabos Pothoulakis, Carl R. Rankin, Abhishek Verma, Elizabeth J. Videlock, Emeran A. Mayer, Swapna Mahurkar-Joshi, and Dimitrios Iliopoulos
- Subjects
0301 basic medicine ,MAPK/ERK pathway ,Male ,Oral and gastrointestinal ,Irritable Bowel Syndrome ,0302 clinical medicine ,2.1 Biological and endogenous factors ,Aetiology ,Intestinal Mucosa ,Irritable bowel syndrome ,Barrier function ,medicine.diagnostic_test ,Pain Research ,Gastroenterology ,miR-338-3p ,Middle Aged ,Diarrhea ,030211 gastroenterology & hepatology ,Female ,miR-219a-5p ,medicine.symptom ,Chronic Pain ,Biotechnology ,Adult ,Adolescent ,Colon ,MAP Kinase Signaling System ,Clinical Sciences ,TRPV1 ,Down-Regulation ,Permeability ,Article ,Paediatrics and Reproductive Medicine ,03 medical and health sciences ,Young Adult ,Biopsy ,microRNA ,medicine ,Genetics ,Humans ,Barrier Function ,miRNA ,Hepatology ,Gastroenterology & Hepatology ,business.industry ,Neurosciences ,medicine.disease ,MicroRNAs ,030104 developmental biology ,Tight junction protein 1 ,Case-Control Studies ,Cancer research ,MAPK Signaling ,business ,Digestive Diseases ,Constipation - Abstract
Background & aimsAlterations in microRNA (miRNA) and in the intestinal barrier are putative risk factors for irritable bowel syndrome (IBS). We aimed to identify differentially expressed colonic mucosal miRNAs, their targets in IBS compared to healthy controls (HCs), and putative downstream pathways.MethodsTwenty-nine IBS patients (15 IBS with constipation [IBS-C], 14 IBS with diarrhea [IBS-D]), and 15 age-matched HCs underwent sigmoidoscopy with biopsies. A nCounter array was used to assess biopsy specimen-associated miRNA levels. A false discovery rate (FDR) < 10% was considered significant. Real-time polymerase chain reaction (PCR) was used to validate differentially expressed genes. To assess barrier function, trans-epithelial electrical resistance (TEER) and dextran flux assays were performed on Caco-2 intestinal epithelial cells that were transfected with miRNA-inhibitors or control inhibitors. Protein expression of barrier function associated genes was confirmed using western blots.ResultsFour out of 247 miRNAs tested were differentially expressed in IBS compared to HCs (FDR < 10%). Real-time PCR validation suggested decreased levels of miR-219a-5p and miR-338-3p in IBS (P = .026 and P = .004), and IBS-C (P = .02 and P = .06) vs. HCs as the strongest associations. Inhibition of miR-219a-5p resulted in altered expression of proteasome/barrierfunction genes. Functionally, miR-219a-5p inhibition enhanced the permeability of intestinal epithelial cells as TEER was reduced (25-50%, P < .05) and dextran flux wasincreased (P < .01). Additionally, inhibition of miR-338-3p incells caused alterations in the mitogen-activated protein kinase (MAPK) signaling pathway genes.ConclusionTwomicroRNAs that potentially affect permeability and visceral nociception were identified to be altered in IBS patients. MiR-219a-5p and miR-338-3p potentially alter barrier function and visceral hypersensitivity via neuronal and MAPK signaling and could be therapeutic targets in IBS.
- Published
- 2020