1. Biochemical evidence for the interaction of regulatory subunit of cAMP-dependent protein kinase with IDA (Inter-DFG-APE) region of catalytic subunit
- Author
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Kiyotoshi Mori, Mamoru Aoto, Ayako Sato, Yasuo Fukami, Setsuko Sahara, Ken-ichi Sato, Alexander A. Tokmakov, and Hiroshi Kaise
- Subjects
Protein Folding ,Immunoprecipitation ,Protein Conformation ,Protein subunit ,Molecular Sequence Data ,Biophysics ,Coenzymes ,Peptide ,Biochemistry ,Catalysis ,Structure-Activity Relationship ,Structural Biology ,Subunit interaction ,hemic and lymphatic diseases ,Genetics ,Animals ,Amino Acid Sequence ,Binding site ,Protein kinase A ,Molecular Biology ,chemistry.chemical_classification ,cAMP-dependent protein kinase ,Kinase ,Substrate (chemistry) ,nutritional and metabolic diseases ,Antibodies, Monoclonal ,Cell Biology ,Cyclic AMP-Dependent Protein Kinases ,Peptide Fragments ,Rats ,Enzyme Activation ,Enzyme ,chemistry ,Cattle ,Rabbits ,Resonance mirror analysis - Abstract
To explore the structural basis required for the holoenzyme formation of cAMP-dependent protein kinase, we have prepared rabbit anti-peptide antibodies that can block the holoenzyme formation without affecting the catalytic activity of the enzyme. The antibodies were raised against a specific site in the catalytic (C)-subunit, termed IDA (Inter-DFG-APE) region, which lies between the kinase subdomains VII and VIII. Although the C-subunit immunoprecipitated with anti-IDA antibodies could not form a stable complex with regulatory (R)-subunit, it was still susceptible to inhibition by the R-subunit or by PKI, a specific inhibitor peptide containing a pseudosubstrate site. These results indicate that there exists an IDA regionmediated interaction between the R- and C-subunits, which is distinct from that mediated through the substrate site and substrate binding site. In accordance with this idea, association of synthetic IDA peptides with the R-subunit was directly demonstrated by resonance mirror analysis. The calculated association constants of IDA peptides were high enough to suggest a possible involvement of the IDA region in the initial step of holoenzyme formation.
- Published
- 1996