1. Biodegradation of low-molecular-weight alkanes under mesophilic, sulfate-reducing conditions: metabolic intermediates and community patterns
- Author
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Jon Allen, R. Paul Philp, Kristen N. Savage, Lee R. Krumholz, Mostafa S. Elshahed, Victoria A. Parisi, Lisa M. Gieg, and Joseph M. Suflita
- Subjects
chemistry.chemical_classification ,Ecology ,biology ,Firmicutes ,Fatty acid ,Ribosomal RNA ,Biodegradation ,16S ribosomal RNA ,biology.organism_classification ,Deltaproteobacteria ,Applied Microbiology and Biotechnology ,Microbiology ,Chloroflexi (class) ,chemistry ,Biochemistry ,Sulfate-reducing bacteria - Abstract
We evaluated the ability of the native microbiota in a low-temperature, sulfidic natural hydrocarbon seep (Zodletone) to metabolize short-chain hydrocarbons. n-Propane and n-pentane were metabolized under sulfate-reducing conditions in initial enrichments and in sediment-free subcultures. Carbon isotope analysis of residual propane in active enrichments showed that propane became enriched in (13)C by 6.7 (+/-2.0) per thousand, indicating a biological mechanism for propane loss. The detection of n-propylsuccinic and isopropylsuccinic acids in active propane-degrading enrichments provided evidence for anaerobic biodegradation via a fumarate addition pathway. A eubacterial 16S rRNA gene survey of sediment-free enrichments showed that the majority of the sequenced clones were phylogenetically affiliated within the Deltaproteobacteria. Such sequences were most closely affiliated with clones retrieved from hydrocarbon-impacted marine ecosystems, volatile fatty acid metabolizers, hydrogen users, and with a novel Deltaproteobacterial lineage. Other cloned sequences were affiliated with the Firmicutes and Chloroflexi phyla. The sequenced clones were only distantly (
- Published
- 2010
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